0.008631
0.004983
0.000000
-0.000000
0.009966
0.000000
0.000000
-0.000000
0.010912
0.000000
0.000000
0.000000
Seattle Structural Genomics Center for Infectious Disease (SSGCID)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
115.860
115.860
91.640
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
R
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
N
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
TO BE PUBLISHED
0353
Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP
10.2210/pdb4i1v/pdb
pdb_00004i1v
100
1
CCD
2012-10-18
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9774
1.0
5.0.1
ALS
0.9774
SYNCHROTRON
ALS BEAMLINE 5.0.1
22948.172
Dephospho-CoA kinase
2.7.1.24
2
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
2
syn
non-polymer
18.015
water
53
nat
water
Dephospho-CoA kinase, Dephosphocoenzyme A kinase
no
no
MAHHHHHHMYAIGLTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRAL
IFSDEDARRRLEAITHPLIRAETEREARDAQGPYVIFVVPLLVESRNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQV
EAIIARQATREARLAAADDVIVNDAATPDALAVQVDALHQRYLAFAAAKH
MAHHHHHHMYAIGLTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRAL
IFSDEDARRRLEAITHPLIRAETEREARDAQGPYVIFVVPLLVESRNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQV
EAIIARQATREARLAAADDVIVNDAATPDALAVQVDALHQRYLAFAAAKH
A,B
SSGCID-BuviA.00139.a
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
G4
sample
Bcep1808_0550, coaE
269482
Burkholderia vietnamiensis
562
Escherichia coli
plasmid
pAVA0421
1
3.87
68.21
VAPOR DIFFUSION, SITTING DROP
6.5
BuviA.00139.a.B1 PS01581 at 26.1 mg/mL with 2 mM ADP against Morpheus screen condition F1, 10% PEG 20,000, 20% PEG 550 MME, 0.02 M each monosaccharide, 0.1 M MES/imidazole pH 6.5, crystal tracking ID 237917f1, unique puck ID beh5-16, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Seattle Structural Genomics Center for Infectious Disease
SSGCID
NIAID, National Institute of Allergy and Infectious Diseases
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ncs_dom_lim
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-01-09
1
1
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
apo/sulfate bound structure
Y
RCSB
Y
RCSB
2012-11-21
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
4I1U
PDB
experimental model
ADP
211
2
ADP
ADP
301
A
ADP
211
2
ADP
ADP
301
B
HOH
1
3
HOH
HOH
401
A
HOH
2
3
HOH
HOH
402
A
HOH
3
3
HOH
HOH
403
A
HOH
4
3
HOH
HOH
404
A
HOH
5
3
HOH
HOH
405
A
HOH
8
3
HOH
HOH
406
A
HOH
9
3
HOH
HOH
407
A
HOH
15
3
HOH
HOH
408
A
HOH
16
3
HOH
HOH
409
A
HOH
17
3
HOH
HOH
410
A
HOH
18
3
HOH
HOH
411
A
HOH
20
3
HOH
HOH
412
A
HOH
22
3
HOH
HOH
413
A
HOH
23
3
HOH
HOH
414
A
HOH
24
3
HOH
HOH
415
A
HOH
25
3
HOH
HOH
416
A
HOH
34
3
HOH
HOH
417
A
HOH
35
3
HOH
HOH
418
A
HOH
36
3
HOH
HOH
419
A
HOH
37
3
HOH
HOH
420
A
HOH
38
3
HOH
HOH
421
A
HOH
43
3
HOH
HOH
422
A
HOH
44
3
HOH
HOH
423
A
HOH
45
3
HOH
HOH
424
A
HOH
46
3
HOH
HOH
425
A
HOH
47
3
HOH
HOH
426
A
HOH
48
3
HOH
HOH
427
A
HOH
50
3
HOH
HOH
428
A
HOH
51
3
HOH
HOH
429
A
HOH
52
3
HOH
HOH
430
A
HOH
53
3
HOH
HOH
431
A
HOH
6
3
HOH
HOH
401
B
HOH
7
3
HOH
HOH
402
B
HOH
10
3
HOH
HOH
403
B
HOH
11
3
HOH
HOH
404
B
HOH
12
3
HOH
HOH
405
B
HOH
13
3
HOH
HOH
406
B
HOH
14
3
HOH
HOH
407
B
HOH
19
3
HOH
HOH
408
B
HOH
21
3
HOH
HOH
409
B
HOH
26
3
HOH
HOH
410
B
HOH
27
3
HOH
HOH
411
B
HOH
28
3
HOH
HOH
412
B
HOH
29
3
HOH
HOH
413
B
HOH
30
3
HOH
HOH
414
B
HOH
31
3
HOH
HOH
415
B
HOH
32
3
HOH
HOH
416
B
HOH
33
3
HOH
HOH
417
B
HOH
39
3
HOH
HOH
418
B
HOH
40
3
HOH
HOH
419
B
HOH
41
3
HOH
HOH
420
B
HOH
42
3
HOH
HOH
421
B
HOH
49
3
HOH
HOH
422
B
3.000
3.000
37.740
37.740
Phaser MODE: MR_AUTO
n
1
-7
A
n
2
-6
A
n
3
-5
A
HIS
-4
n
4
HIS
-4
A
HIS
-3
n
5
HIS
-3
A
HIS
-2
n
6
HIS
-2
A
HIS
-1
n
7
HIS
-1
A
HIS
0
n
8
HIS
0
A
MET
1
n
9
MET
1
A
TYR
2
n
10
TYR
2
A
ALA
3
n
11
ALA
3
A
ILE
4
n
12
ILE
4
A
GLY
5
n
13
GLY
5
A
LEU
6
n
14
LEU
6
A
THR
7
n
15
THR
7
A
GLY
8
n
16
GLY
8
A
GLY
9
n
17
GLY
9
A
ILE
10
n
18
ILE
10
A
GLY
11
n
19
GLY
11
A
SER
12
n
20
SER
12
A
GLY
13
n
21
GLY
13
A
LYS
14
n
22
LYS
14
A
THR
15
n
23
THR
15
A
THR
16
n
24
THR
16
A
VAL
17
n
25
VAL
17
A
ALA
18
n
26
ALA
18
A
ASP
19
n
27
ASP
19
A
LEU
20
n
28
LEU
20
A
PHE
21
n
29
PHE
21
A
ALA
22
n
30
ALA
22
A
ALA
23
n
31
ALA
23
A
ARG
24
n
32
ARG
24
A
GLY
25
n
33
GLY
25
A
ALA
26
n
34
ALA
26
A
SER
27
n
35
SER
27
A
LEU
28
n
36
LEU
28
A
VAL
29
n
37
VAL
29
A
ASP
30
n
38
ASP
30
A
THR
31
n
39
THR
31
A
ASP
32
n
40
ASP
32
A
LEU
33
n
41
LEU
33
A
ILE
34
n
42
ILE
34
A
ALA
35
n
43
ALA
35
A
HIS
36
n
44
HIS
36
A
ARG
37
n
45
ARG
37
A
ILE
38
n
46
ILE
38
A
THR
39
n
47
THR
39
A
ALA
40
n
48
ALA
40
A
PRO
41
n
49
PRO
41
A
ALA
42
n
50
ALA
42
A
GLY
43
n
51
GLY
43
A
LEU
44
n
52
LEU
44
A
ALA
45
n
53
ALA
45
A
MET
46
n
54
MET
46
A
PRO
47
n
55
PRO
47
A
ALA
48
n
56
ALA
48
A
ILE
49
n
57
ILE
49
A
GLU
50
n
58
GLU
50
A
GLN
51
n
59
GLN
51
A
THR
52
n
60
THR
52
A
PHE
53
n
61
PHE
53
A
GLY
54
n
62
GLY
54
A
PRO
55
n
63
PRO
55
A
ALA
56
n
64
ALA
56
A
PHE
57
n
65
PHE
57
A
VAL
58
n
66
VAL
58
A
ALA
59
n
67
ALA
59
A
ALA
60
n
68
ALA
60
A
ASP
61
n
69
ASP
61
A
GLY
62
n
70
GLY
62
A
SER
63
n
71
SER
63
A
LEU
64
n
72
LEU
64
A
ASP
65
n
73
ASP
65
A
ARG
66
n
74
ARG
66
A
ALA
67
n
75
ALA
67
A
ARG
68
n
76
ARG
68
A
MET
69
n
77
MET
69
A
ARG
70
n
78
ARG
70
A
ALA
71
n
79
ALA
71
A
LEU
72
n
80
LEU
72
A
ILE
73
n
81
ILE
73
A
PHE
74
n
82
PHE
74
A
SER
75
n
83
SER
75
A
ASP
76
n
84
ASP
76
A
GLU
77
n
85
GLU
77
A
ASP
78
n
86
ASP
78
A
ALA
79
n
87
ALA
79
A
ARG
80
n
88
ARG
80
A
ARG
81
n
89
ARG
81
A
ARG
82
n
90
ARG
82
A
LEU
83
n
91
LEU
83
A
GLU
84
n
92
GLU
84
A
ALA
85
n
93
ALA
85
A
ILE
86
n
94
ILE
86
A
THR
87
n
95
THR
87
A
HIS
88
n
96
HIS
88
A
PRO
89
n
97
PRO
89
A
LEU
90
n
98
LEU
90
A
ILE
91
n
99
ILE
91
A
ARG
92
n
100
ARG
92
A
ALA
93
n
101
ALA
93
A
GLU
94
n
102
GLU
94
A
THR
95
n
103
THR
95
A
GLU
96
n
104
GLU
96
A
ARG
97
n
105
ARG
97
A
GLU
98
n
106
GLU
98
A
ALA
99
n
107
ALA
99
A
ARG
100
n
108
ARG
100
A
ASP
101
n
109
ASP
101
A
ALA
102
n
110
ALA
102
A
GLN
103
n
111
GLN
103
A
GLY
104
n
112
GLY
104
A
PRO
105
n
113
PRO
105
A
TYR
106
n
114
TYR
106
A
VAL
107
n
115
VAL
107
A
ILE
108
n
116
ILE
108
A
PHE
109
n
117
PHE
109
A
VAL
110
n
118
VAL
110
A
VAL
111
n
119
VAL
111
A
PRO
112
n
120
PRO
112
A
LEU
113
n
121
LEU
113
A
LEU
114
n
122
LEU
114
A
VAL
115
n
123
VAL
115
A
GLU
116
n
124
GLU
116
A
SER
117
n
125
SER
117
A
ARG
118
n
126
ARG
118
A
ASN
119
n
127
ASN
119
A
TRP
120
n
128
TRP
120
A
LYS
121
n
129
LYS
121
A
ALA
122
n
130
ALA
122
A
ARG
123
n
131
ARG
123
A
CYS
124
n
132
CYS
124
A
ASP
125
n
133
ASP
125
A
ARG
126
n
134
ARG
126
A
VAL
127
n
135
VAL
127
A
LEU
128
n
136
LEU
128
A
VAL
129
n
137
VAL
129
A
VAL
130
n
138
VAL
130
A
ASP
131
n
139
ASP
131
A
CYS
132
n
140
CYS
132
A
PRO
133
n
141
PRO
133
A
VAL
134
n
142
VAL
134
A
ASP
135
n
143
ASP
135
A
THR
136
n
144
THR
136
A
GLN
137
n
145
GLN
137
A
ILE
138
n
146
ILE
138
A
ALA
139
n
147
ALA
139
A
ARG
140
n
148
ARG
140
A
VAL
141
n
149
VAL
141
A
MET
142
n
150
MET
142
A
GLN
143
n
151
GLN
143
A
ARG
144
n
152
ARG
144
A
ASN
145
n
153
ASN
145
A
GLY
146
n
154
GLY
146
A
PHE
147
n
155
PHE
147
A
THR
148
n
156
THR
148
A
ARG
149
n
157
ARG
149
A
GLU
150
n
158
GLU
150
A
GLN
151
n
159
GLN
151
A
VAL
152
n
160
VAL
152
A
GLU
153
n
161
GLU
153
A
ALA
154
n
162
ALA
154
A
ILE
155
n
163
ILE
155
A
ILE
156
n
164
ILE
156
A
ALA
157
n
165
ALA
157
A
ARG
158
n
166
ARG
158
A
GLN
159
n
167
GLN
159
A
ALA
160
n
168
ALA
160
A
THR
161
n
169
THR
161
A
ARG
162
n
170
ARG
162
A
GLU
163
n
171
GLU
163
A
ALA
164
n
172
ALA
164
A
ARG
165
n
173
ARG
165
A
LEU
166
n
174
LEU
166
A
ALA
167
n
175
ALA
167
A
ALA
168
n
176
ALA
168
A
ALA
169
n
177
ALA
169
A
ASP
170
n
178
ASP
170
A
ASP
171
n
179
ASP
171
A
VAL
172
n
180
VAL
172
A
ILE
173
n
181
ILE
173
A
VAL
174
n
182
VAL
174
A
ASN
175
n
183
ASN
175
A
ASP
176
n
184
ASP
176
A
ALA
177
n
185
ALA
177
A
ALA
178
n
186
ALA
178
A
THR
179
n
187
THR
179
A
PRO
180
n
188
PRO
180
A
ASP
181
n
189
ASP
181
A
ALA
182
n
190
ALA
182
A
LEU
183
n
191
LEU
183
A
ALA
184
n
192
ALA
184
A
VAL
185
n
193
VAL
185
A
GLN
186
n
194
GLN
186
A
VAL
187
n
195
VAL
187
A
ASP
188
n
196
ASP
188
A
ALA
189
n
197
ALA
189
A
LEU
190
n
198
LEU
190
A
HIS
191
n
199
HIS
191
A
GLN
192
n
200
GLN
192
A
ARG
193
n
201
ARG
193
A
TYR
194
n
202
TYR
194
A
LEU
195
n
203
LEU
195
A
ALA
196
n
204
ALA
196
A
PHE
197
n
205
PHE
197
A
ALA
198
n
206
ALA
198
A
ALA
199
n
207
ALA
199
A
ALA
200
n
208
ALA
200
A
LYS
201
n
209
LYS
201
A
HIS
202
n
210
HIS
202
A
n
1
-7
B
n
2
-6
B
n
3
-5
B
n
4
-4
B
n
5
-3
B
n
6
-2
B
n
7
-1
B
HIS
0
n
8
HIS
0
B
MET
1
n
9
MET
1
B
TYR
2
n
10
TYR
2
B
ALA
3
n
11
ALA
3
B
ILE
4
n
12
ILE
4
B
GLY
5
n
13
GLY
5
B
LEU
6
n
14
LEU
6
B
THR
7
n
15
THR
7
B
GLY
8
n
16
GLY
8
B
GLY
9
n
17
GLY
9
B
ILE
10
n
18
ILE
10
B
GLY
11
n
19
GLY
11
B
SER
12
n
20
SER
12
B
GLY
13
n
21
GLY
13
B
LYS
14
n
22
LYS
14
B
THR
15
n
23
THR
15
B
THR
16
n
24
THR
16
B
VAL
17
n
25
VAL
17
B
ALA
18
n
26
ALA
18
B
ASP
19
n
27
ASP
19
B
LEU
20
n
28
LEU
20
B
PHE
21
n
29
PHE
21
B
ALA
22
n
30
ALA
22
B
ALA
23
n
31
ALA
23
B
ARG
24
n
32
ARG
24
B
GLY
25
n
33
GLY
25
B
ALA
26
n
34
ALA
26
B
SER
27
n
35
SER
27
B
LEU
28
n
36
LEU
28
B
VAL
29
n
37
VAL
29
B
ASP
30
n
38
ASP
30
B
THR
31
n
39
THR
31
B
ASP
32
n
40
ASP
32
B
LEU
33
n
41
LEU
33
B
ILE
34
n
42
ILE
34
B
ALA
35
n
43
ALA
35
B
HIS
36
n
44
HIS
36
B
ARG
37
n
45
ARG
37
B
ILE
38
n
46
ILE
38
B
THR
39
n
47
THR
39
B
ALA
40
n
48
ALA
40
B
PRO
41
n
49
PRO
41
B
ALA
42
n
50
ALA
42
B
GLY
43
n
51
GLY
43
B
LEU
44
n
52
LEU
44
B
ALA
45
n
53
ALA
45
B
MET
46
n
54
MET
46
B
PRO
47
n
55
PRO
47
B
ALA
48
n
56
ALA
48
B
ILE
49
n
57
ILE
49
B
GLU
50
n
58
GLU
50
B
GLN
51
n
59
GLN
51
B
THR
52
n
60
THR
52
B
PHE
53
n
61
PHE
53
B
GLY
54
n
62
GLY
54
B
PRO
55
n
63
PRO
55
B
ALA
56
n
64
ALA
56
B
PHE
57
n
65
PHE
57
B
VAL
58
n
66
VAL
58
B
ALA
59
n
67
ALA
59
B
ALA
60
n
68
ALA
60
B
ASP
61
n
69
ASP
61
B
GLY
62
n
70
GLY
62
B
SER
63
n
71
SER
63
B
LEU
64
n
72
LEU
64
B
ASP
65
n
73
ASP
65
B
ARG
66
n
74
ARG
66
B
ALA
67
n
75
ALA
67
B
ARG
68
n
76
ARG
68
B
MET
69
n
77
MET
69
B
ARG
70
n
78
ARG
70
B
ALA
71
n
79
ALA
71
B
LEU
72
n
80
LEU
72
B
ILE
73
n
81
ILE
73
B
PHE
74
n
82
PHE
74
B
SER
75
n
83
SER
75
B
ASP
76
n
84
ASP
76
B
GLU
77
n
85
GLU
77
B
ASP
78
n
86
ASP
78
B
ALA
79
n
87
ALA
79
B
ARG
80
n
88
ARG
80
B
ARG
81
n
89
ARG
81
B
ARG
82
n
90
ARG
82
B
LEU
83
n
91
LEU
83
B
GLU
84
n
92
GLU
84
B
ALA
85
n
93
ALA
85
B
ILE
86
n
94
ILE
86
B
THR
87
n
95
THR
87
B
HIS
88
n
96
HIS
88
B
PRO
89
n
97
PRO
89
B
LEU
90
n
98
LEU
90
B
ILE
91
n
99
ILE
91
B
ARG
92
n
100
ARG
92
B
ALA
93
n
101
ALA
93
B
GLU
94
n
102
GLU
94
B
THR
95
n
103
THR
95
B
GLU
96
n
104
GLU
96
B
ARG
97
n
105
ARG
97
B
GLU
98
n
106
GLU
98
B
ALA
99
n
107
ALA
99
B
ARG
100
n
108
ARG
100
B
ASP
101
n
109
ASP
101
B
ALA
102
n
110
ALA
102
B
GLN
103
n
111
GLN
103
B
GLY
104
n
112
GLY
104
B
PRO
105
n
113
PRO
105
B
TYR
106
n
114
TYR
106
B
VAL
107
n
115
VAL
107
B
ILE
108
n
116
ILE
108
B
PHE
109
n
117
PHE
109
B
VAL
110
n
118
VAL
110
B
VAL
111
n
119
VAL
111
B
PRO
112
n
120
PRO
112
B
LEU
113
n
121
LEU
113
B
LEU
114
n
122
LEU
114
B
VAL
115
n
123
VAL
115
B
GLU
116
n
124
GLU
116
B
SER
117
n
125
SER
117
B
ARG
118
n
126
ARG
118
B
ASN
119
n
127
ASN
119
B
TRP
120
n
128
TRP
120
B
LYS
121
n
129
LYS
121
B
ALA
122
n
130
ALA
122
B
ARG
123
n
131
ARG
123
B
CYS
124
n
132
CYS
124
B
ASP
125
n
133
ASP
125
B
ARG
126
n
134
ARG
126
B
VAL
127
n
135
VAL
127
B
LEU
128
n
136
LEU
128
B
VAL
129
n
137
VAL
129
B
VAL
130
n
138
VAL
130
B
ASP
131
n
139
ASP
131
B
CYS
132
n
140
CYS
132
B
PRO
133
n
141
PRO
133
B
VAL
134
n
142
VAL
134
B
ASP
135
n
143
ASP
135
B
THR
136
n
144
THR
136
B
GLN
137
n
145
GLN
137
B
ILE
138
n
146
ILE
138
B
ALA
139
n
147
ALA
139
B
ARG
140
n
148
ARG
140
B
VAL
141
n
149
VAL
141
B
MET
142
n
150
MET
142
B
GLN
143
n
151
GLN
143
B
ARG
144
n
152
ARG
144
B
ASN
145
n
153
ASN
145
B
GLY
146
n
154
GLY
146
B
PHE
147
n
155
PHE
147
B
THR
148
n
156
THR
148
B
ARG
149
n
157
ARG
149
B
GLU
150
n
158
GLU
150
B
GLN
151
n
159
GLN
151
B
VAL
152
n
160
VAL
152
B
GLU
153
n
161
GLU
153
B
ALA
154
n
162
ALA
154
B
ILE
155
n
163
ILE
155
B
ILE
156
n
164
ILE
156
B
ALA
157
n
165
ALA
157
B
ARG
158
n
166
ARG
158
B
GLN
159
n
167
GLN
159
B
ALA
160
n
168
ALA
160
B
THR
161
n
169
THR
161
B
ARG
162
n
170
ARG
162
B
GLU
163
n
171
GLU
163
B
ALA
164
n
172
ALA
164
B
ARG
165
n
173
ARG
165
B
LEU
166
n
174
LEU
166
B
ALA
167
n
175
ALA
167
B
ALA
168
n
176
ALA
168
B
ALA
169
n
177
ALA
169
B
ASP
170
n
178
ASP
170
B
ASP
171
n
179
ASP
171
B
VAL
172
n
180
VAL
172
B
ILE
173
n
181
ILE
173
B
VAL
174
n
182
VAL
174
B
ASN
175
n
183
ASN
175
B
ASP
176
n
184
ASP
176
B
ALA
177
n
185
ALA
177
B
ALA
178
n
186
ALA
178
B
THR
179
n
187
THR
179
B
PRO
180
n
188
PRO
180
B
ASP
181
n
189
ASP
181
B
ALA
182
n
190
ALA
182
B
LEU
183
n
191
LEU
183
B
ALA
184
n
192
ALA
184
B
VAL
185
n
193
VAL
185
B
GLN
186
n
194
GLN
186
B
VAL
187
n
195
VAL
187
B
ASP
188
n
196
ASP
188
B
ALA
189
n
197
ALA
189
B
LEU
190
n
198
LEU
190
B
HIS
191
n
199
HIS
191
B
GLN
192
n
200
GLN
192
B
ARG
193
n
201
ARG
193
B
TYR
194
n
202
TYR
194
B
LEU
195
n
203
LEU
195
B
ALA
196
n
204
ALA
196
B
PHE
197
n
205
PHE
197
B
ALA
198
n
206
ALA
198
B
ALA
199
n
207
ALA
199
B
ALA
200
n
208
ALA
200
B
LYS
201
n
209
LYS
201
B
n
210
202
B
0.6387
0.7698
0.1628
2.4356
-0.2220
1.3041
0.1582
-0.0292
0.1408
0.0410
-0.5481
-0.0591
0.0685
0.1777
0.3899
0.1746
-0.0380
0.0472
0.2486
0.0494
0.2252
refined
68.4453
28.4372
-13.5203
X-RAY DIFFRACTION
1.5309
1.5069
0.0846
1.5907
0.0029
0.0875
-0.1790
-0.1482
0.1325
-0.3551
0.0254
0.0298
0.0855
-0.1134
0.1535
0.3053
-0.2211
0.0756
0.2400
-0.1340
0.2327
refined
78.9977
47.1184
12.2161
X-RAY DIFFRACTION
A
-4
A
202
X-RAY DIFFRACTION
1
A
301
A
301
X-RAY DIFFRACTION
1
B
0
B
201
X-RAY DIFFRACTION
2
B
301
B
301
X-RAY DIFFRACTION
2
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
27
A
N
SER
35
A
O
ILE
108
A
O
ILE
116
A
O
PHE
109
A
O
PHE
117
A
N
ILE
4
A
N
ILE
12
A
N
GLY
5
A
N
GLY
13
A
O
LEU
128
A
O
LEU
136
A
N
VAL
129
A
N
VAL
137
A
O
ASP
171
A
O
ASP
179
B
N
SER
27
B
N
SER
35
B
O
ILE
108
B
O
ILE
116
B
O
PHE
109
B
O
PHE
117
B
N
ILE
4
B
N
ILE
12
B
N
GLY
5
B
N
GLY
13
B
O
LEU
128
B
O
LEU
136
B
N
VAL
129
B
N
VAL
137
B
O
ASP
171
B
O
ASP
179
1
A
CG
HIS
-4
A
CG
HIS
4
1
Y
1
A
ND1
HIS
-4
A
ND1
HIS
4
1
Y
1
A
CD2
HIS
-4
A
CD2
HIS
4
1
Y
1
A
CE1
HIS
-4
A
CE1
HIS
4
1
Y
1
A
NE2
HIS
-4
A
NE2
HIS
4
1
Y
1
A
CG
HIS
-2
A
CG
HIS
6
1
Y
1
A
ND1
HIS
-2
A
ND1
HIS
6
1
Y
1
A
CD2
HIS
-2
A
CD2
HIS
6
1
Y
1
A
CE1
HIS
-2
A
CE1
HIS
6
1
Y
1
A
NE2
HIS
-2
A
NE2
HIS
6
1
Y
1
A
CG
MET
1
A
CG
MET
9
1
Y
1
A
SD
MET
1
A
SD
MET
9
1
Y
1
A
CE
MET
1
A
CE
MET
9
1
Y
1
A
CG
LEU
44
A
CG
LEU
52
1
Y
1
A
CD1
LEU
44
A
CD1
LEU
52
1
Y
1
A
CD2
LEU
44
A
CD2
LEU
52
1
Y
1
A
CG
ASP
65
A
CG
ASP
73
1
Y
1
A
OD1
ASP
65
A
OD1
ASP
73
1
Y
1
A
OD2
ASP
65
A
OD2
ASP
73
1
Y
1
A
CG
ARG
68
A
CG
ARG
76
1
Y
1
A
CD
ARG
68
A
CD
ARG
76
1
Y
1
A
NE
ARG
68
A
NE
ARG
76
1
Y
1
A
CZ
ARG
68
A
CZ
ARG
76
1
Y
1
A
NH1
ARG
68
A
NH1
ARG
76
1
Y
1
A
NH2
ARG
68
A
NH2
ARG
76
1
Y
1
A
CG
ARG
70
A
CG
ARG
78
1
Y
1
A
CD
ARG
70
A
CD
ARG
78
1
Y
1
A
NE
ARG
70
A
NE
ARG
78
1
Y
1
A
CZ
ARG
70
A
CZ
ARG
78
1
Y
1
A
NH1
ARG
70
A
NH1
ARG
78
1
Y
1
A
NH2
ARG
70
A
NH2
ARG
78
1
Y
1
A
CG
LEU
72
A
CG
LEU
80
1
Y
1
A
CD1
LEU
72
A
CD1
LEU
80
1
Y
1
A
CD2
LEU
72
A
CD2
LEU
80
1
Y
1
A
CG1
ILE
73
A
CG1
ILE
81
1
Y
1
A
CG2
ILE
73
A
CG2
ILE
81
1
Y
1
A
CD1
ILE
73
A
CD1
ILE
81
1
Y
1
A
CG
PHE
74
A
CG
PHE
82
1
Y
1
A
CD1
PHE
74
A
CD1
PHE
82
1
Y
1
A
CD2
PHE
74
A
CD2
PHE
82
1
Y
1
A
CE1
PHE
74
A
CE1
PHE
82
1
Y
1
A
CE2
PHE
74
A
CE2
PHE
82
1
Y
1
A
CZ
PHE
74
A
CZ
PHE
82
1
Y
1
A
OG
SER
75
A
OG
SER
83
1
Y
1
A
CG
GLU
77
A
CG
GLU
85
1
Y
1
A
CD
GLU
77
A
CD
GLU
85
1
Y
1
A
OE1
GLU
77
A
OE1
GLU
85
1
Y
1
A
OE2
GLU
77
A
OE2
GLU
85
1
Y
1
A
CG
ASP
78
A
CG
ASP
86
1
Y
1
A
OD1
ASP
78
A
OD1
ASP
86
1
Y
1
A
OD2
ASP
78
A
OD2
ASP
86
1
Y
1
A
CG
ARG
80
A
CG
ARG
88
1
Y
1
A
CD
ARG
80
A
CD
ARG
88
1
Y
1
A
NE
ARG
80
A
NE
ARG
88
1
Y
1
A
CZ
ARG
80
A
CZ
ARG
88
1
Y
1
A
NH1
ARG
80
A
NH1
ARG
88
1
Y
1
A
NH2
ARG
80
A
NH2
ARG
88
1
Y
1
A
CG
ARG
81
A
CG
ARG
89
1
Y
1
A
CD
ARG
81
A
CD
ARG
89
1
Y
1
A
NE
ARG
81
A
NE
ARG
89
1
Y
1
A
CZ
ARG
81
A
CZ
ARG
89
1
Y
1
A
NH1
ARG
81
A
NH1
ARG
89
1
Y
1
A
NH2
ARG
81
A
NH2
ARG
89
1
Y
1
A
CG
ARG
82
A
CG
ARG
90
1
Y
1
A
CD
ARG
82
A
CD
ARG
90
1
Y
1
A
NE
ARG
82
A
NE
ARG
90
1
Y
1
A
CZ
ARG
82
A
CZ
ARG
90
1
Y
1
A
NH1
ARG
82
A
NH1
ARG
90
1
Y
1
A
NH2
ARG
82
A
NH2
ARG
90
1
Y
1
A
CG
ARG
92
A
CG
ARG
100
1
Y
1
A
CD
ARG
92
A
CD
ARG
100
1
Y
1
A
NE
ARG
92
A
NE
ARG
100
1
Y
1
A
CZ
ARG
92
A
CZ
ARG
100
1
Y
1
A
NH1
ARG
92
A
NH1
ARG
100
1
Y
1
A
NH2
ARG
92
A
NH2
ARG
100
1
Y
1
A
CG
ARG
118
A
CG
ARG
126
1
Y
1
A
CD
ARG
118
A
CD
ARG
126
1
Y
1
A
NE
ARG
118
A
NE
ARG
126
1
Y
1
A
CZ
ARG
118
A
CZ
ARG
126
1
Y
1
A
NH1
ARG
118
A
NH1
ARG
126
1
Y
1
A
NH2
ARG
118
A
NH2
ARG
126
1
Y
1
A
CG
LYS
121
A
CG
LYS
129
1
Y
1
A
CD
LYS
121
A
CD
LYS
129
1
Y
1
A
CE
LYS
121
A
CE
LYS
129
1
Y
1
A
NZ
LYS
121
A
NZ
LYS
129
1
Y
1
A
CG
ARG
144
A
CG
ARG
152
1
Y
1
A
CD
ARG
144
A
CD
ARG
152
1
Y
1
A
NE
ARG
144
A
NE
ARG
152
1
Y
1
A
CZ
ARG
144
A
CZ
ARG
152
1
Y
1
A
NH1
ARG
144
A
NH1
ARG
152
1
Y
1
A
NH2
ARG
144
A
NH2
ARG
152
1
Y
1
A
CG
ARG
158
A
CG
ARG
166
1
Y
1
A
CD
ARG
158
A
CD
ARG
166
1
Y
1
A
NE
ARG
158
A
NE
ARG
166
1
Y
1
A
CZ
ARG
158
A
CZ
ARG
166
1
Y
1
A
NH1
ARG
158
A
NH1
ARG
166
1
Y
1
A
NH2
ARG
158
A
NH2
ARG
166
1
Y
1
B
CG
HIS
0
B
CG
HIS
8
1
Y
1
B
ND1
HIS
0
B
ND1
HIS
8
1
Y
1
B
CD2
HIS
0
B
CD2
HIS
8
1
Y
1
B
CE1
HIS
0
B
CE1
HIS
8
1
Y
1
B
NE2
HIS
0
B
NE2
HIS
8
1
Y
1
B
CG
ARG
70
B
CG
ARG
78
1
Y
1
B
CD
ARG
70
B
CD
ARG
78
1
Y
1
B
NE
ARG
70
B
NE
ARG
78
1
Y
1
B
CZ
ARG
70
B
CZ
ARG
78
1
Y
1
B
NH1
ARG
70
B
NH1
ARG
78
1
Y
1
B
NH2
ARG
70
B
NH2
ARG
78
1
Y
1
B
CG
PHE
74
B
CG
PHE
82
1
Y
1
B
CD1
PHE
74
B
CD1
PHE
82
1
Y
1
B
CD2
PHE
74
B
CD2
PHE
82
1
Y
1
B
CE1
PHE
74
B
CE1
PHE
82
1
Y
1
B
CE2
PHE
74
B
CE2
PHE
82
1
Y
1
B
CZ
PHE
74
B
CZ
PHE
82
1
Y
1
B
CG
ASP
76
B
CG
ASP
84
1
Y
1
B
OD1
ASP
76
B
OD1
ASP
84
1
Y
1
B
OD2
ASP
76
B
OD2
ASP
84
1
Y
1
B
CG
GLU
77
B
CG
GLU
85
1
Y
1
B
CD
GLU
77
B
CD
GLU
85
1
Y
1
B
OE1
GLU
77
B
OE1
GLU
85
1
Y
1
B
OE2
GLU
77
B
OE2
GLU
85
1
Y
1
B
CG
ASP
78
B
CG
ASP
86
1
Y
1
B
OD1
ASP
78
B
OD1
ASP
86
1
Y
1
B
OD2
ASP
78
B
OD2
ASP
86
1
Y
1
B
CG
ARG
80
B
CG
ARG
88
1
Y
1
B
CD
ARG
80
B
CD
ARG
88
1
Y
1
B
NE
ARG
80
B
NE
ARG
88
1
Y
1
B
CZ
ARG
80
B
CZ
ARG
88
1
Y
1
B
NH1
ARG
80
B
NH1
ARG
88
1
Y
1
B
NH2
ARG
80
B
NH2
ARG
88
1
Y
1
B
CG
ARG
81
B
CG
ARG
89
1
Y
1
B
CD
ARG
81
B
CD
ARG
89
1
Y
1
B
NE
ARG
81
B
NE
ARG
89
1
Y
1
B
CZ
ARG
81
B
CZ
ARG
89
1
Y
1
B
NH1
ARG
81
B
NH1
ARG
89
1
Y
1
B
NH2
ARG
81
B
NH2
ARG
89
1
Y
1
B
CG
GLN
103
B
CG
GLN
111
1
Y
1
B
CD
GLN
103
B
CD
GLN
111
1
Y
1
B
OE1
GLN
103
B
OE1
GLN
111
1
Y
1
B
NE2
GLN
103
B
NE2
GLN
111
1
Y
1
B
CG
ARG
118
B
CG
ARG
126
1
Y
1
B
CD
ARG
118
B
CD
ARG
126
1
Y
1
B
NE
ARG
118
B
NE
ARG
126
1
Y
1
B
CZ
ARG
118
B
CZ
ARG
126
1
Y
1
B
NH1
ARG
118
B
NH1
ARG
126
1
Y
1
B
NH2
ARG
118
B
NH2
ARG
126
1
Y
1
B
CG
LYS
121
B
CG
LYS
129
1
Y
1
B
CD
LYS
121
B
CD
LYS
129
1
Y
1
B
CE
LYS
121
B
CE
LYS
129
1
Y
1
B
NZ
LYS
121
B
NZ
LYS
129
1
Y
1
B
CG
GLU
150
B
CG
GLU
158
1
Y
1
B
CD
GLU
150
B
CD
GLU
158
1
Y
1
B
OE1
GLU
150
B
OE1
GLU
158
1
Y
1
B
OE2
GLU
150
B
OE2
GLU
158
1
Y
1
B
CG
ARG
158
B
CG
ARG
166
1
Y
1
B
CD
ARG
158
B
CD
ARG
166
1
Y
1
B
NE
ARG
158
B
NE
ARG
166
1
Y
1
B
CZ
ARG
158
B
CZ
ARG
166
1
Y
1
B
NH1
ARG
158
B
NH1
ARG
166
1
Y
1
B
NH2
ARG
158
B
NH2
ARG
166
1
Y
1
B
CG
LYS
201
B
CG
LYS
209
1
Y
1
B
CD
LYS
201
B
CD
LYS
209
1
Y
1
B
CE
LYS
201
B
CE
LYS
209
1
Y
1
B
NZ
LYS
201
B
NZ
LYS
209
1
Y
1
A
MET
-7
A
MET
1
1
Y
1
A
ALA
-6
A
ALA
2
1
Y
1
A
HIS
-5
A
HIS
3
1
Y
1
B
MET
-7
B
MET
1
1
Y
1
B
ALA
-6
B
ALA
2
1
Y
1
B
HIS
-5
B
HIS
3
1
Y
1
B
HIS
-4
B
HIS
4
1
Y
1
B
HIS
-3
B
HIS
5
1
Y
1
B
HIS
-2
B
HIS
6
1
Y
1
B
HIS
-1
B
HIS
7
1
Y
1
B
HIS
202
B
HIS
210
1
Y
1
A
A
O3B
O
ADP
HOH
301
421
2.15
1
B
B
OE1
O
GLN
HOH
159
421
2.18
1
A
HIS
-2
156.27
114.33
1
A
LEU
113
-104.35
44.54
1
A
ASN
175
-110.34
78.76
1
B
LEU
113
-102.68
45.22
1
B
ASN
175
-108.38
78.75
168.510
63.8381
30.280
0.6900
0.6900
-0.0000
0.6900
-0.0000
-2.2400
0.9430
0.9200
U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2518
0.2128
0.2148
2.6000
44.0400
1130
22169
5.1000
99.7300
0.2267
0.1980
1.000
1.000
0.8237
18.6350
0.1960
0.3336
0.2547
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.3340
0.2550
0.8000
0.8000
1.2000
4i1u
MAXIMUM LIKELIHOOD
MASK
2.6000
44.0400
53
3070
54
0
2963
0.011
0.019
3067
0.004
0.020
2885
1.469
1.970
4203
0.954
3.000
6543
5.813
5.000
407
37.442
23.065
124
15.117
15.000
426
12.708
15.000
28
0.074
0.200
508
0.006
0.021
3553
0.003
0.020
693
1
A
1
10592
X-RAY DIFFRACTION
interatomic distance
0.080
0.050
2
B
1
10592
X-RAY DIFFRACTION
interatomic distance
0.080
0.050
0.3900
0.3320
2.6670
76
1538
1614
20
99.8100
59.114
2.600
50
4I1V
22230
22169
-3.000
0.046
1
26.180
5.2
99.700
0.500
2.600
2.670
3.700
8952
1624
1
99.800
0.386
2.670
2.740
4.800
8583
1568
1
99.700
0.298
2.740
2.820
6.260
8329
1534
1
99.900
0.229
2.820
2.910
8.000
8115
1490
1
99.800
0.179
2.910
3.000
10.020
7896
1457
1
99.800
0.146
3.000
3.110
12.310
7512
1393
1
99.900
0.115
3.110
3.230
15.010
7294
1361
1
99.800
0.082
3.230
3.360
19.650
6949
1311
1
99.900
0.058
3.360
3.510
26.670
6636
1262
1
99.800
0.055
3.510
3.680
27.930
6339
1201
1
99.700
0.045
3.680
3.880
33.740
5954
1148
1
99.600
0.037
3.880
4.110
39.040
5453
1077
1
99.700
0.029
4.110
4.390
47.370
5023
1015
1
99.800
0.026
4.390
4.750
51.980
4546
936
1
99.700
0.025
4.750
5.200
52.900
4449
888
1
99.400
0.026
5.200
5.810
50.310
4001
812
1
99.600
0.025
5.810
6.710
51.840
3433
716
1
99.700
0.020
6.710
8.220
64.990
3118
614
1
100.000
0.015
8.220
11.630
75.740
2382
480
1
99.400
0.015
11.630
76.290
1331
282
1
97.900
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Fri Jul 6 14:21:49 2012 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.5.1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data reduction
XDS
Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
GLY
13
A
GLY
21
HELX_P
A
ARG
24
A
ARG
32
1
1
12
A
THR
31
A
THR
39
HELX_P
A
ILE
38
A
ILE
46
1
2
8
A
ALA
45
A
ALA
53
HELX_P
A
GLY
54
A
GLY
62
1
3
10
A
PRO
55
A
PRO
63
HELX_P
A
VAL
58
A
VAL
66
5
4
4
A
ASP
65
A
ASP
73
HELX_P
A
ASP
76
A
ASP
84
1
5
12
A
ASP
76
A
ASP
84
HELX_P
A
ALA
102
A
ALA
110
1
6
27
A
SER
117
A
SER
125
HELX_P
A
CYS
124
A
CYS
132
1
7
8
A
PRO
133
A
PRO
141
HELX_P
A
GLY
146
A
GLY
154
1
8
14
A
THR
148
A
THR
156
HELX_P
A
GLN
159
A
GLN
167
1
9
12
A
THR
161
A
THR
169
HELX_P
A
ALA
168
A
ALA
176
1
10
8
A
ALA
182
A
ALA
190
HELX_P
A
ALA
200
A
ALA
208
1
11
19
B
GLY
13
B
GLY
21
HELX_P
B
ARG
24
B
ARG
32
1
12
12
B
THR
31
B
THR
39
HELX_P
B
ILE
38
B
ILE
46
1
13
8
B
ALA
45
B
ALA
53
HELX_P
B
GLY
54
B
GLY
62
1
14
10
B
PRO
55
B
PRO
63
HELX_P
B
VAL
58
B
VAL
66
5
15
4
B
ASP
65
B
ASP
73
HELX_P
B
ASP
76
B
ASP
84
1
16
12
B
ASP
76
B
ASP
84
HELX_P
B
ALA
102
B
ALA
110
1
17
27
B
SER
117
B
SER
125
HELX_P
B
CYS
124
B
CYS
132
1
18
8
B
PRO
133
B
PRO
141
HELX_P
B
GLY
146
B
GLY
154
1
19
14
B
THR
148
B
THR
156
HELX_P
B
GLN
159
B
GLN
167
1
20
12
B
THR
161
B
THR
169
HELX_P
B
ALA
168
B
ALA
176
1
21
8
B
ALA
182
B
ALA
190
HELX_P
B
ALA
200
B
ALA
208
1
22
19
TRANSFERASE
Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Seattle Structural Genomics Center for Infectious Disease, SSGCID, National Institute for Allergy and Infectious Disease, ATP-dependent, transferase, ADP, CoA, COD
A
B
A
HIS
0
A
HIS
8
A
ALA
200
A
ALA
208
0
B
HIS
0
B
HIS
8
B
ALA
200
B
ALA
208
0
A4JBA9_BURVG
UNP
1
1
A4JBA9
MYAIGLTGGIGSGKTTVADLFAARGASLVDTDLIAHRITAPAGLAMPAIEQTFGPAFVAADGSLDRARMRALIFSDEDAR
RRLEAITHPLIRAETEREARDAQGPYVIFVVPLLVESRNWKARCDRVLVVDCPVDTQIARVMQRNGFTREQVEAIIARQA
TREARLAAADDVIVNDAATPDALAVQVDALHQRYLAFAAAKH
1
202
4I1V
1
202
A4JBA9
A
1
9
210
1
202
4I1V
1
202
A4JBA9
B
1
9
210
1
expression tag
MET
-7
4I1V
A
A4JBA9
UNP
1
1
expression tag
ALA
-6
4I1V
A
A4JBA9
UNP
2
1
expression tag
HIS
-5
4I1V
A
A4JBA9
UNP
3
1
expression tag
HIS
-4
4I1V
A
A4JBA9
UNP
4
1
expression tag
HIS
-3
4I1V
A
A4JBA9
UNP
5
1
expression tag
HIS
-2
4I1V
A
A4JBA9
UNP
6
1
expression tag
HIS
-1
4I1V
A
A4JBA9
UNP
7
1
expression tag
HIS
0
4I1V
A
A4JBA9
UNP
8
2
expression tag
MET
-7
4I1V
B
A4JBA9
UNP
1
2
expression tag
ALA
-6
4I1V
B
A4JBA9
UNP
2
2
expression tag
HIS
-5
4I1V
B
A4JBA9
UNP
3
2
expression tag
HIS
-4
4I1V
B
A4JBA9
UNP
4
2
expression tag
HIS
-3
4I1V
B
A4JBA9
UNP
5
2
expression tag
HIS
-2
4I1V
B
A4JBA9
UNP
6
2
expression tag
HIS
-1
4I1V
B
A4JBA9
UNP
7
2
expression tag
HIS
0
4I1V
B
A4JBA9
UNP
8
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
SER
27
A
SER
35
A
ASP
30
A
ASP
38
A
VAL
107
A
VAL
115
A
VAL
110
A
VAL
118
A
ALA
3
A
ALA
11
A
THR
7
A
THR
15
A
ARG
126
A
ARG
134
A
ASP
131
A
ASP
139
A
ASP
171
A
ASP
179
A
VAL
174
A
VAL
182
B
SER
27
B
SER
35
B
ASP
30
B
ASP
38
B
VAL
107
B
VAL
115
B
VAL
110
B
VAL
118
B
ALA
3
B
ALA
11
B
THR
7
B
THR
15
B
ARG
126
B
ARG
134
B
ASP
131
B
ASP
139
B
ASP
171
B
ASP
179
B
VAL
174
B
VAL
182
BINDING SITE FOR RESIDUE ADP A 301
A
ADP
301
Software
15
BINDING SITE FOR RESIDUE ADP B 301
B
ADP
301
Software
15
A
GLY
9
A
GLY
17
15
1_555
A
GLY
11
A
GLY
19
15
1_555
A
SER
12
A
SER
20
15
1_555
A
GLY
13
A
GLY
21
15
1_555
A
LYS
14
A
LYS
22
15
1_555
A
THR
15
A
THR
23
15
1_555
A
THR
16
A
THR
24
15
1_555
A
ARG
140
A
ARG
148
15
1_555
A
ASN
175
A
ASN
183
15
1_555
A
ALA
177
A
ALA
185
15
1_555
A
ALA
178
A
ALA
186
15
1_555
A
THR
179
A
THR
187
15
1_555
A
PRO
180
A
PRO
188
15
1_555
A
HOH
421
E
HOH
15
1_555
A
HOH
430
E
HOH
15
1_555
B
GLY
9
B
GLY
17
15
1_555
B
GLY
11
B
GLY
19
15
1_555
B
SER
12
B
SER
20
15
1_555
B
GLY
13
B
GLY
21
15
1_555
B
LYS
14
B
LYS
22
15
1_555
B
THR
15
B
THR
23
15
1_555
B
THR
16
B
THR
24
15
1_555
B
ARG
140
B
ARG
148
15
1_555
B
ARG
144
B
ARG
152
15
1_555
B
ASN
175
B
ASN
183
15
1_555
B
ALA
177
B
ALA
185
15
1_555
B
ALA
178
B
ALA
186
15
6_765
B
ALA
178
B
ALA
186
15
1_555
B
THR
179
B
THR
187
15
1_555
B
PRO
180
B
PRO
188
15
1_555
154
P 32 2 1