0.019309 0.000000 0.009699 0.000000 0.016639 0.000000 0.000000 0.000000 0.020376 0.00000 0.00000 0.00000 Stura, E.A. Vera, L. Devel, L. Cassar-Lajeunesse, E. Dive, V. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 116.67 90.00 51.790 60.100 54.920 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer C2 H6 O S 78.133 DIMETHYL SULFOXIDE non-polymer C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C58 H66 N4 O11 S2 1059.295 (4R,22R)-5,21-dioxo-4,22-bis({3-[4-(4-phenylthiophen-2-yl)phenyl]propanoyl}amino)-10,13,16-trioxa-6,20-diazapentacosane-1,25-dioic acid non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C4 H10 O3 106.120 DI(HYDROXYETHYL)ETHER non-polymer C3 H8 O2 76.094 S-1,2-PROPANEDIOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N S N 76 N O N 77 N C N 78 N C N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N C N 86 N O N 87 N C N 88 N O N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N N N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 N C N 136 N C N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N C N 145 N O N 146 N C N 147 N O N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C Y 163 N C Y 164 N N Y 165 N C Y 166 N C Y 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N N N 183 S C N 184 N C N 185 N O N 186 S C N 187 N C N 188 N C N 189 N C N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N O N 205 N C N 206 N C N 207 N C Y 208 N C Y 209 N C Y 210 N C Y 211 N C Y 212 N C Y 213 N S Y 214 N C Y 215 N C Y 216 N C Y 217 N C Y 218 N C Y 219 N C Y 220 N C Y 221 N C Y 222 N C Y 223 N C Y 224 N C N 225 N N N 226 R C N 227 N C N 228 N C N 229 N C N 230 N O N 231 N O N 232 N C N 233 N O N 234 N N N 235 N C N 236 N C N 237 N C N 238 N O N 239 N C N 240 N C N 241 N O N 242 N C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N N N 249 N C N 250 N O N 251 R C N 252 N C N 253 N C N 254 N C N 255 N O N 256 N O N 257 N N N 258 N C N 259 N O N 260 N C N 261 N C Y 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C Y 268 N C Y 269 N C Y 270 N C Y 271 N C Y 272 N S Y 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C Y 278 N C N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N C N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N N N 368 S C N 369 N C N 370 N O N 371 N C N 372 N C N 373 N C N 374 N C N 375 N N N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N C N 398 N S N 399 N C N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N C N 413 N O N 414 N C N 415 N O N 416 N C N 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N C N 430 S C N 431 N C N 432 N O N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N N N 443 S C N 444 N C N 445 N O N 446 N C Y 447 N C Y 448 N C Y 449 N C Y 450 N C Y 451 N C Y 452 N C N 453 N O N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N N N 466 S C N 467 N C N 468 N O N 469 N C N 470 N C N 471 N C N 472 N O N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N N N 483 S C N 484 N C N 485 N O N 486 N C N 487 N O N 488 N O N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N N N 497 S C N 498 N C N 499 N O N 500 R C N 501 N O N 502 N C N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N N N 514 S C N 515 N C N 516 N O N 517 N C Y 518 N C Y 519 N C Y 520 N C Y 521 N N Y 522 N C Y 523 N C Y 524 N C Y 525 N C Y 526 N C N 527 N O N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N N N 541 S C N 542 N C N 543 N O N 544 N C Y 545 N C Y 546 N C Y 547 N C Y 548 N C Y 549 N C Y 550 N C N 551 N O N 552 N O N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N H N 563 N H N 564 N N N 565 S C N 566 N C N 567 N O N 568 N C N 569 N C N 570 N C N 571 N O N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 581 N H N 582 N H N 583 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing Y 158 N sing Y 159 N doub Y 160 N doub N 161 N sing Y 162 N sing N 163 N sing Y 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing Y 191 N sing Y 192 N doub Y 193 N sing Y 194 N doub Y 195 N sing Y 196 N sing N 197 N sing Y 198 N sing Y 199 N doub Y 200 N doub Y 201 N sing Y 202 N doub N 203 N sing Y 204 N doub Y 205 N sing Y 206 N doub Y 207 N sing N 208 N sing Y 209 N doub Y 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing Y 251 N doub Y 252 N sing N 253 N sing Y 254 N sing Y 255 N doub Y 256 N doub Y 257 N sing Y 258 N sing N 259 N sing Y 260 N doub Y 261 N sing Y 262 N doub Y 263 N doub Y 264 N sing Y 265 N sing N 266 N sing Y 267 N doub Y 268 N doub Y 269 N sing Y 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing Y 440 N doub Y 441 N sing Y 442 N sing N 443 N sing Y 444 N doub N 445 N sing Y 446 N doub N 447 N sing Y 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N doub N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N doub N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N doub N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N doub N 505 N sing N 506 N sing N 507 N sing N 508 N sing Y 509 N doub Y 510 N sing Y 511 N sing N 512 N sing Y 513 N doub Y 514 N sing Y 515 N sing N 516 N sing Y 517 N sing Y 518 N doub N 519 N sing Y 520 N doub N 521 N sing Y 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N doub N 533 N sing N 534 N sing N 535 N sing N 536 N sing Y 537 N doub Y 538 N sing Y 539 N sing N 540 N sing Y 541 N doub N 542 N sing Y 543 N doub N 544 N sing Y 545 N sing N 546 N sing N 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N doub N 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing US J.Struct.Biol. JSBIEM 0803 1047-8477 182 246 254 10.1016/j.jsb.2013.03.015 23567804 Crystallization of bi-functional ligand protein complexes. 2013 UK Bioorg.Med.Chem.Lett. BMCLE8 1127 0960-894X 15 2311 2314 10.1016/j.bmcl.2005.03.002 15837315 A new development of matrix metalloproteinase inhibitors: twin hydroxamic acids as potent inhibitors of MMPs. 2005 UK To Be Published BMCLE8 1127 0960-894X 10.2210/pdb4i03/pdb pdb_00004i03 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors PIXEL 2012-10-12 PSI PILATUS 6M SAGITALLY FOCUSED Si(111) SINGLE WAVELENGTH M x-ray 1 0.980110 1.0 PROXIMA 1 SOLEIL 0.980110 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 17557.633 Macrophage metalloelastase 3.4.24.65 catalytic domain (UNP residues 106-263) F171D, E219A 1 man polymer 65.409 ZINC ION 2 syn non-polymer 40.078 CALCIUM ION 3 syn non-polymer 1059.295 (4R,22R)-5,21-dioxo-4,22-bis({3-[4-(4-phenylthiophen-2-yl)phenyl]propanoyl}amino)-10,13,16-trioxa-6,20-diazapentacosane-1,25-dioic acid 1 syn non-polymer 92.094 GLYCEROL 3 syn non-polymer 76.094 S-1,2-PROPANEDIOL 2 syn non-polymer 78.133 DIMETHYL SULFOXIDE 2 syn non-polymer 62.068 1,2-ETHANEDIOL 4 syn non-polymer 106.120 DI(HYDROXYETHYL)ETHER 1 syn non-polymer 18.015 water 171 nat water MME, Macrophage elastase, ME, hME, Matrix metalloproteinase-12, MMP-12 no no MGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHA FGPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG MGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHA FGPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Escherichia coli sample HME, MMP12 9606 Homo sapiens 511693 Escherichia coli BL21 PLASMID PET24A 1 2.18 43.45 VAPOR DIFFUSION, SITTING DROP 8.5 Protein solution: 222 microM MMP12 mutant E219A 106 microM bifunctional inhibitor LD884. Reservoir: 27% PEG 10K, 150mM imidazole piperidine, pH 8.5. Cryoprotectant: 5 % di-ethylene glycol + 5 % ethylene glycol + 10 % 1,2-propanediol + 5 % DMSO + 5 % glycerol, 25% MPEG 5K, 100mM (Na acetate, ADA, Bicine 10% pH 4.0/90% pH 9.0), VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations 1 0 2013-04-24 1 1 2013-07-03 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Human MMP12 in complex with L-glutamate motif inhibitor Human MMP12 in complex with L-glutamate motif inhibitor Human MMP12 in complex with L-glutamate motif inhibitor Crystal structure of the catalytic domain of MMP-12 in complex with a twin inhibitor. Crystal structure of Crystal structure of the catalytic domain of MMP-12 in complex with a twin inhibitor. RCSB Y RCSB 2012-11-16 REL REL ZN ZINC ION CA CALCIUM ION L88 (4R,22R)-5,21-dioxo-4,22-bis({3-[4-(4-phenylthiophen-2-yl)phenyl]propanoyl}amino)-10,13,16-trioxa-6,20-diazapentacosane-1,25-dioic acid GOL GLYCEROL PGO S-1,2-PROPANEDIOL DMS DIMETHYL SULFOXIDE EDO 1,2-ETHANEDIOL PEG DI(HYDROXYETHYL)ETHER HOH water ZN 500 2 ZN ZN 301 A ZN 501 2 ZN ZN 302 A CA 502 3 CA CA 303 A CA 503 3 CA CA 304 A CA 504 3 CA CA 305 A L88 1 4 L88 L88 306 A GOL 1 5 GOL GOL 307 A GOL 3 5 GOL GOL 308 A GOL 4 5 GOL GOL 309 A PGO 1 6 PGO PGO 310 A PGO 2 6 PGO PGO 311 A DMS 1 7 DMS DMS 312 A DMS 2 7 DMS DMS 313 A EDO 1 8 EDO EDO 314 A EDO 2 8 EDO EDO 315 A EDO 3 8 EDO EDO 316 A EDO 4 8 EDO EDO 317 A PEG 1 9 PEG PEG 318 A HOH 1 10 HOH HOH 401 A HOH 2 10 HOH HOH 402 A HOH 3 10 HOH HOH 403 A HOH 4 10 HOH HOH 404 A HOH 5 10 HOH HOH 405 A HOH 6 10 HOH HOH 406 A HOH 7 10 HOH HOH 407 A HOH 8 10 HOH HOH 408 A HOH 9 10 HOH HOH 409 A HOH 10 10 HOH HOH 410 A HOH 11 10 HOH HOH 411 A HOH 12 10 HOH HOH 412 A HOH 13 10 HOH HOH 413 A HOH 14 10 HOH HOH 414 A HOH 15 10 HOH HOH 415 A HOH 16 10 HOH HOH 416 A HOH 17 10 HOH HOH 417 A HOH 18 10 HOH HOH 418 A HOH 19 10 HOH HOH 419 A HOH 20 10 HOH HOH 420 A HOH 22 10 HOH HOH 421 A HOH 23 10 HOH HOH 422 A HOH 24 10 HOH HOH 423 A HOH 25 10 HOH HOH 424 A HOH 26 10 HOH HOH 425 A HOH 27 10 HOH HOH 426 A HOH 28 10 HOH HOH 427 A HOH 29 10 HOH HOH 428 A HOH 30 10 HOH HOH 429 A HOH 31 10 HOH HOH 430 A HOH 32 10 HOH HOH 431 A HOH 33 10 HOH HOH 432 A HOH 34 10 HOH HOH 433 A HOH 36 10 HOH HOH 434 A HOH 37 10 HOH HOH 435 A HOH 38 10 HOH HOH 436 A HOH 39 10 HOH HOH 437 A HOH 41 10 HOH HOH 438 A HOH 43 10 HOH HOH 439 A HOH 45 10 HOH HOH 440 A HOH 49 10 HOH HOH 441 A HOH 50 10 HOH HOH 442 A HOH 51 10 HOH HOH 443 A HOH 53 10 HOH HOH 444 A HOH 54 10 HOH HOH 445 A HOH 56 10 HOH HOH 446 A HOH 57 10 HOH HOH 447 A HOH 58 10 HOH HOH 448 A HOH 59 10 HOH HOH 449 A HOH 60 10 HOH HOH 450 A HOH 61 10 HOH HOH 451 A HOH 62 10 HOH HOH 452 A HOH 63 10 HOH HOH 453 A HOH 64 10 HOH HOH 454 A HOH 65 10 HOH HOH 455 A HOH 66 10 HOH HOH 456 A HOH 67 10 HOH HOH 457 A HOH 69 10 HOH HOH 458 A HOH 70 10 HOH HOH 459 A HOH 72 10 HOH HOH 460 A HOH 73 10 HOH HOH 461 A HOH 75 10 HOH HOH 462 A HOH 76 10 HOH HOH 463 A HOH 78 10 HOH HOH 464 A HOH 79 10 HOH HOH 465 A HOH 80 10 HOH HOH 466 A HOH 81 10 HOH HOH 467 A HOH 82 10 HOH HOH 468 A HOH 83 10 HOH HOH 469 A HOH 84 10 HOH HOH 470 A HOH 85 10 HOH HOH 471 A HOH 86 10 HOH HOH 472 A HOH 88 10 HOH HOH 473 A HOH 89 10 HOH HOH 474 A HOH 90 10 HOH HOH 475 A HOH 91 10 HOH HOH 476 A HOH 92 10 HOH HOH 477 A HOH 94 10 HOH HOH 478 A HOH 95 10 HOH HOH 479 A HOH 96 10 HOH HOH 480 A HOH 97 10 HOH HOH 481 A HOH 99 10 HOH HOH 482 A HOH 100 10 HOH HOH 483 A HOH 101 10 HOH HOH 484 A HOH 102 10 HOH HOH 485 A HOH 105 10 HOH HOH 486 A HOH 107 10 HOH HOH 487 A HOH 108 10 HOH HOH 488 A HOH 109 10 HOH HOH 489 A HOH 111 10 HOH HOH 490 A HOH 112 10 HOH HOH 491 A HOH 114 10 HOH HOH 492 A HOH 117 10 HOH HOH 493 A HOH 118 10 HOH HOH 494 A HOH 119 10 HOH HOH 495 A HOH 120 10 HOH HOH 496 A HOH 123 10 HOH HOH 497 A HOH 130 10 HOH HOH 498 A HOH 131 10 HOH HOH 499 A HOH 133 10 HOH HOH 500 A HOH 135 10 HOH HOH 501 A HOH 136 10 HOH HOH 502 A HOH 140 10 HOH HOH 503 A HOH 141 10 HOH HOH 504 A HOH 143 10 HOH HOH 505 A HOH 144 10 HOH HOH 506 A HOH 147 10 HOH HOH 507 A HOH 148 10 HOH HOH 508 A HOH 149 10 HOH HOH 509 A HOH 150 10 HOH HOH 510 A HOH 151 10 HOH HOH 511 A HOH 152 10 HOH HOH 512 A HOH 157 10 HOH HOH 513 A HOH 159 10 HOH HOH 514 A HOH 160 10 HOH HOH 515 A HOH 163 10 HOH HOH 516 A HOH 167 10 HOH HOH 517 A HOH 168 10 HOH HOH 518 A HOH 169 10 HOH HOH 519 A HOH 170 10 HOH HOH 520 A HOH 171 10 HOH HOH 521 A HOH 172 10 HOH HOH 522 A HOH 173 10 HOH HOH 523 A HOH 174 10 HOH HOH 524 A HOH 175 10 HOH HOH 525 A HOH 176 10 HOH HOH 526 A HOH 179 10 HOH HOH 527 A HOH 181 10 HOH HOH 528 A HOH 183 10 HOH HOH 529 A HOH 184 10 HOH HOH 530 A HOH 185 10 HOH HOH 531 A HOH 186 10 HOH HOH 532 A HOH 187 10 HOH HOH 533 A HOH 188 10 HOH HOH 534 A HOH 190 10 HOH HOH 535 A HOH 192 10 HOH HOH 536 A HOH 194 10 HOH HOH 537 A HOH 199 10 HOH HOH 538 A HOH 202 10 HOH HOH 539 A HOH 203 10 HOH HOH 540 A HOH 205 10 HOH HOH 541 A HOH 208 10 HOH HOH 542 A HOH 211 10 HOH HOH 543 A HOH 212 10 HOH HOH 544 A HOH 213 10 HOH HOH 545 A HOH 214 10 HOH HOH 546 A HOH 217 10 HOH HOH 547 A HOH 218 10 HOH HOH 548 A HOH 219 10 HOH HOH 549 A HOH 221 10 HOH HOH 550 A HOH 222 10 HOH HOH 551 A HOH 225 10 HOH HOH 552 A HOH 226 10 HOH HOH 553 A HOH 228 10 HOH HOH 554 A HOH 229 10 HOH HOH 555 A HOH 233 10 HOH HOH 556 A HOH 234 10 HOH HOH 557 A HOH 235 10 HOH HOH 558 A HOH 236 10 HOH HOH 559 A HOH 237 10 HOH HOH 560 A HOH 238 10 HOH HOH 561 A HOH 239 10 HOH HOH 562 A HOH 242 10 HOH HOH 563 A HOH 243 10 HOH HOH 564 A HOH 245 10 HOH HOH 565 A HOH 247 10 HOH HOH 566 A HOH 248 10 HOH HOH 567 A HOH 249 10 HOH HOH 568 A HOH 250 10 HOH HOH 569 A HOH 251 10 HOH HOH 570 A HOH 252 10 HOH HOH 571 A MET 105 n 1 MET 105 A GLY 106 n 2 GLY 106 A PRO 107 n 3 PRO 107 A VAL 108 n 4 VAL 108 A TRP 109 n 5 TRP 109 A ARG 110 n 6 ARG 110 A LYS 111 n 7 LYS 111 A HIS 112 n 8 HIS 112 A TYR 113 n 9 TYR 113 A ILE 114 n 10 ILE 114 A THR 115 n 11 THR 115 A TYR 116 n 12 TYR 116 A ARG 117 n 13 ARG 117 A ILE 118 n 14 ILE 118 A ASN 119 n 15 ASN 119 A ASN 120 n 16 ASN 120 A TYR 121 n 17 TYR 121 A THR 122 n 18 THR 122 A PRO 123 n 19 PRO 123 A ASP 124 n 20 ASP 124 A MET 125 n 21 MET 125 A ASN 126 n 22 ASN 126 A ARG 127 n 23 ARG 127 A GLU 128 n 24 GLU 128 A ASP 129 n 25 ASP 129 A VAL 130 n 26 VAL 130 A ASP 131 n 27 ASP 131 A TYR 132 n 28 TYR 132 A ALA 133 n 29 ALA 133 A ILE 134 n 30 ILE 134 A ARG 135 n 31 ARG 135 A LYS 136 n 32 LYS 136 A ALA 137 n 33 ALA 137 A PHE 138 n 34 PHE 138 A GLN 139 n 35 GLN 139 A VAL 140 n 36 VAL 140 A TRP 141 n 37 TRP 141 A SER 142 n 38 SER 142 A ASN 143 n 39 ASN 143 A VAL 144 n 40 VAL 144 A THR 145 n 41 THR 145 A PRO 146 n 42 PRO 146 A LEU 147 n 43 LEU 147 A LYS 148 n 44 LYS 148 A PHE 149 n 45 PHE 149 A SER 150 n 46 SER 150 A LYS 151 n 47 LYS 151 A ILE 152 n 48 ILE 152 A ASN 153 n 49 ASN 153 A THR 154 n 50 THR 154 A GLY 155 n 51 GLY 155 A MET 156 n 52 MET 156 A ALA 157 n 53 ALA 157 A ASP 158 n 54 ASP 158 A ILE 159 n 55 ILE 159 A LEU 160 n 56 LEU 160 A VAL 161 n 57 VAL 161 A VAL 162 n 58 VAL 162 A PHE 163 n 59 PHE 163 A ALA 164 n 60 ALA 164 A ARG 165 n 61 ARG 165 A GLY 166 n 62 GLY 166 A ALA 167 n 63 ALA 167 A HIS 168 n 64 HIS 168 A GLY 169 n 65 GLY 169 A ASP 170 n 66 ASP 170 A ASP 171 n 67 ASP 171 A HIS 172 n 68 HIS 172 A ALA 173 n 69 ALA 173 A PHE 174 n 70 PHE 174 A ASP 175 n 71 ASP 175 A GLY 176 n 72 GLY 176 A LYS 177 n 73 LYS 177 A GLY 178 n 74 GLY 178 A GLY 179 n 75 GLY 179 A ILE 180 n 76 ILE 180 A LEU 181 n 77 LEU 181 A ALA 182 n 78 ALA 182 A HIS 183 n 79 HIS 183 A ALA 184 n 80 ALA 184 A PHE 185 n 81 PHE 185 A GLY 186 n 82 GLY 186 A PRO 187 n 83 PRO 187 A GLY 188 n 84 GLY 188 A SER 189 n 85 SER 189 A GLY 190 n 86 GLY 190 A ILE 191 n 87 ILE 191 A GLY 192 n 88 GLY 192 A GLY 193 n 89 GLY 193 A ASP 194 n 90 ASP 194 A ALA 195 n 91 ALA 195 A HIS 196 n 92 HIS 196 A PHE 197 n 93 PHE 197 A ASP 198 n 94 ASP 198 A GLU 199 n 95 GLU 199 A ASP 200 n 96 ASP 200 A GLU 201 n 97 GLU 201 A PHE 202 n 98 PHE 202 A TRP 203 n 99 TRP 203 A THR 204 n 100 THR 204 A THR 205 n 101 THR 205 A HIS 206 n 102 HIS 206 A SER 207 n 103 SER 207 A GLY 208 n 104 GLY 208 A GLY 209 n 105 GLY 209 A THR 210 n 106 THR 210 A ASN 211 n 107 ASN 211 A LEU 212 n 108 LEU 212 A PHE 213 n 109 PHE 213 A LEU 214 n 110 LEU 214 A THR 215 n 111 THR 215 A ALA 216 n 112 ALA 216 A VAL 217 n 113 VAL 217 A HIS 218 n 114 HIS 218 A ALA 219 n 115 ALA 219 A ILE 220 n 116 ILE 220 A GLY 221 n 117 GLY 221 A HIS 222 n 118 HIS 222 A SER 223 n 119 SER 223 A LEU 224 n 120 LEU 224 A GLY 225 n 121 GLY 225 A LEU 226 n 122 LEU 226 A GLY 227 n 123 GLY 227 A HIS 228 n 124 HIS 228 A SER 229 n 125 SER 229 A SER 230 n 126 SER 230 A ASP 231 n 127 ASP 231 A PRO 232 n 128 PRO 232 A LYS 233 n 129 LYS 233 A ALA 234 n 130 ALA 234 A VAL 235 n 131 VAL 235 A MET 236 n 132 MET 236 A PHE 237 n 133 PHE 237 A PRO 238 n 134 PRO 238 A THR 239 n 135 THR 239 A TYR 240 n 136 TYR 240 A LYS 241 n 137 LYS 241 A TYR 242 n 138 TYR 242 A VAL 243 n 139 VAL 243 A ASP 244 n 140 ASP 244 A ILE 245 n 141 ILE 245 A ASN 246 n 142 ASN 246 A THR 247 n 143 THR 247 A PHE 248 n 144 PHE 248 A ARG 249 n 145 ARG 249 A LEU 250 n 146 LEU 250 A SER 251 n 147 SER 251 A ALA 252 n 148 ALA 252 A ASP 253 n 149 ASP 253 A ASP 254 n 150 ASP 254 A ILE 255 n 151 ILE 255 A ARG 256 n 152 ARG 256 A GLY 257 n 153 GLY 257 A ILE 258 n 154 ILE 258 A GLN 259 n 155 GLN 259 A SER 260 n 156 SER 260 A LEU 261 n 157 LEU 261 A TYR 262 n 158 TYR 262 A GLY 263 n 159 GLY 263 A author_defined_assembly 1 monomeric A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A ASP 124 A OD1 ASP 20 1_555 52.8 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 199 A O GLU 95 1_555 138.4 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 199 A O GLU 95 1_555 162.3 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 199 A OE2 GLU 95 1_555 86.7 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 199 A OE2 GLU 95 1_555 87.4 A GLU 199 A O GLU 95 1_555 A CA 304 E CA CA 1_555 A GLU 199 A OE2 GLU 95 1_555 80.7 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 201 A O GLU 97 1_555 74.8 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 A GLU 201 A O GLU 97 1_555 122.2 A GLU 199 A O GLU 95 1_555 A CA 304 E CA CA 1_555 A GLU 201 A O GLU 97 1_555 75.0 A GLU 199 A OE2 GLU 95 1_555 A CA 304 E CA CA 1_555 A GLU 201 A O GLU 97 1_555 114.6 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 98.0 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 86.3 A GLU 199 A O GLU 95 1_555 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 102.8 A GLU 199 A OE2 GLU 95 1_555 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 167.6 A GLU 201 A O GLU 97 1_555 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 77.7 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 136.7 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 84.0 A GLU 199 A O GLU 95 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 82.6 A GLU 199 A OE2 GLU 95 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 88.4 A GLU 201 A O GLU 97 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 144.1 A HOH 420 T O HOH 1_555 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 80.3 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 A GLY 190 A O GLY 86 1_555 166.0 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 A GLY 192 A O GLY 88 1_555 92.5 A GLY 190 A O GLY 86 1_555 A CA 303 D CA CA 1_555 A GLY 192 A O GLY 88 1_555 89.0 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 A ASP 194 A OD1 ASP 90 1_555 91.4 A GLY 190 A O GLY 86 1_555 A CA 303 D CA CA 1_555 A ASP 194 A OD1 ASP 90 1_555 102.4 A GLY 192 A O GLY 88 1_555 A CA 303 D CA CA 1_555 A ASP 194 A OD1 ASP 90 1_555 92.2 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 A HOH 414 T O HOH 1_555 90.9 A GLY 190 A O GLY 86 1_555 A CA 303 D CA CA 1_555 A HOH 414 T O HOH 1_555 85.6 A GLY 192 A O GLY 88 1_555 A CA 303 D CA CA 1_555 A HOH 414 T O HOH 1_555 170.7 A ASP 194 A OD1 ASP 90 1_555 A CA 303 D CA CA 1_555 A HOH 414 T O HOH 1_555 96.4 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 84.1 A GLY 190 A O GLY 86 1_555 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 82.3 A GLY 192 A O GLY 88 1_555 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 83.0 A ASP 194 A OD1 ASP 90 1_555 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 173.3 A HOH 414 T O HOH 1_555 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 88.7 A HIS 168 A NE2 HIS 64 1_555 A ZN 302 C ZN ZN 1_555 A ASP 170 A OD2 ASP 66 1_555 108.2 A HIS 168 A NE2 HIS 64 1_555 A ZN 302 C ZN ZN 1_555 A HIS 196 A ND1 HIS 92 1_555 106.3 A ASP 170 A OD2 ASP 66 1_555 A ZN 302 C ZN ZN 1_555 A HIS 196 A ND1 HIS 92 1_555 93.3 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 A GLY 176 A O GLY 72 1_555 85.2 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 A GLY 178 A O GLY 74 1_555 85.0 A GLY 176 A O GLY 72 1_555 A CA 305 F CA CA 1_555 A GLY 178 A O GLY 74 1_555 82.6 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 A ILE 180 A O ILE 76 1_555 97.8 A GLY 176 A O GLY 72 1_555 A CA 305 F CA CA 1_555 A ILE 180 A O ILE 76 1_555 176.9 A GLY 178 A O GLY 74 1_555 A CA 305 F CA CA 1_555 A ILE 180 A O ILE 76 1_555 96.7 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 A ASP 198 A OD2 ASP 94 1_555 93.9 A GLY 176 A O GLY 72 1_555 A CA 305 F CA CA 1_555 A ASP 198 A OD2 ASP 94 1_555 89.8 A GLY 178 A O GLY 74 1_555 A CA 305 F CA CA 1_555 A ASP 198 A OD2 ASP 94 1_555 172.4 A ILE 180 A O ILE 76 1_555 A CA 305 F CA CA 1_555 A ASP 198 A OD2 ASP 94 1_555 91.0 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 A GLU 201 A OE2 GLU 97 1_555 168.7 A GLY 176 A O GLY 72 1_555 A CA 305 F CA CA 1_555 A GLU 201 A OE2 GLU 97 1_555 87.6 A GLY 178 A O GLY 74 1_555 A CA 305 F CA CA 1_555 A GLU 201 A OE2 GLU 97 1_555 85.4 A ILE 180 A O ILE 76 1_555 A CA 305 F CA CA 1_555 A GLU 201 A OE2 GLU 97 1_555 89.3 A ASP 198 A OD2 ASP 94 1_555 A CA 305 F CA CA 1_555 A GLU 201 A OE2 GLU 97 1_555 94.9 A HIS 222 A NE2 HIS 118 1_555 A ZN 301 B ZN ZN 1_555 A HIS 228 A NE2 HIS 124 1_555 105.1 A HIS 222 A NE2 HIS 118 1_555 A ZN 301 B ZN ZN 1_555 A L88 306 G O4 L88 1_555 131.4 A HIS 228 A NE2 HIS 124 1_555 A ZN 301 B ZN ZN 1_555 A L88 306 G O4 L88 1_555 91.8 A HIS 222 A NE2 HIS 118 1_555 A ZN 301 B ZN ZN 1_555 A L88 306 G O4E L88 1_555 87.4 A HIS 228 A NE2 HIS 124 1_555 A ZN 301 B ZN ZN 1_555 A L88 306 G O4E L88 1_555 136.5 A L88 306 G O4 L88 1_555 A ZN 301 B ZN ZN 1_555 A L88 306 G O4E L88 1_555 52.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LYS 148 A O LYS 44 A N ILE 114 A N ILE 10 A N ARG 117 A N ARG 13 A O VAL 161 A O VAL 57 A N VAL 162 A N VAL 58 A O PHE 197 A O PHE 93 A O HIS 196 A O HIS 92 A N HIS 183 A N HIS 79 A N THR 204 A N THR 100 A O THR 210 A O THR 106 1 A HOH 484 T HOH 1 A ARG 110 -106.67 42.92 1 A HIS 172 -115.93 76.42 1 A HIS 206 -134.43 -155.45 1 A THR 247 A 91.30 1.07 19.560 0.05 0.00 0.06 -0.05 0.00 0.05 0.974 0.960 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.19397 0.14361 0.14626 1.70 36.67 834 16663 15828 5.0 100.00 2.294 0.074 RANDOM 1 Isotropic THROUGHOUT 0.0 -4 MOLECULAR REPLACEMENT 0.104 0.108 0.80 0.80 1.40 MAXIMUM LIKELIHOOD MASK 1.70 36.67 171 1552 139 0 1242 0.022 0.021 1501 0.002 0.020 1045 2.038 1.999 2015 1.033 3.000 2515 7.055 5.000 176 35.842 22.879 66 16.634 15.000 215 18.651 15.000 9 0.114 0.200 197 0.011 0.020 1673 0.003 0.020 343 1.372 1.500 836 0.414 1.500 347 2.290 2.000 1349 3.131 3.000 665 4.865 4.500 664 0.296 0.252 1.740 60 1124 20 100.00 28.35 1.7 50.0 4I03 16789 16663 0.0 -4.0 0.102 0.089 1 9.52 4.14 99.2 0.887 1.70 1.80 1.71 2693 0.768 1 4.02 97.2 0.520 1.80 1.92 3.06 2540 0.451 1 4.12 99.7 0.298 1.92 2.08 5.18 2372 0.259 1 4.19 99.6 0.198 2.08 2.27 7.34 2151 0.172 1 4.17 100.0 0.143 2.27 2.54 10.02 1983 0.125 1 4.26 99.7 0.097 2.54 2.93 13.95 1748 0.084 1 4.24 99.5 0.069 2.93 3.59 19.59 1480 0.060 1 4.23 99.5 0.053 3.59 5.07 24.75 1164 0.046 1 4.03 99.3 0.055 5.07 50.0 25.83 658 0.048 1 3.99 99.2 data collection DNA phasing MOLREP refinement REFMAC 5.5.0109 data reduction XDS data scaling XDS Human MMP12 in complex with a PEG-linked bifunctional L-glutamate motif inhibitor 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 4 N N 5 N N 5 N N 5 N N 6 N N 6 N N 7 N N 7 N N 8 N N 8 N N 8 N N 8 N N 9 N N 10 N N The bifunctional inhibitor joins two MMP-12 molecules creating a crystallographic dimer A ASN 126 A ASN 22 HELX_P A ASN 143 A ASN 39 1 1 18 A LEU 212 A LEU 108 HELX_P A LEU 224 A LEU 120 1 2 13 A SER 251 A SER 147 HELX_P A GLY 263 A GLY 159 1 3 13 metalc 2.313 A ASP 124 A OD2 ASP 20 1_555 A CA 304 E CA CA 1_555 metalc 2.555 A ASP 124 A OD1 ASP 20 1_555 A CA 304 E CA CA 1_555 metalc 2.236 A ASP 158 A O ASP 54 1_555 A CA 303 D CA CA 1_555 metalc 2.060 A HIS 168 A NE2 HIS 64 1_555 A ZN 302 C ZN ZN 1_555 metalc 1.877 A ASP 170 A OD2 ASP 66 1_555 A ZN 302 C ZN ZN 1_555 metalc 2.286 A ASP 175 A OD1 ASP 71 1_555 A CA 305 F CA CA 1_555 metalc 2.358 A GLY 176 A O GLY 72 1_555 A CA 305 F CA CA 1_555 metalc 2.360 A GLY 178 A O GLY 74 1_555 A CA 305 F CA CA 1_555 metalc 2.314 A ILE 180 A O ILE 76 1_555 A CA 305 F CA CA 1_555 metalc 2.390 A GLY 190 A O GLY 86 1_555 A CA 303 D CA CA 1_555 metalc 2.156 A GLY 192 A O GLY 88 1_555 A CA 303 D CA CA 1_555 metalc 2.501 A ASP 194 A OD1 ASP 90 1_555 A CA 303 D CA CA 1_555 metalc 2.009 A HIS 196 A ND1 HIS 92 1_555 A ZN 302 C ZN ZN 1_555 metalc 2.268 A ASP 198 A OD2 ASP 94 1_555 A CA 305 F CA CA 1_555 metalc 2.334 A GLU 199 A O GLU 95 1_555 A CA 304 E CA CA 1_555 metalc 2.369 A GLU 199 A OE2 GLU 95 1_555 A CA 304 E CA CA 1_555 metalc 2.460 A GLU 201 A O GLU 97 1_555 A CA 304 E CA CA 1_555 metalc 2.297 A GLU 201 A OE2 GLU 97 1_555 A CA 305 F CA CA 1_555 metalc 2.061 A HIS 222 A NE2 HIS 118 1_555 A ZN 301 B ZN ZN 1_555 metalc 2.105 A HIS 228 A NE2 HIS 124 1_555 A ZN 301 B ZN ZN 1_555 metalc 2.386 A ZN 301 B ZN ZN 1_555 A L88 306 G O4 L88 1_555 metalc 2.435 A ZN 301 B ZN ZN 1_555 A L88 306 G O4E L88 1_555 metalc 2.309 A CA 303 D CA CA 1_555 A HOH 414 T O HOH 1_555 metalc 2.453 A CA 303 D CA CA 1_555 A HOH 419 T O HOH 1_555 metalc 2.482 A CA 304 E CA CA 1_555 A HOH 420 T O HOH 1_555 metalc 2.496 A CA 304 E CA CA 1_555 A HOH 429 T O HOH 1_555 HYDROLASE/HYDROLASE INHIBITOR selective carboxylate based MMP-12 bifunctional inhibitor, METZINCIN, Zinc protease, HYDROLASE-HYDROLASE INHIBITOR complex MMP12_HUMAN UNP 1 106 P39900 GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAF GPGSGIGGDAHFDEDEFWTTHSGGTNLFLTAVHEIGHSLGLGHSSDPKAVMFPTYKYVDINTFRLSADDIRGIQSLYG 106 263 4I03 106 263 P39900 A 1 2 159 1 initiating methionine MET 105 4I03 A P39900 UNP 1 1 PHE engineered mutation ASP 171 4I03 A P39900 UNP 171 67 1 GLU engineered mutation ALA 219 4I03 A P39900 UNP 219 115 5 2 parallel parallel parallel anti-parallel parallel A LYS 148 A LYS 44 A LYS 151 A LYS 47 A TYR 113 A TYR 9 A ILE 118 A ILE 14 A ILE 159 A ILE 55 A ALA 164 A ALA 60 A ALA 195 A ALA 91 A ASP 198 A ASP 94 A ALA 182 A ALA 78 A ALA 184 A ALA 80 A TRP 203 A TRP 99 A THR 204 A THR 100 A THR 210 A THR 106 A ASN 211 A ASN 107 BINDING SITE FOR RESIDUE ZN A 301 A ZN 301 Software 5 BINDING SITE FOR RESIDUE ZN A 302 A ZN 302 Software 4 BINDING SITE FOR RESIDUE CA A 303 A CA 303 Software 6 BINDING SITE FOR RESIDUE CA A 304 A CA 304 Software 5 BINDING SITE FOR RESIDUE CA A 305 A CA 305 Software 6 BINDING SITE FOR RESIDUE L88 A 306 A L88 306 Software 42 BINDING SITE FOR RESIDUE GOL A 307 A GOL 307 Software 11 BINDING SITE FOR RESIDUE GOL A 308 A GOL 308 Software 9 BINDING SITE FOR RESIDUE GOL A 309 A GOL 309 Software 8 BINDING SITE FOR RESIDUE PGO A 310 A PGO 310 Software 1 BINDING SITE FOR RESIDUE PGO A 311 A PGO 311 Software 6 BINDING SITE FOR RESIDUE DMS A 312 A DMS 312 Software 4 BINDING SITE FOR RESIDUE DMS A 313 A DMS 313 Software 7 BINDING SITE FOR RESIDUE EDO A 314 A EDO 314 Software 4 BINDING SITE FOR RESIDUE EDO A 315 A EDO 315 Software 6 BINDING SITE FOR RESIDUE EDO A 316 A EDO 316 Software 5 BINDING SITE FOR RESIDUE EDO A 317 A EDO 317 Software 3 BINDING SITE FOR RESIDUE PEG A 318 A PEG 318 Software 8 A HIS 218 A HIS 114 5 1_555 A HIS 222 A HIS 118 5 1_555 A HIS 228 A HIS 124 5 1_555 A L88 306 G L88 5 2_656 A L88 306 G L88 5 1_555 A HIS 168 A HIS 64 4 1_555 A ASP 170 A ASP 66 4 1_555 A HIS 183 A HIS 79 4 1_555 A HIS 196 A HIS 92 4 1_555 A ASP 158 A ASP 54 6 1_555 A GLY 190 A GLY 86 6 1_555 A GLY 192 A GLY 88 6 1_555 A ASP 194 A ASP 90 6 1_555 A HOH 414 T HOH 6 1_555 A HOH 419 T HOH 6 1_555 A ASP 124 A ASP 20 5 1_555 A GLU 199 A GLU 95 5 1_555 A GLU 201 A GLU 97 5 1_555 A HOH 420 T HOH 5 1_555 A HOH 429 T HOH 5 1_555 A ASP 175 A ASP 71 6 1_555 A GLY 176 A GLY 72 6 1_555 A GLY 178 A GLY 74 6 1_555 A ILE 180 A ILE 76 6 1_555 A ASP 198 A ASP 94 6 1_555 A GLU 201 A GLU 97 6 1_555 A GLY 179 A GLY 75 42 1_555 A GLY 179 A GLY 75 42 2_656 A ILE 180 A ILE 76 42 1_555 A ILE 180 A ILE 76 42 2_656 A LEU 181 A LEU 77 42 1_555 A LEU 181 A LEU 77 42 2_656 A ALA 182 A ALA 78 42 1_555 A ALA 182 A ALA 78 42 2_656 A HIS 218 A HIS 114 42 1_555 A HIS 218 A HIS 114 42 2_656 A HIS 222 A HIS 118 42 1_555 A HIS 222 A HIS 118 42 2_656 A HIS 228 A HIS 124 42 1_555 A HIS 228 A HIS 124 42 2_656 A PRO 232 A PRO 128 42 1_555 A PRO 232 A PRO 128 42 2_656 A LYS 233 A LYS 129 42 1_555 A LYS 233 A LYS 129 42 2_656 A ALA 234 A ALA 130 42 2_656 A ALA 234 A ALA 130 42 1_555 A VAL 235 A VAL 131 42 1_555 A VAL 235 A VAL 131 42 2_656 A PHE 237 A PHE 133 42 1_555 A PHE 237 A PHE 133 42 2_656 A PRO 238 A PRO 134 42 1_555 A PRO 238 A PRO 134 42 2_656 A THR 239 A THR 135 42 1_555 A THR 239 A THR 135 42 2_656 A TYR 240 A TYR 136 42 1_555 A TYR 240 A TYR 136 42 2_656 A LYS 241 A LYS 137 42 1_555 A LYS 241 A LYS 137 42 2_656 A ZN 301 B ZN 42 2_656 A ZN 301 B ZN 42 1_555 A PGO 311 L PGO 42 2_656 A PGO 311 L PGO 42 1_555 A HOH 401 T HOH 42 2_656 A HOH 401 T HOH 42 1_555 A HOH 513 T HOH 42 2_656 A HOH 513 T HOH 42 1_555 A HOH 521 T HOH 42 2_656 A HOH 521 T HOH 42 1_555 A TYR 113 A TYR 9 11 4_545 A THR 115 A THR 11 11 4_545 A MET 125 A MET 21 11 1_555 A ASN 126 A ASN 22 11 1_555 A ASP 129 A ASP 25 11 1_555 A SER 150 A SER 46 11 4_545 A THR 204 A THR 100 11 1_555 A THR 205 A THR 101 11 1_555 A HOH 435 T HOH 11 1_555 A HOH 454 T HOH 11 1_555 A HOH 468 T HOH 11 4_545 A MET 105 A MET 1 9 1_555 A GLY 106 A GLY 2 9 1_555 A VAL 108 A VAL 4 9 1_555 A ARG 110 A ARG 6 9 1_555 A GLY 176 A GLY 72 9 3_455 A LYS 177 A LYS 73 9 3_455 A SER 260 A SER 156 9 1_555 A LEU 261 A LEU 157 9 1_555 A EDO 315 P EDO 9 3_455 A MET 105 A MET 1 8 1_555 A ASP 171 A ASP 67 8 2_656 A GLY 225 A GLY 121 8 1_555 A LEU 226 A LEU 122 8 1_555 A GLY 227 A GLY 123 8 1_555 A SER 260 A SER 156 8 1_555 A LEU 261 A LEU 157 8 1_555 A HOH 428 T HOH 8 1_555 A ARG 256 A ARG 152 1 1_555 A GLY 179 A GLY 75 6 1_555 A THR 239 A THR 135 6 1_555 A TYR 240 A TYR 136 6 1_555 A L88 306 G L88 6 1_555 A L88 306 G L88 6 2_656 A HOH 500 T HOH 6 1_555 A HIS 172 A HIS 68 4 1_555 A HIS 183 A HIS 79 4 1_555 A ALA 184 A ALA 80 4 1_555 A EDO 316 Q EDO 4 1_555 A ASP 175 A ASP 71 7 2_656 A LYS 177 A LYS 73 7 2_656 A GLY 178 A GLY 74 7 2_656 A GLY 179 A GLY 75 7 2_656 A THR 239 A THR 135 7 1_555 A LYS 241 A LYS 137 7 1_555 A EDO 315 P EDO 7 2_656 A ARG 110 A ARG 6 4 3_545 A ASP 200 A ASP 96 4 1_555 A EDO 315 P EDO 4 1_555 A HOH 505 T HOH 4 1_555 A MET 105 A MET 1 6 3_545 A ASP 175 A ASP 71 6 1_555 A PHE 237 A PHE 133 6 2_656 A GOL 308 I GOL 6 3_545 A DMS 313 N DMS 6 2_656 A EDO 314 O EDO 6 1_555 A ALA 184 A ALA 80 5 1_555 A DMS 312 M DMS 5 1_555 A HOH 401 T HOH 5 1_555 A HOH 421 T HOH 5 1_555 A HOH 503 T HOH 5 1_555 A HIS 168 A HIS 64 3 1_555 A HIS 196 A HIS 92 3 1_555 A HOH 405 T HOH 3 1_555 A THR 145 A THR 41 8 1_555 A PRO 146 A PRO 42 8 1_555 A SER 150 A SER 46 8 2_555 A PHE 202 A PHE 98 8 3_455 A HIS 206 A HIS 102 8 3_455 A HOH 454 T HOH 8 3_455 A HOH 519 T HOH 8 1_555 A HOH 520 T HOH 8 1_555 5 C 1 2 1