0.023256
0.000000
0.003111
0.000000
0.023414
0.000000
0.000000
0.000000
0.008428
0.00000
0.00000
0.00000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
97.620
90.000
43.000
42.710
119.710
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal structure of an uncharacterized protein (yncM) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution
10.2210/pdb4hfs/pdb
pdb_00004hfs
100
1
KOHZU: Double Crystal Si(111)
CCD
2012-09-19
ADSC QUANTUM 315
Double Crystal Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.979122
1.0
8.2.2
ALS
0.979122
SYNCHROTRON
ALS BEAMLINE 8.2.2
23102.338
Uncharacterized protein YncM
2
man
polymer
96.063
SULFATE ION
4
syn
non-polymer
18.015
water
501
nat
water
no
yes
GADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPL
(MSE)KVGSKNEETYIEGKDKFTYNKGFRPGSTVQ(MSE)TIYKNLSGNTR(MSE)TLWGTNNDGYTGRIITEIQGTNIG
TISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAGNNVTISVNK
GADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLM
KVGSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTRMTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAV
SYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAGNNVTISVNK
A,B
JCSG-418961
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
168
sample
BSU17690, NP_389652.1, yncM
224308
Bacillus subtilis subsp. subtilis
562
Escherichia coli
PB1
Plasmid
SpeedET
1
2.36
47.84
VAPOR DIFFUSION, SITTING DROP
0.20M ammonium sulfate, 30.00% polyethylene glycol 4000, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
Joint Center for Structural Genomics
JCSG
PSI:Biology
diffrn_radiation
software
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Refinement description
Database references
Derived calculations
1
0
2012-12-05
1
1
2017-11-15
1
2
2023-02-01
_diffrn_radiation.pdbx_diffrn_protocol
_software.classification
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2012-10-05
REL
REL
SO4
SULFATE ION
HOH
water
THE CONSTRUCT (40-250) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
SO4
253
2
SO4
SO4
301
A
SO4
254
2
SO4
SO4
302
A
SO4
251
2
SO4
SO4
301
B
SO4
252
2
SO4
SO4
302
B
HOH
256
3
HOH
HOH
401
A
HOH
257
3
HOH
HOH
402
A
HOH
258
3
HOH
HOH
403
A
HOH
260
3
HOH
HOH
404
A
HOH
261
3
HOH
HOH
405
A
HOH
264
3
HOH
HOH
406
A
HOH
266
3
HOH
HOH
407
A
HOH
269
3
HOH
HOH
408
A
HOH
270
3
HOH
HOH
409
A
HOH
271
3
HOH
HOH
410
A
HOH
272
3
HOH
HOH
411
A
HOH
274
3
HOH
HOH
412
A
HOH
275
3
HOH
HOH
413
A
HOH
276
3
HOH
HOH
414
A
HOH
278
3
HOH
HOH
415
A
HOH
279
3
HOH
HOH
416
A
HOH
282
3
HOH
HOH
417
A
HOH
283
3
HOH
HOH
418
A
HOH
286
3
HOH
HOH
419
A
HOH
288
3
HOH
HOH
420
A
HOH
289
3
HOH
HOH
421
A
HOH
290
3
HOH
HOH
422
A
HOH
295
3
HOH
HOH
423
A
HOH
296
3
HOH
HOH
424
A
HOH
297
3
HOH
HOH
425
A
HOH
299
3
HOH
HOH
426
A
HOH
301
3
HOH
HOH
427
A
HOH
303
3
HOH
HOH
428
A
HOH
310
3
HOH
HOH
429
A
HOH
312
3
HOH
HOH
430
A
HOH
314
3
HOH
HOH
431
A
HOH
316
3
HOH
HOH
432
A
HOH
317
3
HOH
HOH
433
A
HOH
318
3
HOH
HOH
434
A
HOH
319
3
HOH
HOH
435
A
HOH
320
3
HOH
HOH
436
A
HOH
321
3
HOH
HOH
437
A
HOH
322
3
HOH
HOH
438
A
HOH
323
3
HOH
HOH
439
A
HOH
324
3
HOH
HOH
440
A
HOH
328
3
HOH
HOH
441
A
HOH
329
3
HOH
HOH
442
A
HOH
331
3
HOH
HOH
443
A
HOH
333
3
HOH
HOH
444
A
HOH
334
3
HOH
HOH
445
A
HOH
335
3
HOH
HOH
446
A
HOH
337
3
HOH
HOH
447
A
HOH
338
3
HOH
HOH
448
A
HOH
342
3
HOH
HOH
449
A
HOH
343
3
HOH
HOH
450
A
HOH
345
3
HOH
HOH
451
A
HOH
347
3
HOH
HOH
452
A
HOH
351
3
HOH
HOH
453
A
HOH
352
3
HOH
HOH
454
A
HOH
354
3
HOH
HOH
455
A
HOH
357
3
HOH
HOH
456
A
HOH
364
3
HOH
HOH
457
A
HOH
365
3
HOH
HOH
458
A
HOH
371
3
HOH
HOH
459
A
HOH
372
3
HOH
HOH
460
A
HOH
376
3
HOH
HOH
461
A
HOH
377
3
HOH
HOH
462
A
HOH
379
3
HOH
HOH
463
A
HOH
382
3
HOH
HOH
464
A
HOH
383
3
HOH
HOH
465
A
HOH
386
3
HOH
HOH
466
A
HOH
387
3
HOH
HOH
467
A
HOH
389
3
HOH
HOH
468
A
HOH
391
3
HOH
HOH
469
A
HOH
393
3
HOH
HOH
470
A
HOH
395
3
HOH
HOH
471
A
HOH
396
3
HOH
HOH
472
A
HOH
399
3
HOH
HOH
473
A
HOH
400
3
HOH
HOH
474
A
HOH
401
3
HOH
HOH
475
A
HOH
402
3
HOH
HOH
476
A
HOH
405
3
HOH
HOH
477
A
HOH
407
3
HOH
HOH
478
A
HOH
408
3
HOH
HOH
479
A
HOH
410
3
HOH
HOH
480
A
HOH
411
3
HOH
HOH
481
A
HOH
414
3
HOH
HOH
482
A
HOH
415
3
HOH
HOH
483
A
HOH
416
3
HOH
HOH
484
A
HOH
417
3
HOH
HOH
485
A
HOH
418
3
HOH
HOH
486
A
HOH
419
3
HOH
HOH
487
A
HOH
420
3
HOH
HOH
488
A
HOH
425
3
HOH
HOH
489
A
HOH
428
3
HOH
HOH
490
A
HOH
430
3
HOH
HOH
491
A
HOH
433
3
HOH
HOH
492
A
HOH
435
3
HOH
HOH
493
A
HOH
436
3
HOH
HOH
494
A
HOH
437
3
HOH
HOH
495
A
HOH
438
3
HOH
HOH
496
A
HOH
439
3
HOH
HOH
497
A
HOH
440
3
HOH
HOH
498
A
HOH
441
3
HOH
HOH
499
A
HOH
442
3
HOH
HOH
500
A
HOH
444
3
HOH
HOH
501
A
HOH
446
3
HOH
HOH
502
A
HOH
447
3
HOH
HOH
503
A
HOH
449
3
HOH
HOH
504
A
HOH
451
3
HOH
HOH
505
A
HOH
454
3
HOH
HOH
506
A
HOH
455
3
HOH
HOH
507
A
HOH
456
3
HOH
HOH
508
A
HOH
459
3
HOH
HOH
509
A
HOH
460
3
HOH
HOH
510
A
HOH
463
3
HOH
HOH
511
A
HOH
464
3
HOH
HOH
512
A
HOH
466
3
HOH
HOH
513
A
HOH
468
3
HOH
HOH
514
A
HOH
469
3
HOH
HOH
515
A
HOH
471
3
HOH
HOH
516
A
HOH
472
3
HOH
HOH
517
A
HOH
473
3
HOH
HOH
518
A
HOH
477
3
HOH
HOH
519
A
HOH
478
3
HOH
HOH
520
A
HOH
479
3
HOH
HOH
521
A
HOH
481
3
HOH
HOH
522
A
HOH
482
3
HOH
HOH
523
A
HOH
485
3
HOH
HOH
524
A
HOH
486
3
HOH
HOH
525
A
HOH
488
3
HOH
HOH
526
A
HOH
489
3
HOH
HOH
527
A
HOH
491
3
HOH
HOH
528
A
HOH
492
3
HOH
HOH
529
A
HOH
493
3
HOH
HOH
530
A
HOH
495
3
HOH
HOH
531
A
HOH
501
3
HOH
HOH
532
A
HOH
502
3
HOH
HOH
533
A
HOH
504
3
HOH
HOH
534
A
HOH
506
3
HOH
HOH
535
A
HOH
508
3
HOH
HOH
536
A
HOH
509
3
HOH
HOH
537
A
HOH
512
3
HOH
HOH
538
A
HOH
514
3
HOH
HOH
539
A
HOH
516
3
HOH
HOH
540
A
HOH
517
3
HOH
HOH
541
A
HOH
518
3
HOH
HOH
542
A
HOH
520
3
HOH
HOH
543
A
HOH
522
3
HOH
HOH
544
A
HOH
525
3
HOH
HOH
545
A
HOH
526
3
HOH
HOH
546
A
HOH
527
3
HOH
HOH
547
A
HOH
529
3
HOH
HOH
548
A
HOH
530
3
HOH
HOH
549
A
HOH
531
3
HOH
HOH
550
A
HOH
534
3
HOH
HOH
551
A
HOH
535
3
HOH
HOH
552
A
HOH
539
3
HOH
HOH
553
A
HOH
541
3
HOH
HOH
554
A
HOH
544
3
HOH
HOH
555
A
HOH
545
3
HOH
HOH
556
A
HOH
547
3
HOH
HOH
557
A
HOH
549
3
HOH
HOH
558
A
HOH
550
3
HOH
HOH
559
A
HOH
553
3
HOH
HOH
560
A
HOH
555
3
HOH
HOH
561
A
HOH
557
3
HOH
HOH
562
A
HOH
560
3
HOH
HOH
563
A
HOH
562
3
HOH
HOH
564
A
HOH
564
3
HOH
HOH
565
A
HOH
566
3
HOH
HOH
566
A
HOH
568
3
HOH
HOH
567
A
HOH
569
3
HOH
HOH
568
A
HOH
570
3
HOH
HOH
569
A
HOH
571
3
HOH
HOH
570
A
HOH
575
3
HOH
HOH
571
A
HOH
577
3
HOH
HOH
572
A
HOH
578
3
HOH
HOH
573
A
HOH
580
3
HOH
HOH
574
A
HOH
581
3
HOH
HOH
575
A
HOH
585
3
HOH
HOH
576
A
HOH
587
3
HOH
HOH
577
A
HOH
588
3
HOH
HOH
578
A
HOH
590
3
HOH
HOH
579
A
HOH
591
3
HOH
HOH
580
A
HOH
594
3
HOH
HOH
581
A
HOH
596
3
HOH
HOH
582
A
HOH
601
3
HOH
HOH
583
A
HOH
604
3
HOH
HOH
584
A
HOH
605
3
HOH
HOH
585
A
HOH
612
3
HOH
HOH
586
A
HOH
614
3
HOH
HOH
587
A
HOH
615
3
HOH
HOH
588
A
HOH
618
3
HOH
HOH
589
A
HOH
619
3
HOH
HOH
590
A
HOH
620
3
HOH
HOH
591
A
HOH
622
3
HOH
HOH
592
A
HOH
624
3
HOH
HOH
593
A
HOH
626
3
HOH
HOH
594
A
HOH
628
3
HOH
HOH
595
A
HOH
631
3
HOH
HOH
596
A
HOH
632
3
HOH
HOH
597
A
HOH
635
3
HOH
HOH
598
A
HOH
636
3
HOH
HOH
599
A
HOH
639
3
HOH
HOH
600
A
HOH
641
3
HOH
HOH
601
A
HOH
643
3
HOH
HOH
602
A
HOH
645
3
HOH
HOH
603
A
HOH
647
3
HOH
HOH
604
A
HOH
648
3
HOH
HOH
605
A
HOH
649
3
HOH
HOH
606
A
HOH
654
3
HOH
HOH
607
A
HOH
656
3
HOH
HOH
608
A
HOH
657
3
HOH
HOH
609
A
HOH
658
3
HOH
HOH
610
A
HOH
659
3
HOH
HOH
611
A
HOH
660
3
HOH
HOH
612
A
HOH
664
3
HOH
HOH
613
A
HOH
665
3
HOH
HOH
614
A
HOH
666
3
HOH
HOH
615
A
HOH
670
3
HOH
HOH
616
A
HOH
671
3
HOH
HOH
617
A
HOH
672
3
HOH
HOH
618
A
HOH
673
3
HOH
HOH
619
A
HOH
675
3
HOH
HOH
620
A
HOH
676
3
HOH
HOH
621
A
HOH
677
3
HOH
HOH
622
A
HOH
678
3
HOH
HOH
623
A
HOH
680
3
HOH
HOH
624
A
HOH
683
3
HOH
HOH
625
A
HOH
684
3
HOH
HOH
626
A
HOH
686
3
HOH
HOH
627
A
HOH
690
3
HOH
HOH
628
A
HOH
692
3
HOH
HOH
629
A
HOH
695
3
HOH
HOH
630
A
HOH
698
3
HOH
HOH
631
A
HOH
702
3
HOH
HOH
632
A
HOH
703
3
HOH
HOH
633
A
HOH
704
3
HOH
HOH
634
A
HOH
705
3
HOH
HOH
635
A
HOH
706
3
HOH
HOH
636
A
HOH
708
3
HOH
HOH
637
A
HOH
709
3
HOH
HOH
638
A
HOH
711
3
HOH
HOH
639
A
HOH
714
3
HOH
HOH
640
A
HOH
717
3
HOH
HOH
641
A
HOH
720
3
HOH
HOH
642
A
HOH
722
3
HOH
HOH
643
A
HOH
723
3
HOH
HOH
644
A
HOH
725
3
HOH
HOH
645
A
HOH
726
3
HOH
HOH
646
A
HOH
729
3
HOH
HOH
647
A
HOH
733
3
HOH
HOH
648
A
HOH
734
3
HOH
HOH
649
A
HOH
735
3
HOH
HOH
650
A
HOH
737
3
HOH
HOH
651
A
HOH
738
3
HOH
HOH
652
A
HOH
739
3
HOH
HOH
653
A
HOH
740
3
HOH
HOH
654
A
HOH
741
3
HOH
HOH
655
A
HOH
744
3
HOH
HOH
656
A
HOH
745
3
HOH
HOH
657
A
HOH
750
3
HOH
HOH
658
A
HOH
752
3
HOH
HOH
659
A
HOH
753
3
HOH
HOH
660
A
HOH
754
3
HOH
HOH
661
A
HOH
755
3
HOH
HOH
662
A
HOH
255
3
HOH
HOH
401
B
HOH
259
3
HOH
HOH
402
B
HOH
262
3
HOH
HOH
403
B
HOH
263
3
HOH
HOH
404
B
HOH
265
3
HOH
HOH
405
B
HOH
267
3
HOH
HOH
406
B
HOH
268
3
HOH
HOH
407
B
HOH
273
3
HOH
HOH
408
B
HOH
277
3
HOH
HOH
409
B
HOH
280
3
HOH
HOH
410
B
HOH
281
3
HOH
HOH
411
B
HOH
284
3
HOH
HOH
412
B
HOH
285
3
HOH
HOH
413
B
HOH
287
3
HOH
HOH
414
B
HOH
291
3
HOH
HOH
415
B
HOH
292
3
HOH
HOH
416
B
HOH
293
3
HOH
HOH
417
B
HOH
294
3
HOH
HOH
418
B
HOH
298
3
HOH
HOH
419
B
HOH
300
3
HOH
HOH
420
B
HOH
302
3
HOH
HOH
421
B
HOH
304
3
HOH
HOH
422
B
HOH
305
3
HOH
HOH
423
B
HOH
306
3
HOH
HOH
424
B
HOH
307
3
HOH
HOH
425
B
HOH
308
3
HOH
HOH
426
B
HOH
309
3
HOH
HOH
427
B
HOH
311
3
HOH
HOH
428
B
HOH
313
3
HOH
HOH
429
B
HOH
315
3
HOH
HOH
430
B
HOH
325
3
HOH
HOH
431
B
HOH
326
3
HOH
HOH
432
B
HOH
327
3
HOH
HOH
433
B
HOH
330
3
HOH
HOH
434
B
HOH
332
3
HOH
HOH
435
B
HOH
336
3
HOH
HOH
436
B
HOH
339
3
HOH
HOH
437
B
HOH
340
3
HOH
HOH
438
B
HOH
341
3
HOH
HOH
439
B
HOH
344
3
HOH
HOH
440
B
HOH
346
3
HOH
HOH
441
B
HOH
348
3
HOH
HOH
442
B
HOH
349
3
HOH
HOH
443
B
HOH
350
3
HOH
HOH
444
B
HOH
353
3
HOH
HOH
445
B
HOH
355
3
HOH
HOH
446
B
HOH
356
3
HOH
HOH
447
B
HOH
358
3
HOH
HOH
448
B
HOH
359
3
HOH
HOH
449
B
HOH
360
3
HOH
HOH
450
B
HOH
361
3
HOH
HOH
451
B
HOH
362
3
HOH
HOH
452
B
HOH
363
3
HOH
HOH
453
B
HOH
366
3
HOH
HOH
454
B
HOH
367
3
HOH
HOH
455
B
HOH
368
3
HOH
HOH
456
B
HOH
369
3
HOH
HOH
457
B
HOH
370
3
HOH
HOH
458
B
HOH
373
3
HOH
HOH
459
B
HOH
374
3
HOH
HOH
460
B
HOH
375
3
HOH
HOH
461
B
HOH
378
3
HOH
HOH
462
B
HOH
380
3
HOH
HOH
463
B
HOH
381
3
HOH
HOH
464
B
HOH
384
3
HOH
HOH
465
B
HOH
385
3
HOH
HOH
466
B
HOH
388
3
HOH
HOH
467
B
HOH
390
3
HOH
HOH
468
B
HOH
392
3
HOH
HOH
469
B
HOH
394
3
HOH
HOH
470
B
HOH
397
3
HOH
HOH
471
B
HOH
398
3
HOH
HOH
472
B
HOH
403
3
HOH
HOH
473
B
HOH
404
3
HOH
HOH
474
B
HOH
406
3
HOH
HOH
475
B
HOH
409
3
HOH
HOH
476
B
HOH
412
3
HOH
HOH
477
B
HOH
413
3
HOH
HOH
478
B
HOH
421
3
HOH
HOH
479
B
HOH
422
3
HOH
HOH
480
B
HOH
423
3
HOH
HOH
481
B
HOH
424
3
HOH
HOH
482
B
HOH
426
3
HOH
HOH
483
B
HOH
427
3
HOH
HOH
484
B
HOH
429
3
HOH
HOH
485
B
HOH
431
3
HOH
HOH
486
B
HOH
432
3
HOH
HOH
487
B
HOH
434
3
HOH
HOH
488
B
HOH
443
3
HOH
HOH
489
B
HOH
445
3
HOH
HOH
490
B
HOH
448
3
HOH
HOH
491
B
HOH
450
3
HOH
HOH
492
B
HOH
452
3
HOH
HOH
493
B
HOH
453
3
HOH
HOH
494
B
HOH
457
3
HOH
HOH
495
B
HOH
458
3
HOH
HOH
496
B
HOH
461
3
HOH
HOH
497
B
HOH
462
3
HOH
HOH
498
B
HOH
465
3
HOH
HOH
499
B
HOH
467
3
HOH
HOH
500
B
HOH
470
3
HOH
HOH
501
B
HOH
474
3
HOH
HOH
502
B
HOH
475
3
HOH
HOH
503
B
HOH
476
3
HOH
HOH
504
B
HOH
480
3
HOH
HOH
505
B
HOH
483
3
HOH
HOH
506
B
HOH
484
3
HOH
HOH
507
B
HOH
487
3
HOH
HOH
508
B
HOH
490
3
HOH
HOH
509
B
HOH
494
3
HOH
HOH
510
B
HOH
496
3
HOH
HOH
511
B
HOH
497
3
HOH
HOH
512
B
HOH
498
3
HOH
HOH
513
B
HOH
499
3
HOH
HOH
514
B
HOH
500
3
HOH
HOH
515
B
HOH
503
3
HOH
HOH
516
B
HOH
505
3
HOH
HOH
517
B
HOH
507
3
HOH
HOH
518
B
HOH
510
3
HOH
HOH
519
B
HOH
511
3
HOH
HOH
520
B
HOH
513
3
HOH
HOH
521
B
HOH
515
3
HOH
HOH
522
B
HOH
519
3
HOH
HOH
523
B
HOH
521
3
HOH
HOH
524
B
HOH
523
3
HOH
HOH
525
B
HOH
524
3
HOH
HOH
526
B
HOH
528
3
HOH
HOH
527
B
HOH
532
3
HOH
HOH
528
B
HOH
533
3
HOH
HOH
529
B
HOH
536
3
HOH
HOH
530
B
HOH
537
3
HOH
HOH
531
B
HOH
538
3
HOH
HOH
532
B
HOH
540
3
HOH
HOH
533
B
HOH
542
3
HOH
HOH
534
B
HOH
543
3
HOH
HOH
535
B
HOH
546
3
HOH
HOH
536
B
HOH
548
3
HOH
HOH
537
B
HOH
551
3
HOH
HOH
538
B
HOH
552
3
HOH
HOH
539
B
HOH
554
3
HOH
HOH
540
B
HOH
556
3
HOH
HOH
541
B
HOH
558
3
HOH
HOH
542
B
HOH
559
3
HOH
HOH
543
B
HOH
561
3
HOH
HOH
544
B
HOH
563
3
HOH
HOH
545
B
HOH
565
3
HOH
HOH
546
B
HOH
567
3
HOH
HOH
547
B
HOH
572
3
HOH
HOH
548
B
HOH
573
3
HOH
HOH
549
B
HOH
574
3
HOH
HOH
550
B
HOH
576
3
HOH
HOH
551
B
HOH
579
3
HOH
HOH
552
B
HOH
582
3
HOH
HOH
553
B
HOH
583
3
HOH
HOH
554
B
HOH
584
3
HOH
HOH
555
B
HOH
586
3
HOH
HOH
556
B
HOH
589
3
HOH
HOH
557
B
HOH
592
3
HOH
HOH
558
B
HOH
593
3
HOH
HOH
559
B
HOH
595
3
HOH
HOH
560
B
HOH
597
3
HOH
HOH
561
B
HOH
598
3
HOH
HOH
562
B
HOH
599
3
HOH
HOH
563
B
HOH
600
3
HOH
HOH
564
B
HOH
602
3
HOH
HOH
565
B
HOH
603
3
HOH
HOH
566
B
HOH
606
3
HOH
HOH
567
B
HOH
607
3
HOH
HOH
568
B
HOH
608
3
HOH
HOH
569
B
HOH
609
3
HOH
HOH
570
B
HOH
610
3
HOH
HOH
571
B
HOH
611
3
HOH
HOH
572
B
HOH
613
3
HOH
HOH
573
B
HOH
616
3
HOH
HOH
574
B
HOH
617
3
HOH
HOH
575
B
HOH
621
3
HOH
HOH
576
B
HOH
623
3
HOH
HOH
577
B
HOH
625
3
HOH
HOH
578
B
HOH
627
3
HOH
HOH
579
B
HOH
629
3
HOH
HOH
580
B
HOH
630
3
HOH
HOH
581
B
HOH
633
3
HOH
HOH
582
B
HOH
634
3
HOH
HOH
583
B
HOH
637
3
HOH
HOH
584
B
HOH
638
3
HOH
HOH
585
B
HOH
640
3
HOH
HOH
586
B
HOH
642
3
HOH
HOH
587
B
HOH
644
3
HOH
HOH
588
B
HOH
646
3
HOH
HOH
589
B
HOH
650
3
HOH
HOH
590
B
HOH
651
3
HOH
HOH
591
B
HOH
652
3
HOH
HOH
592
B
HOH
653
3
HOH
HOH
593
B
HOH
655
3
HOH
HOH
594
B
HOH
661
3
HOH
HOH
595
B
HOH
662
3
HOH
HOH
596
B
HOH
663
3
HOH
HOH
597
B
HOH
667
3
HOH
HOH
598
B
HOH
668
3
HOH
HOH
599
B
HOH
669
3
HOH
HOH
600
B
HOH
674
3
HOH
HOH
601
B
HOH
679
3
HOH
HOH
602
B
HOH
681
3
HOH
HOH
603
B
HOH
682
3
HOH
HOH
604
B
HOH
685
3
HOH
HOH
605
B
HOH
687
3
HOH
HOH
606
B
HOH
688
3
HOH
HOH
607
B
HOH
689
3
HOH
HOH
608
B
HOH
691
3
HOH
HOH
609
B
HOH
693
3
HOH
HOH
610
B
HOH
694
3
HOH
HOH
611
B
HOH
696
3
HOH
HOH
612
B
HOH
697
3
HOH
HOH
613
B
HOH
699
3
HOH
HOH
614
B
HOH
700
3
HOH
HOH
615
B
HOH
701
3
HOH
HOH
616
B
HOH
707
3
HOH
HOH
617
B
HOH
710
3
HOH
HOH
618
B
HOH
712
3
HOH
HOH
619
B
HOH
713
3
HOH
HOH
620
B
HOH
715
3
HOH
HOH
621
B
HOH
716
3
HOH
HOH
622
B
HOH
718
3
HOH
HOH
623
B
HOH
719
3
HOH
HOH
624
B
HOH
721
3
HOH
HOH
625
B
HOH
724
3
HOH
HOH
626
B
HOH
727
3
HOH
HOH
627
B
HOH
728
3
HOH
HOH
628
B
HOH
730
3
HOH
HOH
629
B
HOH
731
3
HOH
HOH
630
B
HOH
732
3
HOH
HOH
631
B
HOH
736
3
HOH
HOH
632
B
HOH
742
3
HOH
HOH
633
B
HOH
743
3
HOH
HOH
634
B
HOH
746
3
HOH
HOH
635
B
HOH
747
3
HOH
HOH
636
B
HOH
748
3
HOH
HOH
637
B
HOH
749
3
HOH
HOH
638
B
HOH
751
3
HOH
HOH
639
B
n
1
0
A
n
2
40
A
n
3
41
A
n
4
42
A
n
5
43
A
n
6
44
A
n
7
45
A
n
8
46
A
n
9
47
A
ALA
48
n
10
ALA
48
A
SER
49
n
11
SER
49
A
GLU
50
n
12
GLU
50
A
LEU
51
n
13
LEU
51
A
PRO
52
n
14
PRO
52
A
ASN
53
n
15
ASN
53
A
GLY
54
n
16
GLY
54
A
ILE
55
n
17
ILE
55
A
GLY
56
n
18
GLY
56
A
GLY
57
n
19
GLY
57
A
ARG
58
n
20
ARG
58
A
VAL
59
n
21
VAL
59
A
TYR
60
n
22
TYR
60
A
LEU
61
n
23
LEU
61
A
ASN
62
n
24
ASN
62
A
SER
63
n
25
SER
63
A
THR
64
n
26
THR
64
A
GLY
65
n
27
GLY
65
A
ALA
66
n
28
ALA
66
A
VAL
67
n
29
VAL
67
A
PHE
68
n
30
PHE
68
A
THR
69
n
31
THR
69
A
ALA
70
n
32
ALA
70
A
LYS
71
n
33
LYS
71
A
ILE
72
n
34
ILE
72
A
VAL
73
n
35
VAL
73
A
LEU
74
n
36
LEU
74
A
PRO
75
n
37
PRO
75
A
GLU
76
n
38
GLU
76
A
THR
77
n
39
THR
77
A
VAL
78
n
40
VAL
78
A
LYS
79
n
41
LYS
79
A
ASN
80
n
42
ASN
80
A
ASN
81
n
43
ASN
81
A
ASP
82
n
44
ASP
82
A
SER
83
n
45
SER
83
A
VAL
84
n
46
VAL
84
A
SER
85
n
47
SER
85
A
THR
86
n
48
THR
86
A
PRO
87
n
49
PRO
87
A
TYR
88
n
50
TYR
88
A
ILE
89
n
51
ILE
89
A
TYR
90
n
52
TYR
90
A
SER
91
n
53
SER
91
A
GLY
92
n
54
GLY
92
A
PHE
93
n
55
PHE
93
A
ARG
94
n
56
ARG
94
A
ALA
95
n
57
ALA
95
A
THR
96
n
58
THR
96
A
SER
97
n
59
SER
97
A
GLY
98
n
60
GLY
98
A
THR
99
n
61
THR
99
A
GLU
100
n
62
GLU
100
A
ALA
101
n
63
ALA
101
A
ASP
102
n
64
ASP
102
A
ILE
103
n
65
ILE
103
A
GLY
104
n
66
GLY
104
A
LEU
105
n
67
LEU
105
A
GLN
106
n
68
GLN
106
A
TYR
107
n
69
TYR
107
A
SER
108
n
70
SER
108
A
LYS
109
n
71
LYS
109
A
GLN
110
n
72
GLN
110
A
TYR
111
n
73
TYR
111
A
ASN
112
n
74
ASN
112
A
VAL
113
n
75
VAL
113
A
TRP
114
n
76
TRP
114
A
LYS
115
n
77
LYS
115
A
PRO
116
n
78
PRO
116
A
LEU
117
n
79
LEU
117
A
MSE
118
n
80
MSE
118
A
LYS
119
n
81
LYS
119
A
VAL
120
n
82
VAL
120
A
GLY
121
n
83
GLY
121
A
SER
122
n
84
SER
122
A
LYS
123
n
85
LYS
123
A
ASN
124
n
86
ASN
124
A
GLU
125
n
87
GLU
125
A
GLU
126
n
88
GLU
126
A
THR
127
n
89
THR
127
A
TYR
128
n
90
TYR
128
A
ILE
129
n
91
ILE
129
A
GLU
130
n
92
GLU
130
A
GLY
131
n
93
GLY
131
A
LYS
132
n
94
LYS
132
A
ASP
133
n
95
ASP
133
A
LYS
134
n
96
LYS
134
A
PHE
135
n
97
PHE
135
A
THR
136
n
98
THR
136
A
TYR
137
n
99
TYR
137
A
ASN
138
n
100
ASN
138
A
LYS
139
n
101
LYS
139
A
GLY
140
n
102
GLY
140
A
PHE
141
n
103
PHE
141
A
ARG
142
n
104
ARG
142
A
PRO
143
n
105
PRO
143
A
GLY
144
n
106
GLY
144
A
SER
145
n
107
SER
145
A
THR
146
n
108
THR
146
A
VAL
147
n
109
VAL
147
A
GLN
148
n
110
GLN
148
A
MSE
149
n
111
MSE
149
A
THR
150
n
112
THR
150
A
ILE
151
n
113
ILE
151
A
TYR
152
n
114
TYR
152
A
LYS
153
n
115
LYS
153
A
ASN
154
n
116
ASN
154
A
LEU
155
n
117
LEU
155
A
SER
156
n
118
SER
156
A
GLY
157
n
119
GLY
157
A
ASN
158
n
120
ASN
158
A
THR
159
n
121
THR
159
A
ARG
160
n
122
ARG
160
A
MSE
161
n
123
MSE
161
A
THR
162
n
124
THR
162
A
LEU
163
n
125
LEU
163
A
TRP
164
n
126
TRP
164
A
GLY
165
n
127
GLY
165
A
THR
166
n
128
THR
166
A
ASN
167
n
129
ASN
167
A
ASN
168
n
130
ASN
168
A
ASP
169
n
131
ASP
169
A
GLY
170
n
132
GLY
170
A
TYR
171
n
133
TYR
171
A
THR
172
n
134
THR
172
A
GLY
173
n
135
GLY
173
A
ARG
174
n
136
ARG
174
A
ILE
175
n
137
ILE
175
A
ILE
176
n
138
ILE
176
A
THR
177
n
139
THR
177
A
GLU
178
n
140
GLU
178
A
ILE
179
n
141
ILE
179
A
GLN
180
n
142
GLN
180
A
GLY
181
n
143
GLY
181
A
THR
182
n
144
THR
182
A
ASN
183
n
145
ASN
183
A
ILE
184
n
146
ILE
184
A
GLY
185
n
147
GLY
185
A
THR
186
n
148
THR
186
A
ILE
187
n
149
ILE
187
A
SER
188
n
150
SER
188
A
LYS
189
n
151
LYS
189
A
TRP
190
n
152
TRP
190
A
LYS
191
n
153
LYS
191
A
THR
192
n
154
THR
192
A
LEU
193
n
155
LEU
193
A
ALA
194
n
156
ALA
194
A
THR
195
n
157
THR
195
A
ALA
196
n
158
ALA
196
A
ALA
197
n
159
ALA
197
A
VAL
198
n
160
VAL
198
A
SER
199
n
161
SER
199
A
TYR
200
n
162
TYR
200
A
GLU
201
n
163
GLU
201
A
SER
202
n
164
SER
202
A
GLN
203
n
165
GLN
203
A
ARG
204
n
166
ARG
204
A
ASP
205
n
167
ASP
205
A
ALA
206
n
168
ALA
206
A
ILE
207
n
169
ILE
207
A
LYS
208
n
170
LYS
208
A
ALA
209
n
171
ALA
209
A
THR
210
n
172
THR
210
A
PHE
211
n
173
PHE
211
A
SER
212
n
174
SER
212
A
THR
213
n
175
THR
213
A
SER
214
n
176
SER
214
A
PHE
215
n
177
PHE
215
A
ASN
216
n
178
ASN
216
A
ASN
217
n
179
ASN
217
A
ILE
218
n
180
ILE
218
A
THR
219
n
181
THR
219
A
ILE
220
n
182
ILE
220
A
ASP
221
n
183
ASP
221
A
ASN
222
n
184
ASN
222
A
LYS
223
n
185
LYS
223
A
ALA
224
n
186
ALA
224
A
VAL
225
n
187
VAL
225
A
THR
226
n
188
THR
226
A
PRO
227
n
189
PRO
227
A
VAL
228
n
190
VAL
228
A
VAL
229
n
191
VAL
229
A
ASP
230
n
192
ASP
230
A
THR
231
n
193
THR
231
A
GLN
232
n
194
GLN
232
A
ASP
233
n
195
ASP
233
A
PHE
234
n
196
PHE
234
A
ALA
235
n
197
ALA
235
A
LYS
236
n
198
LYS
236
A
VAL
237
n
199
VAL
237
A
SER
238
n
200
SER
238
A
VAL
239
n
201
VAL
239
A
ALA
240
n
202
ALA
240
A
GLY
241
n
203
GLY
241
A
ASN
242
n
204
ASN
242
A
ASN
243
n
205
ASN
243
A
VAL
244
n
206
VAL
244
A
THR
245
n
207
THR
245
A
ILE
246
n
208
ILE
246
A
SER
247
n
209
SER
247
A
VAL
248
n
210
VAL
248
A
ASN
249
n
211
ASN
249
A
LYS
250
n
212
LYS
250
A
n
1
0
B
n
2
40
B
n
3
41
B
n
4
42
B
n
5
43
B
n
6
44
B
n
7
45
B
n
8
46
B
n
9
47
B
ALA
48
n
10
ALA
48
B
SER
49
n
11
SER
49
B
GLU
50
n
12
GLU
50
B
LEU
51
n
13
LEU
51
B
PRO
52
n
14
PRO
52
B
ASN
53
n
15
ASN
53
B
GLY
54
n
16
GLY
54
B
ILE
55
n
17
ILE
55
B
GLY
56
n
18
GLY
56
B
GLY
57
n
19
GLY
57
B
ARG
58
n
20
ARG
58
B
VAL
59
n
21
VAL
59
B
TYR
60
n
22
TYR
60
B
LEU
61
n
23
LEU
61
B
ASN
62
n
24
ASN
62
B
SER
63
n
25
SER
63
B
THR
64
n
26
THR
64
B
GLY
65
n
27
GLY
65
B
ALA
66
n
28
ALA
66
B
VAL
67
n
29
VAL
67
B
PHE
68
n
30
PHE
68
B
THR
69
n
31
THR
69
B
ALA
70
n
32
ALA
70
B
LYS
71
n
33
LYS
71
B
ILE
72
n
34
ILE
72
B
VAL
73
n
35
VAL
73
B
LEU
74
n
36
LEU
74
B
PRO
75
n
37
PRO
75
B
GLU
76
n
38
GLU
76
B
THR
77
n
39
THR
77
B
VAL
78
n
40
VAL
78
B
LYS
79
n
41
LYS
79
B
ASN
80
n
42
ASN
80
B
ASN
81
n
43
ASN
81
B
ASP
82
n
44
ASP
82
B
SER
83
n
45
SER
83
B
VAL
84
n
46
VAL
84
B
SER
85
n
47
SER
85
B
THR
86
n
48
THR
86
B
PRO
87
n
49
PRO
87
B
TYR
88
n
50
TYR
88
B
ILE
89
n
51
ILE
89
B
TYR
90
n
52
TYR
90
B
SER
91
n
53
SER
91
B
GLY
92
n
54
GLY
92
B
PHE
93
n
55
PHE
93
B
ARG
94
n
56
ARG
94
B
ALA
95
n
57
ALA
95
B
THR
96
n
58
THR
96
B
SER
97
n
59
SER
97
B
GLY
98
n
60
GLY
98
B
THR
99
n
61
THR
99
B
GLU
100
n
62
GLU
100
B
ALA
101
n
63
ALA
101
B
ASP
102
n
64
ASP
102
B
ILE
103
n
65
ILE
103
B
GLY
104
n
66
GLY
104
B
LEU
105
n
67
LEU
105
B
GLN
106
n
68
GLN
106
B
TYR
107
n
69
TYR
107
B
SER
108
n
70
SER
108
B
LYS
109
n
71
LYS
109
B
GLN
110
n
72
GLN
110
B
TYR
111
n
73
TYR
111
B
ASN
112
n
74
ASN
112
B
VAL
113
n
75
VAL
113
B
TRP
114
n
76
TRP
114
B
LYS
115
n
77
LYS
115
B
PRO
116
n
78
PRO
116
B
LEU
117
n
79
LEU
117
B
MSE
118
n
80
MSE
118
B
LYS
119
n
81
LYS
119
B
VAL
120
n
82
VAL
120
B
GLY
121
n
83
GLY
121
B
SER
122
n
84
SER
122
B
LYS
123
n
85
LYS
123
B
ASN
124
n
86
ASN
124
B
GLU
125
n
87
GLU
125
B
GLU
126
n
88
GLU
126
B
THR
127
n
89
THR
127
B
TYR
128
n
90
TYR
128
B
ILE
129
n
91
ILE
129
B
GLU
130
n
92
GLU
130
B
GLY
131
n
93
GLY
131
B
LYS
132
n
94
LYS
132
B
ASP
133
n
95
ASP
133
B
LYS
134
n
96
LYS
134
B
PHE
135
n
97
PHE
135
B
THR
136
n
98
THR
136
B
TYR
137
n
99
TYR
137
B
ASN
138
n
100
ASN
138
B
LYS
139
n
101
LYS
139
B
GLY
140
n
102
GLY
140
B
PHE
141
n
103
PHE
141
B
ARG
142
n
104
ARG
142
B
PRO
143
n
105
PRO
143
B
GLY
144
n
106
GLY
144
B
SER
145
n
107
SER
145
B
THR
146
n
108
THR
146
B
VAL
147
n
109
VAL
147
B
GLN
148
n
110
GLN
148
B
MSE
149
n
111
MSE
149
B
THR
150
n
112
THR
150
B
ILE
151
n
113
ILE
151
B
TYR
152
n
114
TYR
152
B
LYS
153
n
115
LYS
153
B
ASN
154
n
116
ASN
154
B
LEU
155
n
117
LEU
155
B
SER
156
n
118
SER
156
B
GLY
157
n
119
GLY
157
B
ASN
158
n
120
ASN
158
B
THR
159
n
121
THR
159
B
ARG
160
n
122
ARG
160
B
MSE
161
n
123
MSE
161
B
THR
162
n
124
THR
162
B
LEU
163
n
125
LEU
163
B
TRP
164
n
126
TRP
164
B
GLY
165
n
127
GLY
165
B
THR
166
n
128
THR
166
B
ASN
167
n
129
ASN
167
B
ASN
168
n
130
ASN
168
B
ASP
169
n
131
ASP
169
B
GLY
170
n
132
GLY
170
B
TYR
171
n
133
TYR
171
B
THR
172
n
134
THR
172
B
GLY
173
n
135
GLY
173
B
ARG
174
n
136
ARG
174
B
ILE
175
n
137
ILE
175
B
ILE
176
n
138
ILE
176
B
THR
177
n
139
THR
177
B
GLU
178
n
140
GLU
178
B
ILE
179
n
141
ILE
179
B
GLN
180
n
142
GLN
180
B
GLY
181
n
143
GLY
181
B
THR
182
n
144
THR
182
B
ASN
183
n
145
ASN
183
B
ILE
184
n
146
ILE
184
B
GLY
185
n
147
GLY
185
B
THR
186
n
148
THR
186
B
ILE
187
n
149
ILE
187
B
SER
188
n
150
SER
188
B
LYS
189
n
151
LYS
189
B
TRP
190
n
152
TRP
190
B
LYS
191
n
153
LYS
191
B
THR
192
n
154
THR
192
B
LEU
193
n
155
LEU
193
B
ALA
194
n
156
ALA
194
B
THR
195
n
157
THR
195
B
ALA
196
n
158
ALA
196
B
ALA
197
n
159
ALA
197
B
VAL
198
n
160
VAL
198
B
SER
199
n
161
SER
199
B
TYR
200
n
162
TYR
200
B
GLU
201
n
163
GLU
201
B
SER
202
n
164
SER
202
B
GLN
203
n
165
GLN
203
B
ARG
204
n
166
ARG
204
B
ASP
205
n
167
ASP
205
B
ALA
206
n
168
ALA
206
B
ILE
207
n
169
ILE
207
B
LYS
208
n
170
LYS
208
B
ALA
209
n
171
ALA
209
B
THR
210
n
172
THR
210
B
PHE
211
n
173
PHE
211
B
SER
212
n
174
SER
212
B
THR
213
n
175
THR
213
B
SER
214
n
176
SER
214
B
PHE
215
n
177
PHE
215
B
ASN
216
n
178
ASN
216
B
ASN
217
n
179
ASN
217
B
ILE
218
n
180
ILE
218
B
THR
219
n
181
THR
219
B
ILE
220
n
182
ILE
220
B
ASP
221
n
183
ASP
221
B
ASN
222
n
184
ASN
222
B
LYS
223
n
185
LYS
223
B
ALA
224
n
186
ALA
224
B
VAL
225
n
187
VAL
225
B
THR
226
n
188
THR
226
B
PRO
227
n
189
PRO
227
B
VAL
228
n
190
VAL
228
B
VAL
229
n
191
VAL
229
B
ASP
230
n
192
ASP
230
B
THR
231
n
193
THR
231
B
GLN
232
n
194
GLN
232
B
ASP
233
n
195
ASP
233
B
PHE
234
n
196
PHE
234
B
ALA
235
n
197
ALA
235
B
LYS
236
n
198
LYS
236
B
VAL
237
n
199
VAL
237
B
SER
238
n
200
SER
238
B
VAL
239
n
201
VAL
239
B
ALA
240
n
202
ALA
240
B
GLY
241
n
203
GLY
241
B
ASN
242
n
204
ASN
242
B
ASN
243
n
205
ASN
243
B
VAL
244
n
206
VAL
244
B
THR
245
n
207
THR
245
B
ILE
246
n
208
ILE
246
B
SER
247
n
209
SER
247
B
VAL
248
n
210
VAL
248
B
ASN
249
n
211
ASN
249
B
LYS
250
n
212
LYS
250
B
0.8531
0.1457
0.2774
1.1031
0.8309
2.0936
-0.0317
0.0189
0.0340
0.1025
0.1569
-0.0979
0.2220
0.3154
-0.1252
-0.0537
0.0365
-0.0166
-0.0360
-0.0230
-0.0581
refined
5.1716
52.8499
16.7460
X-RAY DIFFRACTION
1.0202
0.1392
0.5034
1.0092
0.5673
2.6352
-0.1666
0.1275
0.0060
-0.0451
0.0853
-0.0199
-0.2844
0.2852
0.0813
-0.0523
-0.0480
-0.0378
-0.0581
0.0102
-0.0689
refined
10.8945
36.0053
41.8830
X-RAY DIFFRACTION
A
48
A
250
X-RAY DIFFRACTION
1
{A|48 - 250}
B
48
B
250
X-RAY DIFFRACTION
2
{B|48 - 250}
author_and_software_defined_assembly
PISA
2
dimeric
2380
-64
16840
A
MSE
118
SELENOMETHIONINE
A
MSE
80
MET
A
MSE
149
SELENOMETHIONINE
A
MSE
111
MET
A
MSE
161
SELENOMETHIONINE
A
MSE
123
MET
B
MSE
118
SELENOMETHIONINE
B
MSE
80
MET
B
MSE
149
SELENOMETHIONINE
B
MSE
111
MET
B
MSE
161
SELENOMETHIONINE
B
MSE
123
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
117
A
O
LEU
79
A
N
GLY
104
A
N
GLY
66
A
O
LEU
105
A
O
LEU
67
A
N
ILE
89
A
N
ILE
51
A
N
TYR
88
A
N
TYR
50
A
O
THR
195
A
O
THR
157
A
O
TRP
190
A
O
TRP
152
A
N
LEU
61
A
N
LEU
23
A
N
GLY
56
A
N
GLY
18
A
O
ASP
233
A
O
ASP
195
A
N
THR
127
A
N
THR
89
A
O
GLU
178
A
O
GLU
140
A
O
THR
177
A
O
THR
139
A
N
MSE
161
A
N
MSE
123
A
O
ASN
158
A
O
ASN
120
A
N
LEU
155
A
N
LEU
117
A
O
VAL
147
A
O
VAL
109
A
N
ILE
72
A
N
ILE
34
A
N
LYS
71
A
N
LYS
33
A
O
ASN
216
A
O
ASN
178
A
N
ILE
220
A
N
ILE
182
A
O
LYS
223
A
O
LYS
185
A
N
THR
127
A
N
THR
89
A
O
GLU
178
A
O
GLU
140
A
O
THR
177
A
O
THR
139
A
N
MSE
161
A
N
MSE
123
A
O
ASN
158
A
O
ASN
120
A
N
LEU
155
A
N
LEU
117
A
O
VAL
147
A
O
VAL
109
A
N
ILE
72
A
N
ILE
34
A
N
LYS
71
A
N
LYS
33
A
O
ASN
216
A
O
ASN
178
A
N
PHE
215
A
N
PHE
177
A
O
VAL
244
A
O
VAL
206
A
O
THR
245
A
O
THR
207
A
N
SER
238
A
N
SER
200
B
O
VAL
113
B
O
VAL
75
B
N
SER
108
B
N
SER
70
B
O
LEU
105
B
O
LEU
67
B
N
ILE
89
B
N
ILE
51
B
N
ARG
94
B
N
ARG
56
B
O
SER
188
B
O
SER
150
B
O
TRP
190
B
O
TRP
152
B
N
LEU
61
B
N
LEU
23
B
N
GLY
56
B
N
GLY
18
B
O
ASP
233
B
O
ASP
195
B
N
THR
127
B
N
THR
89
B
O
GLU
178
B
O
GLU
140
B
O
THR
177
B
O
THR
139
B
N
MSE
161
B
N
MSE
123
B
O
ASN
158
B
O
ASN
120
B
N
LEU
155
B
N
LEU
117
B
O
VAL
147
B
O
VAL
109
B
N
ILE
72
B
N
ILE
34
B
N
LYS
71
B
N
LYS
33
B
O
ASN
216
B
O
ASN
178
B
N
ILE
220
B
N
ILE
182
B
O
LYS
223
B
O
LYS
185
B
N
THR
127
B
N
THR
89
B
O
GLU
178
B
O
GLU
140
B
O
THR
177
B
O
THR
139
B
N
MSE
161
B
N
MSE
123
B
O
ASN
158
B
O
ASN
120
B
N
LEU
155
B
N
LEU
117
B
O
VAL
147
B
O
VAL
109
B
N
ILE
72
B
N
ILE
34
B
N
LYS
71
B
N
LYS
33
B
O
ASN
216
B
O
ASN
178
B
N
PHE
215
B
N
PHE
177
B
O
VAL
244
B
O
VAL
206
B
O
THR
245
B
O
THR
207
B
N
SER
238
B
N
SER
200
1
A
HOH
433
G
HOH
1
B
HOH
407
H
HOH
1
A
GLY
0
A
GLY
1
1
Y
1
A
ALA
40
A
ALA
2
1
Y
1
A
ASP
41
A
ASP
3
1
Y
1
A
ALA
42
A
ALA
4
1
Y
1
A
GLN
43
A
GLN
5
1
Y
1
A
VAL
44
A
VAL
6
1
Y
1
A
ALA
45
A
ALA
7
1
Y
1
A
LYS
46
A
LYS
8
1
Y
1
A
ALA
47
A
ALA
9
1
Y
1
B
GLY
0
B
GLY
1
1
Y
1
B
ALA
40
B
ALA
2
1
Y
1
B
ASP
41
B
ASP
3
1
Y
1
B
ALA
42
B
ALA
4
1
Y
1
B
GLN
43
B
GLN
5
1
Y
1
B
VAL
44
B
VAL
6
1
Y
1
B
ALA
45
B
ALA
7
1
Y
1
B
LYS
46
B
LYS
8
1
Y
1
B
ALA
47
B
ALA
9
1
Y
1
A
ASN
80
-149.85
53.09
1
A
VAL
84
-134.22
-32.34
1
A
SER
91
-112.96
-161.94
1
A
SER
91
-113.22
-161.64
1
A
TYR
137
60.40
-106.91
1
A
ASP
230
-117.12
-127.27
1
B
ASN
80
-151.27
53.17
1
B
SER
91
-112.53
-162.15
1
B
SER
91
-112.82
-161.85
1
B
TYR
137
60.37
-108.90
1
B
ASP
230
-116.48
-127.73
92.080
25.9069
9.060
-1.5509
0.0000
0.9702
-1.4996
0.0000
3.0505
0.9487
0.9383
1. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR RESTRAINT REPRESENTATION (-AUTONCS). 4. SO4 MOLECULES MODELED ARE PRESENT IN CRYSTALLIZATION CONDITIONS.
0.2164
0.1916
0.1929
1.5500
38.52
3192
62814
5.0800
99.9000
1.000
0.300
RANDOM
1
THROUGHOUT
0.000
SAD
0.247
1.5500
38.52
501
3641
20
0
3120
1627
SINUSOIDAL
2.000
87
HARMONIC
2.000
521
HARMONIC
5.000
3420
HARMONIC
20.000
483
SEMIHARMONIC
5.000
4396
SEMIHARMONIC
4.000
0.010
3420
HARMONIC
2.000
1.200
4685
HARMONIC
2.000
4.410
2.500
0.2464
0.2222
0.2234
1.5900
240
4394
4634
20
5.1800
99.9000
17.88
1.550
38.5
4HFS
62880
62880
0.082
1
8.000
3.300
99.900
0.553
1.550
1.630
2.2
30171
9124
0.553
1
3.300
100.000
0.367
1.630
1.730
3.1
28521
8625
0.367
1
3.300
100.000
0.222
1.730
1.850
4.6
26826
8095
0.222
1
3.300
100.000
0.136
1.850
2.000
6.9
25142
7597
0.136
1
3.300
100.000
0.094
2.000
2.190
9.3
23035
6970
0.094
1
3.300
100.000
0.081
2.190
2.450
10.8
20941
6335
0.081
1
3.300
99.900
0.078
2.450
2.830
12.1
18257
5596
0.078
1
3.300
99.800
0.067
2.830
3.470
14.5
14974
4727
0.067
1
3.200
99.900
0.056
3.470
4.900
16.4
11703
3723
0.056
1
3.100
99.900
0.060
4.900
38.519
16.3
7006
2088
0.060
1
3.400
99.300
model building
D.C. & J.S. Richardson lab
molprobity@kinemage.biochem.duke.edu
http://kinemage.biochem.duke.edu/molprobity/
MolProbity
package
3beta29
data extraction
PDB
deposit@deposit.rcsb.org
June 10, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.10
phasing
George M. Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
phasing
Eric de La Fortelle
sharp-develop@globalphasing.com
http://www.globalphasing.com/sharp/
SHARP
package
data scaling
Phil Evans
pre@mrc-lmb.cam.ac.uk
SCALA
package
3.3.20
refinement
Gerard Bricogne
buster-develop@GlobalPhasing.com
http://www.globalphasing.com/buster/
BUSTER-TNT
program
2.10.0
data reduction
MOSFLM
phasing
SHELXD
refinement
BUSTER
2.10.0
Y
Crystal structure of an uncharacterized protein (yncM) from Bacillus subtilis subsp. subtilis str. 168 at 1.55 A resolution
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
GLY
131
A
GLY
93
HELX_P
A
THR
136
A
THR
98
1
1
6
A
TYR
200
A
TYR
162
HELX_P
A
ILE
207
A
ILE
169
5
2
8
B
GLY
131
B
GLY
93
HELX_P
B
THR
136
B
THR
98
1
3
6
B
TYR
200
B
TYR
162
HELX_P
B
ASP
205
B
ASP
167
5
4
6
covale
1.313
both
A
LEU
117
A
C
LEU
79
1_555
A
MSE
118
A
N
MSE
80
1_555
covale
1.328
both
A
MSE
118
A
C
MSE
80
1_555
A
LYS
119
A
N
LYS
81
1_555
covale
1.338
both
A
GLN
148
A
C
GLN
110
1_555
A
MSE
149
A
N
MSE
111
1_555
covale
1.331
both
A
MSE
149
A
C
MSE
111
1_555
A
THR
150
A
N
THR
112
1_555
covale
1.333
both
A
ARG
160
A
C
ARG
122
1_555
A
MSE
161
A
N
MSE
123
1_555
covale
1.337
both
A
MSE
161
A
C
MSE
123
1_555
A
THR
162
A
N
THR
124
1_555
covale
1.352
both
A
B
LEU
117
B
C
LEU
79
1_555
B
MSE
118
B
N
MSE
80
1_555
covale
1.316
both
B
B
LEU
117
B
C
LEU
79
1_555
B
MSE
118
B
N
MSE
80
1_555
covale
1.316
both
B
MSE
118
B
C
MSE
80
1_555
B
LYS
119
B
N
LYS
81
1_555
covale
1.341
both
B
GLN
148
B
C
GLN
110
1_555
B
MSE
149
B
N
MSE
111
1_555
covale
1.326
both
B
MSE
149
B
C
MSE
111
1_555
B
THR
150
B
N
THR
112
1_555
covale
1.327
both
B
ARG
160
B
C
ARG
122
1_555
B
MSE
161
B
N
MSE
123
1_555
covale
1.349
both
B
MSE
161
B
C
MSE
123
1_555
B
THR
162
B
N
THR
124
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
peptidase A4-like fold, YrpD, PF15493 family, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION
YNCM_BACSU
UNP
1
40
O31803
ADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMK
VGSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTRMTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVS
YESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAGNNVTISVNK
40
250
4HFS
40
250
O31803
A
1
2
212
40
250
4HFS
40
250
O31803
B
1
2
212
1
expression tag
GLY
0
4HFS
A
O31803
UNP
1
2
expression tag
GLY
0
4HFS
B
O31803
UNP
1
6
7
8
6
7
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
113
A
VAL
75
A
VAL
120
A
VAL
82
A
GLU
100
A
GLU
62
A
SER
108
A
SER
70
A
THR
86
A
THR
48
A
ALA
95
A
ALA
57
A
ILE
187
A
ILE
149
A
ALA
197
A
ALA
159
A
GLY
54
A
GLY
16
A
LEU
61
A
LEU
23
A
VAL
228
A
VAL
190
A
ASP
233
A
ASP
195
A
THR
127
A
THR
89
A
GLU
130
A
GLU
92
A
THR
172
A
THR
134
A
ILE
179
A
ILE
141
A
ASN
158
A
ASN
120
A
THR
166
A
THR
128
A
THR
146
A
THR
108
A
LEU
155
A
LEU
117
A
VAL
67
A
VAL
29
A
VAL
73
A
VAL
35
A
ALA
209
A
ALA
171
A
ILE
220
A
ILE
182
A
LYS
223
A
LYS
185
A
ALA
224
A
ALA
186
A
THR
127
A
THR
89
A
GLU
130
A
GLU
92
A
THR
172
A
THR
134
A
ILE
179
A
ILE
141
A
ASN
158
A
ASN
120
A
THR
166
A
THR
128
A
THR
146
A
THR
108
A
LEU
155
A
LEU
117
A
VAL
67
A
VAL
29
A
VAL
73
A
VAL
35
A
ALA
209
A
ALA
171
A
ILE
220
A
ILE
182
A
VAL
244
A
VAL
206
A
LYS
250
A
LYS
212
A
ALA
235
A
ALA
197
A
VAL
239
A
VAL
201
B
VAL
113
B
VAL
75
B
VAL
120
B
VAL
82
B
GLU
100
B
GLU
62
B
SER
108
B
SER
70
B
THR
86
B
THR
48
B
ALA
95
B
ALA
57
B
ILE
187
B
ILE
149
B
ALA
197
B
ALA
159
B
GLY
54
B
GLY
16
B
LEU
61
B
LEU
23
B
VAL
228
B
VAL
190
B
ASP
233
B
ASP
195
B
THR
127
B
THR
89
B
GLU
130
B
GLU
92
B
THR
172
B
THR
134
B
ILE
179
B
ILE
141
B
ASN
158
B
ASN
120
B
THR
166
B
THR
128
B
THR
146
B
THR
108
B
LEU
155
B
LEU
117
B
VAL
67
B
VAL
29
B
VAL
73
B
VAL
35
B
ALA
209
B
ALA
171
B
ILE
220
B
ILE
182
B
LYS
223
B
LYS
185
B
ALA
224
B
ALA
186
B
THR
127
B
THR
89
B
GLU
130
B
GLU
92
B
THR
172
B
THR
134
B
ILE
179
B
ILE
141
B
ASN
158
B
ASN
120
B
THR
166
B
THR
128
B
THR
146
B
THR
108
B
LEU
155
B
LEU
117
B
VAL
67
B
VAL
29
B
VAL
73
B
VAL
35
B
ALA
209
B
ALA
171
B
ILE
220
B
ILE
182
B
VAL
244
B
VAL
206
B
LYS
250
B
LYS
212
B
ALA
235
B
ALA
197
B
VAL
239
B
VAL
201
BINDING SITE FOR RESIDUE SO4 A 301
A
SO4
301
Software
6
BINDING SITE FOR RESIDUE SO4 A 302
A
SO4
302
Software
9
BINDING SITE FOR RESIDUE SO4 B 301
B
SO4
301
Software
7
BINDING SITE FOR RESIDUE SO4 B 302
B
SO4
302
Software
8
A
ARG
58
A
ARG
20
6
1_555
A
TYR
60
A
TYR
22
6
1_555
A
GLU
100
A
GLU
62
6
1_555
A
LYS
191
A
LYS
153
6
1_555
A
HOH
628
G
HOH
6
1_555
A
HOH
643
G
HOH
6
1_555
A
LYS
115
A
LYS
77
9
1_555
A
TYR
128
A
TYR
90
9
1_555
A
THR
136
A
THR
98
9
1_555
A
TYR
137
A
TYR
99
9
1_555
A
HOH
626
G
HOH
9
1_555
A
HOH
639
G
HOH
9
1_555
B
LYS
132
B
LYS
94
9
1_565
B
ASP
133
B
ASP
95
9
1_565
B
SER
202
B
SER
164
9
1_555
B
ARG
58
B
ARG
20
7
1_555
B
TYR
60
B
TYR
22
7
1_555
B
GLU
100
B
GLU
62
7
1_555
B
LYS
191
B
LYS
153
7
1_555
B
HOH
479
H
HOH
7
1_555
B
HOH
589
H
HOH
7
1_555
B
HOH
610
H
HOH
7
1_555
A
LYS
132
A
LYS
94
8
1_545
A
ASP
133
A
ASP
95
8
1_545
A
HOH
528
G
HOH
8
1_545
B
LYS
115
B
LYS
77
8
1_555
B
THR
136
B
THR
98
8
1_555
B
TYR
137
B
TYR
99
8
1_555
B
HOH
604
H
HOH
8
1_555
B
HOH
605
H
HOH
8
1_555
3
P 1 2 1