0.026767 0.000000 0.007458 0.000000 0.014743 0.000000 0.000000 0.000000 0.021147 0.00000 0.00000 0.00000 Han, S. Caspers, N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 105.57 90.00 37.360 67.830 49.090 C29 H33 N7 O2 511.618 3-{4-amino-1-[(3S)-1-propanoylpiperidin-3-yl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-[4-(propan-2-yl)phenyl]benzamide non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C N 6 N C N 7 N C Y 8 N C N 9 N C Y 10 N C N 11 N C N 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C N 23 N C N 24 N C N 25 S C N 26 N C N 27 N C N 28 N C N 29 N C Y 30 N N Y 31 N N Y 32 N N Y 33 N N N 34 N N N 35 N N N 36 N N N 37 N O N 38 N O N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N N N 73 S C N 74 N C N 75 N O N 76 N C N 77 N O N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C N 90 N C N 91 N C N 92 N N N 93 N C N 94 N N N 95 N N N 96 N O N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 S C N 114 N C N 115 N O N 116 N C N 117 N C N 118 N O N 119 N N N 120 N O N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 S C N 131 N C N 132 N O N 133 N C N 134 N C N 135 N O N 136 N O N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 R C N 147 N C N 148 N O N 149 N C N 150 N S N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 S C N 161 N C N 162 N O N 163 N C N 164 N C N 165 N C N 166 N O N 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N N N 180 S C N 181 N C N 182 N O N 183 N C N 184 N C N 185 N C N 186 N O N 187 N O N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 N C N 200 N C N 201 N O N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C Y 213 N C Y 214 N N Y 215 N C Y 216 N C Y 217 N N N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N O N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 S C N 237 N C N 238 N C N 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N C N 283 N C N 284 N N N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C N 306 N C N 307 N S N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C N 349 N C N 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N O N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 R C N 380 N O N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N N Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C N 430 N O N 431 N O N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C N 448 N C N 449 N C N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 1 N sing N 2 N sing N 3 N sing Y 4 N doub Y 5 N sing Y 6 N sing Y 7 N doub Y 8 N doub Y 9 N sing N 10 N sing N 11 N sing Y 12 N doub Y 13 N sing N 14 N sing N 15 N doub Y 16 N sing N 17 N sing Y 18 N doub N 19 N sing Y 20 N doub Y 21 N sing N 22 N sing N 23 N doub N 24 N sing Y 25 N doub Y 26 N sing Y 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing Y 32 N sing N 33 N sing Y 34 N doub Y 35 N sing N 36 N sing Y 37 N sing Y 38 N doub N 39 N sing N 40 N sing Y 41 N doub Y 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing Y 215 N sing Y 216 N doub Y 217 N doub N 218 N sing Y 219 N sing N 220 N sing Y 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N doub Y 324 N sing Y 325 N sing N 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing Y 392 N doub Y 393 N sing Y 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing Y 420 N doub Y 421 N sing Y 422 N sing N 423 N sing Y 424 N doub N 425 N sing Y 426 N doub N 427 N sing Y 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 55 10047 10063 10.1021/jm301190s 23098091 Covalent inhibitors of interleukin-2 inducible T cell kinase (itk) with nanomolar potency in a whole-blood assay. 2012 10.2210/pdb4hcv/pdb pdb_00004hcv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 PIXEL 2010-09-01 DECTRIS PILATUS 6M mirror SINGLE WAVELENGTH M x-ray 1 1.0 1.0 17-ID APS 1.0 SYNCHROTRON APS BEAMLINE 17-ID 30649.004 Tyrosine-protein kinase ITK/TSK 2.7.10.2 Interleukin-2 Inducible T cell Kinase: unp residues 354-620 K596R 1 man polymer 511.618 3-{4-amino-1-[(3S)-1-propanoylpiperidin-3-yl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-[4-(propan-2-yl)phenyl]benzamide 1 syn non-polymer 18.015 water 166 nat water Interleukin-2-inducible T-cell kinase, IL-2-inducible T-cell kinase, Kinase EMT, T-cell-specific kinase, Tyrosine-protein kinase Lyk no no GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM NHCWRERPEDRPAFSRLLRQLAEIAESGL GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIM NHCWRERPEDRPAFSRLLRQLAEIAESGL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample ITK, EMT, LYK 9606 Homo sapiens 7108 Spodoptera frugiperda 1 1.95 37.08 VAPOR DIFFUSION, HANGING DROP 7.2 12% PEG3350, 0.1M Mg acetate, 0.1M Hepes , pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 chem_comp_atom chem_comp_bond database_2 software struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2012-11-14 1 1 2013-01-02 1 2 2024-03-06 _database_2.pdbx_DOI _database_2.pdbx_database_accession _software.name _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-10-01 REL REL 13J 3-{4-amino-1-[(3S)-1-propanoylpiperidin-3-yl]-1H-pyrazolo[3,4-d]pyrimidin-3-yl}-N-[4-(propan-2-yl)phenyl]benzamide HOH water PFE 999 2 13J 13J 701 A HOH 1 3 HOH HOH 801 A HOH 2 3 HOH HOH 802 A HOH 3 3 HOH HOH 803 A HOH 4 3 HOH HOH 804 A HOH 5 3 HOH HOH 805 A HOH 6 3 HOH HOH 806 A HOH 7 3 HOH HOH 807 A HOH 8 3 HOH HOH 808 A HOH 9 3 HOH HOH 809 A HOH 10 3 HOH HOH 810 A HOH 11 3 HOH HOH 811 A HOH 12 3 HOH HOH 812 A HOH 13 3 HOH HOH 813 A HOH 14 3 HOH HOH 814 A HOH 15 3 HOH HOH 815 A HOH 16 3 HOH HOH 816 A HOH 17 3 HOH HOH 817 A HOH 18 3 HOH HOH 818 A HOH 19 3 HOH HOH 819 A HOH 20 3 HOH HOH 820 A HOH 21 3 HOH HOH 821 A HOH 22 3 HOH HOH 822 A HOH 23 3 HOH HOH 823 A HOH 24 3 HOH HOH 824 A HOH 25 3 HOH HOH 825 A HOH 26 3 HOH HOH 826 A HOH 27 3 HOH HOH 827 A HOH 28 3 HOH HOH 828 A HOH 29 3 HOH HOH 829 A HOH 30 3 HOH HOH 830 A HOH 31 3 HOH HOH 831 A HOH 32 3 HOH HOH 832 A HOH 33 3 HOH HOH 833 A HOH 34 3 HOH HOH 834 A HOH 35 3 HOH HOH 835 A HOH 36 3 HOH HOH 836 A HOH 37 3 HOH HOH 837 A HOH 38 3 HOH HOH 838 A HOH 39 3 HOH HOH 839 A HOH 40 3 HOH HOH 840 A HOH 41 3 HOH HOH 841 A HOH 42 3 HOH HOH 842 A HOH 44 3 HOH HOH 843 A HOH 45 3 HOH HOH 844 A HOH 46 3 HOH HOH 845 A HOH 47 3 HOH HOH 846 A HOH 48 3 HOH HOH 847 A HOH 49 3 HOH HOH 848 A HOH 50 3 HOH HOH 849 A HOH 51 3 HOH HOH 850 A HOH 52 3 HOH HOH 851 A HOH 53 3 HOH HOH 852 A HOH 54 3 HOH HOH 853 A HOH 55 3 HOH HOH 854 A HOH 56 3 HOH HOH 855 A HOH 57 3 HOH HOH 856 A HOH 58 3 HOH HOH 857 A HOH 59 3 HOH HOH 858 A HOH 60 3 HOH HOH 859 A HOH 61 3 HOH HOH 860 A HOH 63 3 HOH HOH 861 A HOH 64 3 HOH HOH 862 A HOH 65 3 HOH HOH 863 A HOH 66 3 HOH HOH 864 A HOH 67 3 HOH HOH 865 A HOH 68 3 HOH HOH 866 A HOH 69 3 HOH HOH 867 A HOH 70 3 HOH HOH 868 A HOH 71 3 HOH HOH 869 A HOH 72 3 HOH HOH 870 A HOH 73 3 HOH HOH 871 A HOH 74 3 HOH HOH 872 A HOH 75 3 HOH HOH 873 A HOH 76 3 HOH HOH 874 A HOH 77 3 HOH HOH 875 A HOH 78 3 HOH HOH 876 A HOH 79 3 HOH HOH 877 A HOH 80 3 HOH HOH 878 A HOH 81 3 HOH HOH 879 A HOH 82 3 HOH HOH 880 A HOH 83 3 HOH HOH 881 A HOH 84 3 HOH HOH 882 A HOH 85 3 HOH HOH 883 A HOH 86 3 HOH HOH 884 A HOH 87 3 HOH HOH 885 A HOH 88 3 HOH HOH 886 A HOH 89 3 HOH HOH 887 A HOH 90 3 HOH HOH 888 A HOH 91 3 HOH HOH 889 A HOH 92 3 HOH HOH 890 A HOH 93 3 HOH HOH 891 A HOH 94 3 HOH HOH 892 A HOH 95 3 HOH HOH 893 A HOH 96 3 HOH HOH 894 A HOH 97 3 HOH HOH 895 A HOH 98 3 HOH HOH 896 A HOH 99 3 HOH HOH 897 A HOH 100 3 HOH HOH 898 A HOH 101 3 HOH HOH 899 A HOH 102 3 HOH HOH 900 A HOH 103 3 HOH HOH 901 A HOH 104 3 HOH HOH 902 A HOH 105 3 HOH HOH 903 A HOH 106 3 HOH HOH 904 A HOH 107 3 HOH HOH 905 A HOH 108 3 HOH HOH 906 A HOH 109 3 HOH HOH 907 A HOH 110 3 HOH HOH 908 A HOH 111 3 HOH HOH 909 A HOH 112 3 HOH HOH 910 A HOH 113 3 HOH HOH 911 A HOH 114 3 HOH HOH 912 A HOH 115 3 HOH HOH 913 A HOH 116 3 HOH HOH 914 A HOH 117 3 HOH HOH 915 A HOH 118 3 HOH HOH 916 A HOH 119 3 HOH HOH 917 A HOH 120 3 HOH HOH 918 A HOH 121 3 HOH HOH 919 A HOH 122 3 HOH HOH 920 A HOH 123 3 HOH HOH 921 A HOH 124 3 HOH HOH 922 A HOH 125 3 HOH HOH 923 A HOH 126 3 HOH HOH 924 A HOH 127 3 HOH HOH 925 A HOH 128 3 HOH HOH 926 A HOH 129 3 HOH HOH 927 A HOH 130 3 HOH HOH 928 A HOH 131 3 HOH HOH 929 A HOH 132 3 HOH HOH 930 A HOH 133 3 HOH HOH 931 A HOH 134 3 HOH HOH 932 A HOH 135 3 HOH HOH 933 A HOH 136 3 HOH HOH 934 A HOH 137 3 HOH HOH 935 A HOH 139 3 HOH HOH 936 A HOH 141 3 HOH HOH 937 A HOH 142 3 HOH HOH 938 A HOH 143 3 HOH HOH 939 A HOH 144 3 HOH HOH 940 A HOH 145 3 HOH HOH 941 A HOH 146 3 HOH HOH 942 A HOH 147 3 HOH HOH 943 A HOH 148 3 HOH HOH 944 A HOH 149 3 HOH HOH 945 A HOH 150 3 HOH HOH 946 A HOH 151 3 HOH HOH 947 A HOH 152 3 HOH HOH 948 A HOH 153 3 HOH HOH 949 A HOH 154 3 HOH HOH 950 A HOH 155 3 HOH HOH 951 A HOH 156 3 HOH HOH 952 A HOH 157 3 HOH HOH 953 A HOH 158 3 HOH HOH 954 A HOH 159 3 HOH HOH 955 A HOH 160 3 HOH HOH 956 A HOH 161 3 HOH HOH 957 A HOH 162 3 HOH HOH 958 A HOH 163 3 HOH HOH 959 A HOH 164 3 HOH HOH 960 A HOH 165 3 HOH HOH 961 A HOH 166 3 HOH HOH 962 A HOH 167 3 HOH HOH 963 A HOH 168 3 HOH HOH 964 A HOH 169 3 HOH HOH 965 A HOH 170 3 HOH HOH 966 A n 1 352 A n 2 353 A n 3 354 A n 4 355 A TRP 356 n 5 TRP 356 A VAL 357 n 6 VAL 357 A ILE 358 n 7 ILE 358 A ASP 359 n 8 ASP 359 A PRO 360 n 9 PRO 360 A SER 361 n 10 SER 361 A GLU 362 n 11 GLU 362 A LEU 363 n 12 LEU 363 A THR 364 n 13 THR 364 A PHE 365 n 14 PHE 365 A VAL 366 n 15 VAL 366 A GLN 367 n 16 GLN 367 A GLU 368 n 17 GLU 368 A ILE 369 n 18 ILE 369 A GLY 370 n 19 GLY 370 A SER 371 n 20 SER 371 A GLY 372 n 21 GLY 372 A GLN 373 n 22 GLN 373 A PHE 374 n 23 PHE 374 A GLY 375 n 24 GLY 375 A LEU 376 n 25 LEU 376 A VAL 377 n 26 VAL 377 A HIS 378 n 27 HIS 378 A LEU 379 n 28 LEU 379 A GLY 380 n 29 GLY 380 A TYR 381 n 30 TYR 381 A TRP 382 n 31 TRP 382 A LEU 383 n 32 LEU 383 A ASN 384 n 33 ASN 384 A LYS 385 n 34 LYS 385 A ASP 386 n 35 ASP 386 A LYS 387 n 36 LYS 387 A VAL 388 n 37 VAL 388 A ALA 389 n 38 ALA 389 A ILE 390 n 39 ILE 390 A LYS 391 n 40 LYS 391 A THR 392 n 41 THR 392 A ILE 393 n 42 ILE 393 A ARG 394 n 43 ARG 394 A GLU 395 n 44 GLU 395 A GLY 396 n 45 GLY 396 A ALA 397 n 46 ALA 397 A MET 398 n 47 MET 398 A SER 399 n 48 SER 399 A GLU 400 n 49 GLU 400 A GLU 401 n 50 GLU 401 A ASP 402 n 51 ASP 402 A PHE 403 n 52 PHE 403 A ILE 404 n 53 ILE 404 A GLU 405 n 54 GLU 405 A GLU 406 n 55 GLU 406 A ALA 407 n 56 ALA 407 A GLU 408 n 57 GLU 408 A VAL 409 n 58 VAL 409 A MET 410 n 59 MET 410 A MET 411 n 60 MET 411 A LYS 412 n 61 LYS 412 A LEU 413 n 62 LEU 413 A SER 414 n 63 SER 414 A HIS 415 n 64 HIS 415 A PRO 416 n 65 PRO 416 A LYS 417 n 66 LYS 417 A LEU 418 n 67 LEU 418 A VAL 419 n 68 VAL 419 A GLN 420 n 69 GLN 420 A LEU 421 n 70 LEU 421 A TYR 422 n 71 TYR 422 A GLY 423 n 72 GLY 423 A VAL 424 n 73 VAL 424 A CYS 425 n 74 CYS 425 A LEU 426 n 75 LEU 426 A GLU 427 n 76 GLU 427 A GLN 428 n 77 GLN 428 A ALA 429 n 78 ALA 429 A PRO 430 n 79 PRO 430 A ILE 431 n 80 ILE 431 A CYS 432 n 81 CYS 432 A LEU 433 n 82 LEU 433 A VAL 434 n 83 VAL 434 A PHE 435 n 84 PHE 435 A GLU 436 n 85 GLU 436 A PHE 437 n 86 PHE 437 A MET 438 n 87 MET 438 A GLU 439 n 88 GLU 439 A HIS 440 n 89 HIS 440 A GLY 441 n 90 GLY 441 A CYS 442 n 91 CYS 442 A LEU 443 n 92 LEU 443 A SER 444 n 93 SER 444 A ASP 445 n 94 ASP 445 A TYR 446 n 95 TYR 446 A LEU 447 n 96 LEU 447 A ARG 448 n 97 ARG 448 A THR 449 n 98 THR 449 A GLN 450 n 99 GLN 450 A ARG 451 n 100 ARG 451 A GLY 452 n 101 GLY 452 A LEU 453 n 102 LEU 453 A PHE 454 n 103 PHE 454 A ALA 455 n 104 ALA 455 A ALA 456 n 105 ALA 456 A GLU 457 n 106 GLU 457 A THR 458 n 107 THR 458 A LEU 459 n 108 LEU 459 A LEU 460 n 109 LEU 460 A GLY 461 n 110 GLY 461 A MET 462 n 111 MET 462 A CYS 463 n 112 CYS 463 A LEU 464 n 113 LEU 464 A ASP 465 n 114 ASP 465 A VAL 466 n 115 VAL 466 A CYS 467 n 116 CYS 467 A GLU 468 n 117 GLU 468 A GLY 469 n 118 GLY 469 A MET 470 n 119 MET 470 A ALA 471 n 120 ALA 471 A TYR 472 n 121 TYR 472 A LEU 473 n 122 LEU 473 A GLU 474 n 123 GLU 474 A GLU 475 n 124 GLU 475 A ALA 476 n 125 ALA 476 A CYS 477 n 126 CYS 477 A VAL 478 n 127 VAL 478 A ILE 479 n 128 ILE 479 A HIS 480 n 129 HIS 480 A ARG 481 n 130 ARG 481 A ASP 482 n 131 ASP 482 A LEU 483 n 132 LEU 483 A ALA 484 n 133 ALA 484 A ALA 485 n 134 ALA 485 A ARG 486 n 135 ARG 486 A ASN 487 n 136 ASN 487 A CYS 488 n 137 CYS 488 A LEU 489 n 138 LEU 489 A VAL 490 n 139 VAL 490 A GLY 491 n 140 GLY 491 A GLU 492 n 141 GLU 492 A ASN 493 n 142 ASN 493 A GLN 494 n 143 GLN 494 A VAL 495 n 144 VAL 495 A ILE 496 n 145 ILE 496 A LYS 497 n 146 LYS 497 A VAL 498 n 147 VAL 498 A SER 499 n 148 SER 499 A ASP 500 n 149 ASP 500 A PHE 501 n 150 PHE 501 A GLY 502 n 151 GLY 502 A MET 503 n 152 MET 503 A THR 504 n 153 THR 504 A ARG 505 n 154 ARG 505 A PHE 506 n 155 PHE 506 A VAL 507 n 156 VAL 507 A LEU 508 n 157 LEU 508 A ASP 509 n 158 ASP 509 A ASP 510 n 159 ASP 510 A GLN 511 n 160 GLN 511 A TYR 512 n 161 TYR 512 A THR 513 n 162 THR 513 A SER 514 n 163 SER 514 A SER 515 n 164 SER 515 A THR 516 n 165 THR 516 A GLY 517 n 166 GLY 517 A THR 518 n 167 THR 518 A LYS 519 n 168 LYS 519 A PHE 520 n 169 PHE 520 A PRO 521 n 170 PRO 521 A VAL 522 n 171 VAL 522 A LYS 523 n 172 LYS 523 A TRP 524 n 173 TRP 524 A ALA 525 n 174 ALA 525 A SER 526 n 175 SER 526 A PRO 527 n 176 PRO 527 A GLU 528 n 177 GLU 528 A VAL 529 n 178 VAL 529 A PHE 530 n 179 PHE 530 A SER 531 n 180 SER 531 A PHE 532 n 181 PHE 532 A SER 533 n 182 SER 533 A ARG 534 n 183 ARG 534 A TYR 535 n 184 TYR 535 A SER 536 n 185 SER 536 A SER 537 n 186 SER 537 A LYS 538 n 187 LYS 538 A SER 539 n 188 SER 539 A ASP 540 n 189 ASP 540 A VAL 541 n 190 VAL 541 A TRP 542 n 191 TRP 542 A SER 543 n 192 SER 543 A PHE 544 n 193 PHE 544 A GLY 545 n 194 GLY 545 A VAL 546 n 195 VAL 546 A LEU 547 n 196 LEU 547 A MET 548 n 197 MET 548 A TRP 549 n 198 TRP 549 A GLU 550 n 199 GLU 550 A VAL 551 n 200 VAL 551 A PHE 552 n 201 PHE 552 A SER 553 n 202 SER 553 A GLU 554 n 203 GLU 554 A GLY 555 n 204 GLY 555 A LYS 556 n 205 LYS 556 A ILE 557 n 206 ILE 557 A PRO 558 n 207 PRO 558 A TYR 559 n 208 TYR 559 A GLU 560 n 209 GLU 560 A ASN 561 n 210 ASN 561 A ARG 562 n 211 ARG 562 A SER 563 n 212 SER 563 A ASN 564 n 213 ASN 564 A SER 565 n 214 SER 565 A GLU 566 n 215 GLU 566 A VAL 567 n 216 VAL 567 A VAL 568 n 217 VAL 568 A GLU 569 n 218 GLU 569 A ASP 570 n 219 ASP 570 A ILE 571 n 220 ILE 571 A SER 572 n 221 SER 572 A THR 573 n 222 THR 573 A GLY 574 n 223 GLY 574 A PHE 575 n 224 PHE 575 A ARG 576 n 225 ARG 576 A LEU 577 n 226 LEU 577 A TYR 578 n 227 TYR 578 A LYS 579 n 228 LYS 579 A PRO 580 n 229 PRO 580 A ARG 581 n 230 ARG 581 A LEU 582 n 231 LEU 582 A ALA 583 n 232 ALA 583 A SER 584 n 233 SER 584 A THR 585 n 234 THR 585 A HIS 586 n 235 HIS 586 A VAL 587 n 236 VAL 587 A TYR 588 n 237 TYR 588 A GLN 589 n 238 GLN 589 A ILE 590 n 239 ILE 590 A MET 591 n 240 MET 591 A ASN 592 n 241 ASN 592 A HIS 593 n 242 HIS 593 A CYS 594 n 243 CYS 594 A TRP 595 n 244 TRP 595 A ARG 596 n 245 ARG 596 A GLU 597 n 246 GLU 597 A ARG 598 n 247 ARG 598 A PRO 599 n 248 PRO 599 A GLU 600 n 249 GLU 600 A ASP 601 n 250 ASP 601 A ARG 602 n 251 ARG 602 A PRO 603 n 252 PRO 603 A ALA 604 n 253 ALA 604 A PHE 605 n 254 PHE 605 A SER 606 n 255 SER 606 A ARG 607 n 256 ARG 607 A LEU 608 n 257 LEU 608 A LEU 609 n 258 LEU 609 A ARG 610 n 259 ARG 610 A GLN 611 n 260 GLN 611 A LEU 612 n 261 LEU 612 A ALA 613 n 262 ALA 613 A GLU 614 n 263 GLU 614 A ILE 615 n 264 ILE 615 A ALA 616 n 265 ALA 616 A GLU 617 n 266 GLU 617 A SER 618 n 267 SER 618 A n 268 619 A n 269 620 A 0.1620 -0.0560 -0.0323 0.3889 0.0622 0.8042 -0.0009 0.0051 0.0064 0.0196 -0.0075 0.0001 -0.0024 0.0208 0.0085 -0.0159 -0.0032 -0.0084 -0.0226 0.0090 0.0043 refined 4.5964 2.6796 10.7714 X-RAY DIFFRACTION A 356 A 618 X-RAY DIFFRACTION 1 { A|356 - A|618 } author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLY 370 A N GLY 19 A O VAL 377 A O VAL 26 A N HIS 378 A N HIS 27 A O ILE 390 A O ILE 39 A N ALA 389 A N ALA 38 A O PHE 435 A O PHE 84 A O VAL 434 A O VAL 83 A N TYR 422 A N TYR 71 A N LEU 489 A N LEU 138 A O LYS 497 A O LYS 146 1 A GLY 352 A GLY 1 1 Y 1 A SER 353 A SER 2 1 Y 1 A GLY 354 A GLY 3 1 Y 1 A LYS 355 A LYS 4 1 Y 1 A GLY 619 A GLY 268 1 Y 1 A LEU 620 A LEU 269 1 Y 1 A PHE 374 108.53 -22.96 1 A LYS 385 -122.90 -83.76 1 A ASP 386 -170.62 -177.38 1 A ARG 481 85.01 -27.11 1 A ASP 482 -145.90 49.79 19.11 -4.0146 0.0000 -0.9053 2.3055 0.0000 1.7091 0.9508 0.9473 0.1861 0.1695 0.1703 1.48 20.78 1842 36772 5.01 93.46 0.074 RANDOM 1 THROUGHOUT 0.0 FOURIER SYNTHESIS Engh & Huber 0.177 1.48 20.78 166 2318 38 0 2114 0.010 2207 HARMONIC 2.00 1.06 2986 HARMONIC 2.00 3.84 16.05 0.1794 0.1707 0.1711 1.52 124 2325 2449 18 5.06 93.46 16.02 1.48 38.79 4HCV 124061 36806 0 0 1 93.8 1.482 1.486 1 70.0 data collection autoPROC phasing PHASER refinement BUSTER 2.11.2 data scaling autoPROC data scaling SCALA Crystal structure of ITK in complex with compound 53 1 N N 2 N N 3 N N A ASP 359 A ASP 8 HELX_P A SER 361 A SER 10 5 1 3 A SER 399 A SER 48 HELX_P A LEU 413 A LEU 62 1 2 15 A CYS 442 A CYS 91 HELX_P A GLN 450 A GLN 99 1 3 9 A ALA 455 A ALA 104 HELX_P A ALA 476 A ALA 125 1 4 22 A ALA 484 A ALA 133 HELX_P A ARG 486 A ARG 135 5 5 3 A GLU 492 A GLU 141 HELX_P A GLN 494 A GLN 143 5 6 3 A GLY 502 A GLY 151 HELX_P A VAL 507 A VAL 156 5 7 6 A ASP 509 A ASP 158 HELX_P A SER 514 A SER 163 1 8 6 A PRO 521 A PRO 170 HELX_P A ALA 525 A ALA 174 5 9 5 A SER 526 A SER 175 HELX_P A SER 533 A SER 182 1 10 8 A SER 536 A SER 185 HELX_P A SER 553 A SER 202 1 11 18 A SER 563 A SER 212 HELX_P A THR 573 A THR 222 1 12 11 A SER 584 A SER 233 HELX_P A TRP 595 A TRP 244 1 13 12 A ARG 598 A ARG 247 HELX_P A ARG 602 A ARG 251 5 14 5 A ALA 604 A ALA 253 HELX_P A SER 618 A SER 267 1 15 15 covale 1.849 none A CYS 442 A SG CYS 91 1_555 A 13J 701 B C25 13J 1_555 transferase/transferase inhibitor kinase, transferase-transferase inhibitor complex A ALA 429 A ALA 78 1 A PRO 430 A PRO 79 0.11 ITK_HUMAN UNP 1 354 Q08881 GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH CWKERPEDRPAFSRLLRQLAEIAESGL 354 620 4HCV 354 620 Q08881 A 1 3 269 1 expression tag GLY 352 4HCV A Q08881 UNP 1 1 expression tag SER 353 4HCV A Q08881 UNP 2 1 LYS engineered mutation ARG 596 4HCV A Q08881 UNP 596 245 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 363 A LEU 12 A GLY 372 A GLY 21 A GLY 375 A GLY 24 A TRP 382 A TRP 31 A ASP 386 A ASP 35 A ILE 393 A ILE 42 A CYS 432 A CYS 81 A GLU 436 A GLU 85 A LEU 421 A LEU 70 A CYS 425 A CYS 74 A CYS 488 A CYS 137 A VAL 490 A VAL 139 A ILE 496 A ILE 145 A VAL 498 A VAL 147 BINDING SITE FOR RESIDUE 13J A 701 A 13J 701 Software 15 A ILE 369 A ILE 18 15 1_555 A PHE 374 A PHE 23 15 1_555 A ALA 389 A ALA 38 15 1_555 A LYS 391 A LYS 40 15 1_555 A ILE 393 A ILE 42 15 1_555 A PHE 435 A PHE 84 15 1_555 A GLU 436 A GLU 85 15 1_555 A MET 438 A MET 87 15 1_555 A CYS 442 A CYS 91 15 1_555 A ASP 445 A ASP 94 15 1_555 A LEU 489 A LEU 138 15 1_555 A ASP 500 A ASP 149 15 1_555 A MET 503 A MET 152 15 1_555 A HOH 911 C HOH 15 1_555 A HOH 957 C HOH 15 1_555 4 P 1 21 1