0.014077 0.008127 0.000000 0.000000 0.016254 0.000000 0.000000 0.000000 0.019084 0.00000 0.00000 0.00000 Trillo-Muyo, S. Martinez-Rodriguez, S. Arolas, J.L. Gomis-Ruth, F.X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 71.040 71.040 52.400 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK CHEM SCI 2041-6520 4 791 797 10.1039/C2SC21712K Mechanism of action of a Janus-faced single-domain protein inhibitor simultaneously targeting two peptidase classes 2013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2009-10-06 MARMOSAIC 225 mm CCD Si(311) SINGLE WAVELENGTH M x-ray 1 0.8726 1.0 ID23-2 ESRF 0.8726 SYNCHROTRON ESRF BEAMLINE ID23-2 11923.354 Neutral proteinase inhibitor ScNPI 1 man polymer 92.094 GLYCEROL 1 syn non-polymer 59.044 ACETATE ION 3 syn non-polymer 18.015 water 126 nat water Sermetstatin no no GSAHGPSAMVFTVIQGSGEPTDTVLRATTLSCAYTAEGTHPAPRAACDALNATDGELNRLLAAPDPSLVCPMYFDPVTVT ADGVLNGRRVAWKHTFSNTCVMSANLNSNPVYAF GSAHGPSAMVFTVIQGSGEPTDTVLRATTLSCAYTAEGTHPAPRAACDALNATDGELNRLLAAPDPSLVCPMYFDPVTVT ADGVLNGRRVAWKHTFSNTCVMSANLNSNPVYAF A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample ScNPI 53502 Streptomyces caespitosus 562 Escherichia coli Origami pET pET32a 1 3.20 61.58 VAPOR DIFFUSION, SITTING DROP 5.6 0.1 M sodium citrate dihydrate, 0.2 M ammonium acetate, 10% (w/v) PEG3350, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 software repository Initial release Database references Refinement description 1 0 2012-12-05 1 1 2013-02-20 1 2 2017-11-15 _software.name RCSB Y RCSB 2012-11-09 REL REL GOL GLYCEROL ACT ACETATE ION HOH water GOL 501 2 GOL GOL 501 A ACT 502 3 ACT ACT 502 A ACT 503 3 ACT ACT 503 A ACT 504 3 ACT ACT 504 A HOH 505 4 HOH HOH 601 A HOH 506 4 HOH HOH 602 A HOH 507 4 HOH HOH 603 A HOH 508 4 HOH HOH 604 A HOH 509 4 HOH HOH 605 A HOH 510 4 HOH HOH 606 A HOH 511 4 HOH HOH 607 A HOH 512 4 HOH HOH 608 A HOH 513 4 HOH HOH 609 A HOH 514 4 HOH HOH 610 A HOH 515 4 HOH HOH 611 A HOH 516 4 HOH HOH 612 A HOH 517 4 HOH HOH 613 A HOH 518 4 HOH HOH 614 A HOH 519 4 HOH HOH 615 A HOH 520 4 HOH HOH 616 A HOH 521 4 HOH HOH 617 A HOH 522 4 HOH HOH 618 A HOH 523 4 HOH HOH 619 A HOH 524 4 HOH HOH 620 A HOH 525 4 HOH HOH 621 A HOH 526 4 HOH HOH 622 A HOH 527 4 HOH HOH 623 A HOH 528 4 HOH HOH 624 A HOH 529 4 HOH HOH 625 A HOH 530 4 HOH HOH 626 A HOH 531 4 HOH HOH 627 A HOH 532 4 HOH HOH 628 A HOH 533 4 HOH HOH 629 A HOH 534 4 HOH HOH 630 A HOH 535 4 HOH HOH 631 A HOH 536 4 HOH HOH 632 A HOH 537 4 HOH HOH 633 A HOH 538 4 HOH HOH 634 A HOH 539 4 HOH HOH 635 A HOH 540 4 HOH HOH 636 A HOH 541 4 HOH HOH 637 A HOH 542 4 HOH HOH 638 A HOH 543 4 HOH HOH 639 A HOH 544 4 HOH HOH 640 A HOH 545 4 HOH HOH 641 A HOH 546 4 HOH HOH 642 A HOH 547 4 HOH HOH 643 A HOH 548 4 HOH HOH 644 A HOH 549 4 HOH HOH 645 A HOH 550 4 HOH HOH 646 A HOH 551 4 HOH HOH 647 A HOH 552 4 HOH HOH 648 A HOH 553 4 HOH HOH 649 A HOH 554 4 HOH HOH 650 A HOH 555 4 HOH HOH 651 A HOH 556 4 HOH HOH 652 A HOH 557 4 HOH HOH 653 A HOH 558 4 HOH HOH 654 A HOH 559 4 HOH HOH 655 A HOH 560 4 HOH HOH 656 A HOH 561 4 HOH HOH 657 A HOH 562 4 HOH HOH 658 A HOH 563 4 HOH HOH 659 A HOH 564 4 HOH HOH 660 A HOH 565 4 HOH HOH 661 A HOH 566 4 HOH HOH 662 A HOH 567 4 HOH HOH 663 A HOH 568 4 HOH HOH 664 A HOH 569 4 HOH HOH 665 A HOH 570 4 HOH HOH 666 A HOH 571 4 HOH HOH 667 A HOH 572 4 HOH HOH 668 A HOH 573 4 HOH HOH 669 A HOH 574 4 HOH HOH 670 A HOH 575 4 HOH HOH 671 A HOH 576 4 HOH HOH 672 A HOH 577 4 HOH HOH 673 A HOH 578 4 HOH HOH 674 A HOH 579 4 HOH HOH 675 A HOH 580 4 HOH HOH 676 A HOH 581 4 HOH HOH 677 A HOH 582 4 HOH HOH 678 A HOH 583 4 HOH HOH 679 A HOH 584 4 HOH HOH 680 A HOH 585 4 HOH HOH 681 A HOH 586 4 HOH HOH 682 A HOH 587 4 HOH HOH 683 A HOH 588 4 HOH HOH 684 A HOH 589 4 HOH HOH 685 A HOH 590 4 HOH HOH 686 A HOH 591 4 HOH HOH 687 A HOH 592 4 HOH HOH 688 A HOH 593 4 HOH HOH 689 A HOH 594 4 HOH HOH 690 A HOH 595 4 HOH HOH 691 A HOH 596 4 HOH HOH 692 A HOH 597 4 HOH HOH 693 A HOH 598 4 HOH HOH 694 A HOH 599 4 HOH HOH 695 A HOH 600 4 HOH HOH 696 A HOH 601 4 HOH HOH 697 A HOH 602 4 HOH HOH 698 A HOH 603 4 HOH HOH 699 A HOH 604 4 HOH HOH 700 A HOH 605 4 HOH HOH 701 A HOH 606 4 HOH HOH 702 A HOH 607 4 HOH HOH 703 A HOH 608 4 HOH HOH 704 A HOH 609 4 HOH HOH 705 A HOH 610 4 HOH HOH 706 A HOH 611 4 HOH HOH 707 A HOH 612 4 HOH HOH 708 A HOH 613 4 HOH HOH 709 A HOH 614 4 HOH HOH 710 A HOH 615 4 HOH HOH 711 A HOH 616 4 HOH HOH 712 A HOH 617 4 HOH HOH 713 A HOH 618 4 HOH HOH 714 A HOH 619 4 HOH HOH 715 A HOH 620 4 HOH HOH 716 A HOH 621 4 HOH HOH 717 A HOH 622 4 HOH HOH 718 A HOH 623 4 HOH HOH 719 A HOH 624 4 HOH HOH 720 A HOH 625 4 HOH HOH 721 A HOH 626 4 HOH HOH 722 A HOH 627 4 HOH HOH 723 A HOH 628 4 HOH HOH 724 A HOH 629 4 HOH HOH 725 A HOH 630 4 HOH HOH 726 A GLY -1 n 1 GLY -1 A SER 1 n 2 SER 1 A ALA 2 n 3 ALA 2 A HIS 3 n 4 HIS 3 A GLY 4 n 5 GLY 4 A PRO 5 n 6 PRO 5 A SER 6 n 7 SER 6 A ALA 7 n 8 ALA 7 A MET 8 n 9 MET 8 A VAL 9 n 10 VAL 9 A PHE 10 n 11 PHE 10 A THR 11 n 12 THR 11 A VAL 12 n 13 VAL 12 A ILE 13 n 14 ILE 13 A GLN 14 n 15 GLN 14 A GLY 15 n 16 GLY 15 A SER 16 n 17 SER 16 A GLY 17 n 18 GLY 17 A GLU 18 n 19 GLU 18 A PRO 19 n 20 PRO 19 A THR 20 n 21 THR 20 A ASP 21 n 22 ASP 21 A THR 22 n 23 THR 22 A VAL 23 n 24 VAL 23 A LEU 24 n 25 LEU 24 A ARG 25 n 26 ARG 25 A ALA 26 n 27 ALA 26 A THR 27 n 28 THR 27 A THR 28 n 29 THR 28 A LEU 29 n 30 LEU 29 A SER 30 n 31 SER 30 A CYS 31 n 32 CYS 31 A ALA 32 n 33 ALA 32 A TYR 33 n 34 TYR 33 A THR 34 n 35 THR 34 A ALA 35 n 36 ALA 35 A GLU 36 n 37 GLU 36 A GLY 37 n 38 GLY 37 A THR 38 n 39 THR 38 A HIS 39 n 40 HIS 39 A PRO 40 n 41 PRO 40 A ALA 41 n 42 ALA 41 A PRO 42 n 43 PRO 42 A ARG 43 n 44 ARG 43 A ALA 44 n 45 ALA 44 A ALA 45 n 46 ALA 45 A CYS 46 n 47 CYS 46 A ASP 47 n 48 ASP 47 A ALA 48 n 49 ALA 48 A LEU 49 n 50 LEU 49 A ASN 50 n 51 ASN 50 A ALA 51 n 52 ALA 51 A THR 52 n 53 THR 52 A ASP 53 n 54 ASP 53 A GLY 54 n 55 GLY 54 A GLU 55 n 56 GLU 55 A LEU 56 n 57 LEU 56 A ASN 57 n 58 ASN 57 A ARG 58 n 59 ARG 58 A LEU 59 n 60 LEU 59 A LEU 60 n 61 LEU 60 A ALA 61 n 62 ALA 61 A ALA 62 n 63 ALA 62 A PRO 63 n 64 PRO 63 A ASP 64 n 65 ASP 64 A PRO 65 n 66 PRO 65 A SER 66 n 67 SER 66 A LEU 67 n 68 LEU 67 A VAL 68 n 69 VAL 68 A CYS 69 n 70 CYS 69 A PRO 70 n 71 PRO 70 A MET 71 n 72 MET 71 A TYR 72 n 73 TYR 72 A PHE 73 n 74 PHE 73 A ASP 74 n 75 ASP 74 A PRO 75 n 76 PRO 75 A VAL 76 n 77 VAL 76 A THR 77 n 78 THR 77 A VAL 78 n 79 VAL 78 A THR 79 n 80 THR 79 A ALA 80 n 81 ALA 80 A ASP 81 n 82 ASP 81 A GLY 82 n 83 GLY 82 A VAL 83 n 84 VAL 83 A LEU 84 n 85 LEU 84 A ASN 85 n 86 ASN 85 A GLY 86 n 87 GLY 86 A ARG 87 n 88 ARG 87 A ARG 88 n 89 ARG 88 A VAL 89 n 90 VAL 89 A ALA 90 n 91 ALA 90 A TRP 91 n 92 TRP 91 A LYS 92 n 93 LYS 92 A HIS 93 n 94 HIS 93 A THR 94 n 95 THR 94 A PHE 95 n 96 PHE 95 A SER 96 n 97 SER 96 A ASN 97 n 98 ASN 97 A THR 98 n 99 THR 98 A CYS 99 n 100 CYS 99 A VAL 100 n 101 VAL 100 A MET 101 n 102 MET 101 A SER 102 n 103 SER 102 A ALA 103 n 104 ALA 103 A ASN 104 n 105 ASN 104 A LEU 105 n 106 LEU 105 A ASN 106 n 107 ASN 106 A SER 107 n 108 SER 107 A ASN 108 n 109 ASN 108 A PRO 109 n 110 PRO 109 A VAL 110 n 111 VAL 110 A TYR 111 n 112 TYR 111 A ALA 112 n 113 ALA 112 A PHE 113 n 114 PHE 113 A 3.4644 -0.1265 -0.9308 0.0427 0.2121 1.6503 0.1742 0.1376 -0.1384 0.0224 -0.1414 -0.0492 -0.0078 -0.2086 -0.0328 0.0461 -0.0491 -0.0347 0.0134 0.0018 -0.0396 refined -3.4193 25.3953 2.1786 X-RAY DIFFRACTION A -1 A 113 X-RAY DIFFRACTION 1 { A|* } author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 2 dimeric 2970 -17 11790 2310 -18 12440 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_555 -x,-x+y,-z+1/3 crystal symmetry operation 0.0000000000 0.0000000000 17.4666666667 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O GLU 36 A O GLU 37 A N SER 30 A N SER 31 A O LEU 29 A O LEU 30 A N MET 8 A N MET 9 A N ILE 13 A N ILE 14 A O THR 77 A O THR 78 A N VAL 76 A N VAL 77 A O PHE 95 A O PHE 96 1 A ALA 32 -158.10 -137.28 1 A ASN 106 55.30 -120.78 1 A SER 107 -140.54 28.41 42.28 -5.4007 0.0000 0.0000 -5.4007 0.0000 10.8015 0.9437 0.9258 0.2140 0.187 0.187 0.1883 1.90 39.89 479 12232 12232 3.92 99.00 0.122 RANDOM 1 THROUGHOUT 0.0 SAD Engh & Huber 0.273 1.90 39.89 126 978 18 0 834 0.010 870 HARMONIC 2.00 1.14 1191 HARMONIC 2.00 371 SINUSOIDAL 2.00 21 HARMONIC 2.00 131 HARMONIC 5.00 870 HARMONIC 20.00 6 SEMIHARMONIC 5.00 4.01 2.51 119 SEMIHARMONIC 5.00 974 SEMIHARMONIC 4.00 0.2207 0.2167 0.2168 2.08 479 2762 2869 12234 6 3.73 99.00 34.43 1.90 39.9 4HWX 12234 12234 0 0 0.038 1 40.3 99.3 data collection ProDC model building SHELX & PHASER refinement BUSTER 2.11.2 data reduction XDS data scaling SCALA phasing SHELX & PHASER Neutral proteinase inhibitor ScNPI Crystal structure of Streptomyces caespitosus sermetstatin 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N A ALA 41 A ALA 42 HELX_P A THR 52 A THR 53 1 1 12 A GLU 55 A GLU 56 HELX_P A LEU 60 A LEU 61 5 2 6 A ASN 97 A ASN 98 HELX_P A LEU 105 A LEU 106 1 3 9 A ASN 108 A ASN 109 HELX_P A ALA 112 A ALA 113 5 4 5 disulf 2.034 A CYS 31 A SG CYS 32 1_555 A CYS 46 A SG CYS 47 1_555 disulf 2.050 A CYS 69 A SG CYS 70 1_555 A CYS 99 A SG CYS 100 1_555 Hydrolase Inhibitor Streptomyces subtilisin inhibitor fold, Hydrolase Inhibitor Q9FDS0_STRCS UNP 1 29 Q9FDS0 SAHGPSAMVFTVIQGSGEPTDTVLRATTLSCAYTAEGTHPAPRAACDALNATDGELNRLLAAPDPSLVCPMYFDPVTVTA DGVLNGRRVAWKHTFSNTCVMSANLNSNPVYAF 29 141 4HWX 1 113 Q9FDS0 A 1 2 114 1 EXPRESSION TAG GLY -1 4HWX A Q9FDS0 UNP 1 5 anti-parallel anti-parallel anti-parallel anti-parallel A ALA 35 A ALA 36 A GLU 36 A GLU 37 A THR 22 A THR 23 A CYS 31 A CYS 32 A ALA 7 A ALA 8 A GLN 14 A GLN 15 A VAL 76 A VAL 77 A LEU 84 A LEU 85 A ARG 87 A ARG 88 A PHE 95 A PHE 96 BINDING SITE FOR RESIDUE GOL A 501 Software 8 BINDING SITE FOR RESIDUE ACT A 502 Software 5 BINDING SITE FOR RESIDUE ACT A 503 Software 3 BINDING SITE FOR RESIDUE ACT A 504 Software 4 A CYS 31 A CYS 32 8 1_555 A ALA 32 A ALA 33 8 1_555 A ARG 43 A ARG 44 8 1_555 A CYS 46 A CYS 47 8 1_555 A ASN 50 A ASN 51 8 1_555 A HOH 618 F HOH 8 1_555 A HOH 669 F HOH 8 1_555 A HOH 670 F HOH 8 1_555 A ALA 2 A ALA 3 5 1_555 A HIS 3 A HIS 4 5 1_555 A SER 66 A SER 67 5 5_564 A HOH 669 F HOH 5 1_555 A HOH 688 F HOH 5 1_555 A ASP 81 A ASP 82 3 1_555 A ARG 88 A ARG 89 3 6_555 A TRP 91 A TRP 92 3 1_555 A LEU 60 A LEU 61 4 1_555 A HIS 93 A HIS 94 4 1_555 A PHE 95 A PHE 96 4 1_555 A HOH 615 F HOH 4 1_555 152 P 31 2 1