0.015882 0.000000 0.000000 0.000000 0.015882 0.000000 0.000000 0.000000 0.005471 0.00000 0.00000 0.00000 Zhang, Y. Zhang, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 62.964 62.964 182.780 C22 H19 F3 N4 O 412.408 5-[(5-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)methyl]-N-[4-(trifluoromethyl)benzyl]pyridin-2-amine non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N N Y 4 N C Y 5 N N Y 6 N C Y 7 N C Y 8 N C Y 9 N C N 10 N O N 11 N C Y 12 N C Y 13 N C Y 14 N N Y 15 N C Y 16 N C Y 17 N C N 18 N C N 19 N N N 20 N C Y 21 N C Y 22 N C Y 23 N C Y 24 N C Y 25 N C Y 26 N C N 27 N C N 28 N F N 29 N F N 30 N F N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 S C N 52 N C N 53 N O N 54 N C N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N N N 64 S C N 65 N C N 66 N O N 67 N C N 68 N C N 69 N C N 70 N N N 71 N C N 72 N N N 73 N N N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N O N 114 N O N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 R C N 125 N C N 126 N O N 127 N C N 128 N S N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C N 142 N C N 143 N C N 144 N O N 145 N N N 146 N O N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N N N 158 S C N 159 N C N 160 N O N 161 N C N 162 N C N 163 N C N 164 N O N 165 N O N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N N N 177 N C N 178 N C N 179 N O N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C Y 191 N C Y 192 N N Y 193 N C Y 194 N C Y 195 N N N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 S C N 212 N C N 213 N C N 214 N C N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C N 234 N C N 235 N C N 236 N C N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N C N 259 N N N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N S N 283 N C N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N N N 297 S C N 298 N C N 299 N O N 300 N C Y 301 N C Y 302 N C Y 303 N C Y 304 N C Y 305 N C Y 306 N C N 307 N O N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N N N 320 S C N 321 N C N 322 N O N 323 N C N 324 N C N 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C N 341 N O N 342 N O N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 R C N 355 N O N 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N N Y 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C N 405 N O N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N N N 419 S C N 420 N C N 421 N O N 422 N C N 423 N C N 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H Y 1 N doub Y 2 N sing Y 3 N sing Y 4 N sing Y 5 N sing Y 6 N doub N 7 N sing Y 8 N doub Y 9 N doub Y 10 N sing Y 11 N sing Y 12 N doub N 13 N sing Y 14 N sing Y 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing Y 20 N doub Y 21 N doub N 22 N sing Y 23 N sing Y 24 N doub Y 25 N sing Y 26 N sing Y 27 N doub Y 28 N doub Y 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N doub N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing Y 192 N sing Y 193 N doub Y 194 N doub N 195 N sing Y 196 N sing N 197 N sing Y 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N doub Y 299 N sing Y 300 N sing N 301 N sing Y 302 N doub N 303 N sing Y 304 N doub N 305 N sing Y 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing Y 367 N doub Y 368 N sing Y 369 N sing N 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing N 374 N sing Y 375 N sing Y 376 N doub N 377 N sing Y 378 N doub N 379 N sing Y 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub N 400 N sing Y 401 N doub N 402 N sing Y 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 110 5689 5694 10.1073/pnas.1219457110 23493555 Design and pharmacology of a highly specific dual FMS and KIT kinase inhibitor. 2013 10.2210/pdb4hw7/pdb pdb_00004hw7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2012-08-11 ADSC QUANTUM 315r Double flat crystal, Si(111) SINGLE WAVELENGTH M x-ray 1 1.1159 1.0 8.3.1 ALS 1.1159 SYNCHROTRON ALS BEAMLINE 8.3.1 38640.176 Macrophage colony-stimulating factor 1 receptor 2.7.10.1 FMS kinase domain with KID C667T, C830S, C907T 1 man polymer 412.408 5-[(5-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)methyl]-N-[4-(trifluoromethyl)benzyl]pyridin-2-amine 1 syn non-polymer CSF-1 receptor, CSF-1-R, CSF-1R, M-CSF-R, Proto-oncogene c-Fms no no MKKGHHHHHHGQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCTYGDLLNFLRRKAEAMLGPSLSPG QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR LPVKWMAPESIFDSVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE PTHRPTFQQITSFLQEQAQEDRR MKKGHHHHHHGQKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCTYGDLLNFLRRKAEAMLGPSLSPG QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR LPVKWMAPESIFDSVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE PTHRPTFQQITSFLQEQAQEDRR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human FALL ARMYWORM sample CSF1R, FMS 9606 Homo sapiens SF9 7108 SPODOPTERA FRUGIPERDA BACULOVIRUS 1 2.35 47.59 VAPOR DIFFUSION, SITTING DROP 7.5 20% PEG8K, 0.2M MgCl and 0.1M Tris, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations 1 0 2013-03-27 1 1 2013-04-17 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-11-07 REL REL 64M 5-[(5-methoxy-1H-pyrrolo[2,3-b]pyridin-3-yl)methyl]-N-[4-(trifluoromethyl)benzyl]pyridin-2-amine 64M 1 2 64M 64M 1001 A n 1 531 A n 2 532 A n 3 533 A n 4 534 A n 5 535 A n 6 536 A n 7 537 A n 8 538 A n 9 539 A n 10 540 A n 11 541 A n 12 542 A n 13 543 A n 14 544 A n 15 545 A n 16 546 A n 17 547 A n 18 548 A n 19 549 A n 20 550 A n 21 551 A n 22 552 A n 23 553 A n 24 554 A n 25 555 A n 26 556 A n 27 557 A n 28 558 A n 29 559 A n 30 560 A n 31 561 A n 32 562 A n 33 563 A n 34 564 A n 35 565 A PRO 566 n 36 PRO 566 A THR 567 n 37 THR 567 A GLN 568 n 38 GLN 568 A LEU 569 n 39 LEU 569 A PRO 570 n 40 PRO 570 A TYR 571 n 41 TYR 571 A ASN 572 n 42 ASN 572 A GLU 573 n 43 GLU 573 A LYS 574 n 44 LYS 574 A TRP 575 n 45 TRP 575 A GLU 576 n 46 GLU 576 A PHE 577 n 47 PHE 577 A PRO 578 n 48 PRO 578 A ARG 579 n 49 ARG 579 A ASN 580 n 50 ASN 580 A ASN 581 n 51 ASN 581 A LEU 582 n 52 LEU 582 A GLN 583 n 53 GLN 583 A PHE 584 n 54 PHE 584 A GLY 585 n 55 GLY 585 A LYS 586 n 56 LYS 586 A THR 587 n 57 THR 587 A LEU 588 n 58 LEU 588 A GLY 589 n 59 GLY 589 A ALA 590 n 60 ALA 590 A GLY 591 n 61 GLY 591 A ALA 592 n 62 ALA 592 A PHE 593 n 63 PHE 593 A GLY 594 n 64 GLY 594 A LYS 595 n 65 LYS 595 A VAL 596 n 66 VAL 596 A VAL 597 n 67 VAL 597 A GLU 598 n 68 GLU 598 A ALA 599 n 69 ALA 599 A THR 600 n 70 THR 600 A ALA 601 n 71 ALA 601 A PHE 602 n 72 PHE 602 A GLY 603 n 73 GLY 603 A LEU 604 n 74 LEU 604 A GLY 605 n 75 GLY 605 A LYS 606 n 76 LYS 606 A GLU 607 n 77 GLU 607 A ASP 608 n 78 ASP 608 A ALA 609 n 79 ALA 609 A VAL 610 n 80 VAL 610 A LEU 611 n 81 LEU 611 A LYS 612 n 82 LYS 612 A VAL 613 n 83 VAL 613 A ALA 614 n 84 ALA 614 A VAL 615 n 85 VAL 615 A LYS 616 n 86 LYS 616 A MET 617 n 87 MET 617 A LEU 618 n 88 LEU 618 A LYS 619 n 89 LYS 619 A SER 620 n 90 SER 620 A THR 621 n 91 THR 621 A ALA 622 n 92 ALA 622 A HIS 623 n 93 HIS 623 A ALA 624 n 94 ALA 624 A ASP 625 n 95 ASP 625 A GLU 626 n 96 GLU 626 A LYS 627 n 97 LYS 627 A GLU 628 n 98 GLU 628 A ALA 629 n 99 ALA 629 A LEU 630 n 100 LEU 630 A MET 631 n 101 MET 631 A SER 632 n 102 SER 632 A GLU 633 n 103 GLU 633 A LEU 634 n 104 LEU 634 A LYS 635 n 105 LYS 635 A ILE 636 n 106 ILE 636 A MET 637 n 107 MET 637 A SER 638 n 108 SER 638 A HIS 639 n 109 HIS 639 A LEU 640 n 110 LEU 640 A GLY 641 n 111 GLY 641 A GLN 642 n 112 GLN 642 A HIS 643 n 113 HIS 643 A GLU 644 n 114 GLU 644 A ASN 645 n 115 ASN 645 A ILE 646 n 116 ILE 646 A VAL 647 n 117 VAL 647 A ASN 648 n 118 ASN 648 A LEU 649 n 119 LEU 649 A LEU 650 n 120 LEU 650 A GLY 651 n 121 GLY 651 A ALA 652 n 122 ALA 652 A CYS 653 n 123 CYS 653 A THR 654 n 124 THR 654 A HIS 655 n 125 HIS 655 A GLY 656 n 126 GLY 656 A GLY 657 n 127 GLY 657 A PRO 658 n 128 PRO 658 A VAL 659 n 129 VAL 659 A LEU 660 n 130 LEU 660 A VAL 661 n 131 VAL 661 A ILE 662 n 132 ILE 662 A THR 663 n 133 THR 663 A GLU 664 n 134 GLU 664 A TYR 665 n 135 TYR 665 A CYS 666 n 136 CYS 666 A THR 667 n 137 THR 667 A TYR 668 n 138 TYR 668 A GLY 669 n 139 GLY 669 A ASP 670 n 140 ASP 670 A LEU 671 n 141 LEU 671 A LEU 672 n 142 LEU 672 A ASN 673 n 143 ASN 673 A PHE 674 n 144 PHE 674 A LEU 675 n 145 LEU 675 A ARG 676 n 146 ARG 676 A ARG 677 n 147 ARG 677 A LYS 678 n 148 LYS 678 A ALA 679 n 149 ALA 679 A GLU 680 n 150 GLU 680 A ALA 681 n 151 ALA 681 A MET 682 n 152 MET 682 A LEU 683 n 153 LEU 683 A GLY 684 n 154 GLY 684 A PRO 685 n 155 PRO 685 A SER 686 n 156 SER 686 A n 157 733 A n 158 734 A n 159 735 A n 160 736 A n 161 737 A n 162 738 A n 163 739 A n 164 740 A n 165 741 A n 166 742 A n 167 743 A n 168 744 A n 169 745 A n 170 746 A GLY 747 n 171 GLY 747 A ARG 748 n 172 ARG 748 A PRO 749 n 173 PRO 749 A LEU 750 n 174 LEU 750 A GLU 751 n 175 GLU 751 A LEU 752 n 176 LEU 752 A ARG 753 n 177 ARG 753 A ASP 754 n 178 ASP 754 A LEU 755 n 179 LEU 755 A LEU 756 n 180 LEU 756 A HIS 757 n 181 HIS 757 A PHE 758 n 182 PHE 758 A SER 759 n 183 SER 759 A SER 760 n 184 SER 760 A GLN 761 n 185 GLN 761 A VAL 762 n 186 VAL 762 A ALA 763 n 187 ALA 763 A GLN 764 n 188 GLN 764 A GLY 765 n 189 GLY 765 A MET 766 n 190 MET 766 A ALA 767 n 191 ALA 767 A PHE 768 n 192 PHE 768 A LEU 769 n 193 LEU 769 A ALA 770 n 194 ALA 770 A SER 771 n 195 SER 771 A LYS 772 n 196 LYS 772 A ASN 773 n 197 ASN 773 A CYS 774 n 198 CYS 774 A ILE 775 n 199 ILE 775 A HIS 776 n 200 HIS 776 A ARG 777 n 201 ARG 777 A ASP 778 n 202 ASP 778 A VAL 779 n 203 VAL 779 A ALA 780 n 204 ALA 780 A ALA 781 n 205 ALA 781 A ARG 782 n 206 ARG 782 A ASN 783 n 207 ASN 783 A VAL 784 n 208 VAL 784 A LEU 785 n 209 LEU 785 A LEU 786 n 210 LEU 786 A THR 787 n 211 THR 787 A ASN 788 n 212 ASN 788 A GLY 789 n 213 GLY 789 A HIS 790 n 214 HIS 790 A VAL 791 n 215 VAL 791 A ALA 792 n 216 ALA 792 A LYS 793 n 217 LYS 793 A ILE 794 n 218 ILE 794 A GLY 795 n 219 GLY 795 A ASP 796 n 220 ASP 796 A PHE 797 n 221 PHE 797 A GLY 798 n 222 GLY 798 A LEU 799 n 223 LEU 799 A ALA 800 n 224 ALA 800 A ARG 801 n 225 ARG 801 A ASP 802 n 226 ASP 802 A ILE 803 n 227 ILE 803 A MET 804 n 228 MET 804 A ASN 805 n 229 ASN 805 A ASP 806 n 230 ASP 806 A SER 807 n 231 SER 807 A ASN 808 n 232 ASN 808 A TYR 809 n 233 TYR 809 A ILE 810 n 234 ILE 810 A VAL 811 n 235 VAL 811 A LYS 812 n 236 LYS 812 A GLY 813 n 237 GLY 813 A ASN 814 n 238 ASN 814 A ALA 815 n 239 ALA 815 A ARG 816 n 240 ARG 816 A LEU 817 n 241 LEU 817 A PRO 818 n 242 PRO 818 A VAL 819 n 243 VAL 819 A LYS 820 n 244 LYS 820 A TRP 821 n 245 TRP 821 A MET 822 n 246 MET 822 A ALA 823 n 247 ALA 823 A PRO 824 n 248 PRO 824 A GLU 825 n 249 GLU 825 A SER 826 n 250 SER 826 A ILE 827 n 251 ILE 827 A PHE 828 n 252 PHE 828 A ASP 829 n 253 ASP 829 A SER 830 n 254 SER 830 A VAL 831 n 255 VAL 831 A TYR 832 n 256 TYR 832 A THR 833 n 257 THR 833 A VAL 834 n 258 VAL 834 A GLN 835 n 259 GLN 835 A SER 836 n 260 SER 836 A ASP 837 n 261 ASP 837 A VAL 838 n 262 VAL 838 A TRP 839 n 263 TRP 839 A SER 840 n 264 SER 840 A TYR 841 n 265 TYR 841 A GLY 842 n 266 GLY 842 A ILE 843 n 267 ILE 843 A LEU 844 n 268 LEU 844 A LEU 845 n 269 LEU 845 A TRP 846 n 270 TRP 846 A GLU 847 n 271 GLU 847 A ILE 848 n 272 ILE 848 A PHE 849 n 273 PHE 849 A SER 850 n 274 SER 850 A LEU 851 n 275 LEU 851 A GLY 852 n 276 GLY 852 A LEU 853 n 277 LEU 853 A ASN 854 n 278 ASN 854 A PRO 855 n 279 PRO 855 A TYR 856 n 280 TYR 856 A PRO 857 n 281 PRO 857 A GLY 858 n 282 GLY 858 A ILE 859 n 283 ILE 859 A LEU 860 n 284 LEU 860 A VAL 861 n 285 VAL 861 A ASN 862 n 286 ASN 862 A SER 863 n 287 SER 863 A LYS 864 n 288 LYS 864 A PHE 865 n 289 PHE 865 A TYR 866 n 290 TYR 866 A LYS 867 n 291 LYS 867 A LEU 868 n 292 LEU 868 A VAL 869 n 293 VAL 869 A LYS 870 n 294 LYS 870 A ASP 871 n 295 ASP 871 A GLY 872 n 296 GLY 872 A TYR 873 n 297 TYR 873 A GLN 874 n 298 GLN 874 A MET 875 n 299 MET 875 A ALA 876 n 300 ALA 876 A GLN 877 n 301 GLN 877 A PRO 878 n 302 PRO 878 A ALA 879 n 303 ALA 879 A PHE 880 n 304 PHE 880 A ALA 881 n 305 ALA 881 A PRO 882 n 306 PRO 882 A LYS 883 n 307 LYS 883 A ASN 884 n 308 ASN 884 A ILE 885 n 309 ILE 885 A TYR 886 n 310 TYR 886 A SER 887 n 311 SER 887 A ILE 888 n 312 ILE 888 A MET 889 n 313 MET 889 A GLN 890 n 314 GLN 890 A ALA 891 n 315 ALA 891 A CYS 892 n 316 CYS 892 A TRP 893 n 317 TRP 893 A ALA 894 n 318 ALA 894 A LEU 895 n 319 LEU 895 A GLU 896 n 320 GLU 896 A PRO 897 n 321 PRO 897 A THR 898 n 322 THR 898 A HIS 899 n 323 HIS 899 A ARG 900 n 324 ARG 900 A PRO 901 n 325 PRO 901 A THR 902 n 326 THR 902 A PHE 903 n 327 PHE 903 A GLN 904 n 328 GLN 904 A GLN 905 n 329 GLN 905 A ILE 906 n 330 ILE 906 A THR 907 n 331 THR 907 A SER 908 n 332 SER 908 A PHE 909 n 333 PHE 909 A LEU 910 n 334 LEU 910 A GLN 911 n 335 GLN 911 A GLU 912 n 336 GLU 912 A GLN 913 n 337 GLN 913 A ALA 914 n 338 ALA 914 A n 339 915 A n 340 916 A n 341 917 A n 342 918 A n 343 919 A 1.5689 -1.1011 -1.0636 1.6957 0.2113 7.5040 0.1340 -0.0625 0.1119 -0.0227 -0.0516 -0.1716 0.0989 0.3495 -0.0889 0.2567 -0.0402 -0.0677 0.2945 -0.0121 0.3906 refined 36.4122 12.8322 82.4986 X-RAY DIFFRACTION 0.4707 -0.1697 0.5606 0.2164 -0.2464 0.6817 0.0585 0.0367 0.0222 -0.0899 0.1604 -0.0276 -0.0112 -0.1175 -0.1837 1.0599 0.0673 0.1187 1.2525 0.2331 0.7673 refined 36.5032 12.0848 74.8879 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain A and resid 566:914 X-RAY DIFFRACTION 2 chain A and resid 1001:1001 author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric 1960 -12 26090 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 182.7800000000 A N GLY 585 A N GLY 55 A O GLU 598 A O GLU 68 A N ALA 599 A N ALA 69 A O VAL 613 A O VAL 83 A N ALA 614 A N ALA 84 A O THR 663 A O THR 133 A O ILE 662 A O ILE 132 A N LEU 650 A N LEU 120 A N LEU 785 A N LEU 209 A O LYS 793 A O LYS 217 A N ILE 810 A N ILE 234 A O LEU 817 A O LEU 241 1 A MET 531 A MET 1 1 Y 1 A LYS 532 A LYS 2 1 Y 1 A LYS 533 A LYS 3 1 Y 1 A GLY 534 A GLY 4 1 Y 1 A HIS 535 A HIS 5 1 Y 1 A HIS 536 A HIS 6 1 Y 1 A HIS 537 A HIS 7 1 Y 1 A HIS 538 A HIS 8 1 Y 1 A HIS 539 A HIS 9 1 Y 1 A HIS 540 A HIS 10 1 Y 1 A GLY 541 A GLY 11 1 Y 1 A GLN 542 A GLN 12 1 Y 1 A LYS 543 A LYS 13 1 Y 1 A PRO 544 A PRO 14 1 Y 1 A LYS 545 A LYS 15 1 Y 1 A TYR 546 A TYR 16 1 Y 1 A GLN 547 A GLN 17 1 Y 1 A VAL 548 A VAL 18 1 Y 1 A ARG 549 A ARG 19 1 Y 1 A TRP 550 A TRP 20 1 Y 1 A LYS 551 A LYS 21 1 Y 1 A ILE 552 A ILE 22 1 Y 1 A ILE 553 A ILE 23 1 Y 1 A GLU 554 A GLU 24 1 Y 1 A SER 555 A SER 25 1 Y 1 A TYR 556 A TYR 26 1 Y 1 A GLU 557 A GLU 27 1 Y 1 A GLY 558 A GLY 28 1 Y 1 A ASN 559 A ASN 29 1 Y 1 A SER 560 A SER 30 1 Y 1 A TYR 561 A TYR 31 1 Y 1 A THR 562 A THR 32 1 Y 1 A PHE 563 A PHE 33 1 Y 1 A ILE 564 A ILE 34 1 Y 1 A ASP 565 A ASP 35 1 Y 1 A LEU 733 A LEU 157 1 Y 1 A SER 734 A SER 158 1 Y 1 A PRO 735 A PRO 159 1 Y 1 A GLY 736 A GLY 160 1 Y 1 A GLN 737 A GLN 161 1 Y 1 A ASP 738 A ASP 162 1 Y 1 A PRO 739 A PRO 163 1 Y 1 A GLU 740 A GLU 164 1 Y 1 A GLY 741 A GLY 165 1 Y 1 A LEU 742 A LEU 166 1 Y 1 A ASP 743 A ASP 167 1 Y 1 A LYS 744 A LYS 168 1 Y 1 A GLU 745 A GLU 169 1 Y 1 A ASP 746 A ASP 170 1 Y 1 A GLN 915 A GLN 339 1 Y 1 A GLU 916 A GLU 340 1 Y 1 A ASP 917 A ASP 341 1 Y 1 A ARG 918 A ARG 342 1 Y 1 A ARG 919 A ARG 343 1 Y 1 A PRO 685 -39.21 -37.58 1 A ASP 778 -156.21 49.06 10.2841 0.0000 -0.0000 10.2841 -0.0000 -20.5683 0.267 0.220 0.222 0.222 2.9001 51.9 414 8769 8714 4.75 99.38 0.52 RANDOM 1 1.36 MOLECULAR REPLACEMENT 26.97 0.90 1.11 ML FLAT BULK SOLVENT MODEL 40.606 0.357 2.9001 51.9 0 2292 30 0 2262 0.005 2349 0.891 3183 14.038 847 0.057 345 0.005 404 0.3885 0.2994 3.3196 137 2690 99.00 0.2793 0.2191 4.1821 135 2728 100.00 0.2193 0.1930 51.8579 142 2882 99.00 2.90 59.5 4HW7 8769 8735 -3.0 -3.0 1 99.6 2.90 3.06 1 99.8 data collection Blu-Ice phasing MOLREP refinement PHENIX (phenix.refine: 1.7.3_928) data reduction MOSFLM data scaling SCALA Crystal structure of FMS kinase domain with a small molecular inhibitor, PLX647-OME 1 N N 2 N N A ASN 572 A ASN 42 HELX_P A GLU 576 A GLU 46 5 1 5 A PRO 578 A PRO 48 HELX_P A ASN 580 A ASN 50 5 2 3 A HIS 623 A HIS 93 HELX_P A GLY 641 A GLY 111 1 3 19 A ASP 670 A ASP 140 HELX_P A GLY 684 A GLY 154 1 4 15 A GLU 751 A GLU 175 HELX_P A LYS 772 A LYS 196 1 5 22 A ALA 780 A ALA 204 HELX_P A ARG 782 A ARG 206 5 6 3 A ASN 788 A ASN 212 HELX_P A HIS 790 A HIS 214 5 7 3 A PHE 797 A PHE 221 HELX_P A ARG 801 A ARG 225 5 8 5 A PRO 818 A PRO 242 HELX_P A MET 822 A MET 246 5 9 5 A ALA 823 A ALA 247 HELX_P A ASP 829 A ASP 253 1 10 7 A THR 833 A THR 257 HELX_P A SER 850 A SER 274 1 11 18 A ASN 862 A ASN 286 HELX_P A ASP 871 A ASP 295 1 12 10 A PRO 882 A PRO 306 HELX_P A TRP 893 A TRP 317 1 13 12 A GLU 896 A GLU 320 HELX_P A ARG 900 A ARG 324 5 14 5 A THR 902 A THR 326 HELX_P A ALA 914 A ALA 338 1 15 13 TRANSFERASE/TRANSFERASE INHIBITOR CSF-1-R, FMS PROTO-ONCOGENE, C-FMS, CD115 antigen, Kinase, ATP-binding, TRANSFERASE-TRANSFERASE INHIBITOR complex CSF1R_HUMAN UNP 1 542 P07333 QKPKYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLSPGQDPEGGVDYKN IHLEKKYVRRDSGFSSQGVDTYVEMRPVSTSSNDSFSEQDLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAA RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 542 919 4HW7 542 919 P07333 A 1 12 343 1 expression tag MET 531 4HW7 A P07333 UNP 1 1 expression tag LYS 532 4HW7 A P07333 UNP 2 1 expression tag LYS 533 4HW7 A P07333 UNP 3 1 expression tag GLY 534 4HW7 A P07333 UNP 4 1 expression tag HIS 535 4HW7 A P07333 UNP 5 1 expression tag HIS 536 4HW7 A P07333 UNP 6 1 expression tag HIS 537 4HW7 A P07333 UNP 7 1 expression tag HIS 538 4HW7 A P07333 UNP 8 1 expression tag HIS 539 4HW7 A P07333 UNP 9 1 expression tag HIS 540 4HW7 A P07333 UNP 10 1 expression tag GLY 541 4HW7 A P07333 UNP 11 1 CYS engineered mutation THR 667 4HW7 A P07333 UNP 667 137 1 GLY deletion 4HW7 A P07333 UNP 696 1 VAL deletion 4HW7 A P07333 UNP 697 1 ASP deletion 4HW7 A P07333 UNP 698 1 TYR deletion 4HW7 A P07333 UNP 699 1 LYS deletion 4HW7 A P07333 UNP 700 1 ASN deletion 4HW7 A P07333 UNP 701 1 ILE deletion 4HW7 A P07333 UNP 702 1 HIS deletion 4HW7 A P07333 UNP 703 1 LEU deletion 4HW7 A P07333 UNP 704 1 GLU deletion 4HW7 A P07333 UNP 705 1 LYS deletion 4HW7 A P07333 UNP 706 1 LYS deletion 4HW7 A P07333 UNP 707 1 TYR deletion 4HW7 A P07333 UNP 708 1 VAL deletion 4HW7 A P07333 UNP 709 1 ARG deletion 4HW7 A P07333 UNP 710 1 ARG deletion 4HW7 A P07333 UNP 711 1 ASP deletion 4HW7 A P07333 UNP 712 1 SER deletion 4HW7 A P07333 UNP 713 1 GLY deletion 4HW7 A P07333 UNP 714 1 PHE deletion 4HW7 A P07333 UNP 715 1 SER deletion 4HW7 A P07333 UNP 716 1 SER deletion 4HW7 A P07333 UNP 717 1 GLN deletion 4HW7 A P07333 UNP 718 1 GLY deletion 4HW7 A P07333 UNP 719 1 VAL deletion 4HW7 A P07333 UNP 720 1 ASP deletion 4HW7 A P07333 UNP 721 1 THR deletion 4HW7 A P07333 UNP 722 1 TYR deletion 4HW7 A P07333 UNP 723 1 VAL deletion 4HW7 A P07333 UNP 724 1 GLU deletion 4HW7 A P07333 UNP 725 1 MET deletion 4HW7 A P07333 UNP 726 1 ARG deletion 4HW7 A P07333 UNP 727 1 PRO deletion 4HW7 A P07333 UNP 728 1 VAL deletion 4HW7 A P07333 UNP 729 1 SER deletion 4HW7 A P07333 UNP 730 1 THR deletion 4HW7 A P07333 UNP 731 1 SER deletion 4HW7 A P07333 UNP 732 1 SER deletion 4HW7 A P07333 UNP 733 1 ASN deletion 4HW7 A P07333 UNP 734 1 ASP deletion 4HW7 A P07333 UNP 735 1 SER deletion 4HW7 A P07333 UNP 736 1 PHE deletion 4HW7 A P07333 UNP 737 1 SER deletion 4HW7 A P07333 UNP 738 1 GLU deletion 4HW7 A P07333 UNP 739 1 GLN deletion 4HW7 A P07333 UNP 740 1 ASP deletion 4HW7 A P07333 UNP 741 1 CYS engineered mutation SER 830 4HW7 A P07333 UNP 830 254 1 CYS engineered mutation THR 907 4HW7 A P07333 UNP 907 331 5 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 582 A LEU 52 A ALA 590 A ALA 60 A GLY 594 A GLY 64 A LEU 604 A LEU 74 A ALA 609 A ALA 79 A LEU 618 A LEU 88 A LEU 660 A LEU 130 A GLU 664 A GLU 134 A LEU 649 A LEU 119 A CYS 653 A CYS 123 A VAL 784 A VAL 208 A LEU 786 A LEU 210 A ALA 792 A ALA 216 A ILE 794 A ILE 218 A ILE 810 A ILE 234 A LYS 812 A LYS 236 A ALA 815 A ALA 239 A LEU 817 A LEU 241 BINDING SITE FOR RESIDUE 64M A 1001 A 64M 1001 Software 14 A ALA 614 A ALA 84 14 1_555 A LYS 616 A LYS 86 14 1_555 A GLU 633 A GLU 103 14 1_555 A LEU 640 A LEU 110 14 1_555 A VAL 647 A VAL 117 14 1_555 A THR 663 A THR 133 14 1_555 A GLU 664 A GLU 134 14 1_555 A TYR 665 A TYR 135 14 1_555 A CYS 666 A CYS 136 14 1_555 A LEU 785 A LEU 209 14 1_555 A ILE 794 A ILE 218 14 1_555 A GLY 795 A GLY 219 14 1_555 A ASP 796 A ASP 220 14 1_555 A PHE 797 A PHE 221 14 1_555 96 P 43 21 2