0.019581
0.000000
0.000000
0.000000
0.019051
0.000000
0.000000
0.000000
0.008279
0.00000
0.00000
0.00000
Motz, C.
Witte, G.
Hopfner, K.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
51.070
52.490
120.790
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
US
Science
SCIEAS
0038
0036-8075
339
690
693
10.1126/science.1230949
23328395
Paramyxovirus V proteins disrupt the fold of the RNA sensor MDA5 to inhibit antiviral signaling.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2012-05-21
ADSC QUANTUM 315r
Si 111 channel-cut
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
ID23-1
ESRF
0.9792
SYNCHROTRON
ESRF BEAMLINE ID23-1
28586.756
Melanoma differentiation associated protein-5
helicase domain region 641-665 replaced by SGSGS, proteolysis by trypsin during crystallization
1
man
polymer
5844.556
Non-structural protein V
region 55-79 replaced by SGSGSGSGSG, proteolysis by trypsin during crystallization
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
18.015
water
110
nat
water
no
yes
EDLFKDRLLEI(MSE)TNIQTFCQISP(MSE)SDFGTQPYEQWLIQ(MSE)EKKAARDGNRKDRVCAEHLKKYNEALQIN
DTIRRIDAYNHLKTFYNDEKEKKFEVLSGSGSLDESDIFL(MSE)TLFLRNKKILKKLAENPEYENEKLTKLRNTI
(MSE)EHFTRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVGVKAHHLIGAGHSSEFKP(MSE)TQNEQREVISKFRT
GKINLLIATTVAEEGLDIKECNIVIRYGLVT
EDLFKDRLLEIMTNIQTFCQISPMSDFGTQPYEQWLIQMEKKAARDGNRKDRVCAEHLKKYNEALQINDTIRRIDAYNHL
KTFYNDEKEKKFEVLSGSGSLDESDIFLMTLFLRNKKILKKLAENPEYENEKLTKLRNTIMEHFTRTEESARGIIFTKTR
QSAYALSQWITDNKKFAEVGVKAHHLIGAGHSSEFKPMTQNEQREVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYG
LVT
A
polypeptide(L)
no
no
GGFHRREYSIGWVGDEVKVTEWCNPSCSPITAAARRFECTCHQCPVTCSECE
GGFHRREYSIGWVGDEVKVTEWCNPSCSPITAAARRFECTCHQCPVTCSECE
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
pigs,swine,wild boar
sample
1
95
MDA5
9823
Sus scrofa
562
Escherichia coli
BL21(DE3) Rosetta
pigs,swine,wild boar
sample
101
243
MDA5
9823
Sus scrofa
562
Escherichia coli
BL21(DE3) Rosetta
SV5
W3
sample
P/V
11208
Simian virus 5
562
Escherichia coli
BL21(DE3) Rosetta
1
2.35
47.68
VAPOR DIFFUSION, HANGING DROP
7.5
100mM HEPES pH7.5
18% (w/v) PEG1500
trace amounts of trypsin
, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
entity_src_gen
pdbx_unobs_or_zero_occ_atoms
software
repository
Initial release
Database references
Advisory
Refinement description
Source and taxonomy
1
0
2013-01-30
1
1
2013-02-20
1
2
2017-07-26
HELIX
DETERMINATION METHOD: AUTHOR DETERMINED
RCSB
Y
RCSB
2012-11-21
REL
REL
ZN
ZINC ION
HOH
water
ZN
1
3
ZN
ZN
301
B
ZN
2
3
ZN
ZN
302
B
HOH
1
4
HOH
HOH
901
A
HOH
2
4
HOH
HOH
902
A
HOH
3
4
HOH
HOH
903
A
HOH
4
4
HOH
HOH
904
A
HOH
5
4
HOH
HOH
905
A
HOH
6
4
HOH
HOH
906
A
HOH
7
4
HOH
HOH
907
A
HOH
8
4
HOH
HOH
908
A
HOH
9
4
HOH
HOH
909
A
HOH
10
4
HOH
HOH
910
A
HOH
11
4
HOH
HOH
911
A
HOH
12
4
HOH
HOH
912
A
HOH
13
4
HOH
HOH
913
A
HOH
14
4
HOH
HOH
914
A
HOH
15
4
HOH
HOH
915
A
HOH
16
4
HOH
HOH
916
A
HOH
17
4
HOH
HOH
917
A
HOH
18
4
HOH
HOH
918
A
HOH
20
4
HOH
HOH
919
A
HOH
21
4
HOH
HOH
920
A
HOH
22
4
HOH
HOH
921
A
HOH
23
4
HOH
HOH
922
A
HOH
24
4
HOH
HOH
923
A
HOH
25
4
HOH
HOH
924
A
HOH
26
4
HOH
HOH
925
A
HOH
27
4
HOH
HOH
926
A
HOH
28
4
HOH
HOH
927
A
HOH
29
4
HOH
HOH
928
A
HOH
30
4
HOH
HOH
929
A
HOH
31
4
HOH
HOH
930
A
HOH
32
4
HOH
HOH
931
A
HOH
33
4
HOH
HOH
932
A
HOH
34
4
HOH
HOH
933
A
HOH
36
4
HOH
HOH
934
A
HOH
37
4
HOH
HOH
935
A
HOH
38
4
HOH
HOH
936
A
HOH
39
4
HOH
HOH
937
A
HOH
40
4
HOH
HOH
938
A
HOH
41
4
HOH
HOH
939
A
HOH
42
4
HOH
HOH
940
A
HOH
43
4
HOH
HOH
941
A
HOH
44
4
HOH
HOH
942
A
HOH
45
4
HOH
HOH
943
A
HOH
46
4
HOH
HOH
944
A
HOH
47
4
HOH
HOH
945
A
HOH
48
4
HOH
HOH
946
A
HOH
50
4
HOH
HOH
947
A
HOH
51
4
HOH
HOH
948
A
HOH
52
4
HOH
HOH
949
A
HOH
53
4
HOH
HOH
950
A
HOH
54
4
HOH
HOH
951
A
HOH
55
4
HOH
HOH
952
A
HOH
56
4
HOH
HOH
953
A
HOH
57
4
HOH
HOH
954
A
HOH
58
4
HOH
HOH
955
A
HOH
59
4
HOH
HOH
956
A
HOH
60
4
HOH
HOH
957
A
HOH
61
4
HOH
HOH
958
A
HOH
62
4
HOH
HOH
959
A
HOH
63
4
HOH
HOH
960
A
HOH
64
4
HOH
HOH
961
A
HOH
65
4
HOH
HOH
962
A
HOH
66
4
HOH
HOH
963
A
HOH
67
4
HOH
HOH
964
A
HOH
68
4
HOH
HOH
965
A
HOH
69
4
HOH
HOH
966
A
HOH
70
4
HOH
HOH
967
A
HOH
71
4
HOH
HOH
968
A
HOH
72
4
HOH
HOH
969
A
HOH
73
4
HOH
HOH
970
A
HOH
74
4
HOH
HOH
971
A
HOH
75
4
HOH
HOH
972
A
HOH
81
4
HOH
HOH
973
A
HOH
82
4
HOH
HOH
974
A
HOH
83
4
HOH
HOH
975
A
HOH
84
4
HOH
HOH
976
A
HOH
85
4
HOH
HOH
977
A
HOH
86
4
HOH
HOH
978
A
HOH
87
4
HOH
HOH
979
A
HOH
88
4
HOH
HOH
980
A
HOH
89
4
HOH
HOH
981
A
HOH
90
4
HOH
HOH
982
A
HOH
91
4
HOH
HOH
983
A
HOH
92
4
HOH
HOH
984
A
HOH
93
4
HOH
HOH
985
A
HOH
94
4
HOH
HOH
986
A
HOH
95
4
HOH
HOH
987
A
HOH
97
4
HOH
HOH
988
A
HOH
100
4
HOH
HOH
989
A
HOH
101
4
HOH
HOH
990
A
HOH
102
4
HOH
HOH
991
A
HOH
103
4
HOH
HOH
992
A
HOH
104
4
HOH
HOH
993
A
HOH
105
4
HOH
HOH
994
A
HOH
106
4
HOH
HOH
995
A
HOH
107
4
HOH
HOH
996
A
HOH
109
4
HOH
HOH
997
A
HOH
110
4
HOH
HOH
998
A
HOH
19
4
HOH
HOH
401
B
HOH
35
4
HOH
HOH
402
B
HOH
49
4
HOH
HOH
403
B
HOH
76
4
HOH
HOH
404
B
HOH
77
4
HOH
HOH
405
B
HOH
78
4
HOH
HOH
406
B
HOH
79
4
HOH
HOH
407
B
HOH
80
4
HOH
HOH
408
B
HOH
96
4
HOH
HOH
409
B
HOH
98
4
HOH
HOH
410
B
HOH
99
4
HOH
HOH
411
B
HOH
108
4
HOH
HOH
412
B
GLU
546
n
1
GLU
546
A
ASP
547
n
2
ASP
547
A
LEU
548
n
3
LEU
548
A
PHE
549
n
4
PHE
549
A
LYS
550
n
5
LYS
550
A
ASP
551
n
6
ASP
551
A
ARG
552
n
7
ARG
552
A
LEU
553
n
8
LEU
553
A
LEU
554
n
9
LEU
554
A
GLU
555
n
10
GLU
555
A
ILE
556
n
11
ILE
556
A
MSE
557
n
12
MSE
557
A
THR
558
n
13
THR
558
A
ASN
559
n
14
ASN
559
A
ILE
560
n
15
ILE
560
A
GLN
561
n
16
GLN
561
A
THR
562
n
17
THR
562
A
PHE
563
n
18
PHE
563
A
CYS
564
n
19
CYS
564
A
GLN
565
n
20
GLN
565
A
ILE
566
n
21
ILE
566
A
SER
567
n
22
SER
567
A
PRO
568
n
23
PRO
568
A
MSE
569
n
24
MSE
569
A
SER
570
n
25
SER
570
A
ASP
571
n
26
ASP
571
A
PHE
572
n
27
PHE
572
A
GLY
573
n
28
GLY
573
A
THR
574
n
29
THR
574
A
GLN
575
n
30
GLN
575
A
PRO
576
n
31
PRO
576
A
TYR
577
n
32
TYR
577
A
GLU
578
n
33
GLU
578
A
GLN
579
n
34
GLN
579
A
TRP
580
n
35
TRP
580
A
LEU
581
n
36
LEU
581
A
ILE
582
n
37
ILE
582
A
GLN
583
n
38
GLN
583
A
MSE
584
n
39
MSE
584
A
GLU
585
n
40
GLU
585
A
LYS
586
n
41
LYS
586
A
LYS
587
n
42
LYS
587
A
ALA
588
n
43
ALA
588
A
ALA
589
n
44
ALA
589
A
ARG
590
n
45
ARG
590
A
ASP
591
n
46
ASP
591
A
GLY
592
n
47
GLY
592
A
ASN
593
n
48
ASN
593
A
ARG
594
n
49
ARG
594
A
LYS
595
n
50
LYS
595
A
ASP
596
n
51
ASP
596
A
ARG
597
n
52
ARG
597
A
VAL
598
n
53
VAL
598
A
CYS
599
n
54
CYS
599
A
ALA
600
n
55
ALA
600
A
GLU
601
n
56
GLU
601
A
HIS
602
n
57
HIS
602
A
LEU
603
n
58
LEU
603
A
LYS
604
n
59
LYS
604
A
LYS
605
n
60
LYS
605
A
TYR
606
n
61
TYR
606
A
ASN
607
n
62
ASN
607
A
GLU
608
n
63
GLU
608
A
ALA
609
n
64
ALA
609
A
LEU
610
n
65
LEU
610
A
GLN
611
n
66
GLN
611
A
ILE
612
n
67
ILE
612
A
ASN
613
n
68
ASN
613
A
ASP
614
n
69
ASP
614
A
THR
615
n
70
THR
615
A
ILE
616
n
71
ILE
616
A
ARG
617
n
72
ARG
617
A
ARG
618
n
73
ARG
618
A
ILE
619
n
74
ILE
619
A
ASP
620
n
75
ASP
620
A
ALA
621
n
76
ALA
621
A
TYR
622
n
77
TYR
622
A
ASN
623
n
78
ASN
623
A
HIS
624
n
79
HIS
624
A
LEU
625
n
80
LEU
625
A
LYS
626
n
81
LYS
626
A
THR
627
n
82
THR
627
A
PHE
628
n
83
PHE
628
A
TYR
629
n
84
TYR
629
A
ASN
630
n
85
ASN
630
A
ASP
631
n
86
ASP
631
A
GLU
632
n
87
GLU
632
A
LYS
633
n
88
LYS
633
A
GLU
634
n
89
GLU
634
A
LYS
635
n
90
LYS
635
A
LYS
636
n
91
LYS
636
A
PHE
637
n
92
PHE
637
A
GLU
638
n
93
GLU
638
A
n
94
639
A
n
95
640
A
n
96
661
A
n
97
662
A
n
98
663
A
GLY
664
n
99
GLY
664
A
SER
665
n
100
SER
665
A
LEU
666
n
101
LEU
666
A
ASP
667
n
102
ASP
667
A
GLU
668
n
103
GLU
668
A
SER
669
n
104
SER
669
A
ASP
670
n
105
ASP
670
A
ILE
671
n
106
ILE
671
A
PHE
672
n
107
PHE
672
A
LEU
673
n
108
LEU
673
A
MSE
674
n
109
MSE
674
A
THR
675
n
110
THR
675
A
LEU
676
n
111
LEU
676
A
PHE
677
n
112
PHE
677
A
LEU
678
n
113
LEU
678
A
ARG
679
n
114
ARG
679
A
ASN
680
n
115
ASN
680
A
LYS
681
n
116
LYS
681
A
LYS
682
n
117
LYS
682
A
ILE
683
n
118
ILE
683
A
LEU
684
n
119
LEU
684
A
LYS
685
n
120
LYS
685
A
LYS
686
n
121
LYS
686
A
LEU
687
n
122
LEU
687
A
ALA
688
n
123
ALA
688
A
GLU
689
n
124
GLU
689
A
ASN
690
n
125
ASN
690
A
PRO
691
n
126
PRO
691
A
GLU
692
n
127
GLU
692
A
TYR
693
n
128
TYR
693
A
GLU
694
n
129
GLU
694
A
ASN
695
n
130
ASN
695
A
GLU
696
n
131
GLU
696
A
LYS
697
n
132
LYS
697
A
LEU
698
n
133
LEU
698
A
THR
699
n
134
THR
699
A
LYS
700
n
135
LYS
700
A
LEU
701
n
136
LEU
701
A
ARG
702
n
137
ARG
702
A
ASN
703
n
138
ASN
703
A
THR
704
n
139
THR
704
A
ILE
705
n
140
ILE
705
A
MSE
706
n
141
MSE
706
A
GLU
707
n
142
GLU
707
A
HIS
708
n
143
HIS
708
A
PHE
709
n
144
PHE
709
A
THR
710
n
145
THR
710
A
ARG
711
n
146
ARG
711
A
THR
712
n
147
THR
712
A
GLU
713
n
148
GLU
713
A
GLU
714
n
149
GLU
714
A
SER
715
n
150
SER
715
A
ALA
716
n
151
ALA
716
A
ARG
717
n
152
ARG
717
A
GLY
718
n
153
GLY
718
A
ILE
719
n
154
ILE
719
A
ILE
720
n
155
ILE
720
A
PHE
721
n
156
PHE
721
A
THR
722
n
157
THR
722
A
LYS
723
n
158
LYS
723
A
THR
724
n
159
THR
724
A
ARG
725
n
160
ARG
725
A
GLN
726
n
161
GLN
726
A
SER
727
n
162
SER
727
A
ALA
728
n
163
ALA
728
A
TYR
729
n
164
TYR
729
A
ALA
730
n
165
ALA
730
A
LEU
731
n
166
LEU
731
A
SER
732
n
167
SER
732
A
GLN
733
n
168
GLN
733
A
TRP
734
n
169
TRP
734
A
ILE
735
n
170
ILE
735
A
THR
736
n
171
THR
736
A
ASP
737
n
172
ASP
737
A
ASN
738
n
173
ASN
738
A
LYS
739
n
174
LYS
739
A
LYS
740
n
175
LYS
740
A
PHE
741
n
176
PHE
741
A
ALA
742
n
177
ALA
742
A
GLU
743
n
178
GLU
743
A
VAL
744
n
179
VAL
744
A
GLY
745
n
180
GLY
745
A
VAL
746
n
181
VAL
746
A
LYS
747
n
182
LYS
747
A
ALA
748
n
183
ALA
748
A
HIS
749
n
184
HIS
749
A
HIS
750
n
185
HIS
750
A
LEU
751
n
186
LEU
751
A
ILE
752
n
187
ILE
752
A
GLY
753
n
188
GLY
753
A
ALA
754
n
189
ALA
754
A
GLY
755
n
190
GLY
755
A
HIS
756
n
191
HIS
756
A
SER
757
n
192
SER
757
A
SER
758
n
193
SER
758
A
GLU
759
n
194
GLU
759
A
PHE
760
n
195
PHE
760
A
LYS
761
n
196
LYS
761
A
PRO
762
n
197
PRO
762
A
MSE
763
n
198
MSE
763
A
THR
764
n
199
THR
764
A
GLN
765
n
200
GLN
765
A
ASN
766
n
201
ASN
766
A
GLU
767
n
202
GLU
767
A
GLN
768
n
203
GLN
768
A
ARG
769
n
204
ARG
769
A
GLU
770
n
205
GLU
770
A
VAL
771
n
206
VAL
771
A
ILE
772
n
207
ILE
772
A
SER
773
n
208
SER
773
A
LYS
774
n
209
LYS
774
A
PHE
775
n
210
PHE
775
A
ARG
776
n
211
ARG
776
A
THR
777
n
212
THR
777
A
GLY
778
n
213
GLY
778
A
LYS
779
n
214
LYS
779
A
ILE
780
n
215
ILE
780
A
ASN
781
n
216
ASN
781
A
LEU
782
n
217
LEU
782
A
LEU
783
n
218
LEU
783
A
ILE
784
n
219
ILE
784
A
ALA
785
n
220
ALA
785
A
THR
786
n
221
THR
786
A
THR
787
n
222
THR
787
A
VAL
788
n
223
VAL
788
A
ALA
789
n
224
ALA
789
A
GLU
790
n
225
GLU
790
A
GLU
791
n
226
GLU
791
A
GLY
792
n
227
GLY
792
A
LEU
793
n
228
LEU
793
A
ASP
794
n
229
ASP
794
A
ILE
795
n
230
ILE
795
A
LYS
796
n
231
LYS
796
A
GLU
797
n
232
GLU
797
A
CYS
798
n
233
CYS
798
A
ASN
799
n
234
ASN
799
A
ILE
800
n
235
ILE
800
A
VAL
801
n
236
VAL
801
A
ILE
802
n
237
ILE
802
A
ARG
803
n
238
ARG
803
A
TYR
804
n
239
TYR
804
A
GLY
805
n
240
GLY
805
A
LEU
806
n
241
LEU
806
A
VAL
807
n
242
VAL
807
A
THR
808
n
243
THR
808
A
GLY
168
n
1
GLY
168
B
GLY
169
n
2
GLY
169
B
PHE
170
n
3
PHE
170
B
HIS
171
n
4
HIS
171
B
ARG
172
n
5
ARG
172
B
ARG
173
n
6
ARG
173
B
GLU
174
n
7
GLU
174
B
TYR
175
n
8
TYR
175
B
SER
176
n
9
SER
176
B
ILE
177
n
10
ILE
177
B
GLY
178
n
11
GLY
178
B
TRP
179
n
12
TRP
179
B
VAL
180
n
13
VAL
180
B
GLY
181
n
14
GLY
181
B
ASP
182
n
15
ASP
182
B
GLU
183
n
16
GLU
183
B
VAL
184
n
17
VAL
184
B
LYS
185
n
18
LYS
185
B
VAL
186
n
19
VAL
186
B
THR
187
n
20
THR
187
B
GLU
188
n
21
GLU
188
B
TRP
189
n
22
TRP
189
B
CYS
190
n
23
CYS
190
B
ASN
191
n
24
ASN
191
B
PRO
192
n
25
PRO
192
B
SER
193
n
26
SER
193
B
CYS
194
n
27
CYS
194
B
SER
195
n
28
SER
195
B
PRO
196
n
29
PRO
196
B
ILE
197
n
30
ILE
197
B
THR
198
n
31
THR
198
B
ALA
199
n
32
ALA
199
B
ALA
200
n
33
ALA
200
B
ALA
201
n
34
ALA
201
B
ARG
202
n
35
ARG
202
B
ARG
203
n
36
ARG
203
B
PHE
204
n
37
PHE
204
B
GLU
205
n
38
GLU
205
B
CYS
206
n
39
CYS
206
B
THR
207
n
40
THR
207
B
CYS
208
n
41
CYS
208
B
HIS
209
n
42
HIS
209
B
GLN
210
n
43
GLN
210
B
CYS
211
n
44
CYS
211
B
PRO
212
n
45
PRO
212
B
VAL
213
n
46
VAL
213
B
THR
214
n
47
THR
214
B
CYS
215
n
48
CYS
215
B
SER
216
n
49
SER
216
B
GLU
217
n
50
GLU
217
B
CYS
218
n
51
CYS
218
B
GLU
219
n
52
GLU
219
B
author_and_software_defined_assembly
PISA
2
dimeric
2170
-9
15230
B
HIS
171
B
ND1
HIS
4
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
218
B
SG
CYS
51
1_555
112.4
B
HIS
171
B
ND1
HIS
4
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
215
B
SG
CYS
48
1_555
96.3
B
CYS
218
B
SG
CYS
51
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
215
B
SG
CYS
48
1_555
118.5
B
HIS
171
B
ND1
HIS
4
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
190
B
SG
CYS
23
1_555
110.0
B
CYS
218
B
SG
CYS
51
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
190
B
SG
CYS
23
1_555
113.4
B
CYS
215
B
SG
CYS
48
1_555
B
ZN
302
D
ZN
ZN
1_555
B
CYS
190
B
SG
CYS
23
1_555
104.8
B
CYS
211
B
SG
CYS
44
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
194
B
SG
CYS
27
1_555
121.0
B
CYS
211
B
SG
CYS
44
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
206
B
SG
CYS
39
1_555
113.6
B
CYS
194
B
SG
CYS
27
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
206
B
SG
CYS
39
1_555
109.1
B
CYS
211
B
SG
CYS
44
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
208
B
SG
CYS
41
1_555
95.2
B
CYS
194
B
SG
CYS
27
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
208
B
SG
CYS
41
1_555
109.9
B
CYS
206
B
SG
CYS
39
1_555
B
ZN
301
C
ZN
ZN
1_555
B
CYS
208
B
SG
CYS
41
1_555
106.1
A
MSE
557
SELENOMETHIONINE
A
MSE
12
MET
A
MSE
569
SELENOMETHIONINE
A
MSE
24
MET
A
MSE
584
SELENOMETHIONINE
A
MSE
39
MET
A
MSE
674
SELENOMETHIONINE
A
MSE
109
MET
A
MSE
706
SELENOMETHIONINE
A
MSE
141
MET
A
MSE
763
SELENOMETHIONINE
A
MSE
198
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
751
A
N
LEU
186
A
O
ILE
784
A
O
ILE
219
A
O
LEU
783
A
O
LEU
218
A
N
ILE
720
A
N
ILE
155
A
N
PHE
721
A
N
PHE
156
A
O
ILE
802
A
O
ILE
237
A
N
ARG
803
A
N
ARG
238
B
O
ILE
177
B
O
ILE
10
B
N
ARG
172
B
N
ARG
5
B
O
ASN
191
B
O
ASN
24
1
A
VAL
639
A
VAL
94
1
Y
1
A
LEU
640
A
LEU
95
1
Y
1
A
SER
661
A
SER
96
1
Y
1
A
GLY
662
A
GLY
97
1
Y
1
A
SER
663
A
SER
98
1
Y
1
A
ILE
616
-129.47
-154.69
1
A
SER
665
-77.43
43.31
1
A
GLU
713
53.04
-128.13
1
A
ALA
789
-145.78
-25.59
1
A
GLU
790
-48.48
-16.56
0.2296
0.1792
0.1817
0.1817
2.293
48.141
1427
27871
27856
5.12
99.18
0.23
RANDOM
1
0
SAD
21.15
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.293
48.141
110
2471
2
0
2359
0.009
2422
1.173
3259
16.027
929
0.077
355
0.004
421
0.2425
0.2226
2.3753
116
2467
93.00
0.3108
0.2261
2.4704
137
2673
100.00
0.2963
0.2123
2.5828
172
2624
100.00
0.2897
0.2192
2.7190
177
2662
100.00
0.2581
0.2074
2.8893
152
2638
100.00
0.2383
0.1917
3.1124
150
2648
100.00
0.2035
0.1706
3.4255
134
2694
100.00
0.2026
0.1477
3.9210
157
2656
100.00
0.1820
0.1337
4.9393
132
2668
100.00
0.2299
0.1986
48.1516
100
2699
99.00
39.03
2.293
50
4I1S
27871
0
0
0.137
1
13.64
7.17
99.2
2.29
2.35
2.58
1874
0.838
1
6.77
83.8
data collection
DNA
phasing
SHARP
refinement
PHENIX
(phenix.refine: 1.8.1_1168)
data reduction
XDS
data scaling
XSCALE
Melanoma differentiation associated protein-5, Non-structural protein V
Melanoma differentiation associated protein-5 Helicase domain complex with inhibitor Non-structural protein V
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
the complete biological assembly is present in the uploaded PDB:
one chain A and one chain B in the unit cell (one heterodimer/ASU in P212121)
A
ASP
547
A
ASP
2
HELX_P
A
GLN
565
A
GLN
20
1
1
19
A
THR
574
A
THR
29
HELX_P
A
ASP
591
A
ASP
46
1
2
18
A
ARG
618
A
ARG
73
HELX_P
A
PHE
637
A
PHE
92
1
4
20
A
ASP
667
A
ASP
102
HELX_P
A
ASN
690
A
ASN
125
1
5
24
A
THR
724
A
THR
159
HELX_P
A
ASP
737
A
ASP
172
1
7
14
A
THR
764
A
THR
199
HELX_P
A
THR
777
A
THR
212
1
9
14
A
ALA
789
A
ALA
224
HELX_P
A
LEU
793
A
LEU
228
5
10
5
covale
1.322
A
ILE
556
A
C
ILE
11
1_555
A
MSE
557
A
N
MSE
12
1_555
covale
1.328
A
MSE
557
A
C
MSE
12
1_555
A
THR
558
A
N
THR
13
1_555
covale
1.323
A
PRO
568
A
C
PRO
23
1_555
A
MSE
569
A
N
MSE
24
1_555
covale
1.328
A
MSE
569
A
C
MSE
24
1_555
A
SER
570
A
N
SER
25
1_555
covale
1.333
A
GLN
583
A
C
GLN
38
1_555
A
MSE
584
A
N
MSE
39
1_555
covale
1.326
A
MSE
584
A
C
MSE
39
1_555
A
GLU
585
A
N
GLU
40
1_555
covale
1.329
A
LEU
673
A
C
LEU
108
1_555
A
MSE
674
A
N
MSE
109
1_555
covale
1.329
A
MSE
674
A
C
MSE
109
1_555
A
THR
675
A
N
THR
110
1_555
covale
1.326
A
ILE
705
A
C
ILE
140
1_555
A
MSE
706
A
N
MSE
141
1_555
covale
1.328
A
MSE
706
A
C
MSE
141
1_555
A
GLU
707
A
N
GLU
142
1_555
covale
1.324
A
PRO
762
A
C
PRO
197
1_555
A
MSE
763
A
N
MSE
198
1_555
covale
1.336
A
MSE
763
A
C
MSE
198
1_555
A
THR
764
A
N
THR
199
1_555
metalc
1.959
B
HIS
171
B
ND1
HIS
4
1_555
B
ZN
302
D
ZN
ZN
1_555
metalc
2.220
B
CYS
218
B
SG
CYS
51
1_555
B
ZN
302
D
ZN
ZN
1_555
metalc
2.223
B
CYS
215
B
SG
CYS
48
1_555
B
ZN
302
D
ZN
ZN
1_555
metalc
2.256
B
CYS
211
B
SG
CYS
44
1_555
B
ZN
301
C
ZN
ZN
1_555
metalc
2.312
B
CYS
194
B
SG
CYS
27
1_555
B
ZN
301
C
ZN
ZN
1_555
metalc
2.364
B
CYS
206
B
SG
CYS
39
1_555
B
ZN
301
C
ZN
ZN
1_555
metalc
2.376
B
CYS
208
B
SG
CYS
41
1_555
B
ZN
301
C
ZN
ZN
1_555
metalc
2.439
B
CYS
190
B
SG
CYS
23
1_555
B
ZN
302
D
ZN
ZN
1_555
Hydrolase/Hydrolase Inhibitor
SF2-ATPase, Helicase, Hydrolase-Hydrolase Inhibitor complex
A7LCX1_PIG
UNP
1
303
A7LCX1
EDLFKDRLLEIMTNIQTFCQISPMSDFGTQPYEQWLIQMEKKAARDGNRKDRVCAEHLKKYNEALQINDTIRRIDAYNHL
KTFYNDEKEKKFEVL
A7LCX1_PIG
UNP
1
666
A7LCX1
LDESDIFLMTLFLRNKKILKKLAENPEYENEKLTKLRNTIMEHFTRTEESARGIIFTKTRQSAYALSQWITDNKKFAEVG
VKAHHLIGAGHSSEFKPMTQNEQREVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLVT
V_SV5
UNP
2
1
P11207
GGFHRREYSIGWVGDEVKVTEWCNPSCSPITAAARRFECTCHQCPVTCSECE
303
397
4I1S
546
640
A7LCX1
A
1
1
95
666
808
4I1S
666
808
A7LCX1
A
2
101
243
1
52
4I1S
168
219
P11207
B
3
1
52
1
LINKER
SER
661
4I1S
A
A7LCX1
UNP
96
1
LINKER
GLY
662
4I1S
A
A7LCX1
UNP
97
1
LINKER
SER
663
4I1S
A
A7LCX1
UNP
98
1
LINKER
GLY
664
4I1S
A
A7LCX1
UNP
99
1
LINKER
SER
665
4I1S
A
A7LCX1
UNP
100
6
parallel
parallel
parallel
parallel
anti-parallel
A
ALA
748
A
ALA
183
A
LEU
751
A
LEU
186
A
LEU
782
A
LEU
217
A
THR
786
A
THR
221
A
GLY
718
A
GLY
153
A
THR
722
A
THR
157
A
ILE
800
A
ILE
235
A
TYR
804
A
TYR
239
B
HIS
171
B
HIS
4
B
VAL
180
B
VAL
13
B
GLU
183
B
GLU
16
B
PRO
192
B
PRO
25
BINDING SITE FOR RESIDUE ZN B 301
Software
4
BINDING SITE FOR RESIDUE ZN B 302
Software
4
B
CYS
194
B
CYS
27
4
1_555
B
CYS
206
B
CYS
39
4
1_555
B
CYS
208
B
CYS
41
4
1_555
B
CYS
211
B
CYS
44
4
1_555
B
HIS
171
B
HIS
4
4
1_555
B
CYS
190
B
CYS
23
4
1_555
B
CYS
215
B
CYS
48
4
1_555
B
CYS
218
B
CYS
51
4
1_555
19
P 21 21 21