0.008745
0.005049
0.000000
0.000000
0.010098
0.000000
0.000000
0.000000
0.005859
0.00000
0.00000
0.00000
Dessau, M.
Modis, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
114.347
114.347
170.675
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
110
1696
1701
10.1073/pnas.1217780110
23319635
Crystal structure of glycoprotein C from Rift Valley fever virus.
2013
100
1
PIXEL
2012-07-18
PSI PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X25
NSLS
1.1
SYNCHROTRON
NSLS BEAMLINE X25
46586.316
ENVELOPE GLYCOPROTEIN
1
man
polymer
18.015
water
5
nat
water
GP, M polyprotein, Non-structural protein NSm, Glycoprotein G1, Glycoprotein G2
no
no
CSELIQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCREGQSYWTGSFSPK
CLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMRENKCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVF
NCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPGKGYAIVDEPFSEIPRQGFLG
EIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQAFSKGSVQAD
LTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTV
PEVEEEFMYSCDGDERPLLVKGTLIAID
CSELIQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCREGQSYWTGSFSPK
CLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMRENKCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVF
NCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPGKGYAIVDEPFSEIPRQGFLG
EIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQAFSKGSVQAD
LTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTV
PEVEEEFMYSCDGDERPLLVKGTLIAID
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
RVFV
sample
11588
Rift Valley fever virus
10469
unidentified baculovirus
plasmid
pAc-gp67
1
3.46
64.42
VAPOR DIFFUSION, HANGING DROP
6.2
12% PEG 5000 MME, 0.1 M MES, O.1 M Ammonium sulfate, 5% glycerol, 1.8 mM UDM, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 289K
289
software
repository
Initial release
Database references
Database references
Refinement description
1
0
2013-01-16
1
1
2013-01-30
1
2
2013-02-13
1
3
2017-11-15
_software.name
RCSB
Y
RCSB
2012-10-12
REL
REL
HOH
water
HOH
1201
2
HOH
HOH
1201
A
HOH
1202
2
HOH
HOH
1202
A
HOH
1203
2
HOH
HOH
1203
A
HOH
1204
2
HOH
HOH
1204
A
HOH
1205
2
HOH
HOH
1205
A
CYS
691
n
1
CYS
691
A
SER
692
n
2
SER
692
A
GLU
693
n
3
GLU
693
A
LEU
694
n
4
LEU
694
A
ILE
695
n
5
ILE
695
A
GLN
696
n
6
GLN
696
A
ALA
697
n
7
ALA
697
A
SER
698
n
8
SER
698
A
SER
699
n
9
SER
699
A
ARG
700
n
10
ARG
700
A
ILE
701
n
11
ILE
701
A
THR
702
n
12
THR
702
A
THR
703
n
13
THR
703
A
CYS
704
n
14
CYS
704
A
SER
705
n
15
SER
705
A
THR
706
n
16
THR
706
A
GLU
707
n
17
GLU
707
A
GLY
708
n
18
GLY
708
A
VAL
709
n
19
VAL
709
A
ASN
710
n
20
ASN
710
A
THR
711
n
21
THR
711
A
LYS
712
n
22
LYS
712
A
CYS
713
n
23
CYS
713
A
ARG
714
n
24
ARG
714
A
LEU
715
n
25
LEU
715
A
SER
716
n
26
SER
716
A
GLY
717
n
27
GLY
717
A
THR
718
n
28
THR
718
A
ALA
719
n
29
ALA
719
A
LEU
720
n
30
LEU
720
A
ILE
721
n
31
ILE
721
A
ARG
722
n
32
ARG
722
A
ALA
723
n
33
ALA
723
A
GLY
724
n
34
GLY
724
A
SER
725
n
35
SER
725
A
VAL
726
n
36
VAL
726
A
GLY
727
n
37
GLY
727
A
ALA
728
n
38
ALA
728
A
GLU
729
n
39
GLU
729
A
ALA
730
n
40
ALA
730
A
CYS
731
n
41
CYS
731
A
LEU
732
n
42
LEU
732
A
MET
733
n
43
MET
733
A
LEU
734
n
44
LEU
734
A
LYS
735
n
45
LYS
735
A
GLY
736
n
46
GLY
736
A
VAL
737
n
47
VAL
737
A
LYS
738
n
48
LYS
738
A
GLU
739
n
49
GLU
739
A
ASP
740
n
50
ASP
740
A
GLN
741
n
51
GLN
741
A
THR
742
n
52
THR
742
A
LYS
743
n
53
LYS
743
A
PHE
744
n
54
PHE
744
A
LEU
745
n
55
LEU
745
A
LYS
746
n
56
LYS
746
A
ILE
747
n
57
ILE
747
A
LYS
748
n
58
LYS
748
A
THR
749
n
59
THR
749
A
VAL
750
n
60
VAL
750
A
SER
751
n
61
SER
751
A
SER
752
n
62
SER
752
A
GLU
753
n
63
GLU
753
A
LEU
754
n
64
LEU
754
A
SER
755
n
65
SER
755
A
CYS
756
n
66
CYS
756
A
ARG
757
n
67
ARG
757
A
GLU
758
n
68
GLU
758
A
GLY
759
n
69
GLY
759
A
GLN
760
n
70
GLN
760
A
SER
761
n
71
SER
761
A
TYR
762
n
72
TYR
762
A
TRP
763
n
73
TRP
763
A
THR
764
n
74
THR
764
A
GLY
765
n
75
GLY
765
A
SER
766
n
76
SER
766
A
PHE
767
n
77
PHE
767
A
SER
768
n
78
SER
768
A
PRO
769
n
79
PRO
769
A
LYS
770
n
80
LYS
770
A
CYS
771
n
81
CYS
771
A
LEU
772
n
82
LEU
772
A
SER
773
n
83
SER
773
A
SER
774
n
84
SER
774
A
ARG
775
n
85
ARG
775
A
ARG
776
n
86
ARG
776
A
CYS
777
n
87
CYS
777
A
HIS
778
n
88
HIS
778
A
LEU
779
n
89
LEU
779
A
VAL
780
n
90
VAL
780
A
GLY
781
n
91
GLY
781
A
GLU
782
n
92
GLU
782
A
CYS
783
n
93
CYS
783
A
HIS
784
n
94
HIS
784
A
VAL
785
n
95
VAL
785
A
ASN
786
n
96
ASN
786
A
ARG
787
n
97
ARG
787
A
CYS
788
n
98
CYS
788
A
LEU
789
n
99
LEU
789
A
SER
790
n
100
SER
790
A
TRP
791
n
101
TRP
791
A
ARG
792
n
102
ARG
792
A
ASP
793
n
103
ASP
793
A
ASN
794
n
104
ASN
794
A
GLU
795
n
105
GLU
795
A
THR
796
n
106
THR
796
A
SER
797
n
107
SER
797
A
ALA
798
n
108
ALA
798
A
GLU
799
n
109
GLU
799
A
PHE
800
n
110
PHE
800
A
SER
801
n
111
SER
801
A
PHE
802
n
112
PHE
802
A
VAL
803
n
113
VAL
803
A
GLY
804
n
114
GLY
804
A
GLU
805
n
115
GLU
805
A
SER
806
n
116
SER
806
A
THR
807
n
117
THR
807
A
THR
808
n
118
THR
808
A
MET
809
n
119
MET
809
A
ARG
810
n
120
ARG
810
A
GLU
811
n
121
GLU
811
A
ASN
812
n
122
ASN
812
A
LYS
813
n
123
LYS
813
A
CYS
814
n
124
CYS
814
A
PHE
815
n
125
PHE
815
A
GLU
816
n
126
GLU
816
A
GLN
817
n
127
GLN
817
A
CYS
818
n
128
CYS
818
A
GLY
819
n
129
GLY
819
A
GLY
820
n
130
GLY
820
A
TRP
821
n
131
TRP
821
A
GLY
822
n
132
GLY
822
A
CYS
823
n
133
CYS
823
A
GLY
824
n
134
GLY
824
A
CYS
825
n
135
CYS
825
A
PHE
826
n
136
PHE
826
A
ASN
827
n
137
ASN
827
A
VAL
828
n
138
VAL
828
A
ASN
829
n
139
ASN
829
A
PRO
830
n
140
PRO
830
A
SER
831
n
141
SER
831
A
CYS
832
n
142
CYS
832
A
LEU
833
n
143
LEU
833
A
PHE
834
n
144
PHE
834
A
VAL
835
n
145
VAL
835
A
HIS
836
n
146
HIS
836
A
THR
837
n
147
THR
837
A
TYR
838
n
148
TYR
838
A
LEU
839
n
149
LEU
839
A
GLN
840
n
150
GLN
840
A
SER
841
n
151
SER
841
A
VAL
842
n
152
VAL
842
A
ARG
843
n
153
ARG
843
A
LYS
844
n
154
LYS
844
A
GLU
845
n
155
GLU
845
A
ALA
846
n
156
ALA
846
A
LEU
847
n
157
LEU
847
A
ARG
848
n
158
ARG
848
A
VAL
849
n
159
VAL
849
A
PHE
850
n
160
PHE
850
A
ASN
851
n
161
ASN
851
A
CYS
852
n
162
CYS
852
A
ILE
853
n
163
ILE
853
A
ASP
854
n
164
ASP
854
A
TRP
855
n
165
TRP
855
A
VAL
856
n
166
VAL
856
A
HIS
857
n
167
HIS
857
A
LYS
858
n
168
LYS
858
A
LEU
859
n
169
LEU
859
A
THR
860
n
170
THR
860
A
LEU
861
n
171
LEU
861
A
GLU
862
n
172
GLU
862
A
ILE
863
n
173
ILE
863
A
THR
864
n
174
THR
864
A
ASP
865
n
175
ASP
865
A
PHE
866
n
176
PHE
866
A
ASP
867
n
177
ASP
867
A
GLY
868
n
178
GLY
868
A
SER
869
n
179
SER
869
A
VAL
870
n
180
VAL
870
A
SER
871
n
181
SER
871
A
THR
872
n
182
THR
872
A
ILE
873
n
183
ILE
873
A
ASP
874
n
184
ASP
874
A
LEU
875
n
185
LEU
875
A
GLY
876
n
186
GLY
876
A
ALA
877
n
187
ALA
877
A
SER
878
n
188
SER
878
A
SER
879
n
189
SER
879
A
SER
880
n
190
SER
880
A
ARG
881
n
191
ARG
881
A
PHE
882
n
192
PHE
882
A
THR
883
n
193
THR
883
A
ASN
884
n
194
ASN
884
A
TRP
885
n
195
TRP
885
A
GLY
886
n
196
GLY
886
A
SER
887
n
197
SER
887
A
VAL
888
n
198
VAL
888
A
SER
889
n
199
SER
889
A
LEU
890
n
200
LEU
890
A
SER
891
n
201
SER
891
A
LEU
892
n
202
LEU
892
A
ASP
893
n
203
ASP
893
A
ALA
894
n
204
ALA
894
A
GLU
895
n
205
GLU
895
A
GLY
896
n
206
GLY
896
A
ILE
897
n
207
ILE
897
A
SER
898
n
208
SER
898
A
GLY
899
n
209
GLY
899
A
SER
900
n
210
SER
900
A
ASN
901
n
211
ASN
901
A
SER
902
n
212
SER
902
A
PHE
903
n
213
PHE
903
A
SER
904
n
214
SER
904
A
PHE
905
n
215
PHE
905
A
ILE
906
n
216
ILE
906
A
GLU
907
n
217
GLU
907
A
SER
908
n
218
SER
908
A
PRO
909
n
219
PRO
909
A
GLY
910
n
220
GLY
910
A
LYS
911
n
221
LYS
911
A
GLY
912
n
222
GLY
912
A
TYR
913
n
223
TYR
913
A
ALA
914
n
224
ALA
914
A
ILE
915
n
225
ILE
915
A
VAL
916
n
226
VAL
916
A
ASP
917
n
227
ASP
917
A
GLU
918
n
228
GLU
918
A
PRO
919
n
229
PRO
919
A
PHE
920
n
230
PHE
920
A
SER
921
n
231
SER
921
A
GLU
922
n
232
GLU
922
A
ILE
923
n
233
ILE
923
A
PRO
924
n
234
PRO
924
A
ARG
925
n
235
ARG
925
A
GLN
926
n
236
GLN
926
A
GLY
927
n
237
GLY
927
A
PHE
928
n
238
PHE
928
A
LEU
929
n
239
LEU
929
A
GLY
930
n
240
GLY
930
A
GLU
931
n
241
GLU
931
A
ILE
932
n
242
ILE
932
A
ARG
933
n
243
ARG
933
A
CYS
934
n
244
CYS
934
A
ASN
935
n
245
ASN
935
A
SER
936
n
246
SER
936
A
GLU
937
n
247
GLU
937
A
SER
938
n
248
SER
938
A
SER
939
n
249
SER
939
A
VAL
940
n
250
VAL
940
A
LEU
941
n
251
LEU
941
A
SER
942
n
252
SER
942
A
ALA
943
n
253
ALA
943
A
HIS
944
n
254
HIS
944
A
GLU
945
n
255
GLU
945
A
SER
946
n
256
SER
946
A
CYS
947
n
257
CYS
947
A
LEU
948
n
258
LEU
948
A
ARG
949
n
259
ARG
949
A
ALA
950
n
260
ALA
950
A
PRO
951
n
261
PRO
951
A
ASN
952
n
262
ASN
952
A
LEU
953
n
263
LEU
953
A
ILE
954
n
264
ILE
954
A
SER
955
n
265
SER
955
A
TYR
956
n
266
TYR
956
A
LYS
957
n
267
LYS
957
A
PRO
958
n
268
PRO
958
A
MET
959
n
269
MET
959
A
ILE
960
n
270
ILE
960
A
ASP
961
n
271
ASP
961
A
GLN
962
n
272
GLN
962
A
LEU
963
n
273
LEU
963
A
GLU
964
n
274
GLU
964
A
CYS
965
n
275
CYS
965
A
THR
966
n
276
THR
966
A
THR
967
n
277
THR
967
A
ASN
968
n
278
ASN
968
A
LEU
969
n
279
LEU
969
A
ILE
970
n
280
ILE
970
A
ASP
971
n
281
ASP
971
A
PRO
972
n
282
PRO
972
A
PHE
973
n
283
PHE
973
A
VAL
974
n
284
VAL
974
A
VAL
975
n
285
VAL
975
A
PHE
976
n
286
PHE
976
A
GLU
977
n
287
GLU
977
A
ARG
978
n
288
ARG
978
A
GLY
979
n
289
GLY
979
A
SER
980
n
290
SER
980
A
LEU
981
n
291
LEU
981
A
PRO
982
n
292
PRO
982
A
GLN
983
n
293
GLN
983
A
THR
984
n
294
THR
984
A
ARG
985
n
295
ARG
985
A
ASN
986
n
296
ASN
986
A
ASP
987
n
297
ASP
987
A
LYS
988
n
298
LYS
988
A
THR
989
n
299
THR
989
A
PHE
990
n
300
PHE
990
A
ALA
991
n
301
ALA
991
A
ALA
992
n
302
ALA
992
A
SER
993
n
303
SER
993
A
LYS
994
n
304
LYS
994
A
GLY
995
n
305
GLY
995
A
ASN
996
n
306
ASN
996
A
ARG
997
n
307
ARG
997
A
GLY
998
n
308
GLY
998
A
VAL
999
n
309
VAL
999
A
GLN
1000
n
310
GLN
1000
A
ALA
1001
n
311
ALA
1001
A
PHE
1002
n
312
PHE
1002
A
SER
1003
n
313
SER
1003
A
LYS
1004
n
314
LYS
1004
A
GLY
1005
n
315
GLY
1005
A
SER
1006
n
316
SER
1006
A
VAL
1007
n
317
VAL
1007
A
GLN
1008
n
318
GLN
1008
A
ALA
1009
n
319
ALA
1009
A
ASP
1010
n
320
ASP
1010
A
LEU
1011
n
321
LEU
1011
A
THR
1012
n
322
THR
1012
A
LEU
1013
n
323
LEU
1013
A
MET
1014
n
324
MET
1014
A
PHE
1015
n
325
PHE
1015
A
ASP
1016
n
326
ASP
1016
A
ASN
1017
n
327
ASN
1017
A
PHE
1018
n
328
PHE
1018
A
GLU
1019
n
329
GLU
1019
A
VAL
1020
n
330
VAL
1020
A
ASP
1021
n
331
ASP
1021
A
PHE
1022
n
332
PHE
1022
A
VAL
1023
n
333
VAL
1023
A
GLY
1024
n
334
GLY
1024
A
ALA
1025
n
335
ALA
1025
A
ALA
1026
n
336
ALA
1026
A
VAL
1027
n
337
VAL
1027
A
SER
1028
n
338
SER
1028
A
CYS
1029
n
339
CYS
1029
A
ASP
1030
n
340
ASP
1030
A
ALA
1031
n
341
ALA
1031
A
ALA
1032
n
342
ALA
1032
A
PHE
1033
n
343
PHE
1033
A
LEU
1034
n
344
LEU
1034
A
ASN
1035
n
345
ASN
1035
A
LEU
1036
n
346
LEU
1036
A
THR
1037
n
347
THR
1037
A
GLY
1038
n
348
GLY
1038
A
CYS
1039
n
349
CYS
1039
A
TYR
1040
n
350
TYR
1040
A
SER
1041
n
351
SER
1041
A
CYS
1042
n
352
CYS
1042
A
ASN
1043
n
353
ASN
1043
A
ALA
1044
n
354
ALA
1044
A
GLY
1045
n
355
GLY
1045
A
ALA
1046
n
356
ALA
1046
A
ARG
1047
n
357
ARG
1047
A
VAL
1048
n
358
VAL
1048
A
CYS
1049
n
359
CYS
1049
A
LEU
1050
n
360
LEU
1050
A
SER
1051
n
361
SER
1051
A
ILE
1052
n
362
ILE
1052
A
THR
1053
n
363
THR
1053
A
SER
1054
n
364
SER
1054
A
THR
1055
n
365
THR
1055
A
GLY
1056
n
366
GLY
1056
A
THR
1057
n
367
THR
1057
A
GLY
1058
n
368
GLY
1058
A
SER
1059
n
369
SER
1059
A
LEU
1060
n
370
LEU
1060
A
SER
1061
n
371
SER
1061
A
ALA
1062
n
372
ALA
1062
A
HIS
1063
n
373
HIS
1063
A
ASN
1064
n
374
ASN
1064
A
LYS
1065
n
375
LYS
1065
A
ASP
1066
n
376
ASP
1066
A
GLY
1067
n
377
GLY
1067
A
SER
1068
n
378
SER
1068
A
LEU
1069
n
379
LEU
1069
A
HIS
1070
n
380
HIS
1070
A
ILE
1071
n
381
ILE
1071
A
VAL
1072
n
382
VAL
1072
A
LEU
1073
n
383
LEU
1073
A
PRO
1074
n
384
PRO
1074
A
SER
1075
n
385
SER
1075
A
GLU
1076
n
386
GLU
1076
A
ASN
1077
n
387
ASN
1077
A
GLY
1078
n
388
GLY
1078
A
THR
1079
n
389
THR
1079
A
LYS
1080
n
390
LYS
1080
A
ASP
1081
n
391
ASP
1081
A
GLN
1082
n
392
GLN
1082
A
CYS
1083
n
393
CYS
1083
A
GLN
1084
n
394
GLN
1084
A
ILE
1085
n
395
ILE
1085
A
LEU
1086
n
396
LEU
1086
A
HIS
1087
n
397
HIS
1087
A
PHE
1088
n
398
PHE
1088
A
THR
1089
n
399
THR
1089
A
VAL
1090
n
400
VAL
1090
A
PRO
1091
n
401
PRO
1091
A
GLU
1092
n
402
GLU
1092
A
VAL
1093
n
403
VAL
1093
A
GLU
1094
n
404
GLU
1094
A
GLU
1095
n
405
GLU
1095
A
GLU
1096
n
406
GLU
1096
A
PHE
1097
n
407
PHE
1097
A
MET
1098
n
408
MET
1098
A
TYR
1099
n
409
TYR
1099
A
SER
1100
n
410
SER
1100
A
CYS
1101
n
411
CYS
1101
A
ASP
1102
n
412
ASP
1102
A
GLY
1103
n
413
GLY
1103
A
ASP
1104
n
414
ASP
1104
A
GLU
1105
n
415
GLU
1105
A
ARG
1106
n
416
ARG
1106
A
PRO
1107
n
417
PRO
1107
A
LEU
1108
n
418
LEU
1108
A
LEU
1109
n
419
LEU
1109
A
VAL
1110
n
420
VAL
1110
A
LYS
1111
n
421
LYS
1111
A
GLY
1112
n
422
GLY
1112
A
THR
1113
n
423
THR
1113
A
LEU
1114
n
424
LEU
1114
A
ILE
1115
n
425
ILE
1115
A
ALA
1116
n
426
ALA
1116
A
ILE
1117
n
427
ILE
1117
A
ASP
1118
n
428
ASP
1118
A
1.5160
-0.4660
0.7137
0.8961
-0.4693
4.5187
-0.1467
-0.1397
0.0316
-0.2458
-0.1717
-0.1775
0.0323
0.3820
0.1855
0.6542
-0.2953
-0.0097
0.8659
-0.0539
0.8004
refined
155.7479
150.1085
33.3301
X-RAY DIFFRACTION
A
691
A
1118
X-RAY DIFFRACTION
1
ALL
A
1
A
1205
X-RAY DIFFRACTION
1
ALL
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
695
A
N
ILE
5
A
O
MET
733
A
O
MET
43
A
N
LEU
734
A
N
LEU
44
A
O
LYS
743
A
O
LYS
53
A
N
TYR
762
A
N
TYR
72
A
O
VAL
849
A
O
VAL
159
A
N
ARG
848
A
N
ARG
158
A
O
GLU
907
A
O
GLU
217
A
N
ILE
906
A
N
ILE
216
A
O
ALA
914
A
O
ALA
224
A
O
LEU
875
A
O
LEU
185
A
N
LEU
859
A
N
LEU
169
A
O
VAL
849
A
O
VAL
159
A
N
TYR
762
A
N
TYR
72
A
N
LEU
754
A
N
LEU
64
A
O
ALA
1001
A
O
ALA
311
A
O
PHE
1002
A
O
PHE
312
A
N
THR
989
A
N
THR
299
A
O
LYS
988
A
O
LYS
298
A
N
ARG
985
A
N
ARG
295
A
N
THR
703
A
N
THR
13
A
O
ARG
714
A
O
ARG
24
A
N
GLY
717
A
N
GLY
27
A
O
PHE
1015
A
O
PHE
325
A
O
THR
1012
A
O
THR
322
A
N
SER
889
A
N
SER
199
A
O
VAL
888
A
O
VAL
198
A
N
ARG
881
A
N
ARG
191
A
N
ARG
776
A
N
ARG
86
A
O
CYS
832
A
O
CYS
142
A
O
LEU
833
A
O
LEU
143
A
N
PHE
815
A
N
PHE
125
A
N
ARG
933
A
N
ARG
243
A
O
LEU
948
A
O
LEU
258
A
N
SER
955
A
N
SER
265
A
O
THR
966
A
O
THR
276
A
N
THR
1037
A
N
THR
347
A
O
ARG
1047
A
O
ARG
357
A
N
ALA
1046
A
N
ALA
356
A
O
LEU
1086
A
O
LEU
396
A
O
LEU
1073
A
O
LEU
383
A
N
LEU
1060
A
N
LEU
370
A
N
SER
1061
A
N
SER
371
A
O
SER
1100
A
O
SER
410
A
N
PHE
1097
A
N
PHE
407
A
O
LEU
1108
A
O
LEU
418
1
A
A
OD1
CG1
ASN
VAL
710
1023
1.51
1
A
A
OD1
CB
ASN
VAL
710
1023
1.77
1
A
A
SER
LEU
980
981
-143.84
1
A
A
ASP
PHE
1021
1022
106.40
1
A
A
PHE
VAL
1022
1023
107.84
1
A
VAL
709
58.24
-58.79
1
A
HIS
784
-101.66
-165.04
1
A
CYS
788
-66.22
-74.92
1
A
SER
790
-92.49
42.85
1
A
PHE
800
-118.09
57.56
1
A
SER
831
-68.45
-172.41
1
A
LYS
844
-95.75
49.30
1
A
LYS
911
-131.83
-52.90
1
A
GLU
918
-175.40
137.11
1
A
MET
959
-114.79
78.67
1
A
ILE
960
60.80
-104.77
1
A
ASN
968
-105.99
71.76
1
A
ASN
986
50.24
-132.88
1
A
ASP
1016
-107.88
70.70
1
A
PHE
1022
128.37
80.17
1
A
VAL
1023
37.34
-177.27
1
A
LEU
1034
-95.15
-71.27
1
A
ASN
1077
-64.62
79.58
1
A
THR
1089
-146.06
33.26
1
A
GLU
1094
-156.37
75.17
465.240
173.1681
20.000
0.3112
0.2593
0.2617
4.1500
19.9880
245
5337
5331
4.6000
99.8500
1.000
1.000
0.6472
0.5500
1
1.390
MOLECULAR REPLACEMENT
38.3100
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
4.1500
19.9880
5
3257
0
0
3252
0.004
3316
0.798
4463
0.050
503
0.003
582
12.511
1191
0.3602
0.2749
5.2132
128
2467
2595
2
100.0000
0.2940
0.2544
19.9883
117
2619
2736
2
100.0000
4.150
40.000
4HJC
5449
5438
2.8
1.4
0.075
0.714
1
5.000
12.600
99.800
4.150
4.220
263
0.461
1
13.500
100.000
4.220
4.300
264
0.464
1
13.100
100.000
0.782
4.300
4.380
260
0.478
1
13.100
100.000
0.711
4.380
4.470
259
0.498
1
12.800
99.600
0.483
4.470
4.570
264
0.481
1
12.200
100.000
0.462
4.570
4.670
255
0.509
1
13.100
100.000
0.330
4.670
4.790
270
0.482
1
13.100
100.000
0.318
4.790
4.920
260
0.517
1
13.400
100.000
0.299
4.920
5.060
266
0.522
1
12.700
100.000
0.263
5.060
5.230
271
0.526
1
12.000
100.000
0.216
5.230
5.410
265
0.603
1
13.600
100.000
0.195
5.410
5.630
264
0.585
1
13.300
100.000
0.195
5.630
5.880
274
0.588
1
12.800
100.000
0.161
5.880
6.190
271
0.653
1
11.900
100.000
0.141
6.190
6.580
272
0.698
1
13.000
100.000
0.101
6.580
7.090
284
0.831
1
12.600
99.600
0.078
7.090
7.790
268
0.921
1
12.000
100.000
0.060
7.790
8.910
292
1.201
1
12.500
99.700
0.050
8.910
11.190
290
1.697
1
11.400
100.000
0.037
11.190
40.000
326
1.615
1
10.300
98.200
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.8_1069
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
HKL-2000
data reduction
DENZO
Envelope glycoprotein
Crystal structure of glycoprotein C from Rift Valley Fever Virus (non-glycosylated)
1
N
N
2
N
N
A
SER
797
A
SER
107
HELX_P
A
SER
801
A
SER
111
5
1
5
A
GLY
820
A
GLY
130
HELX_P
A
GLY
824
A
GLY
134
5
2
5
A
GLY
899
A
GLY
209
HELX_P
A
PHE
903
A
PHE
213
5
3
5
A
SER
936
A
SER
246
HELX_P
A
ALA
943
A
ALA
253
1
4
8
A
ASP
971
A
ASP
281
HELX_P
A
GLY
979
A
GLY
289
1
5
9
disulf
2.030
A
CYS
691
A
SG
CYS
1
1_555
A
CYS
731
A
SG
CYS
41
1_555
disulf
2.031
A
CYS
704
A
SG
CYS
14
1_555
A
CYS
713
A
SG
CYS
23
1_555
disulf
2.030
A
CYS
756
A
SG
CYS
66
1_555
A
CYS
852
A
SG
CYS
162
1_555
disulf
2.034
A
CYS
771
A
SG
CYS
81
1_555
A
CYS
965
A
SG
CYS
275
1_555
disulf
2.032
A
CYS
777
A
SG
CYS
87
1_555
A
CYS
825
A
SG
CYS
135
1_555
disulf
2.029
A
CYS
783
A
SG
CYS
93
1_555
A
CYS
832
A
SG
CYS
142
1_555
disulf
2.032
A
CYS
788
A
SG
CYS
98
1_555
A
CYS
814
A
SG
CYS
124
1_555
disulf
2.031
A
CYS
818
A
SG
CYS
128
1_555
A
CYS
823
A
SG
CYS
133
1_555
disulf
2.029
A
CYS
934
A
SG
CYS
244
1_555
A
CYS
947
A
SG
CYS
257
1_555
disulf
2.030
A
CYS
1029
A
SG
CYS
339
1_555
A
CYS
1101
A
SG
CYS
411
1_555
disulf
2.029
A
CYS
1039
A
SG
CYS
349
1_555
A
CYS
1042
A
SG
CYS
352
1_555
disulf
2.033
A
CYS
1049
A
SG
CYS
359
1_555
A
CYS
1083
A
SG
CYS
393
1_555
VIRAL PROTEIN
virus entry, class II fusion protein, membrane fusion, viral membrane, viral protein
A2T075_RVFV
UNP
1
691
A2T075
CSELIQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCREGQSYWTGSFSPK
CLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMRENKCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVF
NCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPGKGYAIVDEPFSEIPRQGFLG
EIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQAFSKGSVQAD
LTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTV
PEVEEEFMYSCDGDERPLLVKGTLIAID
691
1118
4HJC
691
1118
A2T075
A
1
1
428
6
6
5
3
2
2
3
4
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
693
A
GLU
3
A
GLN
696
A
GLN
6
A
GLU
729
A
GLU
39
A
LYS
735
A
LYS
45
A
THR
742
A
THR
52
A
THR
764
A
THR
74
A
LEU
847
A
LEU
157
A
THR
864
A
THR
174
A
SER
904
A
SER
214
A
SER
908
A
SER
218
A
GLY
912
A
GLY
222
A
VAL
916
A
VAL
226
A
VAL
870
A
VAL
180
A
LEU
875
A
LEU
185
A
LEU
847
A
LEU
157
A
THR
864
A
THR
174
A
THR
742
A
THR
52
A
THR
764
A
THR
74
A
VAL
999
A
VAL
309
A
SER
1003
A
SER
313
A
LYS
988
A
LYS
298
A
ALA
992
A
ALA
302
A
GLN
983
A
GLN
293
A
ARG
985
A
ARG
295
A
THR
702
A
THR
12
A
THR
706
A
THR
16
A
THR
711
A
THR
21
A
ARG
722
A
ARG
32
A
ALA
1009
A
ALA
319
A
ASP
1021
A
ASP
331
A
GLY
886
A
GLY
196
A
ASP
893
A
ASP
203
A
SER
880
A
SER
190
A
PHE
882
A
PHE
192
A
PHE
767
A
PHE
77
A
ARG
776
A
ARG
86
A
CYS
832
A
CYS
142
A
SER
841
A
SER
151
A
ARG
810
A
ARG
120
A
PHE
815
A
PHE
125
A
ILE
932
A
ILE
242
A
ARG
933
A
ARG
243
A
LEU
948
A
LEU
258
A
ARG
949
A
ARG
259
A
ILE
954
A
ILE
264
A
MET
959
A
MET
269
A
GLN
962
A
GLN
272
A
THR
967
A
THR
277
A
ASP
1030
A
ASP
340
A
GLY
1038
A
GLY
348
A
ALA
1046
A
ALA
356
A
SER
1054
A
SER
364
A
GLY
1078
A
GLY
388
A
LEU
1086
A
LEU
396
A
HIS
1070
A
HIS
380
A
SER
1075
A
SER
385
A
GLY
1058
A
GLY
368
A
ASN
1064
A
ASN
374
A
GLU
1092
A
GLU
402
A
SER
1100
A
SER
410
A
ARG
1106
A
ARG
416
A
THR
1113
A
THR
423
181
P 64 2 2