0.007974 0.000000 0.000000 0.000000 0.007974 0.000000 0.000000 0.000000 0.018328 0.00000 0.00000 0.00000 Redecke, L. Nass, K. DePonte, D.P. White, T.A. Rehders, D. Barty, A. Stellato, F. Liang, M. Barends, T.R.M. Boutet, S. Williams, G.W. Messerschmidt, M. Seibert, M.M. Aquila, A. Arnlund, D. Bajt, S. Barth, T. Bogan, M.J. Caleman, C. Chao, T.-C. Doak, R.B. Fleckenstein, H. Frank, M. Fromme, R. Galli, L. Grotjohann, I. Hunter, M.S. Johansson, L.C. Kassemeyer, S. Katona, G. Kirian, R.A. Koopmann, R. Kupitz, C. Lomb, L. Martin, A.V. Mogk, S. Neutze, R. Shoemann, R.L. Steinbrener, J. Timneanu, N. Wang, D. Weierstall, U. Zatsepin, N.A. Spence, J.C.H. Fromme, P. Schlichting, I. Duszenko, M. Betzel, C. Chapman, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 125.400 125.400 54.560 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H12 O6 180.156 beta-D-mannopyranose beta-D-mannose; D-mannose; mannose D-saccharide, beta linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 R C N 75 S C N 76 S C N 77 S C N 78 R C N 79 N C N 80 N O N 81 N O N 82 N O N 83 N O N 84 N O N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 R C N 100 N C N 101 N O N 102 N C N 103 N S N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 S C N 114 N C N 115 N O N 116 N C N 117 N C N 118 N C N 119 N O N 120 N N N 121 N O N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N N N 133 S C N 134 N C N 135 N O N 136 N C N 137 N C N 138 N C N 139 N O N 140 N O N 141 N O N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 N C N 153 N C N 154 N O N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 N C Y 166 N C Y 167 N N Y 168 N C Y 169 N C Y 170 N N N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N O N 183 N H N 184 N H N 185 N N N 186 S C N 187 N C N 188 N O N 189 S C N 190 N C N 191 N C N 192 N C N 193 N O N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 N C N 212 N C N 213 N C N 214 N C N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N N N 230 S C N 231 N C N 232 N O N 233 N C N 234 N C N 235 N C N 236 N C N 237 N N N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N S N 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 R C N 275 R C N 276 R C N 277 S C N 278 R C N 279 N C N 280 N C N 281 N C N 282 N N N 283 N O N 284 N O N 285 N O N 286 N O N 287 N O N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C Y 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C N 349 N O N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 R C N 363 N O N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N N Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C N 413 N O N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C N 431 N C N 432 N C N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing Y 164 N sing Y 165 N doub Y 166 N doub N 167 N sing Y 168 N sing N 169 N sing Y 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub N 307 N sing Y 308 N doub N 309 N sing Y 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing Y 371 N doub Y 372 N sing Y 373 N sing N 374 N sing Y 375 N doub Y 376 N sing Y 377 N sing N 378 N sing Y 379 N sing Y 380 N doub N 381 N sing Y 382 N doub N 383 N sing Y 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing Y 399 N doub Y 400 N sing Y 401 N sing N 402 N sing Y 403 N doub N 404 N sing Y 405 N doub N 406 N sing Y 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing US Science SCIEAS 0038 0036-8075 339 227 230 10.1126/science.1229663 23196907 Natively inhibited Trypanosoma brucei cathepsin B structure determined by using an X-ray laser. 2013 10.2210/pdb4hwy/pdb pdb_00004hwy 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 PIXEL 2011-02-01 Cornell-SLAC Pixel Array Detector CXI SINGLE WAVELENGTH M x-ray 1 1.32 1.0 CXI SLAC LCLS 1.32 FREE ELECTRON LASER SLAC LCLS BEAMLINE CXI 37259.688 Cysteine peptidase C (CPC) 3.4.22.- 1 man polymer 586.542 beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 18.015 water 98 nat water no no MHLMRACITFCIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASIL PKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGD GCNGGDPDRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS SECGIEDGGSAGIPLAPNTA MHLMRACITFCIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASIL PKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGD GCNGGDPDRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS SECGIEDGGSAGIPLAPNTA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Trypanosoma brucei brucei strain 927/4 GUTat10.1 sample Tb927.6.560 185431 Trypanosoma brucei brucei TREU927 7108 Spodoptera frugiperda SF9 Virus pFastBac1 293195 2.88 57.27 Crystallization in vivo within living SF9 insect cells 7.4 Spontaneous formation of needle-shaped microcrystals in Sf9 cells infected with recombinant baculovirus containing the gene encoding the pre-pro form of Trypanosoma brucei cathepsin B, pH 7.4, Crystallization in vivo within living SF9 insect cells, temperature 310.15K 310.15 diffrn_source pdbx_unobs_or_zero_occ_atoms diffrn_source entity_src_gen atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_struct_special_symmetry struct_asym struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_unobs_or_zero_occ_atoms repository Initial release Carbohydrate remediation repository Remediation Database references Database references Data collection Advisory Data collection Data collection Source and taxonomy Atomic model Data collection Derived calculations Structure summary Advisory Data collection Database references Refinement description Structure summary 1 0 2012-12-05 1 1 2012-12-19 1 2 2013-01-23 1 3 2016-12-21 1 4 2017-11-15 1 5 2018-02-14 2 0 2020-07-29 2 1 2023-09-20 _diffrn_source.type _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_strain _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_scientific_name _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_entity_id _atom_site.occupancy _atom_site.type_symbol _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_special_symmetry.label_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.pdbx_value_order _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession A NAG 401 n B NAG 1 A NAG 402 n B NAG 2 A MAN 403 n B BMA 3 A NAG 404 n C NAG 1 A NAG 405 n C NAG 2 DManpb b-D-mannopyranose b-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y RCSB 2012-11-09 REL REL oligosaccharide oligosaccharide DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}} 2 PDB-CARE LINUCS DGlcpNAcb1-4DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 3 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 BMA NAG 3 2 2 O1 HO4 sing C1 O4 NAG NAG 2 1 3 O1 HO4 sing n n n n n HOH water 3MOR PDB entry 3MOR PDB experimental model HOH 501 4 HOH HOH 501 A HOH 502 4 HOH HOH 502 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 510 4 HOH HOH 510 A HOH 511 4 HOH HOH 511 A HOH 512 4 HOH HOH 512 A HOH 513 4 HOH HOH 513 A HOH 514 4 HOH HOH 514 A HOH 515 4 HOH HOH 515 A HOH 516 4 HOH HOH 516 A HOH 517 4 HOH HOH 517 A HOH 518 4 HOH HOH 518 A HOH 519 4 HOH HOH 519 A HOH 520 4 HOH HOH 520 A HOH 521 4 HOH HOH 521 A HOH 522 4 HOH HOH 522 A HOH 523 4 HOH HOH 523 A HOH 524 4 HOH HOH 524 A HOH 525 4 HOH HOH 525 A HOH 526 4 HOH HOH 526 A HOH 527 4 HOH HOH 527 A HOH 528 4 HOH HOH 528 A HOH 529 4 HOH HOH 529 A HOH 530 4 HOH HOH 530 A HOH 531 4 HOH HOH 531 A HOH 532 4 HOH HOH 532 A HOH 533 4 HOH HOH 533 A HOH 534 4 HOH HOH 534 A HOH 535 4 HOH HOH 535 A HOH 536 4 HOH HOH 536 A HOH 537 4 HOH HOH 537 A HOH 538 4 HOH HOH 538 A HOH 539 4 HOH HOH 539 A HOH 540 4 HOH HOH 540 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 544 4 HOH HOH 544 A HOH 545 4 HOH HOH 545 A HOH 546 4 HOH HOH 546 A HOH 547 4 HOH HOH 547 A HOH 548 4 HOH HOH 548 A HOH 549 4 HOH HOH 549 A HOH 550 4 HOH HOH 550 A HOH 551 4 HOH HOH 551 A HOH 552 4 HOH HOH 552 A HOH 553 4 HOH HOH 553 A HOH 554 4 HOH HOH 554 A HOH 555 4 HOH HOH 555 A HOH 556 4 HOH HOH 556 A HOH 557 4 HOH HOH 557 A HOH 558 4 HOH HOH 558 A HOH 559 4 HOH HOH 559 A HOH 560 4 HOH HOH 560 A HOH 561 4 HOH HOH 561 A HOH 562 4 HOH HOH 562 A HOH 563 4 HOH HOH 563 A HOH 564 4 HOH HOH 564 A HOH 565 4 HOH HOH 565 A HOH 566 4 HOH HOH 566 A HOH 567 4 HOH HOH 567 A HOH 568 4 HOH HOH 568 A HOH 569 4 HOH HOH 569 A HOH 570 4 HOH HOH 570 A HOH 571 4 HOH HOH 571 A HOH 572 4 HOH HOH 572 A HOH 573 4 HOH HOH 573 A HOH 574 4 HOH HOH 574 A HOH 575 4 HOH HOH 575 A HOH 576 4 HOH HOH 576 A HOH 577 4 HOH HOH 577 A HOH 578 4 HOH HOH 578 A HOH 579 4 HOH HOH 579 A HOH 580 4 HOH HOH 580 A HOH 581 4 HOH HOH 581 A HOH 582 4 HOH HOH 582 A HOH 583 4 HOH HOH 583 A HOH 584 4 HOH HOH 584 A HOH 585 4 HOH HOH 585 A HOH 586 4 HOH HOH 586 A HOH 587 4 HOH HOH 587 A HOH 588 4 HOH HOH 588 A HOH 589 4 HOH HOH 589 A HOH 590 4 HOH HOH 590 A HOH 591 4 HOH HOH 591 A HOH 592 4 HOH HOH 592 A HOH 593 4 HOH HOH 593 A HOH 594 4 HOH HOH 594 A HOH 595 4 HOH HOH 595 A HOH 596 4 HOH HOH 596 A HOH 597 4 HOH HOH 597 A HOH 598 4 HOH HOH 598 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A n 11 11 A n 12 12 A n 13 13 A n 14 14 A n 15 15 A n 16 16 A n 17 17 A n 18 18 A n 19 19 A n 20 20 A n 21 21 A n 22 22 A n 23 23 A n 24 24 A n 25 25 A n 26 26 A GLU 27 n 27 GLU 27 A ASP 28 n 28 ASP 28 A ALA 29 n 29 ALA 29 A PRO 30 n 30 PRO 30 A VAL 31 n 31 VAL 31 A LEU 32 n 32 LEU 32 A SER 33 n 33 SER 33 A LYS 34 n 34 LYS 34 A ALA 35 n 35 ALA 35 A PHE 36 n 36 PHE 36 A VAL 37 n 37 VAL 37 A ASP 38 n 38 ASP 38 A ARG 39 n 39 ARG 39 A VAL 40 n 40 VAL 40 A ASN 41 n 41 ASN 41 A ARG 42 n 42 ARG 42 A LEU 43 n 43 LEU 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A GLY 46 n 46 GLY 46 A ILE 47 n 47 ILE 47 A TRP 48 n 48 TRP 48 A LYS 49 n 49 LYS 49 A ALA 50 n 50 ALA 50 A LYS 51 n 51 LYS 51 A TYR 52 n 52 TYR 52 A ASP 53 n 53 ASP 53 A GLY 54 n 54 GLY 54 A VAL 55 n 55 VAL 55 A MET 56 n 56 MET 56 A GLN 57 n 57 GLN 57 A ASN 58 n 58 ASN 58 A ILE 59 n 59 ILE 59 A THR 60 n 60 THR 60 A LEU 61 n 61 LEU 61 A ARG 62 n 62 ARG 62 A GLU 63 n 63 GLU 63 A ALA 64 n 64 ALA 64 A LYS 65 n 65 LYS 65 A ARG 66 n 66 ARG 66 A LEU 67 n 67 LEU 67 A ASN 68 n 68 ASN 68 A GLY 69 n 69 GLY 69 A VAL 70 n 70 VAL 70 A ILE 71 n 71 ILE 71 A LYS 72 n 72 LYS 72 A n 73 73 A n 74 74 A n 75 75 A n 76 76 A n 77 77 A n 78 78 A ILE 79 n 79 ILE 79 A LEU 80 n 80 LEU 80 A PRO 81 n 81 PRO 81 A LYS 82 n 82 LYS 82 A ARG 83 n 83 ARG 83 A ARG 84 n 84 ARG 84 A PHE 85 n 85 PHE 85 A THR 86 n 86 THR 86 A GLU 87 n 87 GLU 87 A GLU 88 n 88 GLU 88 A GLU 89 n 89 GLU 89 A ALA 90 n 90 ALA 90 A ARG 91 n 91 ARG 91 A ALA 92 n 92 ALA 92 A PRO 93 n 93 PRO 93 A LEU 94 n 94 LEU 94 A PRO 95 n 95 PRO 95 A SER 96 n 96 SER 96 A SER 97 n 97 SER 97 A PHE 98 n 98 PHE 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A ALA 101 n 101 ALA 101 A GLU 102 n 102 GLU 102 A ALA 103 n 103 ALA 103 A TRP 104 n 104 TRP 104 A PRO 105 n 105 PRO 105 A ASN 106 n 106 ASN 106 A CYS 107 n 107 CYS 107 A PRO 108 n 108 PRO 108 A THR 109 n 109 THR 109 A ILE 110 n 110 ILE 110 A PRO 111 n 111 PRO 111 A GLN 112 n 112 GLN 112 A ILE 113 n 113 ILE 113 A ALA 114 n 114 ALA 114 A ASP 115 n 115 ASP 115 A GLN 116 n 116 GLN 116 A SER 117 n 117 SER 117 A ALA 118 n 118 ALA 118 A CYS 119 n 119 CYS 119 A GLY 120 n 120 GLY 120 A SER 121 n 121 SER 121 A CYS 122 n 122 CYS 122 A TRP 123 n 123 TRP 123 A ALA 124 n 124 ALA 124 A VAL 125 n 125 VAL 125 A ALA 126 n 126 ALA 126 A ALA 127 n 127 ALA 127 A ALA 128 n 128 ALA 128 A SER 129 n 129 SER 129 A ALA 130 n 130 ALA 130 A MET 131 n 131 MET 131 A SER 132 n 132 SER 132 A ASP 133 n 133 ASP 133 A ARG 134 n 134 ARG 134 A PHE 135 n 135 PHE 135 A CYS 136 n 136 CYS 136 A THR 137 n 137 THR 137 A MET 138 n 138 MET 138 A GLY 139 n 139 GLY 139 A GLY 140 n 140 GLY 140 A VAL 141 n 141 VAL 141 A GLN 142 n 142 GLN 142 A ASP 143 n 143 ASP 143 A VAL 144 n 144 VAL 144 A HIS 145 n 145 HIS 145 A ILE 146 n 146 ILE 146 A SER 147 n 147 SER 147 A ALA 148 n 148 ALA 148 A GLY 149 n 149 GLY 149 A ASP 150 n 150 ASP 150 A LEU 151 n 151 LEU 151 A LEU 152 n 152 LEU 152 A ALA 153 n 153 ALA 153 A CYS 154 n 154 CYS 154 A CYS 155 n 155 CYS 155 A SER 156 n 156 SER 156 A ASP 157 n 157 ASP 157 A CYS 158 n 158 CYS 158 A GLY 159 n 159 GLY 159 A ASP 160 n 160 ASP 160 A GLY 161 n 161 GLY 161 A CYS 162 n 162 CYS 162 A ASN 163 n 163 ASN 163 A GLY 164 n 164 GLY 164 A GLY 165 n 165 GLY 165 A ASP 166 n 166 ASP 166 A PRO 167 n 167 PRO 167 A ASP 168 n 168 ASP 168 A ARG 169 n 169 ARG 169 A ALA 170 n 170 ALA 170 A TRP 171 n 171 TRP 171 A ALA 172 n 172 ALA 172 A TYR 173 n 173 TYR 173 A PHE 174 n 174 PHE 174 A SER 175 n 175 SER 175 A SER 176 n 176 SER 176 A THR 177 n 177 THR 177 A GLY 178 n 178 GLY 178 A LEU 179 n 179 LEU 179 A VAL 180 n 180 VAL 180 A SER 181 n 181 SER 181 A ASP 182 n 182 ASP 182 A TYR 183 n 183 TYR 183 A CYS 184 n 184 CYS 184 A GLN 185 n 185 GLN 185 A PRO 186 n 186 PRO 186 A TYR 187 n 187 TYR 187 A PRO 188 n 188 PRO 188 A PHE 189 n 189 PHE 189 A PRO 190 n 190 PRO 190 A HIS 191 n 191 HIS 191 A CYS 192 n 192 CYS 192 A SER 193 n 193 SER 193 A HIS 194 n 194 HIS 194 A HIS 195 n 195 HIS 195 A SER 196 n 196 SER 196 A LYS 197 n 197 LYS 197 A SER 198 n 198 SER 198 A LYS 199 n 199 LYS 199 A ASN 200 n 200 ASN 200 A GLY 201 n 201 GLY 201 A TYR 202 n 202 TYR 202 A PRO 203 n 203 PRO 203 A PRO 204 n 204 PRO 204 A CYS 205 n 205 CYS 205 A SER 206 n 206 SER 206 A GLN 207 n 207 GLN 207 A PHE 208 n 208 PHE 208 A ASN 209 n 209 ASN 209 A PHE 210 n 210 PHE 210 A ASP 211 n 211 ASP 211 A THR 212 n 212 THR 212 A PRO 213 n 213 PRO 213 A LYS 214 n 214 LYS 214 A CYS 215 n 215 CYS 215 A ASN 216 n 216 ASN 216 A TYR 217 n 217 TYR 217 A THR 218 n 218 THR 218 A CYS 219 n 219 CYS 219 A ASP 220 n 220 ASP 220 A ASP 221 n 221 ASP 221 A PRO 222 n 222 PRO 222 A THR 223 n 223 THR 223 A ILE 224 n 224 ILE 224 A PRO 225 n 225 PRO 225 A VAL 226 n 226 VAL 226 A VAL 227 n 227 VAL 227 A ASN 228 n 228 ASN 228 A TYR 229 n 229 TYR 229 A ARG 230 n 230 ARG 230 A SER 231 n 231 SER 231 A TRP 232 n 232 TRP 232 A THR 233 n 233 THR 233 A SER 234 n 234 SER 234 A TYR 235 n 235 TYR 235 A ALA 236 n 236 ALA 236 A LEU 237 n 237 LEU 237 A GLN 238 n 238 GLN 238 A GLY 239 n 239 GLY 239 A GLU 240 n 240 GLU 240 A ASP 241 n 241 ASP 241 A ASP 242 n 242 ASP 242 A TYR 243 n 243 TYR 243 A MET 244 n 244 MET 244 A ARG 245 n 245 ARG 245 A GLU 246 n 246 GLU 246 A LEU 247 n 247 LEU 247 A PHE 248 n 248 PHE 248 A PHE 249 n 249 PHE 249 A ARG 250 n 250 ARG 250 A GLY 251 n 251 GLY 251 A PRO 252 n 252 PRO 252 A PHE 253 n 253 PHE 253 A GLU 254 n 254 GLU 254 A VAL 255 n 255 VAL 255 A ALA 256 n 256 ALA 256 A PHE 257 n 257 PHE 257 A ASP 258 n 258 ASP 258 A VAL 259 n 259 VAL 259 A TYR 260 n 260 TYR 260 A GLU 261 n 261 GLU 261 A ASP 262 n 262 ASP 262 A PHE 263 n 263 PHE 263 A ILE 264 n 264 ILE 264 A ALA 265 n 265 ALA 265 A TYR 266 n 266 TYR 266 A ASN 267 n 267 ASN 267 A SER 268 n 268 SER 268 A GLY 269 n 269 GLY 269 A VAL 270 n 270 VAL 270 A TYR 271 n 271 TYR 271 A HIS 272 n 272 HIS 272 A HIS 273 n 273 HIS 273 A VAL 274 n 274 VAL 274 A SER 275 n 275 SER 275 A GLY 276 n 276 GLY 276 A GLN 277 n 277 GLN 277 A TYR 278 n 278 TYR 278 A LEU 279 n 279 LEU 279 A GLY 280 n 280 GLY 280 A GLY 281 n 281 GLY 281 A HIS 282 n 282 HIS 282 A ALA 283 n 283 ALA 283 A VAL 284 n 284 VAL 284 A ARG 285 n 285 ARG 285 A LEU 286 n 286 LEU 286 A VAL 287 n 287 VAL 287 A GLY 288 n 288 GLY 288 A TRP 289 n 289 TRP 289 A GLY 290 n 290 GLY 290 A THR 291 n 291 THR 291 A SER 292 n 292 SER 292 A ASN 293 n 293 ASN 293 A GLY 294 n 294 GLY 294 A VAL 295 n 295 VAL 295 A PRO 296 n 296 PRO 296 A TYR 297 n 297 TYR 297 A TRP 298 n 298 TRP 298 A LYS 299 n 299 LYS 299 A ILE 300 n 300 ILE 300 A ALA 301 n 301 ALA 301 A ASN 302 n 302 ASN 302 A SER 303 n 303 SER 303 A TRP 304 n 304 TRP 304 A ASN 305 n 305 ASN 305 A THR 306 n 306 THR 306 A GLU 307 n 307 GLU 307 A TRP 308 n 308 TRP 308 A GLY 309 n 309 GLY 309 A MET 310 n 310 MET 310 A ASP 311 n 311 ASP 311 A GLY 312 n 312 GLY 312 A TYR 313 n 313 TYR 313 A PHE 314 n 314 PHE 314 A LEU 315 n 315 LEU 315 A ILE 316 n 316 ILE 316 A ARG 317 n 317 ARG 317 A ARG 318 n 318 ARG 318 A GLY 319 n 319 GLY 319 A SER 320 n 320 SER 320 A SER 321 n 321 SER 321 A GLU 322 n 322 GLU 322 A CYS 323 n 323 CYS 323 A GLY 324 n 324 GLY 324 A ILE 325 n 325 ILE 325 A GLU 326 n 326 GLU 326 A ASP 327 n 327 ASP 327 A GLY 328 n 328 GLY 328 A GLY 329 n 329 GLY 329 A SER 330 n 330 SER 330 A ALA 331 n 331 ALA 331 A GLY 332 n 332 GLY 332 A ILE 333 n 333 ILE 333 A PRO 334 n 334 PRO 334 A LEU 335 n 335 LEU 335 A ALA 336 n 336 ALA 336 A PRO 337 n 337 PRO 337 A ASN 338 n 338 ASN 338 A THR 339 n 339 THR 339 A ALA 340 n 340 ALA 340 A author_defined_assembly 1 monomeric A ASN 216 GLYCOSYLATION SITE A ASN 216 ASN A ASN 58 GLYCOSYLATION SITE A ASN 58 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LYS 49 A N LYS 49 A O SER 268 A O SER 268 A N TYR 271 A N TYR 271 A O ARG 317 A O ARG 317 A O PHE 314 A O PHE 314 A N ILE 300 A N ILE 300 A O ALA 301 A O ALA 301 A N ARG 285 A N ARG 285 A O TRP 289 A O TRP 289 A N PHE 98 A N PHE 98 A N LYS 49 A N LYS 49 A O SER 268 A O SER 268 A N TYR 271 A N TYR 271 A O ARG 317 A O ARG 317 A O PHE 314 A O PHE 314 A N ILE 300 A N ILE 300 A O ALA 301 A O ALA 301 A N ARG 285 A N ARG 285 A O LEU 279 A O LEU 279 A N VAL 259 A N VAL 259 A N GLU 254 A N GLU 254 A O SER 330 A O SER 330 A O GLY 329 A O GLY 329 A N LEU 237 A N LEU 237 1 A HOH 501 D HOH 1 A HOH 590 D HOH 1 A CD LYS 34 A CD LYS 34 0 Y 1 A CE LYS 34 A CE LYS 34 0 Y 1 A NZ LYS 34 A NZ LYS 34 0 Y 1 A NE ARG 45 A NE ARG 45 0 Y 1 A CZ ARG 45 A CZ ARG 45 0 Y 1 A NH1 ARG 45 A NH1 ARG 45 0 Y 1 A NH2 ARG 45 A NH2 ARG 45 0 Y 1 A CG LYS 49 A CG LYS 49 0 Y 1 A CD LYS 49 A CD LYS 49 0 Y 1 A CE LYS 49 A CE LYS 49 0 Y 1 A NZ LYS 49 A NZ LYS 49 0 Y 1 A CD LYS 82 A CD LYS 82 0 Y 1 A CE LYS 82 A CE LYS 82 0 Y 1 A NZ LYS 82 A NZ LYS 82 0 Y 1 A NE ARG 84 A NE ARG 84 0 Y 1 A CZ ARG 84 A CZ ARG 84 0 Y 1 A NH1 ARG 84 A NH1 ARG 84 0 Y 1 A NH2 ARG 84 A NH2 ARG 84 0 Y 1 A CD GLU 87 A CD GLU 87 0 Y 1 A OE1 GLU 87 A OE1 GLU 87 0 Y 1 A OE2 GLU 87 A OE2 GLU 87 0 Y 1 A CG LYS 197 A CG LYS 197 0 Y 1 A CD LYS 197 A CD LYS 197 0 Y 1 A CE LYS 197 A CE LYS 197 0 Y 1 A NZ LYS 197 A NZ LYS 197 0 Y 1 A CG LYS 199 A CG LYS 199 0 Y 1 A CD LYS 199 A CD LYS 199 0 Y 1 A CE LYS 199 A CE LYS 199 0 Y 1 A NZ LYS 199 A NZ LYS 199 0 Y 1 A OD1 ASN 209 A OD1 ASN 209 0 Y 1 A ND2 ASN 209 A ND2 ASN 209 0 Y 1 A OD1 ASP 211 A OD1 ASP 211 0 Y 1 A OD2 ASP 211 A OD2 ASP 211 0 Y 1 A CE LYS 214 A CE LYS 214 0 Y 1 A NZ LYS 214 A NZ LYS 214 0 Y 1 A OE1 GLN 238 A OE1 GLN 238 0 Y 1 A NE2 GLN 238 A NE2 GLN 238 0 Y 1 A NE ARG 317 A NE ARG 317 0 Y 1 A CZ ARG 317 A CZ ARG 317 0 Y 1 A NH1 ARG 317 A NH1 ARG 317 0 Y 1 A NH2 ARG 317 A NH2 ARG 317 0 Y 1 B C6 NAG 2 B C6 NAG 0 N 1 B O6 NAG 2 B O6 NAG 0 N 1 C C6 NAG 1 C C6 NAG 0 N 1 C O6 NAG 1 C O6 NAG 0 N 1 C C6 NAG 2 C C6 NAG 0 N 1 C O4 NAG 2 C O4 NAG 0 N 1 C O6 NAG 2 C O6 NAG 0 N 1 A MET 1 A MET 1 1 Y 1 A HIS 2 A HIS 2 1 Y 1 A LEU 3 A LEU 3 1 Y 1 A MET 4 A MET 4 1 Y 1 A ARG 5 A ARG 5 1 Y 1 A ALA 6 A ALA 6 1 Y 1 A CYS 7 A CYS 7 1 Y 1 A ILE 8 A ILE 8 1 Y 1 A THR 9 A THR 9 1 Y 1 A PHE 10 A PHE 10 1 Y 1 A CYS 11 A CYS 11 1 Y 1 A ILE 12 A ILE 12 1 Y 1 A ALA 13 A ALA 13 1 Y 1 A SER 14 A SER 14 1 Y 1 A THR 15 A THR 15 1 Y 1 A ALA 16 A ALA 16 1 Y 1 A VAL 17 A VAL 17 1 Y 1 A VAL 18 A VAL 18 1 Y 1 A ALA 19 A ALA 19 1 Y 1 A VAL 20 A VAL 20 1 Y 1 A ASN 21 A ASN 21 1 Y 1 A ALA 22 A ALA 22 1 Y 1 A ALA 23 A ALA 23 1 Y 1 A LEU 24 A LEU 24 1 Y 1 A VAL 25 A VAL 25 1 Y 1 A ALA 26 A ALA 26 1 Y 1 A LYS 73 A LYS 73 1 Y 1 A ASN 74 A ASN 74 1 Y 1 A ASN 75 A ASN 75 1 Y 1 A ASN 76 A ASN 76 1 Y 1 A ALA 77 A ALA 77 1 Y 1 A SER 78 A SER 78 1 Y 1 A ASN 209 0.131 SIDE CHAIN 1 A ASP 53 -96.41 40.33 1 A TRP 104 -116.73 74.59 1 A SER 117 66.05 -158.66 1 A ASP 143 -150.71 73.98 1 A ASN 293 35.04 55.64 1 A ASN 305 63.43 177.14 1 A SER 321 31.93 54.15 1 A ASN 338 55.03 -135.93 46.244 0.36 0.00 -0.00 0.36 0.00 -0.72 0.964 0.957 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT 0.21308 0.18181 0.18335 2.10 88.67 1321 24648 24648 5.1 99.99 4.531 0.113 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.161 0.145 0.80 0.80 1.20 PDB entry 3MOR MAXIMUM LIKELIHOOD MASK 2.10 88.67 98 2551 67 0 2386 0.013 0.020 2486 1.540 1.952 3396 6.964 5.000 306 33.250 23.661 112 15.671 15.000 329 21.773 15.000 13 0.122 0.200 354 0.012 0.021 1965 0.368 0.317 2.155 90 1612 20 100.00 2.1 20 4HWY 25969 25969 0 0 1 100 2.1 2.175 1 100 data collection CXI DAQ phasing MOLREP refinement REFMAC 5.6.0117 data reduction CrystFEL data scaling CrystFEL Trypanosoma brucei procathepsin B solved from 40 fs free-electron laser pulse data by serial femtosecond X-ray crystallography 1 N N 2 N N 3 N N 4 N N A SER 33 A SER 33 HELX_P A ASN 44 A ASN 44 1 1 12 A THR 60 A THR 60 HELX_P A LEU 67 A LEU 67 1 2 8 A THR 86 A THR 86 HELX_P A ALA 92 A ALA 92 1 3 7 A SER 100 A SER 100 HELX_P A TRP 104 A TRP 104 1 4 5 A SER 121 A SER 121 HELX_P A MET 138 A MET 138 1 5 18 A SER 147 A SER 147 HELX_P A CYS 155 A CYS 155 1 6 9 A SER 156 A SER 156 HELX_P A GLY 159 A GLY 159 5 7 4 A ASP 160 A ASP 160 HELX_P A GLY 164 A GLY 164 5 8 5 A ASP 166 A ASP 166 HELX_P A THR 177 A THR 177 1 9 12 A PRO 204 A PRO 204 HELX_P A PHE 208 A PHE 208 5 10 5 A GLY 239 A GLY 239 HELX_P A GLY 251 A GLY 251 1 11 13 A GLU 261 A GLU 261 HELX_P A ALA 265 A ALA 265 1 12 5 A SER 321 A SER 321 HELX_P A ILE 325 A ILE 325 5 13 5 disulf 2.081 A CYS 107 A SG CYS 107 1_555 A CYS 136 A SG CYS 136 1_555 disulf 2.051 A CYS 119 A SG CYS 119 1_555 A CYS 162 A SG CYS 162 1_555 disulf 2.031 A CYS 154 A SG CYS 154 1_555 A CYS 215 A SG CYS 215 1_555 disulf 2.020 A CYS 155 A SG CYS 155 1_555 A CYS 158 A SG CYS 158 1_555 disulf 2.051 A CYS 184 A SG CYS 184 1_555 A CYS 219 A SG CYS 219 1_555 disulf 2.043 A CYS 192 A SG CYS 192 1_555 A CYS 205 A SG CYS 205 1_555 covale 1.438 one N-Glycosylation A ASN 58 A ND2 ASN 58 1_555 C NAG 1 C C1 NAG 1_555 covale 1.418 one N-Glycosylation A ASN 216 A ND2 ASN 216 1_555 B NAG 1 B C1 NAG 1_555 covale 1.413 both sing B NAG 1 B O4 NAG 1_555 B NAG 2 B C1 NAG 1_555 covale 1.435 both B NAG 2 B O4 NAG 1_555 B BMA 3 B C1 BMA 1_555 covale 1.433 both sing C NAG 1 C O4 NAG 1_555 C NAG 2 C C1 NAG 1_555 HYDROLASE Papain fold, Lysosomal cysteine protease, HYDROLASE D6XHE1_TRYB2 UNP 1 1 D6XHE1 MHLMRACITFCIASTAVVAVNAALVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLNGVIKKNNNASIL PKRRFTEEEARAPLPSSFDSAEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGD GCNGGDPDRAWAYFSSTGLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCNYTCDDPTIPVVNYRSWTSYALQGE DDYMRELFFRGPFEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGS SECGIEDGGSAGIPLAPNTA 1 340 4HWY 1 340 D6XHE1 A 1 1 340 6 8 anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TRP 48 A TRP 48 A ALA 50 A ALA 50 A TYR 266 A TYR 266 A TYR 271 A TYR 271 A TYR 313 A TYR 313 A ARG 317 A ARG 317 A VAL 295 A VAL 295 A ALA 301 A ALA 301 A TYR 278 A TYR 278 A SER 292 A SER 292 A PHE 98 A PHE 98 A ASP 99 A ASP 99 A TRP 48 A TRP 48 A ALA 50 A ALA 50 A TYR 266 A TYR 266 A TYR 271 A TYR 271 A TYR 313 A TYR 313 A ARG 317 A ARG 317 A VAL 295 A VAL 295 A ALA 301 A ALA 301 A TYR 278 A TYR 278 A SER 292 A SER 292 A PHE 253 A PHE 253 A TYR 260 A TYR 260 A GLY 329 A GLY 329 A PRO 334 A PRO 334 A SER 231 A SER 231 A LEU 237 A LEU 237 94 P 42 21 2