0.021935
0.000000
0.000000
0.000000
0.011041
0.000000
0.000000
0.000000
0.007280
0.00000
0.00000
0.00000
Uchtenhagen, H.
Boulanger, B.
Hein, Z.
Abualrous, E.T.
Zacharias, M.
Werner, J.
Elliott, T.
Springer, S.
Achour, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
45.590
90.570
137.370
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
S
C
N
256
N
O
N
257
N
C
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
P
N
296
N
O
N
297
N
O
N
298
N
O
N
299
N
O
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
O
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
R
C
N
336
N
O
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
N
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
N
404
N
C
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
sing
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
doub
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
UK
J.Cell.Sci.
0021-9533
127
2885
2897
10.1242/jcs.145334
24806963
Peptide-independent stabilization of MHC class I molecules breaches cellular quality control.
2014
10.2210/pdb4hs3/pdb
pdb_00004hs3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-08-26
MARMOSAIC 225 mm CCD
Silicon 111
SINGLE WAVELENGTH
M
x-ray
1
0.873
1.0
ID23-2
ESRF
0.873
SYNCHROTRON
ESRF BEAMLINE ID23-2
31846.582
H-2 class I histocompatibility antigen, K-B alpha chain
UNP residues 22-297
A139C, Y84C
1
man
polymer
11704.359
Beta-2-microglobulin
UNP residues 21-119
1
man
polymer
916.052
Envelope glycoprotein
UNP residues 34-40
1
syn
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
1
syn
non-polymer
18.015
water
418
nat
water
H-2K(B)
no
no
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGCYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMCALITKHKWEQAGEAERLRAYL
EGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT
FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRWEP
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGCYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMCALITKHKWEQAGEAERLRAYL
EGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT
FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRWEP
A
polypeptide(L)
no
no
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHDSMAEPKTVYWDRDM
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHDSMAEPKTVYWDRDM
B
polypeptide(L)
no
no
AVYNFATM
AVYNFATM
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse
sample
H2-K1, H2-K
10090
Mus musculus
469008
Escherichia coli
Bl21(DE3)pLysS
pGMT7
mouse
sample
B2m
10090
Mus musculus
469008
Escherichia coli
Bl21(DE3)pLysS
pGMT7
1
3.19
61.43
VAPOR DIFFUSION, HANGING DROP
6.5
Crystallization assays were performed in 24 well plates at 25 C using the vapor diffusion, hanging drop method. Best-diffracting crystals obtained from 7 mg/ml protein concentration in 2 M NaK phosphate pH 6.5 with 3% MPD, temperature 298K, VAPOR DIFFUSION, HANGING DROP
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2014-05-07
1
1
2014-05-21
1
2
2014-07-16
1
3
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-10-29
REL
REL
PO4
PHOSPHATE ION
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
HOH
water
synthetic peptide
11623
Lymphocytic choriomeningitis virus
sample
1S7S
PDB
experimental model
PO4
100
4
PO4
PO4
301
A
MPD
5276
5
MPD
MPD
101
B
HOH
1
6
HOH
HOH
401
A
HOH
2
6
HOH
HOH
402
A
HOH
3
6
HOH
HOH
403
A
HOH
5
6
HOH
HOH
404
A
HOH
7
6
HOH
HOH
405
A
HOH
8
6
HOH
HOH
406
A
HOH
12
6
HOH
HOH
407
A
HOH
13
6
HOH
HOH
408
A
HOH
14
6
HOH
HOH
409
A
HOH
15
6
HOH
HOH
410
A
HOH
16
6
HOH
HOH
411
A
HOH
17
6
HOH
HOH
412
A
HOH
18
6
HOH
HOH
413
A
HOH
20
6
HOH
HOH
414
A
HOH
21
6
HOH
HOH
415
A
HOH
23
6
HOH
HOH
416
A
HOH
24
6
HOH
HOH
417
A
HOH
26
6
HOH
HOH
418
A
HOH
27
6
HOH
HOH
419
A
HOH
28
6
HOH
HOH
420
A
HOH
30
6
HOH
HOH
421
A
HOH
31
6
HOH
HOH
422
A
HOH
33
6
HOH
HOH
423
A
HOH
35
6
HOH
HOH
424
A
HOH
36
6
HOH
HOH
425
A
HOH
37
6
HOH
HOH
426
A
HOH
38
6
HOH
HOH
427
A
HOH
39
6
HOH
HOH
428
A
HOH
40
6
HOH
HOH
429
A
HOH
41
6
HOH
HOH
430
A
HOH
42
6
HOH
HOH
431
A
HOH
43
6
HOH
HOH
432
A
HOH
44
6
HOH
HOH
433
A
HOH
45
6
HOH
HOH
434
A
HOH
46
6
HOH
HOH
435
A
HOH
48
6
HOH
HOH
436
A
HOH
49
6
HOH
HOH
437
A
HOH
50
6
HOH
HOH
438
A
HOH
52
6
HOH
HOH
439
A
HOH
53
6
HOH
HOH
440
A
HOH
54
6
HOH
HOH
441
A
HOH
55
6
HOH
HOH
442
A
HOH
57
6
HOH
HOH
443
A
HOH
58
6
HOH
HOH
444
A
HOH
60
6
HOH
HOH
445
A
HOH
62
6
HOH
HOH
446
A
HOH
65
6
HOH
HOH
447
A
HOH
66
6
HOH
HOH
448
A
HOH
67
6
HOH
HOH
449
A
HOH
68
6
HOH
HOH
450
A
HOH
71
6
HOH
HOH
451
A
HOH
72
6
HOH
HOH
452
A
HOH
73
6
HOH
HOH
453
A
HOH
74
6
HOH
HOH
454
A
HOH
75
6
HOH
HOH
455
A
HOH
77
6
HOH
HOH
456
A
HOH
78
6
HOH
HOH
457
A
HOH
79
6
HOH
HOH
458
A
HOH
80
6
HOH
HOH
459
A
HOH
81
6
HOH
HOH
460
A
HOH
82
6
HOH
HOH
461
A
HOH
83
6
HOH
HOH
462
A
HOH
84
6
HOH
HOH
463
A
HOH
86
6
HOH
HOH
464
A
HOH
88
6
HOH
HOH
465
A
HOH
90
6
HOH
HOH
466
A
HOH
91
6
HOH
HOH
467
A
HOH
92
6
HOH
HOH
468
A
HOH
93
6
HOH
HOH
469
A
HOH
94
6
HOH
HOH
470
A
HOH
95
6
HOH
HOH
471
A
HOH
96
6
HOH
HOH
472
A
HOH
98
6
HOH
HOH
473
A
HOH
99
6
HOH
HOH
474
A
HOH
102
6
HOH
HOH
475
A
HOH
103
6
HOH
HOH
476
A
HOH
105
6
HOH
HOH
477
A
HOH
106
6
HOH
HOH
478
A
HOH
110
6
HOH
HOH
479
A
HOH
112
6
HOH
HOH
480
A
HOH
113
6
HOH
HOH
481
A
HOH
114
6
HOH
HOH
482
A
HOH
116
6
HOH
HOH
483
A
HOH
117
6
HOH
HOH
484
A
HOH
118
6
HOH
HOH
485
A
HOH
120
6
HOH
HOH
486
A
HOH
122
6
HOH
HOH
487
A
HOH
123
6
HOH
HOH
488
A
HOH
124
6
HOH
HOH
489
A
HOH
125
6
HOH
HOH
490
A
HOH
126
6
HOH
HOH
491
A
HOH
127
6
HOH
HOH
492
A
HOH
129
6
HOH
HOH
493
A
HOH
131
6
HOH
HOH
494
A
HOH
134
6
HOH
HOH
495
A
HOH
137
6
HOH
HOH
496
A
HOH
139
6
HOH
HOH
497
A
HOH
140
6
HOH
HOH
498
A
HOH
141
6
HOH
HOH
499
A
HOH
143
6
HOH
HOH
500
A
HOH
145
6
HOH
HOH
501
A
HOH
147
6
HOH
HOH
502
A
HOH
148
6
HOH
HOH
503
A
HOH
149
6
HOH
HOH
504
A
HOH
151
6
HOH
HOH
505
A
HOH
153
6
HOH
HOH
506
A
HOH
154
6
HOH
HOH
507
A
HOH
155
6
HOH
HOH
508
A
HOH
156
6
HOH
HOH
509
A
HOH
157
6
HOH
HOH
510
A
HOH
160
6
HOH
HOH
511
A
HOH
161
6
HOH
HOH
512
A
HOH
162
6
HOH
HOH
513
A
HOH
167
6
HOH
HOH
514
A
HOH
168
6
HOH
HOH
515
A
HOH
170
6
HOH
HOH
516
A
HOH
171
6
HOH
HOH
517
A
HOH
172
6
HOH
HOH
518
A
HOH
173
6
HOH
HOH
519
A
HOH
175
6
HOH
HOH
520
A
HOH
177
6
HOH
HOH
521
A
HOH
180
6
HOH
HOH
522
A
HOH
181
6
HOH
HOH
523
A
HOH
182
6
HOH
HOH
524
A
HOH
183
6
HOH
HOH
525
A
HOH
185
6
HOH
HOH
526
A
HOH
186
6
HOH
HOH
527
A
HOH
187
6
HOH
HOH
528
A
HOH
188
6
HOH
HOH
529
A
HOH
189
6
HOH
HOH
530
A
HOH
190
6
HOH
HOH
531
A
HOH
192
6
HOH
HOH
532
A
HOH
193
6
HOH
HOH
533
A
HOH
194
6
HOH
HOH
534
A
HOH
198
6
HOH
HOH
535
A
HOH
199
6
HOH
HOH
536
A
HOH
204
6
HOH
HOH
537
A
HOH
208
6
HOH
HOH
538
A
HOH
209
6
HOH
HOH
539
A
HOH
211
6
HOH
HOH
540
A
HOH
212
6
HOH
HOH
541
A
HOH
213
6
HOH
HOH
542
A
HOH
215
6
HOH
HOH
543
A
HOH
216
6
HOH
HOH
544
A
HOH
217
6
HOH
HOH
545
A
HOH
218
6
HOH
HOH
546
A
HOH
220
6
HOH
HOH
547
A
HOH
221
6
HOH
HOH
548
A
HOH
222
6
HOH
HOH
549
A
HOH
223
6
HOH
HOH
550
A
HOH
224
6
HOH
HOH
551
A
HOH
225
6
HOH
HOH
552
A
HOH
229
6
HOH
HOH
553
A
HOH
234
6
HOH
HOH
554
A
HOH
235
6
HOH
HOH
555
A
HOH
236
6
HOH
HOH
556
A
HOH
238
6
HOH
HOH
557
A
HOH
239
6
HOH
HOH
558
A
HOH
240
6
HOH
HOH
559
A
HOH
241
6
HOH
HOH
560
A
HOH
243
6
HOH
HOH
561
A
HOH
244
6
HOH
HOH
562
A
HOH
245
6
HOH
HOH
563
A
HOH
246
6
HOH
HOH
564
A
HOH
248
6
HOH
HOH
565
A
HOH
251
6
HOH
HOH
566
A
HOH
252
6
HOH
HOH
567
A
HOH
253
6
HOH
HOH
568
A
HOH
254
6
HOH
HOH
569
A
HOH
256
6
HOH
HOH
570
A
HOH
257
6
HOH
HOH
571
A
HOH
259
6
HOH
HOH
572
A
HOH
260
6
HOH
HOH
573
A
HOH
261
6
HOH
HOH
574
A
HOH
262
6
HOH
HOH
575
A
HOH
265
6
HOH
HOH
576
A
HOH
266
6
HOH
HOH
577
A
HOH
268
6
HOH
HOH
578
A
HOH
270
6
HOH
HOH
579
A
HOH
271
6
HOH
HOH
580
A
HOH
272
6
HOH
HOH
581
A
HOH
273
6
HOH
HOH
582
A
HOH
274
6
HOH
HOH
583
A
HOH
275
6
HOH
HOH
584
A
HOH
277
6
HOH
HOH
585
A
HOH
278
6
HOH
HOH
586
A
HOH
279
6
HOH
HOH
587
A
HOH
280
6
HOH
HOH
588
A
HOH
281
6
HOH
HOH
589
A
HOH
286
6
HOH
HOH
590
A
HOH
287
6
HOH
HOH
591
A
HOH
289
6
HOH
HOH
592
A
HOH
293
6
HOH
HOH
593
A
HOH
294
6
HOH
HOH
594
A
HOH
295
6
HOH
HOH
595
A
HOH
296
6
HOH
HOH
596
A
HOH
297
6
HOH
HOH
597
A
HOH
299
6
HOH
HOH
598
A
HOH
300
6
HOH
HOH
599
A
HOH
302
6
HOH
HOH
600
A
HOH
303
6
HOH
HOH
601
A
HOH
304
6
HOH
HOH
602
A
HOH
306
6
HOH
HOH
603
A
HOH
307
6
HOH
HOH
604
A
HOH
308
6
HOH
HOH
605
A
HOH
310
6
HOH
HOH
606
A
HOH
311
6
HOH
HOH
607
A
HOH
313
6
HOH
HOH
608
A
HOH
314
6
HOH
HOH
609
A
HOH
315
6
HOH
HOH
610
A
HOH
321
6
HOH
HOH
611
A
HOH
324
6
HOH
HOH
612
A
HOH
325
6
HOH
HOH
613
A
HOH
326
6
HOH
HOH
614
A
HOH
330
6
HOH
HOH
615
A
HOH
331
6
HOH
HOH
616
A
HOH
332
6
HOH
HOH
617
A
HOH
333
6
HOH
HOH
618
A
HOH
335
6
HOH
HOH
619
A
HOH
336
6
HOH
HOH
620
A
HOH
337
6
HOH
HOH
621
A
HOH
338
6
HOH
HOH
622
A
HOH
339
6
HOH
HOH
623
A
HOH
340
6
HOH
HOH
624
A
HOH
341
6
HOH
HOH
625
A
HOH
342
6
HOH
HOH
626
A
HOH
343
6
HOH
HOH
627
A
HOH
344
6
HOH
HOH
628
A
HOH
347
6
HOH
HOH
629
A
HOH
350
6
HOH
HOH
630
A
HOH
351
6
HOH
HOH
631
A
HOH
352
6
HOH
HOH
632
A
HOH
357
6
HOH
HOH
633
A
HOH
358
6
HOH
HOH
634
A
HOH
359
6
HOH
HOH
635
A
HOH
360
6
HOH
HOH
636
A
HOH
362
6
HOH
HOH
637
A
HOH
366
6
HOH
HOH
638
A
HOH
367
6
HOH
HOH
639
A
HOH
369
6
HOH
HOH
640
A
HOH
370
6
HOH
HOH
641
A
HOH
372
6
HOH
HOH
642
A
HOH
374
6
HOH
HOH
643
A
HOH
375
6
HOH
HOH
644
A
HOH
376
6
HOH
HOH
645
A
HOH
377
6
HOH
HOH
646
A
HOH
380
6
HOH
HOH
647
A
HOH
381
6
HOH
HOH
648
A
HOH
382
6
HOH
HOH
649
A
HOH
383
6
HOH
HOH
650
A
HOH
384
6
HOH
HOH
651
A
HOH
385
6
HOH
HOH
652
A
HOH
387
6
HOH
HOH
653
A
HOH
388
6
HOH
HOH
654
A
HOH
392
6
HOH
HOH
655
A
HOH
394
6
HOH
HOH
656
A
HOH
398
6
HOH
HOH
657
A
HOH
400
6
HOH
HOH
658
A
HOH
401
6
HOH
HOH
659
A
HOH
402
6
HOH
HOH
660
A
HOH
404
6
HOH
HOH
661
A
HOH
405
6
HOH
HOH
662
A
HOH
406
6
HOH
HOH
663
A
HOH
411
6
HOH
HOH
664
A
HOH
412
6
HOH
HOH
665
A
HOH
413
6
HOH
HOH
666
A
HOH
414
6
HOH
HOH
667
A
HOH
416
6
HOH
HOH
668
A
HOH
419
6
HOH
HOH
669
A
HOH
420
6
HOH
HOH
670
A
HOH
422
6
HOH
HOH
671
A
HOH
423
6
HOH
HOH
672
A
HOH
426
6
HOH
HOH
673
A
HOH
427
6
HOH
HOH
674
A
HOH
428
6
HOH
HOH
675
A
HOH
429
6
HOH
HOH
676
A
HOH
431
6
HOH
HOH
677
A
HOH
432
6
HOH
HOH
678
A
HOH
434
6
HOH
HOH
679
A
HOH
435
6
HOH
HOH
680
A
HOH
436
6
HOH
HOH
681
A
HOH
439
6
HOH
HOH
682
A
HOH
440
6
HOH
HOH
683
A
HOH
443
6
HOH
HOH
684
A
HOH
445
6
HOH
HOH
685
A
HOH
446
6
HOH
HOH
686
A
HOH
447
6
HOH
HOH
687
A
HOH
449
6
HOH
HOH
688
A
HOH
451
6
HOH
HOH
689
A
HOH
452
6
HOH
HOH
690
A
HOH
454
6
HOH
HOH
691
A
HOH
455
6
HOH
HOH
692
A
HOH
456
6
HOH
HOH
693
A
HOH
457
6
HOH
HOH
694
A
HOH
458
6
HOH
HOH
695
A
HOH
459
6
HOH
HOH
696
A
HOH
460
6
HOH
HOH
697
A
HOH
206
6
HOH
HOH
698
A
HOH
301
6
HOH
HOH
699
A
HOH
128
6
HOH
HOH
700
A
HOH
4
6
HOH
HOH
201
B
HOH
6
6
HOH
HOH
202
B
HOH
9
6
HOH
HOH
203
B
HOH
10
6
HOH
HOH
204
B
HOH
11
6
HOH
HOH
205
B
HOH
19
6
HOH
HOH
206
B
HOH
25
6
HOH
HOH
207
B
HOH
29
6
HOH
HOH
208
B
HOH
32
6
HOH
HOH
209
B
HOH
34
6
HOH
HOH
210
B
HOH
47
6
HOH
HOH
211
B
HOH
56
6
HOH
HOH
212
B
HOH
59
6
HOH
HOH
213
B
HOH
63
6
HOH
HOH
214
B
HOH
64
6
HOH
HOH
215
B
HOH
69
6
HOH
HOH
216
B
HOH
70
6
HOH
HOH
217
B
HOH
76
6
HOH
HOH
218
B
HOH
85
6
HOH
HOH
219
B
HOH
87
6
HOH
HOH
220
B
HOH
89
6
HOH
HOH
221
B
HOH
97
6
HOH
HOH
222
B
HOH
100
6
HOH
HOH
223
B
HOH
101
6
HOH
HOH
224
B
HOH
107
6
HOH
HOH
225
B
HOH
108
6
HOH
HOH
226
B
HOH
109
6
HOH
HOH
227
B
HOH
111
6
HOH
HOH
228
B
HOH
115
6
HOH
HOH
229
B
HOH
119
6
HOH
HOH
230
B
HOH
121
6
HOH
HOH
231
B
HOH
133
6
HOH
HOH
232
B
HOH
135
6
HOH
HOH
233
B
HOH
138
6
HOH
HOH
234
B
HOH
142
6
HOH
HOH
235
B
HOH
146
6
HOH
HOH
236
B
HOH
150
6
HOH
HOH
237
B
HOH
152
6
HOH
HOH
238
B
HOH
158
6
HOH
HOH
239
B
HOH
159
6
HOH
HOH
240
B
HOH
163
6
HOH
HOH
241
B
HOH
164
6
HOH
HOH
242
B
HOH
165
6
HOH
HOH
243
B
HOH
166
6
HOH
HOH
244
B
HOH
169
6
HOH
HOH
245
B
HOH
174
6
HOH
HOH
246
B
HOH
176
6
HOH
HOH
247
B
HOH
178
6
HOH
HOH
248
B
HOH
179
6
HOH
HOH
249
B
HOH
184
6
HOH
HOH
250
B
HOH
191
6
HOH
HOH
251
B
HOH
195
6
HOH
HOH
252
B
HOH
196
6
HOH
HOH
253
B
HOH
197
6
HOH
HOH
254
B
HOH
200
6
HOH
HOH
255
B
HOH
201
6
HOH
HOH
256
B
HOH
205
6
HOH
HOH
257
B
HOH
207
6
HOH
HOH
258
B
HOH
210
6
HOH
HOH
259
B
HOH
227
6
HOH
HOH
260
B
HOH
230
6
HOH
HOH
261
B
HOH
231
6
HOH
HOH
262
B
HOH
232
6
HOH
HOH
263
B
HOH
233
6
HOH
HOH
264
B
HOH
242
6
HOH
HOH
265
B
HOH
247
6
HOH
HOH
266
B
HOH
249
6
HOH
HOH
267
B
HOH
250
6
HOH
HOH
268
B
HOH
255
6
HOH
HOH
269
B
HOH
258
6
HOH
HOH
270
B
HOH
263
6
HOH
HOH
271
B
HOH
267
6
HOH
HOH
272
B
HOH
269
6
HOH
HOH
273
B
HOH
276
6
HOH
HOH
274
B
HOH
282
6
HOH
HOH
275
B
HOH
283
6
HOH
HOH
276
B
HOH
288
6
HOH
HOH
277
B
HOH
290
6
HOH
HOH
278
B
HOH
292
6
HOH
HOH
279
B
HOH
298
6
HOH
HOH
280
B
HOH
305
6
HOH
HOH
281
B
HOH
309
6
HOH
HOH
282
B
HOH
312
6
HOH
HOH
283
B
HOH
316
6
HOH
HOH
284
B
HOH
319
6
HOH
HOH
285
B
HOH
328
6
HOH
HOH
286
B
HOH
345
6
HOH
HOH
287
B
HOH
348
6
HOH
HOH
288
B
HOH
349
6
HOH
HOH
289
B
HOH
353
6
HOH
HOH
290
B
HOH
354
6
HOH
HOH
291
B
HOH
355
6
HOH
HOH
292
B
HOH
361
6
HOH
HOH
293
B
HOH
364
6
HOH
HOH
294
B
HOH
365
6
HOH
HOH
295
B
HOH
371
6
HOH
HOH
296
B
HOH
386
6
HOH
HOH
297
B
HOH
389
6
HOH
HOH
298
B
HOH
390
6
HOH
HOH
299
B
HOH
391
6
HOH
HOH
300
B
HOH
393
6
HOH
HOH
301
B
HOH
395
6
HOH
HOH
302
B
HOH
415
6
HOH
HOH
303
B
HOH
417
6
HOH
HOH
304
B
HOH
421
6
HOH
HOH
305
B
HOH
424
6
HOH
HOH
306
B
HOH
430
6
HOH
HOH
307
B
HOH
437
6
HOH
HOH
308
B
HOH
438
6
HOH
HOH
309
B
HOH
444
6
HOH
HOH
310
B
HOH
453
6
HOH
HOH
311
B
HOH
22
6
HOH
HOH
101
C
HOH
61
6
HOH
HOH
102
C
HOH
104
6
HOH
HOH
103
C
HOH
130
6
HOH
HOH
104
C
HOH
329
6
HOH
HOH
105
C
HOH
334
6
HOH
HOH
106
C
HOH
346
6
HOH
HOH
107
C
GLY
1
n
1
GLY
1
A
PRO
2
n
2
PRO
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
LEU
5
n
5
LEU
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
PHE
8
n
8
PHE
8
A
VAL
9
n
9
VAL
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
VAL
12
n
12
VAL
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
PRO
15
n
15
PRO
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
TYR
22
n
22
TYR
22
A
MET
23
n
23
MET
23
A
GLU
24
n
24
GLU
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
VAL
28
n
28
VAL
28
A
ASP
29
n
29
ASP
29
A
ASP
30
n
30
ASP
30
A
THR
31
n
31
THR
31
A
GLU
32
n
32
GLU
32
A
PHE
33
n
33
PHE
33
A
VAL
34
n
34
VAL
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
GLU
41
n
41
GLU
41
A
ASN
42
n
42
ASN
42
A
PRO
43
n
43
PRO
43
A
ARG
44
n
44
ARG
44
A
TYR
45
n
45
TYR
45
A
GLU
46
n
46
GLU
46
A
PRO
47
n
47
PRO
47
A
ARG
48
n
48
ARG
48
A
ALA
49
n
49
ALA
49
A
ARG
50
n
50
ARG
50
A
TRP
51
n
51
TRP
51
A
MET
52
n
52
MET
52
A
GLU
53
n
53
GLU
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
TYR
59
n
59
TYR
59
A
TRP
60
n
60
TRP
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
GLU
63
n
63
GLU
63
A
THR
64
n
64
THR
64
A
GLN
65
n
65
GLN
65
A
LYS
66
n
66
LYS
66
A
ALA
67
n
67
ALA
67
A
LYS
68
n
68
LYS
68
A
GLY
69
n
69
GLY
69
A
ASN
70
n
70
ASN
70
A
GLU
71
n
71
GLU
71
A
GLN
72
n
72
GLN
72
A
SER
73
n
73
SER
73
A
PHE
74
n
74
PHE
74
A
ARG
75
n
75
ARG
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
LEU
78
n
78
LEU
78
A
ARG
79
n
79
ARG
79
A
THR
80
n
80
THR
80
A
LEU
81
n
81
LEU
81
A
LEU
82
n
82
LEU
82
A
GLY
83
n
83
GLY
83
A
CYS
84
n
84
CYS
84
A
TYR
85
n
85
TYR
85
A
ASN
86
n
86
ASN
86
A
GLN
87
n
87
GLN
87
A
SER
88
n
88
SER
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
GLY
91
n
91
GLY
91
A
SER
92
n
92
SER
92
A
HIS
93
n
93
HIS
93
A
THR
94
n
94
THR
94
A
ILE
95
n
95
ILE
95
A
GLN
96
n
96
GLN
96
A
VAL
97
n
97
VAL
97
A
ILE
98
n
98
ILE
98
A
SER
99
n
99
SER
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
GLU
102
n
102
GLU
102
A
VAL
103
n
103
VAL
103
A
GLY
104
n
104
GLY
104
A
SER
105
n
105
SER
105
A
ASP
106
n
106
ASP
106
A
GLY
107
n
107
GLY
107
A
ARG
108
n
108
ARG
108
A
LEU
109
n
109
LEU
109
A
LEU
110
n
110
LEU
110
A
ARG
111
n
111
ARG
111
A
GLY
112
n
112
GLY
112
A
TYR
113
n
113
TYR
113
A
GLN
114
n
114
GLN
114
A
GLN
115
n
115
GLN
115
A
TYR
116
n
116
TYR
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
CYS
121
n
121
CYS
121
A
ASP
122
n
122
ASP
122
A
TYR
123
n
123
TYR
123
A
ILE
124
n
124
ILE
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
ASN
127
n
127
ASN
127
A
GLU
128
n
128
GLU
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
LYS
131
n
131
LYS
131
A
THR
132
n
132
THR
132
A
TRP
133
n
133
TRP
133
A
THR
134
n
134
THR
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
MET
138
n
138
MET
138
A
CYS
139
n
139
CYS
139
A
ALA
140
n
140
ALA
140
A
LEU
141
n
141
LEU
141
A
ILE
142
n
142
ILE
142
A
THR
143
n
143
THR
143
A
LYS
144
n
144
LYS
144
A
HIS
145
n
145
HIS
145
A
LYS
146
n
146
LYS
146
A
TRP
147
n
147
TRP
147
A
GLU
148
n
148
GLU
148
A
GLN
149
n
149
GLN
149
A
ALA
150
n
150
ALA
150
A
GLY
151
n
151
GLY
151
A
GLU
152
n
152
GLU
152
A
ALA
153
n
153
ALA
153
A
GLU
154
n
154
GLU
154
A
ARG
155
n
155
ARG
155
A
LEU
156
n
156
LEU
156
A
ARG
157
n
157
ARG
157
A
ALA
158
n
158
ALA
158
A
TYR
159
n
159
TYR
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
THR
163
n
163
THR
163
A
CYS
164
n
164
CYS
164
A
VAL
165
n
165
VAL
165
A
GLU
166
n
166
GLU
166
A
TRP
167
n
167
TRP
167
A
LEU
168
n
168
LEU
168
A
ARG
169
n
169
ARG
169
A
ARG
170
n
170
ARG
170
A
TYR
171
n
171
TYR
171
A
LEU
172
n
172
LEU
172
A
LYS
173
n
173
LYS
173
A
ASN
174
n
174
ASN
174
A
GLY
175
n
175
GLY
175
A
ASN
176
n
176
ASN
176
A
ALA
177
n
177
ALA
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
LEU
180
n
180
LEU
180
A
ARG
181
n
181
ARG
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
ALA
187
n
187
ALA
187
A
HIS
188
n
188
HIS
188
A
VAL
189
n
189
VAL
189
A
THR
190
n
190
THR
190
A
HIS
191
n
191
HIS
191
A
HIS
192
n
192
HIS
192
A
SER
193
n
193
SER
193
A
ARG
194
n
194
ARG
194
A
PRO
195
n
195
PRO
195
A
GLU
196
n
196
GLU
196
A
ASP
197
n
197
ASP
197
A
LYS
198
n
198
LYS
198
A
VAL
199
n
199
VAL
199
A
THR
200
n
200
THR
200
A
LEU
201
n
201
LEU
201
A
ARG
202
n
202
ARG
202
A
CYS
203
n
203
CYS
203
A
TRP
204
n
204
TRP
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
TYR
209
n
209
TYR
209
A
PRO
210
n
210
PRO
210
A
ALA
211
n
211
ALA
211
A
ASP
212
n
212
ASP
212
A
ILE
213
n
213
ILE
213
A
THR
214
n
214
THR
214
A
LEU
215
n
215
LEU
215
A
THR
216
n
216
THR
216
A
TRP
217
n
217
TRP
217
A
GLN
218
n
218
GLN
218
A
LEU
219
n
219
LEU
219
A
ASN
220
n
220
ASN
220
A
GLY
221
n
221
GLY
221
A
GLU
222
n
222
GLU
222
A
GLU
223
n
223
GLU
223
A
LEU
224
n
224
LEU
224
A
ILE
225
n
225
ILE
225
A
GLN
226
n
226
GLN
226
A
ASP
227
n
227
ASP
227
A
MET
228
n
228
MET
228
A
GLU
229
n
229
GLU
229
A
LEU
230
n
230
LEU
230
A
VAL
231
n
231
VAL
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
ARG
234
n
234
ARG
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
GLY
239
n
239
GLY
239
A
THR
240
n
240
THR
240
A
PHE
241
n
241
PHE
241
A
GLN
242
n
242
GLN
242
A
LYS
243
n
243
LYS
243
A
TRP
244
n
244
TRP
244
A
ALA
245
n
245
ALA
245
A
SER
246
n
246
SER
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
VAL
249
n
249
VAL
249
A
PRO
250
n
250
PRO
250
A
LEU
251
n
251
LEU
251
A
GLY
252
n
252
GLY
252
A
LYS
253
n
253
LYS
253
A
GLU
254
n
254
GLU
254
A
GLN
255
n
255
GLN
255
A
TYR
256
n
256
TYR
256
A
TYR
257
n
257
TYR
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
HIS
260
n
260
HIS
260
A
VAL
261
n
261
VAL
261
A
TYR
262
n
262
TYR
262
A
HIS
263
n
263
HIS
263
A
GLN
264
n
264
GLN
264
A
GLY
265
n
265
GLY
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
GLU
268
n
268
GLU
268
A
PRO
269
n
269
PRO
269
A
LEU
270
n
270
LEU
270
A
THR
271
n
271
THR
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
TRP
274
n
274
TRP
274
A
GLU
275
n
275
GLU
275
A
PRO
276
n
276
PRO
276
A
ILE
1
n
1
ILE
1
B
GLN
2
n
2
GLN
2
B
LYS
3
n
3
LYS
3
B
THR
4
n
4
THR
4
B
PRO
5
n
5
PRO
5
B
GLN
6
n
6
GLN
6
B
ILE
7
n
7
ILE
7
B
GLN
8
n
8
GLN
8
B
VAL
9
n
9
VAL
9
B
TYR
10
n
10
TYR
10
B
SER
11
n
11
SER
11
B
ARG
12
n
12
ARG
12
B
HIS
13
n
13
HIS
13
B
PRO
14
n
14
PRO
14
B
PRO
15
n
15
PRO
15
B
GLU
16
n
16
GLU
16
B
ASN
17
n
17
ASN
17
B
GLY
18
n
18
GLY
18
B
LYS
19
n
19
LYS
19
B
PRO
20
n
20
PRO
20
B
ASN
21
n
21
ASN
21
B
ILE
22
n
22
ILE
22
B
LEU
23
n
23
LEU
23
B
ASN
24
n
24
ASN
24
B
CYS
25
n
25
CYS
25
B
TYR
26
n
26
TYR
26
B
VAL
27
n
27
VAL
27
B
THR
28
n
28
THR
28
B
GLN
29
n
29
GLN
29
B
PHE
30
n
30
PHE
30
B
HIS
31
n
31
HIS
31
B
PRO
32
n
32
PRO
32
B
PRO
33
n
33
PRO
33
B
HIS
34
n
34
HIS
34
B
ILE
35
n
35
ILE
35
B
GLU
36
n
36
GLU
36
B
ILE
37
n
37
ILE
37
B
GLN
38
n
38
GLN
38
B
MET
39
n
39
MET
39
B
LEU
40
n
40
LEU
40
B
LYS
41
n
41
LYS
41
B
ASN
42
n
42
ASN
42
B
GLY
43
n
43
GLY
43
B
LYS
44
n
44
LYS
44
B
LYS
45
n
45
LYS
45
B
ILE
46
n
46
ILE
46
B
PRO
47
n
47
PRO
47
B
LYS
48
n
48
LYS
48
B
VAL
49
n
49
VAL
49
B
GLU
50
n
50
GLU
50
B
MET
51
n
51
MET
51
B
SER
52
n
52
SER
52
B
ASP
53
n
53
ASP
53
B
MET
54
n
54
MET
54
B
SER
55
n
55
SER
55
B
PHE
56
n
56
PHE
56
B
SER
57
n
57
SER
57
B
LYS
58
n
58
LYS
58
B
ASP
59
n
59
ASP
59
B
TRP
60
n
60
TRP
60
B
SER
61
n
61
SER
61
B
PHE
62
n
62
PHE
62
B
TYR
63
n
63
TYR
63
B
ILE
64
n
64
ILE
64
B
LEU
65
n
65
LEU
65
B
ALA
66
n
66
ALA
66
B
HIS
67
n
67
HIS
67
B
THR
68
n
68
THR
68
B
GLU
69
n
69
GLU
69
B
PHE
70
n
70
PHE
70
B
THR
71
n
71
THR
71
B
PRO
72
n
72
PRO
72
B
THR
73
n
73
THR
73
B
GLU
74
n
74
GLU
74
B
THR
75
n
75
THR
75
B
ASP
76
n
76
ASP
76
B
THR
77
n
77
THR
77
B
TYR
78
n
78
TYR
78
B
ALA
79
n
79
ALA
79
B
CYS
80
n
80
CYS
80
B
ARG
81
n
81
ARG
81
B
VAL
82
n
82
VAL
82
B
LYS
83
n
83
LYS
83
B
HIS
84
n
84
HIS
84
B
ASP
85
n
85
ASP
85
B
SER
86
n
86
SER
86
B
MET
87
n
87
MET
87
B
ALA
88
n
88
ALA
88
B
GLU
89
n
89
GLU
89
B
PRO
90
n
90
PRO
90
B
LYS
91
n
91
LYS
91
B
THR
92
n
92
THR
92
B
VAL
93
n
93
VAL
93
B
TYR
94
n
94
TYR
94
B
TRP
95
n
95
TRP
95
B
ASP
96
n
96
ASP
96
B
ARG
97
n
97
ARG
97
B
ASP
98
n
98
ASP
98
B
MET
99
n
99
MET
99
B
ALA
1
n
1
ALA
1
C
VAL
2
n
2
VAL
2
C
TYR
3
n
3
TYR
3
C
ASN
4
n
4
ASN
4
C
PHE
5
n
5
PHE
5
C
ALA
6
n
6
ALA
6
C
THR
7
n
7
THR
7
C
MET
8
n
8
MET
8
C
author_and_software_defined_assembly
PISA
3
trimeric
5020
-48
18980
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLU
46
A
O
GLU
46
A
N
ARG
35
A
N
ARG
35
A
O
PHE
36
A
O
PHE
36
A
N
GLU
24
A
N
GLU
24
A
O
VAL
25
A
O
VAL
25
A
N
PHE
8
A
N
PHE
8
A
N
LEU
5
A
N
LEU
5
A
O
CYS
101
A
O
CYS
101
A
N
GLU
102
A
N
GLU
102
A
O
LEU
110
A
O
LEU
110
A
N
TYR
116
A
N
TYR
116
A
O
ILE
124
A
O
ILE
124
A
N
ALA
125
A
N
ALA
125
A
O
THR
134
A
O
THR
134
A
N
HIS
192
A
N
HIS
192
A
O
THR
200
A
O
THR
200
A
N
VAL
199
A
N
VAL
199
A
O
VAL
249
A
O
VAL
249
A
O
SER
246
A
O
SER
246
A
N
GLU
229
A
N
GLU
229
A
N
HIS
192
A
N
HIS
192
A
O
THR
200
A
O
THR
200
A
N
VAL
199
A
N
VAL
199
A
O
VAL
249
A
O
VAL
249
A
O
GLN
242
A
O
GLN
242
A
N
ARG
234
A
N
ARG
234
A
N
GLN
218
A
N
GLN
218
A
O
THR
258
A
O
THR
258
A
N
CYS
259
A
N
CYS
259
A
O
LEU
272
A
O
LEU
272
B
N
GLN
8
B
N
GLN
8
B
O
TYR
26
B
O
TYR
26
B
N
CYS
25
B
N
CYS
25
B
O
ALA
66
B
O
ALA
66
B
O
LEU
65
B
O
LEU
65
B
N
SER
52
B
N
SER
52
B
O
LYS
44
B
O
LYS
44
B
N
LYS
41
B
N
LYS
41
B
N
GLN
38
B
N
GLN
38
B
O
ARG
81
B
O
ARG
81
B
N
CYS
80
B
N
CYS
80
B
O
VAL
93
B
O
VAL
93
1
A
HOH
616
F
HOH
1
A
ARG
14
-154.98
76.74
1
A
ASP
29
56.68
-131.42
1
A
ASP
122
-36.19
131.82
1
A
GLU
196
70.72
35.81
1
A
LEU
219
-101.82
-76.47
1
A
ASN
220
-119.38
76.88
-0.2119
-0.0000
0.0000
-3.4251
-0.0000
3.6370
0.2391
0.1872
0.1898
0.1898
2.100
39.043
1671
32908
32908
5.08
96.58
0.69
Random
1
0
MOLECULAR REPLACEMENT
23.11
0.90
1.11
1S7S
Engh & Huber
FLAT BULK SOLVENT MODEL
44.151
0.351
2.100
39.043
418
3559
13
0
3128
0.008
3260
1.065
4428
14.154
1210
0.072
454
0.004
579
0.2927
0.2261
2.1618
123
2610
97.00
0.3068
0.2244
2.2316
147
2522
97.00
0.2731
0.2432
2.3113
145
2561
97.00
0.2937
0.2222
2.4038
120
2619
97.00
0.2726
0.2113
2.5132
138
2572
97.00
0.2745
0.2016
2.6457
147
2556
97.00
0.2835
0.2007
2.8114
143
2582
97.00
0.2576
0.1887
3.0284
141
2574
96.00
0.2199
0.1661
3.3330
130
2562
95.00
0.2020
0.1651
3.8150
140
2592
95.00
0.1642
0.1403
4.8051
151
2602
95.00
0.2542
0.1960
39.0493
146
2885
99.00
21.76
2.10
40.86
4HS3
32975
32975
0
0
1
100
data collection
MxCuBE
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.7.1_743)
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of H-2Kb with a disulfide stabilized F pocket in complex with the LCMV derived peptide GP34
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
A
ALA
49
A
ALA
49
HELX_P
A
GLU
55
A
GLU
55
5
1
7
A
GLY
56
A
GLY
56
HELX_P
A
TYR
85
A
TYR
85
1
2
30
A
ASP
137
A
ASP
137
HELX_P
A
ALA
150
A
ALA
150
1
3
14
A
GLY
151
A
GLY
151
HELX_P
A
GLY
162
A
GLY
162
1
4
12
A
GLY
162
A
GLY
162
HELX_P
A
GLY
175
A
GLY
175
1
5
14
A
GLY
175
A
GLY
175
HELX_P
A
LEU
180
A
LEU
180
1
6
6
A
LYS
253
A
LYS
253
HELX_P
A
TYR
257
A
TYR
257
5
7
5
disulf
2.058
A
CYS
84
A
SG
CYS
84
1_555
A
CYS
139
A
SG
CYS
139
1_555
disulf
2.130
A
CYS
101
A
SG
CYS
101
1_555
A
CYS
164
A
SG
CYS
164
1_555
disulf
2.052
A
CYS
203
A
SG
CYS
203
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
2.047
B
CYS
25
B
SG
CYS
25
1_555
B
CYS
80
B
SG
CYS
80
1_555
IMMUNE SYSTEM
MHC class I, ANTIGEN PRESENTATION, ANTIGEN PROCESSING, PEPTIDE BINDING, IGG, MHC, IMMUNE SYSTEM
A
TYR
209
A
TYR
209
1
A
PRO
210
A
PRO
210
-1.54
B
HIS
31
B
HIS
31
1
B
PRO
32
B
PRO
32
9.62
HA1B_MOUSE
UNP
1
22
P01901
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYL
EGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT
FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRWEP
B2MG_MOUSE
UNP
2
21
P01887
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHASMAEPKTVYWDRDM
Q9WKU1_9VIRU
UNP
3
34
Q9WKU1
AVYNFATC
22
297
4HS3
1
276
P01901
A
1
1
276
21
119
4HS3
1
99
P01887
B
2
1
99
34
41
4HS3
1
8
Q9WKU1
C
3
1
8
1
TYR
engineered mutation
CYS
84
4HS3
A
P01901
UNP
105
84
1
ALA
engineered mutation
CYS
139
4HS3
A
P01901
UNP
160
139
2
ALA
variant
ASP
85
4HS3
B
P01887
UNP
105
85
3
CYS
engineered mutation
MET
8
4HS3
C
Q9WKU1
UNP
41
8
8
4
4
3
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
46
A
GLU
46
A
PRO
47
A
PRO
47
A
THR
31
A
THR
31
A
ASP
37
A
ASP
37
A
ARG
21
A
ARG
21
A
VAL
28
A
VAL
28
A
HIS
3
A
HIS
3
A
VAL
12
A
VAL
12
A
THR
94
A
THR
94
A
VAL
103
A
VAL
103
A
LEU
109
A
LEU
109
A
TYR
118
A
TYR
118
A
CYS
121
A
CYS
121
A
LEU
126
A
LEU
126
A
TRP
133
A
TRP
133
A
ALA
135
A
ALA
135
A
LYS
186
A
LYS
186
A
SER
193
A
SER
193
A
LYS
198
A
LYS
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
MET
228
A
MET
228
A
LEU
230
A
LEU
230
A
LYS
186
A
LYS
186
A
SER
193
A
SER
193
A
LYS
198
A
LYS
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
ARG
234
A
ARG
234
A
PRO
235
A
PRO
235
A
THR
214
A
THR
214
A
GLN
218
A
GLN
218
A
THR
258
A
THR
258
A
TYR
262
A
TYR
262
A
LEU
270
A
LEU
270
A
LEU
272
A
LEU
272
B
GLN
6
B
GLN
6
B
SER
11
B
SER
11
B
ASN
21
B
ASN
21
B
PHE
30
B
PHE
30
B
PHE
62
B
PHE
62
B
PHE
70
B
PHE
70
B
GLU
50
B
GLU
50
B
PHE
56
B
PHE
56
B
LYS
44
B
LYS
44
B
LYS
45
B
LYS
45
B
GLU
36
B
GLU
36
B
LYS
41
B
LYS
41
B
TYR
78
B
TYR
78
B
LYS
83
B
LYS
83
B
LYS
91
B
LYS
91
B
TYR
94
B
TYR
94
BINDING SITE FOR RESIDUE PO4 A 301
A
PO4
301
Software
6
BINDING SITE FOR RESIDUE MPD B 101
B
MPD
101
Software
3
A
ARG
14
A
ARG
14
6
1_555
A
ARG
21
A
ARG
21
6
1_555
A
HOH
494
F
HOH
6
1_555
A
HOH
636
F
HOH
6
1_555
B
HIS
34
B
HIS
34
6
1_555
B
MPD
101
E
MPD
6
1_555
A
PO4
301
D
PO4
3
1_555
A
HOH
494
F
HOH
3
1_555
B
PRO
33
B
PRO
33
3
1_555
18
P 2 21 21