0.010190
0.000000
0.000000
0.000000
0.010190
0.000000
0.000000
0.000000
0.004955
0.00000
0.00000
0.00000
Nowak, E.
Potrzebowski, W.
Konarev, P.V.
Rausch, J.W.
Bona, M.K.
Svergun, D.I.
Bujnicki, J.M.
Le Grice, S.F.J.
Nowotny, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
98.132
98.132
201.824
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
N
N
52
S
C
N
53
N
C
N
54
N
O
N
55
N
C
N
56
N
C
N
57
N
C
N
58
N
N
N
59
N
C
N
60
N
N
N
61
N
N
N
62
N
O
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
N
N
79
S
C
N
80
N
C
N
81
N
O
N
82
N
C
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
O
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
C
N
117
R
C
N
118
N
O
N
119
S
C
N
120
N
O
N
121
R
C
N
122
N
O
N
123
R
C
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
C
N
129
N
N
N
130
N
C
N
131
N
C
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
R
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
S
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
C
N
166
R
C
N
167
N
O
N
168
S
C
N
169
N
O
N
170
N
C
N
171
R
C
Y
172
N
N
Y
173
N
C
Y
174
N
N
Y
175
N
C
Y
176
N
C
N
177
N
N
Y
178
N
N
Y
179
N
C
Y
180
N
N
Y
181
N
C
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
O
N
197
N
P
N
198
N
O
N
199
N
O
N
200
N
O
N
201
N
C
N
202
R
C
N
203
N
O
N
204
S
C
N
205
N
O
N
206
N
C
N
207
R
C
N
208
N
N
N
209
N
C
N
210
N
O
N
211
N
N
N
212
N
C
N
213
N
N
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
O
N
231
N
P
N
232
N
O
N
233
N
O
N
234
N
O
N
235
N
C
N
236
R
C
N
237
N
O
N
238
S
C
N
239
N
O
N
240
N
C
N
241
R
C
Y
242
N
N
Y
243
N
C
Y
244
N
N
Y
245
N
C
N
246
N
C
N
247
N
O
N
248
N
N
N
249
N
C
N
250
N
N
N
251
N
N
Y
252
N
C
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
O
N
268
N
P
N
269
N
O
N
270
N
O
N
271
N
O
N
272
N
C
N
273
R
C
N
274
N
O
N
275
S
C
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
N
N
280
N
C
N
281
N
O
N
282
N
N
N
283
N
C
N
284
N
O
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
O
N
304
N
P
N
305
N
O
N
306
N
O
N
307
N
O
N
308
N
C
N
309
R
C
N
310
N
O
N
311
S
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
R
C
Y
316
N
N
Y
317
N
C
Y
318
N
N
Y
319
N
C
N
320
N
C
N
321
N
O
N
322
N
N
N
323
N
C
N
324
N
N
N
325
N
N
Y
326
N
C
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
C
N
347
N
C
N
348
N
O
N
349
N
N
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
C
N
367
N
C
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
N
C
N
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
N
Y
397
N
C
Y
398
N
C
Y
399
N
N
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
S
C
N
419
N
C
N
420
N
C
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
N
N
437
S
C
N
438
N
C
N
439
N
O
N
440
N
C
N
441
N
C
N
442
N
C
N
443
N
C
N
444
N
O
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
N
N
459
S
C
N
460
N
C
N
461
N
O
N
462
N
C
N
463
N
C
N
464
N
C
N
465
N
C
N
466
N
N
N
467
N
O
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
N
C
N
488
N
C
N
489
N
S
N
490
N
C
N
491
N
O
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
N
N
504
S
C
N
505
N
C
N
506
N
O
N
507
N
C
Y
508
N
C
Y
509
N
C
Y
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
N
N
527
S
C
N
528
N
C
N
529
N
O
N
530
N
C
N
531
N
C
N
532
N
C
N
533
N
O
N
534
N
H
N
535
N
H
N
536
N
H
N
537
N
H
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
N
N
544
S
C
N
545
N
C
N
546
N
O
N
547
N
C
N
548
N
O
N
549
N
O
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
H
N
556
N
H
N
557
N
N
N
558
S
C
N
559
N
C
N
560
N
O
N
561
R
C
N
562
N
O
N
563
N
C
N
564
N
O
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
N
N
575
S
C
N
576
N
C
N
577
N
O
N
578
N
C
Y
579
N
C
Y
580
N
C
Y
581
N
C
Y
582
N
N
Y
583
N
C
Y
584
N
C
Y
585
N
C
Y
586
N
C
Y
587
N
C
N
588
N
O
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
H
N
597
N
H
N
598
N
H
N
599
N
H
N
600
N
H
N
601
N
N
N
602
S
C
N
603
N
C
N
604
N
O
N
605
N
C
Y
606
N
C
Y
607
N
C
Y
608
N
C
Y
609
N
C
Y
610
N
C
Y
611
N
C
N
612
N
O
N
613
N
O
N
614
N
H
N
615
N
H
N
616
N
H
N
617
N
H
N
618
N
H
N
619
N
H
N
620
N
H
N
621
N
H
N
622
N
H
N
623
N
H
N
624
N
H
N
625
N
O
N
626
N
P
N
627
N
O
N
628
N
O
N
629
N
O
N
630
N
C
N
631
R
C
N
632
N
O
N
633
S
C
N
634
N
O
N
635
R
C
N
636
N
O
N
637
R
C
N
638
N
N
N
639
N
C
N
640
N
O
N
641
N
N
N
642
N
C
N
643
N
O
N
644
N
C
N
645
N
C
N
646
N
H
N
647
N
H
N
648
N
H
N
649
N
H
N
650
N
H
N
651
N
H
N
652
N
H
N
653
N
H
N
654
N
H
N
655
N
H
N
656
N
H
N
657
N
H
N
658
N
H
N
659
N
N
N
660
S
C
N
661
N
C
N
662
N
O
N
663
N
C
N
664
N
C
N
665
N
C
N
666
N
O
N
667
N
H
N
668
N
H
N
669
N
H
N
670
N
H
N
671
N
H
N
672
N
H
N
673
N
H
N
674
N
H
N
675
N
H
N
676
N
H
N
677
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
Y
181
N
sing
Y
182
N
sing
Y
183
N
doub
N
184
N
sing
Y
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
sing
Y
189
N
doub
N
190
N
sing
N
191
N
sing
Y
192
N
sing
Y
193
N
doub
N
194
N
sing
Y
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
Y
254
N
sing
Y
255
N
sing
Y
256
N
doub
N
257
N
sing
Y
258
N
sing
N
259
N
sing
Y
260
N
doub
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
Y
331
N
sing
Y
332
N
sing
Y
333
N
doub
N
334
N
sing
Y
335
N
sing
N
336
N
sing
Y
337
N
doub
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
Y
404
N
sing
Y
405
N
doub
Y
406
N
doub
N
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
doub
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
doub
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
doub
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
Y
512
N
doub
Y
513
N
sing
Y
514
N
sing
N
515
N
sing
Y
516
N
doub
N
517
N
sing
Y
518
N
doub
N
519
N
sing
Y
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
doub
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
doub
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
N
559
N
sing
N
560
N
doub
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
doub
N
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
Y
581
N
doub
Y
582
N
sing
Y
583
N
sing
N
584
N
sing
Y
585
N
doub
Y
586
N
sing
Y
587
N
sing
N
588
N
sing
Y
589
N
sing
Y
590
N
doub
N
591
N
sing
Y
592
N
doub
N
593
N
sing
Y
594
N
sing
N
595
N
sing
N
596
N
sing
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
N
601
N
sing
N
602
N
sing
N
603
N
sing
N
604
N
doub
N
605
N
sing
N
606
N
sing
N
607
N
sing
N
608
N
sing
Y
609
N
doub
Y
610
N
sing
Y
611
N
sing
N
612
N
sing
Y
613
N
doub
N
614
N
sing
Y
615
N
doub
N
616
N
sing
Y
617
N
sing
N
618
N
sing
N
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
sing
N
624
N
doub
N
625
N
sing
N
626
N
sing
N
627
N
sing
N
628
N
sing
N
629
N
sing
N
630
N
sing
N
631
N
sing
N
632
N
sing
N
633
N
sing
N
634
N
sing
N
635
N
sing
N
636
N
sing
N
637
N
sing
N
638
N
sing
N
639
N
sing
N
640
N
sing
N
641
N
sing
N
642
N
sing
N
643
N
sing
N
644
N
sing
N
645
N
sing
N
646
N
sing
N
647
N
sing
N
648
N
doub
N
649
N
sing
N
650
N
sing
N
651
N
sing
N
652
N
doub
N
653
N
sing
N
654
N
doub
N
655
N
sing
N
656
N
sing
N
657
N
sing
N
658
N
sing
N
659
N
sing
N
660
N
sing
N
661
N
sing
N
662
N
sing
N
663
N
doub
N
664
N
sing
N
665
N
sing
N
666
N
sing
N
667
N
sing
N
668
N
sing
N
669
N
sing
N
670
N
sing
N
671
N
sing
N
672
N
sing
N
673
N
sing
N
674
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
41
3874
3887
10.1093/nar/gkt053
23382176
Structural analysis of monomeric retroviral reverse transcriptase in complex with an RNA/DNA hybrid
2013
10.2210/pdb4hkq/pdb
pdb_00004hkq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
CCD
2011-11-14
MARMOSAIC 225 mm CCD
CCD
MARMOSAIC 225 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
1
0.872
1.0
0.979
1.0
ID23-2
ESRF
0.872
SYNCHROTRON
ESRF BEAMLINE ID23-2
14.1
BESSY
0.979
SYNCHROTRON
BESSY BEAMLINE 14.1
76202.523
Reverse transcriptase/ribonuclease H p80
2.7.7.49, 2.7.7.7, 3.1.26.4
Reverse Transcriptase, UNP residues 658-1328
D583N
1
man
polymer
7981.820
RNA (5'-R(*AP*AP*CP*AP*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*CP*AP*U)-3')
1
syn
polymer
6783.375
DNA (5'-D(*TP*GP*GP*AP*AP*TP*CP*A*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*CP*TP*G)-3')
1
syn
polymer
18.015
water
37
nat
water
RT
no
no
MSHHHHHHSATLNIEDEYRLHETSKEPDVPLGSTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEA
RLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLD
LKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAA
TSEQDCQRGTRALLQTLGNLGYRASAKKAQICQKQVKYLGYLLKEGQRWLTEARKETVMGQPTPKTPRQLREFLGTAGFC
RLWIPGFAEMAAPLYPLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQKLGPWRR
PVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVILAPHAVEALVKQPPDRWLSNARMTHYQAMLLDTDRV
QFGPVVALNPATLLPLPEKEAPHDCLEILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWAR
ALPAGTSAQRAELIALTQALKMAEGKKLNVYTNSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRL
SIIHCPGHQKGNSAEARGNRMADQAAREAAMKAVLETSTLL
MSHHHHHHSATLNIEDEYRLHETSKEPDVPLGSTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEA
RLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLD
LKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAA
TSEQDCQRGTRALLQTLGNLGYRASAKKAQICQKQVKYLGYLLKEGQRWLTEARKETVMGQPTPKTPRQLREFLGTAGFC
RLWIPGFAEMAAPLYPLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQKLGPWRR
PVAYLSKKLDPVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVILAPHAVEALVKQPPDRWLSNARMTHYQAMLLDTDRV
QFGPVVALNPATLLPLPEKEAPHDCLEILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWAR
ALPAGTSAQRAELIALTQALKMAEGKKLNVYTNSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRL
SIIHCPGHQKGNSAEARGNRMADQAAREAAMKAVLETSTLL
A
polypeptide(L)
no
no
AACAGAGUGCGACACCUGAUUCCAU
AACAGAGUGCGACACCUGAUUCCAU
E
polyribonucleotide
no
no
(DT)(DG)(DG)(DA)(DA)(DT)(DC)(DA)(DG)(DG)(DT)(DG)(DT)(DC)(DG)(DC)(DA)(DC)(DT)(DC)
(DT)(DG)
TGGAATCAGGTGTCGCACTCTG
F
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
XMRV
VP62
sample
373193
Xenotropic MuLV-related virus
562
Escherichia coli
Bl21(DE3) Magic
Plasmid
pDEST14
2
2.67
53.94
VAPOR DIFFUSION, HANGING DROP
5.0
17% PEG 3350, 0.1M Bis-Tris, 0.2M Ammonium Sulfate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
292
-0.772
1
19
E
3
F
47
-0.157
E_C3:DG47_F
1
-13.518
-0.150
-0.632
-0.257
2.990
1
20
E
4
F
46
1.886
E_A4:DT46_F
2
-5.293
0.052
0.241
-0.140
4.652
1
19
E
5
F
45
2.116
E_G5:DC45_F
3
-5.466
-0.347
-0.059
-0.193
-11.061
1
20
E
6
F
44
5.008
E_A6:DT44_F
4
-15.311
-0.388
-0.446
-0.206
-7.529
1
19
E
7
F
43
3.476
E_G7:DC43_F
5
-6.638
-0.103
0.128
-0.123
-3.483
1
20
E
8
F
42
4.435
E_U8:DA42_F
6
-13.456
0.188
0.024
-0.153
-13.906
1
19
E
9
F
41
-1.945
E_G9:DC41_F
7
-3.836
0.556
-0.684
-0.215
-2.358
1
19
E
10
F
40
3.852
E_C10:DG40_F
8
-10.142
0.018
-0.013
-0.223
5.278
1
19
E
11
F
39
3.438
E_G11:DC39_F
9
-17.165
0.013
0.416
-0.223
14.363
1
20
E
12
F
38
-4.757
E_A12:DT38_F
10
-23.437
0.500
0.706
-0.231
26.940
1
19
E
13
F
37
-4.758
E_C13:DG37_F
11
-21.459
-0.114
0.274
-0.049
23.605
1
20
E
14
F
36
-4.258
E_A14:DT36_F
12
-13.060
0.154
0.594
-0.071
-5.015
1
19
E
15
F
35
-2.012
E_C15:DG35_F
13
-11.882
0.486
0.159
-0.156
-11.302
1
19
E
16
F
34
-4.626
E_C16:DG34_F
14
22.705
-0.527
-0.037
-0.227
2.650
33.476
E
E
3
4
23.235
F
F
47
46
3.248
12.870
-0.375
-0.871
EE_C3A4:DT46DG47_FF
1
-9.375
16.926
29.542
-3.554
-0.836
3.252
28.052
E
E
4
5
1.132
F
F
46
45
3.251
0.548
0.561
-1.583
EE_A4G5:DC45DT46_FF
2
2.108
-4.354
27.969
-3.395
-0.663
2.700
33.464
E
E
5
6
22.380
F
F
45
44
3.631
12.570
0.553
-1.941
EE_G5A6:DT44DC45_FF
3
2.885
-5.136
30.944
-5.462
-0.481
3.177
31.884
E
E
6
7
5.804
F
F
44
43
3.321
3.177
-0.679
-1.854
EE_A6G7:DC43DT44_FF
4
-3.362
6.140
31.555
-3.952
0.626
2.576
30.995
E
E
7
8
26.302
F
F
43
42
3.278
13.587
0.268
-0.917
EE_G7U8:DA42DC43_FF
5
2.236
-4.329
27.835
-4.193
-0.094
3.401
36.818
E
E
8
9
8.818
F
F
42
41
3.624
5.547
-0.773
-0.972
EE_U8G9:DC41DA42_FF
6
1.919
-3.050
36.363
-2.354
1.506
3.100
28.008
E
E
9
10
0.152
F
F
41
40
3.139
0.073
0.305
-1.483
EE_G9C10:DG40DC41_FF
7
-2.341
4.842
27.912
-3.080
-1.160
2.867
30.507
E
E
10
11
4.208
F
F
40
39
2.998
2.211
0.310
-1.484
EE_C10G11:DC39DG40_FF
8
-1.488
2.832
30.393
-3.216
-0.855
3.051
35.045
E
E
11
12
-0.519
F
F
39
38
2.912
-0.312
-1.135
-1.804
EE_G11A12:DT38DC39_FF
9
-4.708
7.841
34.736
-2.953
1.238
2.876
32.363
E
E
12
13
-0.166
F
F
38
37
2.863
-0.093
-0.218
-1.902
EE_A12C13:DG37DT38_FF
10
-2.933
5.270
32.233
-3.399
-0.064
3.895
36.426
E
E
13
14
-21.604
F
F
37
36
3.614
-13.204
1.054
-1.696
EE_C13A14:DT36DG37_FF
11
-2.665
4.360
33.922
-0.527
-2.128
4.439
34.056
E
E
14
15
-3.650
F
F
36
35
4.286
-2.122
0.363
-2.845
EE_A14C15:DG35DT36_FF
12
6.834
-11.751
33.318
-4.402
0.847
3.523
22.739
E
E
15
16
0.640
F
F
35
34
3.597
0.249
0.304
-2.501
EE_C15C16:DG34DG35_FF
13
6.080
-15.606
21.920
-6.442
1.656
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Database references
Structure summary
Data collection
Database references
Refinement description
1
0
2013-02-20
1
1
2013-07-03
1
2
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
PDBJ
2012-10-15
REL
REL
HOH
water
Random sequence for RNA
sample
Random sequence for DNA
sample
1RW3
PDB
experimental model
HOH
13
4
HOH
HOH
701
A
HOH
15
4
HOH
HOH
702
A
HOH
22
4
HOH
HOH
703
A
HOH
24
4
HOH
HOH
704
A
HOH
25
4
HOH
HOH
705
A
HOH
33
4
HOH
HOH
706
A
HOH
35
4
HOH
HOH
707
A
HOH
40
4
HOH
HOH
708
A
HOH
42
4
HOH
HOH
709
A
HOH
44
4
HOH
HOH
710
A
HOH
45
4
HOH
HOH
711
A
HOH
65
4
HOH
HOH
712
A
HOH
75
4
HOH
HOH
713
A
HOH
81
4
HOH
HOH
714
A
HOH
105
4
HOH
HOH
715
A
HOH
106
4
HOH
HOH
716
A
HOH
172
4
HOH
HOH
717
A
HOH
201
4
HOH
HOH
718
A
HOH
102
4
HOH
HOH
719
A
HOH
203
4
HOH
HOH
720
A
HOH
204
4
HOH
HOH
721
A
HOH
205
4
HOH
HOH
722
A
HOH
206
4
HOH
HOH
723
A
HOH
207
4
HOH
HOH
724
A
HOH
208
4
HOH
HOH
725
A
HOH
209
4
HOH
HOH
726
A
HOH
211
4
HOH
HOH
727
A
HOH
212
4
HOH
HOH
728
A
HOH
213
4
HOH
HOH
729
A
HOH
214
4
HOH
HOH
730
A
HOH
215
4
HOH
HOH
731
A
HOH
10
4
HOH
HOH
101
E
HOH
99
4
HOH
HOH
102
E
HOH
123
4
HOH
HOH
103
E
HOH
36
4
HOH
HOH
101
F
HOH
62
4
HOH
HOH
102
F
HOH
108
4
HOH
HOH
103
F
n
1
-9
A
n
2
-8
A
n
3
-7
A
n
4
-6
A
n
5
-5
A
n
6
-4
A
n
7
-3
A
n
8
-2
A
n
9
-1
A
n
10
0
A
n
11
1
A
n
12
2
A
n
13
3
A
n
14
4
A
n
15
5
A
n
16
6
A
n
17
7
A
n
18
8
A
n
19
9
A
n
20
10
A
n
21
11
A
n
22
12
A
n
23
13
A
n
24
14
A
n
25
15
A
n
26
16
A
n
27
17
A
n
28
18
A
n
29
19
A
n
30
20
A
n
31
21
A
n
32
22
A
n
33
23
A
n
34
24
A
n
35
25
A
n
36
26
A
n
37
27
A
ASP
28
n
38
ASP
28
A
PHE
29
n
39
PHE
29
A
PRO
30
n
40
PRO
30
A
GLN
31
n
41
GLN
31
A
ALA
32
n
42
ALA
32
A
TRP
33
n
43
TRP
33
A
ALA
34
n
44
ALA
34
A
GLU
35
n
45
GLU
35
A
THR
36
n
46
THR
36
A
GLY
37
n
47
GLY
37
A
GLY
38
n
48
GLY
38
A
MET
39
n
49
MET
39
A
GLY
40
n
50
GLY
40
A
LEU
41
n
51
LEU
41
A
ALA
42
n
52
ALA
42
A
VAL
43
n
53
VAL
43
A
ARG
44
n
54
ARG
44
A
GLN
45
n
55
GLN
45
A
ALA
46
n
56
ALA
46
A
PRO
47
n
57
PRO
47
A
LEU
48
n
58
LEU
48
A
ILE
49
n
59
ILE
49
A
ILE
50
n
60
ILE
50
A
PRO
51
n
61
PRO
51
A
LEU
52
n
62
LEU
52
A
LYS
53
n
63
LYS
53
A
ALA
54
n
64
ALA
54
A
THR
55
n
65
THR
55
A
SER
56
n
66
SER
56
A
THR
57
n
67
THR
57
A
PRO
58
n
68
PRO
58
A
VAL
59
n
69
VAL
59
A
SER
60
n
70
SER
60
A
ILE
61
n
71
ILE
61
A
LYS
62
n
72
LYS
62
A
GLN
63
n
73
GLN
63
A
TYR
64
n
74
TYR
64
A
PRO
65
n
75
PRO
65
A
MET
66
n
76
MET
66
A
SER
67
n
77
SER
67
A
GLN
68
n
78
GLN
68
A
GLU
69
n
79
GLU
69
A
ALA
70
n
80
ALA
70
A
ARG
71
n
81
ARG
71
A
LEU
72
n
82
LEU
72
A
GLY
73
n
83
GLY
73
A
ILE
74
n
84
ILE
74
A
LYS
75
n
85
LYS
75
A
PRO
76
n
86
PRO
76
A
HIS
77
n
87
HIS
77
A
ILE
78
n
88
ILE
78
A
GLN
79
n
89
GLN
79
A
ARG
80
n
90
ARG
80
A
LEU
81
n
91
LEU
81
A
LEU
82
n
92
LEU
82
A
ASP
83
n
93
ASP
83
A
GLN
84
n
94
GLN
84
A
GLY
85
n
95
GLY
85
A
ILE
86
n
96
ILE
86
A
LEU
87
n
97
LEU
87
A
VAL
88
n
98
VAL
88
A
PRO
89
n
99
PRO
89
A
CYS
90
n
100
CYS
90
A
GLN
91
n
101
GLN
91
A
SER
92
n
102
SER
92
A
PRO
93
n
103
PRO
93
A
TRP
94
n
104
TRP
94
A
ASN
95
n
105
ASN
95
A
THR
96
n
106
THR
96
A
PRO
97
n
107
PRO
97
A
LEU
98
n
108
LEU
98
A
LEU
99
n
109
LEU
99
A
PRO
100
n
110
PRO
100
A
VAL
101
n
111
VAL
101
A
LYS
102
n
112
LYS
102
A
LYS
103
n
113
LYS
103
A
n
114
104
A
n
115
105
A
n
116
106
A
n
117
107
A
ASP
108
n
118
ASP
108
A
TYR
109
n
119
TYR
109
A
ARG
110
n
120
ARG
110
A
PRO
111
n
121
PRO
111
A
VAL
112
n
122
VAL
112
A
GLN
113
n
123
GLN
113
A
ASP
114
n
124
ASP
114
A
LEU
115
n
125
LEU
115
A
ARG
116
n
126
ARG
116
A
GLU
117
n
127
GLU
117
A
VAL
118
n
128
VAL
118
A
ASN
119
n
129
ASN
119
A
LYS
120
n
130
LYS
120
A
ARG
121
n
131
ARG
121
A
VAL
122
n
132
VAL
122
A
GLU
123
n
133
GLU
123
A
ASP
124
n
134
ASP
124
A
ILE
125
n
135
ILE
125
A
HIS
126
n
136
HIS
126
A
PRO
127
n
137
PRO
127
A
THR
128
n
138
THR
128
A
VAL
129
n
139
VAL
129
A
PRO
130
n
140
PRO
130
A
ASN
131
n
141
ASN
131
A
PRO
132
n
142
PRO
132
A
TYR
133
n
143
TYR
133
A
ASN
134
n
144
ASN
134
A
LEU
135
n
145
LEU
135
A
LEU
136
n
146
LEU
136
A
SER
137
n
147
SER
137
A
GLY
138
n
148
GLY
138
A
LEU
139
n
149
LEU
139
A
PRO
140
n
150
PRO
140
A
PRO
141
n
151
PRO
141
A
SER
142
n
152
SER
142
A
HIS
143
n
153
HIS
143
A
GLN
144
n
154
GLN
144
A
TRP
145
n
155
TRP
145
A
TYR
146
n
156
TYR
146
A
THR
147
n
157
THR
147
A
VAL
148
n
158
VAL
148
A
LEU
149
n
159
LEU
149
A
ASP
150
n
160
ASP
150
A
LEU
151
n
161
LEU
151
A
LYS
152
n
162
LYS
152
A
ASP
153
n
163
ASP
153
A
ALA
154
n
164
ALA
154
A
PHE
155
n
165
PHE
155
A
PHE
156
n
166
PHE
156
A
CYS
157
n
167
CYS
157
A
LEU
158
n
168
LEU
158
A
ARG
159
n
169
ARG
159
A
LEU
160
n
170
LEU
160
A
HIS
161
n
171
HIS
161
A
PRO
162
n
172
PRO
162
A
THR
163
n
173
THR
163
A
SER
164
n
174
SER
164
A
GLN
165
n
175
GLN
165
A
PRO
166
n
176
PRO
166
A
LEU
167
n
177
LEU
167
A
PHE
168
n
178
PHE
168
A
ALA
169
n
179
ALA
169
A
PHE
170
n
180
PHE
170
A
GLU
171
n
181
GLU
171
A
TRP
172
n
182
TRP
172
A
ARG
173
n
183
ARG
173
A
ASP
174
n
184
ASP
174
A
n
185
175
A
n
186
176
A
n
187
177
A
n
188
178
A
n
189
179
A
n
190
180
A
n
191
181
A
GLN
182
n
192
GLN
182
A
LEU
183
n
193
LEU
183
A
THR
184
n
194
THR
184
A
TRP
185
n
195
TRP
185
A
THR
186
n
196
THR
186
A
ARG
187
n
197
ARG
187
A
LEU
188
n
198
LEU
188
A
PRO
189
n
199
PRO
189
A
GLN
190
n
200
GLN
190
A
GLY
191
n
201
GLY
191
A
PHE
192
n
202
PHE
192
A
LYS
193
n
203
LYS
193
A
ASN
194
n
204
ASN
194
A
SER
195
n
205
SER
195
A
PRO
196
n
206
PRO
196
A
THR
197
n
207
THR
197
A
LEU
198
n
208
LEU
198
A
PHE
199
n
209
PHE
199
A
ASP
200
n
210
ASP
200
A
GLU
201
n
211
GLU
201
A
ALA
202
n
212
ALA
202
A
LEU
203
n
213
LEU
203
A
HIS
204
n
214
HIS
204
A
ARG
205
n
215
ARG
205
A
ASP
206
n
216
ASP
206
A
LEU
207
n
217
LEU
207
A
ALA
208
n
218
ALA
208
A
ASP
209
n
219
ASP
209
A
PHE
210
n
220
PHE
210
A
ARG
211
n
221
ARG
211
A
ILE
212
n
222
ILE
212
A
GLN
213
n
223
GLN
213
A
HIS
214
n
224
HIS
214
A
PRO
215
n
225
PRO
215
A
ASP
216
n
226
ASP
216
A
LEU
217
n
227
LEU
217
A
ILE
218
n
228
ILE
218
A
LEU
219
n
229
LEU
219
A
LEU
220
n
230
LEU
220
A
GLN
221
n
231
GLN
221
A
TYR
222
n
232
TYR
222
A
VAL
223
n
233
VAL
223
A
ASP
224
n
234
ASP
224
A
ASP
225
n
235
ASP
225
A
LEU
226
n
236
LEU
226
A
LEU
227
n
237
LEU
227
A
LEU
228
n
238
LEU
228
A
ALA
229
n
239
ALA
229
A
ALA
230
n
240
ALA
230
A
THR
231
n
241
THR
231
A
SER
232
n
242
SER
232
A
GLU
233
n
243
GLU
233
A
GLN
234
n
244
GLN
234
A
ASP
235
n
245
ASP
235
A
CYS
236
n
246
CYS
236
A
GLN
237
n
247
GLN
237
A
ARG
238
n
248
ARG
238
A
GLY
239
n
249
GLY
239
A
THR
240
n
250
THR
240
A
ARG
241
n
251
ARG
241
A
ALA
242
n
252
ALA
242
A
LEU
243
n
253
LEU
243
A
LEU
244
n
254
LEU
244
A
GLN
245
n
255
GLN
245
A
THR
246
n
256
THR
246
A
LEU
247
n
257
LEU
247
A
GLY
248
n
258
GLY
248
A
ASN
249
n
259
ASN
249
A
LEU
250
n
260
LEU
250
A
GLY
251
n
261
GLY
251
A
TYR
252
n
262
TYR
252
A
ARG
253
n
263
ARG
253
A
ALA
254
n
264
ALA
254
A
SER
255
n
265
SER
255
A
ALA
256
n
266
ALA
256
A
LYS
257
n
267
LYS
257
A
LYS
258
n
268
LYS
258
A
ALA
259
n
269
ALA
259
A
GLN
260
n
270
GLN
260
A
ILE
261
n
271
ILE
261
A
CYS
262
n
272
CYS
262
A
GLN
263
n
273
GLN
263
A
LYS
264
n
274
LYS
264
A
GLN
265
n
275
GLN
265
A
VAL
266
n
276
VAL
266
A
LYS
267
n
277
LYS
267
A
TYR
268
n
278
TYR
268
A
LEU
269
n
279
LEU
269
A
GLY
270
n
280
GLY
270
A
TYR
271
n
281
TYR
271
A
LEU
272
n
282
LEU
272
A
LEU
273
n
283
LEU
273
A
LYS
274
n
284
LYS
274
A
GLU
275
n
285
GLU
275
A
GLY
276
n
286
GLY
276
A
GLN
277
n
287
GLN
277
A
ARG
278
n
288
ARG
278
A
TRP
279
n
289
TRP
279
A
LEU
280
n
290
LEU
280
A
THR
281
n
291
THR
281
A
GLU
282
n
292
GLU
282
A
ALA
283
n
293
ALA
283
A
ARG
284
n
294
ARG
284
A
LYS
285
n
295
LYS
285
A
GLU
286
n
296
GLU
286
A
THR
287
n
297
THR
287
A
VAL
288
n
298
VAL
288
A
MET
289
n
299
MET
289
A
GLY
290
n
300
GLY
290
A
GLN
291
n
301
GLN
291
A
PRO
292
n
302
PRO
292
A
THR
293
n
303
THR
293
A
PRO
294
n
304
PRO
294
A
LYS
295
n
305
LYS
295
A
THR
296
n
306
THR
296
A
PRO
297
n
307
PRO
297
A
ARG
298
n
308
ARG
298
A
GLN
299
n
309
GLN
299
A
LEU
300
n
310
LEU
300
A
ARG
301
n
311
ARG
301
A
GLU
302
n
312
GLU
302
A
PHE
303
n
313
PHE
303
A
LEU
304
n
314
LEU
304
A
GLY
305
n
315
GLY
305
A
THR
306
n
316
THR
306
A
ALA
307
n
317
ALA
307
A
GLY
308
n
318
GLY
308
A
PHE
309
n
319
PHE
309
A
CYS
310
n
320
CYS
310
A
ARG
311
n
321
ARG
311
A
LEU
312
n
322
LEU
312
A
TRP
313
n
323
TRP
313
A
ILE
314
n
324
ILE
314
A
PRO
315
n
325
PRO
315
A
GLY
316
n
326
GLY
316
A
PHE
317
n
327
PHE
317
A
ALA
318
n
328
ALA
318
A
GLU
319
n
329
GLU
319
A
MET
320
n
330
MET
320
A
ALA
321
n
331
ALA
321
A
ALA
322
n
332
ALA
322
A
PRO
323
n
333
PRO
323
A
LEU
324
n
334
LEU
324
A
TYR
325
n
335
TYR
325
A
PRO
326
n
336
PRO
326
A
LEU
327
n
337
LEU
327
A
THR
328
n
338
THR
328
A
LYS
329
n
339
LYS
329
A
n
340
330
A
n
341
331
A
THR
332
n
342
THR
332
A
LEU
333
n
343
LEU
333
A
PHE
334
n
344
PHE
334
A
ASN
335
n
345
ASN
335
A
TRP
336
n
346
TRP
336
A
GLY
337
n
347
GLY
337
A
PRO
338
n
348
PRO
338
A
ASP
339
n
349
ASP
339
A
GLN
340
n
350
GLN
340
A
GLN
341
n
351
GLN
341
A
LYS
342
n
352
LYS
342
A
ALA
343
n
353
ALA
343
A
TYR
344
n
354
TYR
344
A
GLN
345
n
355
GLN
345
A
GLU
346
n
356
GLU
346
A
ILE
347
n
357
ILE
347
A
LYS
348
n
358
LYS
348
A
GLN
349
n
359
GLN
349
A
ALA
350
n
360
ALA
350
A
LEU
351
n
361
LEU
351
A
LEU
352
n
362
LEU
352
A
THR
353
n
363
THR
353
A
ALA
354
n
364
ALA
354
A
PRO
355
n
365
PRO
355
A
ALA
356
n
366
ALA
356
A
LEU
357
n
367
LEU
357
A
GLY
358
n
368
GLY
358
A
LEU
359
n
369
LEU
359
A
PRO
360
n
370
PRO
360
A
ASP
361
n
371
ASP
361
A
LEU
362
n
372
LEU
362
A
THR
363
n
373
THR
363
A
LYS
364
n
374
LYS
364
A
PRO
365
n
375
PRO
365
A
PHE
366
n
376
PHE
366
A
GLU
367
n
377
GLU
367
A
LEU
368
n
378
LEU
368
A
PHE
369
n
379
PHE
369
A
VAL
370
n
380
VAL
370
A
ASP
371
n
381
ASP
371
A
GLU
372
n
382
GLU
372
A
LYS
373
n
383
LYS
373
A
GLN
374
n
384
GLN
374
A
GLY
375
n
385
GLY
375
A
TYR
376
n
386
TYR
376
A
ALA
377
n
387
ALA
377
A
LYS
378
n
388
LYS
378
A
GLY
379
n
389
GLY
379
A
VAL
380
n
390
VAL
380
A
LEU
381
n
391
LEU
381
A
THR
382
n
392
THR
382
A
GLN
383
n
393
GLN
383
A
LYS
384
n
394
LYS
384
A
LEU
385
n
395
LEU
385
A
GLY
386
n
396
GLY
386
A
PRO
387
n
397
PRO
387
A
TRP
388
n
398
TRP
388
A
ARG
389
n
399
ARG
389
A
ARG
390
n
400
ARG
390
A
PRO
391
n
401
PRO
391
A
VAL
392
n
402
VAL
392
A
ALA
393
n
403
ALA
393
A
TYR
394
n
404
TYR
394
A
LEU
395
n
405
LEU
395
A
SER
396
n
406
SER
396
A
LYS
397
n
407
LYS
397
A
LYS
398
n
408
LYS
398
A
LEU
399
n
409
LEU
399
A
ASP
400
n
410
ASP
400
A
PRO
401
n
411
PRO
401
A
VAL
402
n
412
VAL
402
A
ALA
403
n
413
ALA
403
A
ALA
404
n
414
ALA
404
A
GLY
405
n
415
GLY
405
A
TRP
406
n
416
TRP
406
A
PRO
407
n
417
PRO
407
A
PRO
408
n
418
PRO
408
A
CYS
409
n
419
CYS
409
A
LEU
410
n
420
LEU
410
A
ARG
411
n
421
ARG
411
A
MET
412
n
422
MET
412
A
VAL
413
n
423
VAL
413
A
ALA
414
n
424
ALA
414
A
ALA
415
n
425
ALA
415
A
ILE
416
n
426
ILE
416
A
ALA
417
n
427
ALA
417
A
VAL
418
n
428
VAL
418
A
LEU
419
n
429
LEU
419
A
THR
420
n
430
THR
420
A
LYS
421
n
431
LYS
421
A
ASP
422
n
432
ASP
422
A
ALA
423
n
433
ALA
423
A
GLY
424
n
434
GLY
424
A
LYS
425
n
435
LYS
425
A
LEU
426
n
436
LEU
426
A
THR
427
n
437
THR
427
A
MET
428
n
438
MET
428
A
GLY
429
n
439
GLY
429
A
GLN
430
n
440
GLN
430
A
PRO
431
n
441
PRO
431
A
LEU
432
n
442
LEU
432
A
VAL
433
n
443
VAL
433
A
ILE
434
n
444
ILE
434
A
LEU
435
n
445
LEU
435
A
ALA
436
n
446
ALA
436
A
PRO
437
n
447
PRO
437
A
HIS
438
n
448
HIS
438
A
ALA
439
n
449
ALA
439
A
VAL
440
n
450
VAL
440
A
GLU
441
n
451
GLU
441
A
ALA
442
n
452
ALA
442
A
LEU
443
n
453
LEU
443
A
VAL
444
n
454
VAL
444
A
LYS
445
n
455
LYS
445
A
GLN
446
n
456
GLN
446
A
PRO
447
n
457
PRO
447
A
PRO
448
n
458
PRO
448
A
n
459
449
A
n
460
450
A
n
461
451
A
n
462
452
A
n
463
453
A
n
464
454
A
ALA
455
n
465
ALA
455
A
ARG
456
n
466
ARG
456
A
MET
457
n
467
MET
457
A
THR
458
n
468
THR
458
A
HIS
459
n
469
HIS
459
A
TYR
460
n
470
TYR
460
A
GLN
461
n
471
GLN
461
A
ALA
462
n
472
ALA
462
A
MET
463
n
473
MET
463
A
LEU
464
n
474
LEU
464
A
LEU
465
n
475
LEU
465
A
ASP
466
n
476
ASP
466
A
THR
467
n
477
THR
467
A
ASP
468
n
478
ASP
468
A
ARG
469
n
479
ARG
469
A
VAL
470
n
480
VAL
470
A
GLN
471
n
481
GLN
471
A
PHE
472
n
482
PHE
472
A
GLY
473
n
483
GLY
473
A
PRO
474
n
484
PRO
474
A
VAL
475
n
485
VAL
475
A
VAL
476
n
486
VAL
476
A
ALA
477
n
487
ALA
477
A
LEU
478
n
488
LEU
478
A
ASN
479
n
489
ASN
479
A
PRO
480
n
490
PRO
480
A
ALA
481
n
491
ALA
481
A
THR
482
n
492
THR
482
A
LEU
483
n
493
LEU
483
A
LEU
484
n
494
LEU
484
A
PRO
485
n
495
PRO
485
A
LEU
486
n
496
LEU
486
A
PRO
487
n
497
PRO
487
A
n
498
488
A
n
499
489
A
n
500
490
A
n
501
491
A
n
502
492
A
n
503
493
A
n
504
494
A
n
505
495
A
n
506
496
A
n
507
497
A
n
508
498
A
n
509
499
A
n
510
500
A
n
511
501
A
n
512
502
A
n
513
503
A
n
514
504
A
n
515
505
A
n
516
506
A
n
517
507
A
n
518
508
A
n
519
509
A
n
520
510
A
n
521
511
A
n
522
512
A
n
523
513
A
n
524
514
A
n
525
515
A
n
526
516
A
n
527
517
A
n
528
518
A
n
529
519
A
n
530
520
A
n
531
521
A
n
532
522
A
n
533
523
A
n
534
524
A
n
535
525
A
n
536
526
A
n
537
527
A
n
538
528
A
n
539
529
A
n
540
530
A
n
541
531
A
n
542
532
A
n
543
533
A
n
544
534
A
n
545
535
A
n
546
536
A
n
547
537
A
n
548
538
A
n
549
539
A
n
550
540
A
n
551
541
A
n
552
542
A
n
553
543
A
n
554
544
A
n
555
545
A
n
556
546
A
n
557
547
A
n
558
548
A
n
559
549
A
n
560
550
A
n
561
551
A
n
562
552
A
n
563
553
A
n
564
554
A
n
565
555
A
n
566
556
A
n
567
557
A
n
568
558
A
n
569
559
A
n
570
560
A
n
571
561
A
n
572
562
A
n
573
563
A
n
574
564
A
n
575
565
A
n
576
566
A
n
577
567
A
n
578
568
A
n
579
569
A
n
580
570
A
n
581
571
A
n
582
572
A
n
583
573
A
n
584
574
A
n
585
575
A
n
586
576
A
n
587
577
A
n
588
578
A
n
589
579
A
n
590
580
A
n
591
581
A
n
592
582
A
n
593
583
A
n
594
584
A
n
595
585
A
n
596
586
A
n
597
587
A
n
598
588
A
n
599
589
A
n
600
590
A
n
601
591
A
n
602
592
A
n
603
593
A
n
604
594
A
n
605
595
A
n
606
596
A
n
607
597
A
n
608
598
A
n
609
599
A
n
610
600
A
n
611
601
A
n
612
602
A
n
613
603
A
n
614
604
A
n
615
605
A
n
616
606
A
n
617
607
A
n
618
608
A
n
619
609
A
n
620
610
A
n
621
611
A
n
622
612
A
n
623
613
A
n
624
614
A
n
625
615
A
n
626
616
A
n
627
617
A
n
628
618
A
n
629
619
A
n
630
620
A
n
631
621
A
n
632
622
A
n
633
623
A
n
634
624
A
n
635
625
A
n
636
626
A
n
637
627
A
n
638
628
A
n
639
629
A
n
640
630
A
n
641
631
A
n
642
632
A
n
643
633
A
n
644
634
A
n
645
635
A
n
646
636
A
n
647
637
A
n
648
638
A
n
649
639
A
n
650
640
A
n
651
641
A
n
652
642
A
n
653
643
A
n
654
644
A
n
655
645
A
n
656
646
A
n
657
647
A
n
658
648
A
n
659
649
A
n
660
650
A
n
661
651
A
n
662
652
A
n
663
653
A
n
664
654
A
n
665
655
A
n
666
656
A
n
667
657
A
n
668
658
A
n
669
659
A
n
670
660
A
n
671
661
A
n
672
662
A
n
673
663
A
n
674
664
A
n
675
665
A
n
676
666
A
n
677
667
A
n
678
668
A
n
679
669
A
n
680
670
A
n
681
671
A
A
1
n
1
A
1
E
A
2
n
2
A
2
E
C
3
n
3
C
3
E
A
4
n
4
A
4
E
G
5
n
5
G
5
E
A
6
n
6
A
6
E
G
7
n
7
G
7
E
U
8
n
8
U
8
E
G
9
n
9
G
9
E
C
10
n
10
C
10
E
G
11
n
11
G
11
E
A
12
n
12
A
12
E
C
13
n
13
C
13
E
A
14
n
14
A
14
E
C
15
n
15
C
15
E
C
16
n
16
C
16
E
n
17
17
E
n
18
18
E
n
19
19
E
n
20
20
E
n
21
21
E
n
22
22
E
n
23
23
E
n
24
24
E
n
25
25
E
n
1
26
F
n
2
27
F
n
3
28
F
n
4
29
F
n
5
30
F
n
6
31
F
n
7
32
F
n
8
33
F
DG
34
n
9
DG
34
F
DG
35
n
10
DG
35
F
DT
36
n
11
DT
36
F
DG
37
n
12
DG
37
F
DT
38
n
13
DT
38
F
DC
39
n
14
DC
39
F
DG
40
n
15
DG
40
F
DC
41
n
16
DC
41
F
DA
42
n
17
DA
42
F
DC
43
n
18
DC
43
F
DT
44
n
19
DT
44
F
DC
45
n
20
DC
45
F
DT
46
n
21
DT
46
F
DG
47
n
22
DG
47
F
author_and_software_defined_assembly
PISA
3
trimeric
4670
-23
23710
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
88
A
N
VAL
98
A
O
THR
184
A
O
THR
194
A
O
LEU
183
A
O
LEU
193
A
N
PHE
170
A
N
PHE
180
A
N
TYR
222
A
N
TYR
232
A
O
ASP
225
A
O
ASP
235
A
O
ALA
230
A
O
ALA
240
A
N
TRP
145
A
N
TRP
155
A
N
TYR
146
A
N
TYR
156
A
O
GLN
263
A
O
GLN
273
A
N
VAL
266
A
N
VAL
276
A
O
LEU
273
A
O
LEU
283
A
N
LEU
272
A
N
LEU
282
A
O
TRP
279
A
O
TRP
289
A
N
ARG
278
A
N
ARG
288
A
O
LEU
357
A
O
LEU
367
A
O
VAL
392
A
O
VAL
402
A
N
LEU
381
A
N
LEU
391
A
O
THR
382
A
O
THR
392
A
N
GLU
367
A
N
GLU
377
A
N
LEU
368
A
N
LEU
378
A
O
LEU
435
A
O
LEU
445
A
N
ILE
434
A
N
ILE
444
A
O
GLN
471
A
O
GLN
481
A
N
ALA
477
A
N
ALA
487
A
O
LEU
486
A
O
LEU
496
1
A
CG
ASP
28
A
CG
ASP
38
1
Y
1
A
OD1
ASP
28
A
OD1
ASP
38
1
Y
1
A
OD2
ASP
28
A
OD2
ASP
38
1
Y
1
A
CG
LYS
62
A
CG
LYS
72
1
Y
1
A
CD
LYS
62
A
CD
LYS
72
1
Y
1
A
CE
LYS
62
A
CE
LYS
72
1
Y
1
A
NZ
LYS
62
A
NZ
LYS
72
1
Y
1
A
CG
GLN
68
A
CG
GLN
78
1
Y
1
A
CD
GLN
68
A
CD
GLN
78
1
Y
1
A
OE1
GLN
68
A
OE1
GLN
78
1
Y
1
A
NE2
GLN
68
A
NE2
GLN
78
1
Y
1
A
CG
ARG
71
A
CG
ARG
81
1
Y
1
A
CD
ARG
71
A
CD
ARG
81
1
Y
1
A
NE
ARG
71
A
NE
ARG
81
1
Y
1
A
CZ
ARG
71
A
CZ
ARG
81
1
Y
1
A
NH1
ARG
71
A
NH1
ARG
81
1
Y
1
A
NH2
ARG
71
A
NH2
ARG
81
1
Y
1
A
CG
LEU
72
A
CG
LEU
82
1
Y
1
A
CD1
LEU
72
A
CD1
LEU
82
1
Y
1
A
CD2
LEU
72
A
CD2
LEU
82
1
Y
1
A
CG
LYS
75
A
CG
LYS
85
1
Y
1
A
CD
LYS
75
A
CD
LYS
85
1
Y
1
A
CE
LYS
75
A
CE
LYS
85
1
Y
1
A
NZ
LYS
75
A
NZ
LYS
85
1
Y
1
A
CG1
ILE
78
A
CG1
ILE
88
1
Y
1
A
CG2
ILE
78
A
CG2
ILE
88
1
Y
1
A
CD1
ILE
78
A
CD1
ILE
88
1
Y
1
A
CG
GLN
79
A
CG
GLN
89
1
Y
1
A
CD
GLN
79
A
CD
GLN
89
1
Y
1
A
OE1
GLN
79
A
OE1
GLN
89
1
Y
1
A
NE2
GLN
79
A
NE2
GLN
89
1
Y
1
A
CG
LYS
102
A
CG
LYS
112
1
Y
1
A
CD
LYS
102
A
CD
LYS
112
1
Y
1
A
CE
LYS
102
A
CE
LYS
112
1
Y
1
A
NZ
LYS
102
A
NZ
LYS
112
1
Y
1
A
CG
LYS
103
A
CG
LYS
113
1
Y
1
A
CD
LYS
103
A
CD
LYS
113
1
Y
1
A
CE
LYS
103
A
CE
LYS
113
1
Y
1
A
NZ
LYS
103
A
NZ
LYS
113
1
Y
1
A
CG
TYR
109
A
CG
TYR
119
1
Y
1
A
CD1
TYR
109
A
CD1
TYR
119
1
Y
1
A
CD2
TYR
109
A
CD2
TYR
119
1
Y
1
A
CE1
TYR
109
A
CE1
TYR
119
1
Y
1
A
CE2
TYR
109
A
CE2
TYR
119
1
Y
1
A
CZ
TYR
109
A
CZ
TYR
119
1
Y
1
A
OH
TYR
109
A
OH
TYR
119
1
Y
1
A
CG
HIS
126
A
CG
HIS
136
1
Y
1
A
ND1
HIS
126
A
ND1
HIS
136
1
Y
1
A
CD2
HIS
126
A
CD2
HIS
136
1
Y
1
A
CE1
HIS
126
A
CE1
HIS
136
1
Y
1
A
NE2
HIS
126
A
NE2
HIS
136
1
Y
1
A
CG
ARG
173
A
CG
ARG
183
1
Y
1
A
CD
ARG
173
A
CD
ARG
183
1
Y
1
A
NE
ARG
173
A
NE
ARG
183
1
Y
1
A
CZ
ARG
173
A
CZ
ARG
183
1
Y
1
A
NH1
ARG
173
A
NH1
ARG
183
1
Y
1
A
NH2
ARG
173
A
NH2
ARG
183
1
Y
1
A
CG
ASP
174
A
CG
ASP
184
1
Y
1
A
OD1
ASP
174
A
OD1
ASP
184
1
Y
1
A
OD2
ASP
174
A
OD2
ASP
184
1
Y
1
A
CG
LYS
257
A
CG
LYS
267
1
Y
1
A
CD
LYS
257
A
CD
LYS
267
1
Y
1
A
CE
LYS
257
A
CE
LYS
267
1
Y
1
A
NZ
LYS
257
A
NZ
LYS
267
1
Y
1
A
CG
LYS
264
A
CG
LYS
274
1
Y
1
A
CD
LYS
264
A
CD
LYS
274
1
Y
1
A
CE
LYS
264
A
CE
LYS
274
1
Y
1
A
NZ
LYS
264
A
NZ
LYS
274
1
Y
1
A
CE
LYS
267
A
CE
LYS
277
1
Y
1
A
NZ
LYS
267
A
NZ
LYS
277
1
Y
1
A
CG
GLU
286
A
CG
GLU
296
1
Y
1
A
CD
GLU
286
A
CD
GLU
296
1
Y
1
A
OE1
GLU
286
A
OE1
GLU
296
1
Y
1
A
OE2
GLU
286
A
OE2
GLU
296
1
Y
1
A
CG
LYS
329
A
CG
LYS
339
1
Y
1
A
CD
LYS
329
A
CD
LYS
339
1
Y
1
A
CE
LYS
329
A
CE
LYS
339
1
Y
1
A
NZ
LYS
329
A
NZ
LYS
339
1
Y
1
A
OG1
THR
332
A
OG1
THR
342
1
Y
1
A
CG2
THR
332
A
CG2
THR
342
1
Y
1
A
CG
LEU
333
A
CG
LEU
343
1
Y
1
A
CD1
LEU
333
A
CD1
LEU
343
1
Y
1
A
CD2
LEU
333
A
CD2
LEU
343
1
Y
1
A
CG
ASP
468
A
CG
ASP
478
1
Y
1
A
OD1
ASP
468
A
OD1
ASP
478
1
Y
1
A
OD2
ASP
468
A
OD2
ASP
478
1
Y
1
F
P
DG
34
C
P
DG
9
1
Y
1
F
OP1
DG
34
C
OP1
DG
9
1
Y
1
F
OP2
DG
34
C
OP2
DG
9
1
Y
1
F
C7
DT
36
C
C7
DT
11
1
Y
1
F
C7
DT
38
C
C7
DT
13
1
Y
1
F
C7
DT
44
C
C7
DT
19
1
Y
1
F
C7
DT
46
C
C7
DT
21
1
Y
1
A
MET
-9
A
MET
1
1
Y
1
A
SER
-8
A
SER
2
1
Y
1
A
HIS
-7
A
HIS
3
1
Y
1
A
HIS
-6
A
HIS
4
1
Y
1
A
HIS
-5
A
HIS
5
1
Y
1
A
HIS
-4
A
HIS
6
1
Y
1
A
HIS
-3
A
HIS
7
1
Y
1
A
HIS
-2
A
HIS
8
1
Y
1
A
SER
-1
A
SER
9
1
Y
1
A
ALA
0
A
ALA
10
1
Y
1
A
THR
1
A
THR
11
1
Y
1
A
LEU
2
A
LEU
12
1
Y
1
A
ASN
3
A
ASN
13
1
Y
1
A
ILE
4
A
ILE
14
1
Y
1
A
GLU
5
A
GLU
15
1
Y
1
A
ASP
6
A
ASP
16
1
Y
1
A
GLU
7
A
GLU
17
1
Y
1
A
TYR
8
A
TYR
18
1
Y
1
A
ARG
9
A
ARG
19
1
Y
1
A
LEU
10
A
LEU
20
1
Y
1
A
HIS
11
A
HIS
21
1
Y
1
A
GLU
12
A
GLU
22
1
Y
1
A
THR
13
A
THR
23
1
Y
1
A
SER
14
A
SER
24
1
Y
1
A
LYS
15
A
LYS
25
1
Y
1
A
GLU
16
A
GLU
26
1
Y
1
A
PRO
17
A
PRO
27
1
Y
1
A
ASP
18
A
ASP
28
1
Y
1
A
VAL
19
A
VAL
29
1
Y
1
A
PRO
20
A
PRO
30
1
Y
1
A
LEU
21
A
LEU
31
1
Y
1
A
GLY
22
A
GLY
32
1
Y
1
A
SER
23
A
SER
33
1
Y
1
A
THR
24
A
THR
34
1
Y
1
A
TRP
25
A
TRP
35
1
Y
1
A
LEU
26
A
LEU
36
1
Y
1
A
SER
27
A
SER
37
1
Y
1
A
PRO
104
A
PRO
114
1
Y
1
A
GLY
105
A
GLY
115
1
Y
1
A
THR
106
A
THR
116
1
Y
1
A
ASN
107
A
ASN
117
1
Y
1
A
PRO
175
A
PRO
185
1
Y
1
A
GLU
176
A
GLU
186
1
Y
1
A
MET
177
A
MET
187
1
Y
1
A
GLY
178
A
GLY
188
1
Y
1
A
ILE
179
A
ILE
189
1
Y
1
A
SER
180
A
SER
190
1
Y
1
A
GLY
181
A
GLY
191
1
Y
1
A
THR
330
A
THR
340
1
Y
1
A
GLY
331
A
GLY
341
1
Y
1
A
ASP
449
A
ASP
459
1
Y
1
A
ARG
450
A
ARG
460
1
Y
1
A
TRP
451
A
TRP
461
1
Y
1
A
LEU
452
A
LEU
462
1
Y
1
A
SER
453
A
SER
463
1
Y
1
A
ASN
454
A
ASN
464
1
Y
1
A
GLU
488
A
GLU
498
1
Y
1
A
LYS
489
A
LYS
499
1
Y
1
A
GLU
490
A
GLU
500
1
Y
1
A
ALA
491
A
ALA
501
1
Y
1
A
PRO
492
A
PRO
502
1
Y
1
A
HIS
493
A
HIS
503
1
Y
1
A
ASP
494
A
ASP
504
1
Y
1
A
CYS
495
A
CYS
505
1
Y
1
A
LEU
496
A
LEU
506
1
Y
1
A
GLU
497
A
GLU
507
1
Y
1
A
ILE
498
A
ILE
508
1
Y
1
A
LEU
499
A
LEU
509
1
Y
1
A
ALA
500
A
ALA
510
1
Y
1
A
GLU
501
A
GLU
511
1
Y
1
A
THR
502
A
THR
512
1
Y
1
A
HIS
503
A
HIS
513
1
Y
1
A
GLY
504
A
GLY
514
1
Y
1
A
THR
505
A
THR
515
1
Y
1
A
ARG
506
A
ARG
516
1
Y
1
A
PRO
507
A
PRO
517
1
Y
1
A
ASP
508
A
ASP
518
1
Y
1
A
LEU
509
A
LEU
519
1
Y
1
A
THR
510
A
THR
520
1
Y
1
A
ASP
511
A
ASP
521
1
Y
1
A
GLN
512
A
GLN
522
1
Y
1
A
PRO
513
A
PRO
523
1
Y
1
A
ILE
514
A
ILE
524
1
Y
1
A
PRO
515
A
PRO
525
1
Y
1
A
ASP
516
A
ASP
526
1
Y
1
A
ALA
517
A
ALA
527
1
Y
1
A
ASP
518
A
ASP
528
1
Y
1
A
TYR
519
A
TYR
529
1
Y
1
A
THR
520
A
THR
530
1
Y
1
A
TRP
521
A
TRP
531
1
Y
1
A
TYR
522
A
TYR
532
1
Y
1
A
THR
523
A
THR
533
1
Y
1
A
ASP
524
A
ASP
534
1
Y
1
A
GLY
525
A
GLY
535
1
Y
1
A
SER
526
A
SER
536
1
Y
1
A
SER
527
A
SER
537
1
Y
1
A
PHE
528
A
PHE
538
1
Y
1
A
LEU
529
A
LEU
539
1
Y
1
A
GLN
530
A
GLN
540
1
Y
1
A
GLU
531
A
GLU
541
1
Y
1
A
GLY
532
A
GLY
542
1
Y
1
A
GLN
533
A
GLN
543
1
Y
1
A
ARG
534
A
ARG
544
1
Y
1
A
ARG
535
A
ARG
545
1
Y
1
A
ALA
536
A
ALA
546
1
Y
1
A
GLY
537
A
GLY
547
1
Y
1
A
ALA
538
A
ALA
548
1
Y
1
A
ALA
539
A
ALA
549
1
Y
1
A
VAL
540
A
VAL
550
1
Y
1
A
THR
541
A
THR
551
1
Y
1
A
THR
542
A
THR
552
1
Y
1
A
GLU
543
A
GLU
553
1
Y
1
A
THR
544
A
THR
554
1
Y
1
A
GLU
545
A
GLU
555
1
Y
1
A
VAL
546
A
VAL
556
1
Y
1
A
ILE
547
A
ILE
557
1
Y
1
A
TRP
548
A
TRP
558
1
Y
1
A
ALA
549
A
ALA
559
1
Y
1
A
ARG
550
A
ARG
560
1
Y
1
A
ALA
551
A
ALA
561
1
Y
1
A
LEU
552
A
LEU
562
1
Y
1
A
PRO
553
A
PRO
563
1
Y
1
A
ALA
554
A
ALA
564
1
Y
1
A
GLY
555
A
GLY
565
1
Y
1
A
THR
556
A
THR
566
1
Y
1
A
SER
557
A
SER
567
1
Y
1
A
ALA
558
A
ALA
568
1
Y
1
A
GLN
559
A
GLN
569
1
Y
1
A
ARG
560
A
ARG
570
1
Y
1
A
ALA
561
A
ALA
571
1
Y
1
A
GLU
562
A
GLU
572
1
Y
1
A
LEU
563
A
LEU
573
1
Y
1
A
ILE
564
A
ILE
574
1
Y
1
A
ALA
565
A
ALA
575
1
Y
1
A
LEU
566
A
LEU
576
1
Y
1
A
THR
567
A
THR
577
1
Y
1
A
GLN
568
A
GLN
578
1
Y
1
A
ALA
569
A
ALA
579
1
Y
1
A
LEU
570
A
LEU
580
1
Y
1
A
LYS
571
A
LYS
581
1
Y
1
A
MET
572
A
MET
582
1
Y
1
A
ALA
573
A
ALA
583
1
Y
1
A
GLU
574
A
GLU
584
1
Y
1
A
GLY
575
A
GLY
585
1
Y
1
A
LYS
576
A
LYS
586
1
Y
1
A
LYS
577
A
LYS
587
1
Y
1
A
LEU
578
A
LEU
588
1
Y
1
A
ASN
579
A
ASN
589
1
Y
1
A
VAL
580
A
VAL
590
1
Y
1
A
TYR
581
A
TYR
591
1
Y
1
A
THR
582
A
THR
592
1
Y
1
A
ASN
583
A
ASN
593
1
Y
1
A
SER
584
A
SER
594
1
Y
1
A
ARG
585
A
ARG
595
1
Y
1
A
TYR
586
A
TYR
596
1
Y
1
A
ALA
587
A
ALA
597
1
Y
1
A
PHE
588
A
PHE
598
1
Y
1
A
ALA
589
A
ALA
599
1
Y
1
A
THR
590
A
THR
600
1
Y
1
A
ALA
591
A
ALA
601
1
Y
1
A
HIS
592
A
HIS
602
1
Y
1
A
VAL
593
A
VAL
603
1
Y
1
A
HIS
594
A
HIS
604
1
Y
1
A
GLY
595
A
GLY
605
1
Y
1
A
GLU
596
A
GLU
606
1
Y
1
A
ILE
597
A
ILE
607
1
Y
1
A
TYR
598
A
TYR
608
1
Y
1
A
ARG
599
A
ARG
609
1
Y
1
A
ARG
600
A
ARG
610
1
Y
1
A
ARG
601
A
ARG
611
1
Y
1
A
GLY
602
A
GLY
612
1
Y
1
A
LEU
603
A
LEU
613
1
Y
1
A
LEU
604
A
LEU
614
1
Y
1
A
THR
605
A
THR
615
1
Y
1
A
SER
606
A
SER
616
1
Y
1
A
GLU
607
A
GLU
617
1
Y
1
A
GLY
608
A
GLY
618
1
Y
1
A
ARG
609
A
ARG
619
1
Y
1
A
GLU
610
A
GLU
620
1
Y
1
A
ILE
611
A
ILE
621
1
Y
1
A
LYS
612
A
LYS
622
1
Y
1
A
ASN
613
A
ASN
623
1
Y
1
A
LYS
614
A
LYS
624
1
Y
1
A
ASN
615
A
ASN
625
1
Y
1
A
GLU
616
A
GLU
626
1
Y
1
A
ILE
617
A
ILE
627
1
Y
1
A
LEU
618
A
LEU
628
1
Y
1
A
ALA
619
A
ALA
629
1
Y
1
A
LEU
620
A
LEU
630
1
Y
1
A
LEU
621
A
LEU
631
1
Y
1
A
LYS
622
A
LYS
632
1
Y
1
A
ALA
623
A
ALA
633
1
Y
1
A
LEU
624
A
LEU
634
1
Y
1
A
PHE
625
A
PHE
635
1
Y
1
A
LEU
626
A
LEU
636
1
Y
1
A
PRO
627
A
PRO
637
1
Y
1
A
LYS
628
A
LYS
638
1
Y
1
A
ARG
629
A
ARG
639
1
Y
1
A
LEU
630
A
LEU
640
1
Y
1
A
SER
631
A
SER
641
1
Y
1
A
ILE
632
A
ILE
642
1
Y
1
A
ILE
633
A
ILE
643
1
Y
1
A
HIS
634
A
HIS
644
1
Y
1
A
CYS
635
A
CYS
645
1
Y
1
A
PRO
636
A
PRO
646
1
Y
1
A
GLY
637
A
GLY
647
1
Y
1
A
HIS
638
A
HIS
648
1
Y
1
A
GLN
639
A
GLN
649
1
Y
1
A
LYS
640
A
LYS
650
1
Y
1
A
GLY
641
A
GLY
651
1
Y
1
A
ASN
642
A
ASN
652
1
Y
1
A
SER
643
A
SER
653
1
Y
1
A
ALA
644
A
ALA
654
1
Y
1
A
GLU
645
A
GLU
655
1
Y
1
A
ALA
646
A
ALA
656
1
Y
1
A
ARG
647
A
ARG
657
1
Y
1
A
GLY
648
A
GLY
658
1
Y
1
A
ASN
649
A
ASN
659
1
Y
1
A
ARG
650
A
ARG
660
1
Y
1
A
MET
651
A
MET
661
1
Y
1
A
ALA
652
A
ALA
662
1
Y
1
A
ASP
653
A
ASP
663
1
Y
1
A
GLN
654
A
GLN
664
1
Y
1
A
ALA
655
A
ALA
665
1
Y
1
A
ALA
656
A
ALA
666
1
Y
1
A
ARG
657
A
ARG
667
1
Y
1
A
GLU
658
A
GLU
668
1
Y
1
A
ALA
659
A
ALA
669
1
Y
1
A
ALA
660
A
ALA
670
1
Y
1
A
MET
661
A
MET
671
1
Y
1
A
LYS
662
A
LYS
672
1
Y
1
A
ALA
663
A
ALA
673
1
Y
1
A
VAL
664
A
VAL
674
1
Y
1
A
LEU
665
A
LEU
675
1
Y
1
A
GLU
666
A
GLU
676
1
Y
1
A
THR
667
A
THR
677
1
Y
1
A
SER
668
A
SER
678
1
Y
1
A
THR
669
A
THR
679
1
Y
1
A
LEU
670
A
LEU
680
1
Y
1
A
LEU
671
A
LEU
681
1
Y
1
E
U
17
B
U
17
1
Y
1
E
G
18
B
G
18
1
Y
1
E
A
19
B
A
19
1
Y
1
E
U
20
B
U
20
1
Y
1
E
U
21
B
U
21
1
Y
1
E
C
22
B
C
22
1
Y
1
E
C
23
B
C
23
1
Y
1
E
A
24
B
A
24
1
Y
1
E
U
25
B
U
25
1
Y
1
F
DT
26
C
DT
1
1
Y
1
F
DG
27
C
DG
2
1
Y
1
F
DG
28
C
DG
3
1
Y
1
F
DA
29
C
DA
4
1
Y
1
F
DA
30
C
DA
5
1
Y
1
F
DT
31
C
DT
6
1
Y
1
F
DC
32
C
DC
7
1
Y
1
F
DA
33
C
DA
8
1
Y
1
2.61
0.30
108.30
110.91
F
F
F
O4'
C1'
N9
DG
DG
DG
40
40
40
N
1
2.84
0.30
108.30
111.14
F
F
F
O4'
C1'
N1
DC
DC
DC
41
41
41
N
1
2.52
0.30
108.30
110.82
F
F
F
O4'
C1'
N9
DA
DA
DA
42
42
42
N
1
1.97
0.30
108.30
110.27
F
F
F
O4'
C1'
N1
DC
DC
DC
43
43
43
N
1
2.89
0.30
108.30
111.19
F
F
F
O4'
C1'
N1
DT
DT
DT
44
44
44
N
1
2.53
0.30
108.30
110.83
F
F
F
O4'
C1'
N9
DG
DG
DG
47
47
47
N
1
A
THR
36
-107.99
-69.62
1
A
PRO
47
-32.99
136.01
1
A
ALA
54
-59.00
-5.56
1
A
GLN
63
-48.19
106.89
1
A
MET
66
-115.20
-83.55
1
A
SER
67
163.16
170.30
1
A
LEU
99
-116.54
78.96
1
A
PRO
111
-75.80
39.69
1
A
ASN
119
-68.20
2.91
1
A
PHE
168
-107.24
60.99
1
A
ASP
209
-69.31
-70.46
1
A
PHE
210
-29.35
-60.13
1
A
VAL
223
53.29
-84.09
1
A
ALA
230
-102.45
-161.98
1
A
CYS
262
34.73
64.34
1
A
VAL
288
-122.58
-54.84
1
A
LEU
327
-77.68
24.99
1
A
LEU
333
-51.23
170.54
1
A
ALA
393
-177.20
147.91
1
A
VAL
440
-146.71
-7.33
1
A
THR
482
58.31
-32.05
198.250
78.1723
29.510
7.3011
0.0000
-0.0000
7.3011
-0.0000
-14.6021
0.2798
0.2242
0.227
0.2270
3.040
29.661
981
19791
19172
5.12
97.37
1.000
1.000
0.7658
0.39
Random
1,2
2.0
MOLECULAR REPLACEMENT
28.8400
0.72
1.00
1RW3
ML
FLAT BULK SOLVENT MODEL
66.648
0.327
3.040
29.661
37
4071
0
621
3413
0.011
4238
1.011
5867
16.257
1616
0.060
677
0.005
649
0.4231
0.3316
3.2001
133
2351
7
91.00
0.3829
0.2747
3.4003
149
2496
7
95.00
0.3017
0.2464
3.6625
130
2554
7
98.00
0.2969
0.2178
4.0302
155
2586
7
99.00
0.2454
0.1762
4.6115
142
2646
7
100.00
0.2032
0.1920
5.8029
132
2704
7
100.00
0.2768
0.2380
29.6627
140
2854
7
100.00
71.4
3.04
50.0
4HKQ
19791
19791
2.0
2.0
1,2
13.0
100
3.04
3.09
1,2
100
data collection
MxCuBE
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.7_650)
data reduction
HKL-2000
data scaling
SCALEPACK
XMRV reverse transcriptase in complex with RNA/DNA hybrid
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
A
PHE
29
A
PHE
39
HELX_P
A
ALA
32
A
ALA
42
5
1
4
A
TRP
33
A
TRP
43
HELX_P
A
GLY
38
A
GLY
48
1
2
6
A
SER
67
A
SER
77
HELX_P
A
ILE
74
A
ILE
84
1
3
8
A
ILE
74
A
ILE
84
HELX_P
A
ASP
83
A
ASP
93
1
4
10
A
GLU
117
A
GLU
127
HELX_P
A
VAL
122
A
VAL
132
1
5
6
A
ASN
134
A
ASN
144
HELX_P
A
LEU
139
A
LEU
149
5
6
6
A
ALA
154
A
ALA
164
HELX_P
A
LEU
158
A
LEU
168
5
7
5
A
SER
164
A
SER
174
HELX_P
A
LEU
167
A
LEU
177
5
8
4
A
ASN
194
A
ASN
204
HELX_P
A
HIS
214
A
HIS
224
1
9
21
A
SER
232
A
SER
242
HELX_P
A
GLY
251
A
GLY
261
1
10
20
A
THR
281
A
THR
291
HELX_P
A
GLY
290
A
GLY
300
1
11
10
A
THR
296
A
THR
306
HELX_P
A
GLY
308
A
GLY
318
1
12
13
A
PHE
309
A
PHE
319
HELX_P
A
ILE
314
A
ILE
324
5
13
6
A
GLY
316
A
GLY
326
HELX_P
A
ALA
321
A
ALA
331
1
14
6
A
LEU
324
A
LEU
334
HELX_P
A
THR
328
A
THR
338
5
15
5
A
GLY
337
A
GLY
347
HELX_P
A
THR
353
A
THR
363
1
16
17
A
ASP
400
A
ASP
410
HELX_P
A
TRP
406
A
TRP
416
1
17
7
A
PRO
407
A
PRO
417
HELX_P
A
MET
428
A
MET
438
1
18
22
A
VAL
440
A
VAL
450
HELX_P
A
GLN
446
A
GLN
456
1
19
7
A
ARG
456
A
ARG
466
HELX_P
A
LEU
465
A
LEU
475
1
20
10
hydrog
WATSON-CRICK
E
C
3
B
N3
C
3
1_555
F
DG
47
C
N1
DG
22
1_555
hydrog
WATSON-CRICK
E
C
3
B
N4
C
3
1_555
F
DG
47
C
O6
DG
22
1_555
hydrog
WATSON-CRICK
E
C
3
B
O2
C
3
1_555
F
DG
47
C
N2
DG
22
1_555
hydrog
WATSON-CRICK
E
A
4
B
N1
A
4
1_555
F
DT
46
C
N3
DT
21
1_555
hydrog
WATSON-CRICK
E
A
4
B
N6
A
4
1_555
F
DT
46
C
O4
DT
21
1_555
hydrog
WATSON-CRICK
E
G
5
B
N1
G
5
1_555
F
DC
45
C
N3
DC
20
1_555
hydrog
WATSON-CRICK
E
G
5
B
N2
G
5
1_555
F
DC
45
C
O2
DC
20
1_555
hydrog
WATSON-CRICK
E
G
5
B
O6
G
5
1_555
F
DC
45
C
N4
DC
20
1_555
hydrog
WATSON-CRICK
E
A
6
B
N1
A
6
1_555
F
DT
44
C
N3
DT
19
1_555
hydrog
WATSON-CRICK
E
A
6
B
N6
A
6
1_555
F
DT
44
C
O4
DT
19
1_555
hydrog
WATSON-CRICK
E
G
7
B
N1
G
7
1_555
F
DC
43
C
N3
DC
18
1_555
hydrog
WATSON-CRICK
E
G
7
B
N2
G
7
1_555
F
DC
43
C
O2
DC
18
1_555
hydrog
WATSON-CRICK
E
G
7
B
O6
G
7
1_555
F
DC
43
C
N4
DC
18
1_555
hydrog
WATSON-CRICK
E
U
8
B
N3
U
8
1_555
F
DA
42
C
N1
DA
17
1_555
hydrog
WATSON-CRICK
E
U
8
B
O4
U
8
1_555
F
DA
42
C
N6
DA
17
1_555
hydrog
WATSON-CRICK
E
G
9
B
N1
G
9
1_555
F
DC
41
C
N3
DC
16
1_555
hydrog
WATSON-CRICK
E
G
9
B
N2
G
9
1_555
F
DC
41
C
O2
DC
16
1_555
hydrog
WATSON-CRICK
E
G
9
B
O6
G
9
1_555
F
DC
41
C
N4
DC
16
1_555
hydrog
WATSON-CRICK
E
C
10
B
N3
C
10
1_555
F
DG
40
C
N1
DG
15
1_555
hydrog
WATSON-CRICK
E
C
10
B
N4
C
10
1_555
F
DG
40
C
O6
DG
15
1_555
hydrog
WATSON-CRICK
E
C
10
B
O2
C
10
1_555
F
DG
40
C
N2
DG
15
1_555
hydrog
WATSON-CRICK
E
G
11
B
N1
G
11
1_555
F
DC
39
C
N3
DC
14
1_555
hydrog
WATSON-CRICK
E
G
11
B
N2
G
11
1_555
F
DC
39
C
O2
DC
14
1_555
hydrog
WATSON-CRICK
E
G
11
B
O6
G
11
1_555
F
DC
39
C
N4
DC
14
1_555
hydrog
A-DG MISPAIR
E
A
12
B
N6
A
12
1_555
F
DG
37
C
O6
DG
12
1_555
hydrog
WATSON-CRICK
E
A
12
B
N1
A
12
1_555
F
DT
38
C
N3
DT
13
1_555
hydrog
WATSON-CRICK
E
A
12
B
N6
A
12
1_555
F
DT
38
C
O4
DT
13
1_555
hydrog
WATSON-CRICK
E
C
13
B
N3
C
13
1_555
F
DG
37
C
N1
DG
12
1_555
hydrog
WATSON-CRICK
E
C
13
B
N4
C
13
1_555
F
DG
37
C
O6
DG
12
1_555
hydrog
WATSON-CRICK
E
C
13
B
O2
C
13
1_555
F
DG
37
C
N2
DG
12
1_555
hydrog
WATSON-CRICK
E
A
14
B
N1
A
14
1_555
F
DT
36
C
N3
DT
11
1_555
hydrog
WATSON-CRICK
E
A
14
B
N6
A
14
1_555
F
DT
36
C
O4
DT
11
1_555
hydrog
WATSON-CRICK
E
C
15
B
N3
C
15
1_555
F
DG
35
C
N1
DG
10
1_555
hydrog
WATSON-CRICK
E
C
15
B
N4
C
15
1_555
F
DG
35
C
O6
DG
10
1_555
hydrog
WATSON-CRICK
E
C
15
B
O2
C
15
1_555
F
DG
35
C
N2
DG
10
1_555
hydrog
WATSON-CRICK
E
C
16
B
N3
C
16
1_555
F
DG
34
C
N1
DG
9
1_555
hydrog
WATSON-CRICK
E
C
16
B
N4
C
16
1_555
F
DG
34
C
O6
DG
9
1_555
hydrog
WATSON-CRICK
E
C
16
B
O2
C
16
1_555
F
DG
34
C
N2
DG
9
1_555
TRANSCRIPTION/RNA/DNA
Protein-DNA-RNA complex, reverse transcription, TRANSCRIPTION-RNA-DNA complex
POL_XMRV6
UNP
1
658
A1Z651
TLNIEDEYRLHETSKEPDVPLGSTWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQR
LLDQGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRL
HPTSQPLFAFEWRDPEMGISGQLTWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSEQDCQRGT
RALLQTLGNLGYRASAKKAQICQKQVKYLGYLLKEGQRWLTEARKETVMGQPTPKTPRQLREFLGTAGFCRLWIPGFAEM
AAPLYPLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVDEKQGYAKGVLTQKLGPWRRPVAYLSKKLD
PVAAGWPPCLRMVAAIAVLTKDAGKLTMGQPLVILAPHAVEALVKQPPDRWLSNARMTHYQAMLLDTDRVQFGPVVALNP
ATLLPLPEKEAPHDCLEILAETHGTRPDLTDQPIPDADYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQR
AELIALTQALKMAEGKKLNVYTDSRYAFATAHVHGEIYRRRGLLTSEGREIKNKNEILALLKALFLPKRLSIIHCPGHQK
GNSAEARGNRMADQAAREAAMKAVLETSTLL
4HKQ
PDB
2
4HKQ
4HKQ
PDB
3
4HKQ
658
1328
4HKQ
1
671
A1Z651
A
1
11
681
1
25
4HKQ
1
25
4HKQ
E
2
1
25
26
47
4HKQ
26
47
4HKQ
F
3
1
22
1
expression tag
MET
-9
4HKQ
A
A1Z651
UNP
1
1
expression tag
SER
-8
4HKQ
A
A1Z651
UNP
2
1
expression tag
HIS
-7
4HKQ
A
A1Z651
UNP
3
1
expression tag
HIS
-6
4HKQ
A
A1Z651
UNP
4
1
expression tag
HIS
-5
4HKQ
A
A1Z651
UNP
5
1
expression tag
HIS
-4
4HKQ
A
A1Z651
UNP
6
1
expression tag
HIS
-3
4HKQ
A
A1Z651
UNP
7
1
expression tag
HIS
-2
4HKQ
A
A1Z651
UNP
8
1
expression tag
SER
-1
4HKQ
A
A1Z651
UNP
9
1
expression tag
ALA
0
4HKQ
A
A1Z651
UNP
10
1
ASP
engineered mutation
ASN
583
4HKQ
A
A1Z651
UNP
1240
593
3
4
4
5
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
A
LEU
87
A
LEU
97
A
PRO
89
A
PRO
99
A
LEU
183
A
LEU
193
A
TRP
185
A
TRP
195
A
ALA
169
A
ALA
179
A
PHE
170
A
PHE
180
A
ILE
218
A
ILE
228
A
TYR
222
A
TYR
232
A
ASP
225
A
ASP
235
A
ALA
230
A
ALA
240
A
TRP
145
A
TRP
155
A
ASP
150
A
ASP
160
A
GLN
260
A
GLN
270
A
GLN
263
A
GLN
273
A
GLN
265
A
GLN
275
A
TYR
268
A
TYR
278
A
TYR
271
A
TYR
281
A
LYS
274
A
LYS
284
A
GLN
277
A
GLN
287
A
LEU
280
A
LEU
290
A
LEU
357
A
LEU
367
A
GLY
358
A
GLY
368
A
TRP
388
A
TRP
398
A
LYS
398
A
LYS
408
A
TYR
376
A
TYR
386
A
LEU
385
A
LEU
395
A
PHE
366
A
PHE
376
A
LYS
373
A
LYS
383
A
LEU
432
A
LEU
442
A
ALA
436
A
ALA
446
A
VAL
470
A
VAL
480
A
VAL
475
A
VAL
485
A
ALA
477
A
ALA
487
A
LEU
478
A
LEU
488
A
PRO
485
A
PRO
495
A
LEU
486
A
LEU
496
96
P 43 21 2