0.006833
0.000000
0.000000
0.000000
0.006833
0.000000
0.000000
0.000000
0.006833
0.00000
0.00000
0.00000
Gajiwala, K.S.
Feng, J.
Ferre, R.
Ryan, K.
Brodsky, O.
Stewart, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
146.342
146.342
146.342
C24 H25 Cl F N5 O2
469.939
(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-methoxyquinazolin-6-yl}-4-(piperidin-1-yl)but-2-enamide
Dacomitinib
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
N
Y
8
N
C
Y
9
N
N
Y
10
N
C
N
11
N
N
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
N
18
N
F
N
19
N
CL
N
20
N
O
N
21
N
C
N
22
N
N
N
23
N
C
N
24
N
C
N
25
N
C
N
26
N
C
N
27
N
N
N
28
N
O
N
29
N
C
N
30
N
C
N
31
N
C
N
32
N
C
N
33
N
C
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
N
N
60
S
C
N
61
N
C
N
62
N
O
N
63
N
C
N
64
N
O
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
N
N
73
S
C
N
74
N
C
N
75
N
O
N
76
N
C
N
77
N
C
N
78
N
C
N
79
N
N
N
80
N
C
N
81
N
N
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
S
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
N
N
133
R
C
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
S
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
N
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
Y
200
N
C
Y
201
N
N
Y
202
N
C
Y
203
N
C
Y
204
N
N
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
S
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
N
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
N
290
N
C
N
291
N
S
N
292
N
C
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
Y
1
N
sing
Y
2
N
doub
Y
3
N
sing
N
4
N
sing
Y
5
N
sing
N
6
N
sing
N
7
N
sing
Y
8
N
doub
Y
9
N
sing
N
10
N
sing
Y
11
N
doub
Y
12
N
doub
N
13
N
sing
N
14
E
doub
N
15
N
sing
N
16
N
sing
N
17
N
doub
Y
18
N
sing
N
19
N
sing
Y
20
N
doub
Y
21
N
sing
N
22
N
sing
Y
23
N
sing
N
24
N
sing
Y
25
N
sing
N
26
N
sing
Y
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
Y
38
N
sing
Y
39
N
doub
Y
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
Y
201
N
sing
Y
202
N
doub
Y
203
N
doub
N
204
N
sing
Y
205
N
sing
N
206
N
sing
Y
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
Y
308
N
sing
Y
309
N
sing
N
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
Y
376
N
doub
Y
377
N
sing
Y
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
doub
N
388
N
sing
Y
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
doub
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
Y
404
N
doub
Y
405
N
sing
Y
406
N
sing
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
doub
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
UK
Structure
STRUE6
2005
0969-2126
21
209
219
10.1016/j.str.2012.11.014
23273428
Insights into the Aberrant Activity of Mutant EGFR Kinase Domain and Drug Recognition.
2013
10.2210/pdb4i23/pdb
pdb_00004i23
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
98
1
Mirrors
CCD
2011-01-21
ADSC QUANTUM 315
Mirrors
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
5.0.2
ALS
1.0
SYNCHROTRON
ALS BEAMLINE 5.0.2
37448.262
Epidermal growth factor receptor
2.7.10.1
UNP residues 695-1022, EGFR kinase domain
1
man
polymer
469.939
(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-methoxyquinazolin-6-yl}-4-(piperidin-1-yl)but-2-enamide
1
syn
non-polymer
Proto-oncogene c-ErbB-1, Receptor tyrosine-protein kinase erbB-1
no
no
GSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH
VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI
TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL
PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDA
DEYLIPQQG
GSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH
VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI
TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL
PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDA
DEYLIPQQG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
EGFR, ERBB, ERBB1, HER1
9606
Homo sapiens
7108
Spodoptera frugiperda
1
3.49
64.73
VAPOR DIFFUSION, HANGING DROP
1.2-1.4 M Na-K Tartrate 0.1 M MES, pH 6.9-7.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K
6.9 - 7
294
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2013-01-16
1
1
2013-02-27
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-11-21
REL
REL
1C9
(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-methoxyquinazolin-6-yl}-4-(piperidin-1-yl)but-2-enamide
1C9
9001
2
1C9
1C9
9001
A
n
1
694
A
SER
695
n
2
SER
695
A
GLY
696
n
3
GLY
696
A
GLU
697
n
4
GLU
697
A
ALA
698
n
5
ALA
698
A
PRO
699
n
6
PRO
699
A
ASN
700
n
7
ASN
700
A
GLN
701
n
8
GLN
701
A
ALA
702
n
9
ALA
702
A
LEU
703
n
10
LEU
703
A
LEU
704
n
11
LEU
704
A
ARG
705
n
12
ARG
705
A
ILE
706
n
13
ILE
706
A
LEU
707
n
14
LEU
707
A
LYS
708
n
15
LYS
708
A
GLU
709
n
16
GLU
709
A
THR
710
n
17
THR
710
A
GLU
711
n
18
GLU
711
A
PHE
712
n
19
PHE
712
A
LYS
713
n
20
LYS
713
A
LYS
714
n
21
LYS
714
A
ILE
715
n
22
ILE
715
A
LYS
716
n
23
LYS
716
A
VAL
717
n
24
VAL
717
A
LEU
718
n
25
LEU
718
A
GLY
719
n
26
GLY
719
A
SER
720
n
27
SER
720
A
n
28
721
A
n
29
722
A
n
30
723
A
GLY
724
n
31
GLY
724
A
THR
725
n
32
THR
725
A
VAL
726
n
33
VAL
726
A
TYR
727
n
34
TYR
727
A
LYS
728
n
35
LYS
728
A
GLY
729
n
36
GLY
729
A
LEU
730
n
37
LEU
730
A
TRP
731
n
38
TRP
731
A
ILE
732
n
39
ILE
732
A
PRO
733
n
40
PRO
733
A
GLU
734
n
41
GLU
734
A
GLY
735
n
42
GLY
735
A
GLU
736
n
43
GLU
736
A
LYS
737
n
44
LYS
737
A
VAL
738
n
45
VAL
738
A
LYS
739
n
46
LYS
739
A
ILE
740
n
47
ILE
740
A
PRO
741
n
48
PRO
741
A
VAL
742
n
49
VAL
742
A
ALA
743
n
50
ALA
743
A
ILE
744
n
51
ILE
744
A
LYS
745
n
52
LYS
745
A
GLU
746
n
53
GLU
746
A
LEU
747
n
54
LEU
747
A
n
55
748
A
n
56
749
A
ALA
750
n
57
ALA
750
A
THR
751
n
58
THR
751
A
SER
752
n
59
SER
752
A
PRO
753
n
60
PRO
753
A
LYS
754
n
61
LYS
754
A
ALA
755
n
62
ALA
755
A
ASN
756
n
63
ASN
756
A
LYS
757
n
64
LYS
757
A
GLU
758
n
65
GLU
758
A
ILE
759
n
66
ILE
759
A
LEU
760
n
67
LEU
760
A
ASP
761
n
68
ASP
761
A
GLU
762
n
69
GLU
762
A
ALA
763
n
70
ALA
763
A
TYR
764
n
71
TYR
764
A
VAL
765
n
72
VAL
765
A
MET
766
n
73
MET
766
A
ALA
767
n
74
ALA
767
A
SER
768
n
75
SER
768
A
VAL
769
n
76
VAL
769
A
ASP
770
n
77
ASP
770
A
ASN
771
n
78
ASN
771
A
PRO
772
n
79
PRO
772
A
HIS
773
n
80
HIS
773
A
VAL
774
n
81
VAL
774
A
CYS
775
n
82
CYS
775
A
ARG
776
n
83
ARG
776
A
LEU
777
n
84
LEU
777
A
LEU
778
n
85
LEU
778
A
GLY
779
n
86
GLY
779
A
ILE
780
n
87
ILE
780
A
CYS
781
n
88
CYS
781
A
LEU
782
n
89
LEU
782
A
THR
783
n
90
THR
783
A
SER
784
n
91
SER
784
A
THR
785
n
92
THR
785
A
VAL
786
n
93
VAL
786
A
GLN
787
n
94
GLN
787
A
LEU
788
n
95
LEU
788
A
ILE
789
n
96
ILE
789
A
THR
790
n
97
THR
790
A
GLN
791
n
98
GLN
791
A
LEU
792
n
99
LEU
792
A
MET
793
n
100
MET
793
A
PRO
794
n
101
PRO
794
A
PHE
795
n
102
PHE
795
A
GLY
796
n
103
GLY
796
A
CYS
797
n
104
CYS
797
A
LEU
798
n
105
LEU
798
A
LEU
799
n
106
LEU
799
A
ASP
800
n
107
ASP
800
A
TYR
801
n
108
TYR
801
A
VAL
802
n
109
VAL
802
A
ARG
803
n
110
ARG
803
A
GLU
804
n
111
GLU
804
A
HIS
805
n
112
HIS
805
A
LYS
806
n
113
LYS
806
A
ASP
807
n
114
ASP
807
A
ASN
808
n
115
ASN
808
A
ILE
809
n
116
ILE
809
A
GLY
810
n
117
GLY
810
A
SER
811
n
118
SER
811
A
GLN
812
n
119
GLN
812
A
TYR
813
n
120
TYR
813
A
LEU
814
n
121
LEU
814
A
LEU
815
n
122
LEU
815
A
ASN
816
n
123
ASN
816
A
TRP
817
n
124
TRP
817
A
CYS
818
n
125
CYS
818
A
VAL
819
n
126
VAL
819
A
GLN
820
n
127
GLN
820
A
ILE
821
n
128
ILE
821
A
ALA
822
n
129
ALA
822
A
LYS
823
n
130
LYS
823
A
GLY
824
n
131
GLY
824
A
MET
825
n
132
MET
825
A
ASN
826
n
133
ASN
826
A
TYR
827
n
134
TYR
827
A
LEU
828
n
135
LEU
828
A
GLU
829
n
136
GLU
829
A
ASP
830
n
137
ASP
830
A
ARG
831
n
138
ARG
831
A
ARG
832
n
139
ARG
832
A
LEU
833
n
140
LEU
833
A
VAL
834
n
141
VAL
834
A
HIS
835
n
142
HIS
835
A
ARG
836
n
143
ARG
836
A
ASP
837
n
144
ASP
837
A
LEU
838
n
145
LEU
838
A
ALA
839
n
146
ALA
839
A
ALA
840
n
147
ALA
840
A
ARG
841
n
148
ARG
841
A
ASN
842
n
149
ASN
842
A
VAL
843
n
150
VAL
843
A
LEU
844
n
151
LEU
844
A
VAL
845
n
152
VAL
845
A
LYS
846
n
153
LYS
846
A
THR
847
n
154
THR
847
A
PRO
848
n
155
PRO
848
A
GLN
849
n
156
GLN
849
A
HIS
850
n
157
HIS
850
A
VAL
851
n
158
VAL
851
A
LYS
852
n
159
LYS
852
A
ILE
853
n
160
ILE
853
A
THR
854
n
161
THR
854
A
ASP
855
n
162
ASP
855
A
PHE
856
n
163
PHE
856
A
GLY
857
n
164
GLY
857
A
LEU
858
n
165
LEU
858
A
ALA
859
n
166
ALA
859
A
LYS
860
n
167
LYS
860
A
LEU
861
n
168
LEU
861
A
LEU
862
n
169
LEU
862
A
GLY
863
n
170
GLY
863
A
ALA
864
n
171
ALA
864
A
GLU
865
n
172
GLU
865
A
GLU
866
n
173
GLU
866
A
LYS
867
n
174
LYS
867
A
GLU
868
n
175
GLU
868
A
TYR
869
n
176
TYR
869
A
HIS
870
n
177
HIS
870
A
ALA
871
n
178
ALA
871
A
GLU
872
n
179
GLU
872
A
GLY
873
n
180
GLY
873
A
GLY
874
n
181
GLY
874
A
LYS
875
n
182
LYS
875
A
VAL
876
n
183
VAL
876
A
PRO
877
n
184
PRO
877
A
ILE
878
n
185
ILE
878
A
LYS
879
n
186
LYS
879
A
TRP
880
n
187
TRP
880
A
MET
881
n
188
MET
881
A
ALA
882
n
189
ALA
882
A
LEU
883
n
190
LEU
883
A
GLU
884
n
191
GLU
884
A
SER
885
n
192
SER
885
A
ILE
886
n
193
ILE
886
A
LEU
887
n
194
LEU
887
A
HIS
888
n
195
HIS
888
A
ARG
889
n
196
ARG
889
A
ILE
890
n
197
ILE
890
A
TYR
891
n
198
TYR
891
A
THR
892
n
199
THR
892
A
HIS
893
n
200
HIS
893
A
GLN
894
n
201
GLN
894
A
SER
895
n
202
SER
895
A
ASP
896
n
203
ASP
896
A
VAL
897
n
204
VAL
897
A
TRP
898
n
205
TRP
898
A
SER
899
n
206
SER
899
A
TYR
900
n
207
TYR
900
A
GLY
901
n
208
GLY
901
A
VAL
902
n
209
VAL
902
A
THR
903
n
210
THR
903
A
VAL
904
n
211
VAL
904
A
TRP
905
n
212
TRP
905
A
GLU
906
n
213
GLU
906
A
LEU
907
n
214
LEU
907
A
MET
908
n
215
MET
908
A
THR
909
n
216
THR
909
A
PHE
910
n
217
PHE
910
A
GLY
911
n
218
GLY
911
A
SER
912
n
219
SER
912
A
LYS
913
n
220
LYS
913
A
PRO
914
n
221
PRO
914
A
TYR
915
n
222
TYR
915
A
ASP
916
n
223
ASP
916
A
GLY
917
n
224
GLY
917
A
ILE
918
n
225
ILE
918
A
PRO
919
n
226
PRO
919
A
ALA
920
n
227
ALA
920
A
SER
921
n
228
SER
921
A
GLU
922
n
229
GLU
922
A
ILE
923
n
230
ILE
923
A
SER
924
n
231
SER
924
A
SER
925
n
232
SER
925
A
ILE
926
n
233
ILE
926
A
LEU
927
n
234
LEU
927
A
GLU
928
n
235
GLU
928
A
LYS
929
n
236
LYS
929
A
GLY
930
n
237
GLY
930
A
GLU
931
n
238
GLU
931
A
ARG
932
n
239
ARG
932
A
LEU
933
n
240
LEU
933
A
PRO
934
n
241
PRO
934
A
GLN
935
n
242
GLN
935
A
PRO
936
n
243
PRO
936
A
PRO
937
n
244
PRO
937
A
ILE
938
n
245
ILE
938
A
CYS
939
n
246
CYS
939
A
THR
940
n
247
THR
940
A
ILE
941
n
248
ILE
941
A
ASP
942
n
249
ASP
942
A
VAL
943
n
250
VAL
943
A
TYR
944
n
251
TYR
944
A
MET
945
n
252
MET
945
A
ILE
946
n
253
ILE
946
A
MET
947
n
254
MET
947
A
VAL
948
n
255
VAL
948
A
LYS
949
n
256
LYS
949
A
CYS
950
n
257
CYS
950
A
TRP
951
n
258
TRP
951
A
MET
952
n
259
MET
952
A
ILE
953
n
260
ILE
953
A
ASP
954
n
261
ASP
954
A
ALA
955
n
262
ALA
955
A
ASP
956
n
263
ASP
956
A
SER
957
n
264
SER
957
A
ARG
958
n
265
ARG
958
A
PRO
959
n
266
PRO
959
A
LYS
960
n
267
LYS
960
A
PHE
961
n
268
PHE
961
A
ARG
962
n
269
ARG
962
A
GLU
963
n
270
GLU
963
A
LEU
964
n
271
LEU
964
A
ILE
965
n
272
ILE
965
A
ILE
966
n
273
ILE
966
A
GLU
967
n
274
GLU
967
A
PHE
968
n
275
PHE
968
A
SER
969
n
276
SER
969
A
LYS
970
n
277
LYS
970
A
MET
971
n
278
MET
971
A
ALA
972
n
279
ALA
972
A
ARG
973
n
280
ARG
973
A
ASP
974
n
281
ASP
974
A
PRO
975
n
282
PRO
975
A
GLN
976
n
283
GLN
976
A
ARG
977
n
284
ARG
977
A
TYR
978
n
285
TYR
978
A
LEU
979
n
286
LEU
979
A
VAL
980
n
287
VAL
980
A
ILE
981
n
288
ILE
981
A
GLN
982
n
289
GLN
982
A
GLY
983
n
290
GLY
983
A
ASP
984
n
291
ASP
984
A
GLU
985
n
292
GLU
985
A
ARG
986
n
293
ARG
986
A
MET
987
n
294
MET
987
A
HIS
988
n
295
HIS
988
A
LEU
989
n
296
LEU
989
A
PRO
990
n
297
PRO
990
A
n
298
991
A
n
299
992
A
n
300
993
A
n
301
994
A
n
302
995
A
n
303
996
A
n
304
997
A
n
305
998
A
n
306
999
A
n
307
1000
A
n
308
1001
A
n
309
1002
A
n
310
1003
A
n
311
1004
A
n
312
1005
A
ASP
1006
n
313
ASP
1006
A
MET
1007
n
314
MET
1007
A
ASP
1008
n
315
ASP
1008
A
ASP
1009
n
316
ASP
1009
A
VAL
1010
n
317
VAL
1010
A
VAL
1011
n
318
VAL
1011
A
ASP
1012
n
319
ASP
1012
A
ALA
1013
n
320
ALA
1013
A
ASP
1014
n
321
ASP
1014
A
GLU
1015
n
322
GLU
1015
A
TYR
1016
n
323
TYR
1016
A
LEU
1017
n
324
LEU
1017
A
ILE
1018
n
325
ILE
1018
A
n
326
1019
A
n
327
1020
A
n
328
1021
A
n
329
1022
A
0.476
0.012
0.298
664
5.1
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
718
A
N
LEU
25
A
O
VAL
726
A
O
VAL
33
A
N
TRP
731
A
N
TRP
38
A
O
ILE
740
A
O
ILE
47
A
N
LYS
745
A
N
LYS
52
A
O
LEU
788
A
O
LEU
95
A
O
ILE
789
A
O
ILE
96
A
N
LEU
778
A
N
LEU
85
A
N
VAL
834
A
N
VAL
141
A
O
LYS
860
A
O
LYS
167
A
N
LEU
844
A
N
LEU
151
A
O
LYS
852
A
O
LYS
159
1
A
C26
1C9
9001
B
C26
1C9
1
1
N
1
A
C24
1C9
9001
B
C24
1C9
1
1
N
1
A
C23
1C9
9001
B
C23
1C9
1
1
N
1
A
C25
1C9
9001
B
C25
1C9
1
1
N
1
A
N33
1C9
9001
B
N33
1C9
1
1
N
1
A
O27
1C9
9001
B
O27
1C9
1
1
N
1
A
C30
1C9
9001
B
C30
1C9
1
1
N
1
A
C31
1C9
9001
B
C31
1C9
1
1
N
1
A
C32
1C9
9001
B
C32
1C9
1
1
N
1
A
C33
1C9
9001
B
C33
1C9
1
1
N
1
A
C34
1C9
9001
B
C34
1C9
1
1
N
1
A
GLY
694
A
GLY
1
1
Y
1
A
GLY
721
A
GLY
28
1
Y
1
A
ALA
722
A
ALA
29
1
Y
1
A
PHE
723
A
PHE
30
1
Y
1
A
ARG
748
A
ARG
55
1
Y
1
A
GLU
749
A
GLU
56
1
Y
1
A
SER
991
A
SER
298
1
Y
1
A
PRO
992
A
PRO
299
1
Y
1
A
THR
993
A
THR
300
1
Y
1
A
ASP
994
A
ASP
301
1
Y
1
A
SER
995
A
SER
302
1
Y
1
A
ASN
996
A
ASN
303
1
Y
1
A
PHE
997
A
PHE
304
1
Y
1
A
TYR
998
A
TYR
305
1
Y
1
A
ARG
999
A
ARG
306
1
Y
1
A
ALA
1000
A
ALA
307
1
Y
1
A
LEU
1001
A
LEU
308
1
Y
1
A
MET
1002
A
MET
309
1
Y
1
A
ASP
1003
A
ASP
310
1
Y
1
A
GLU
1004
A
GLU
311
1
Y
1
A
GLU
1005
A
GLU
312
1
Y
1
A
PRO
1019
A
PRO
326
1
Y
1
A
GLN
1020
A
GLN
327
1
Y
1
A
GLN
1021
A
GLN
328
1
Y
1
A
GLY
1022
A
GLY
329
1
Y
1
A
LYS
713
-145.52
48.58
1
A
LYS
714
-32.83
128.11
1
A
LYS
716
177.60
149.45
1
A
GLU
746
-116.92
-146.99
1
A
LEU
782
-95.25
48.49
1
A
SER
784
-12.36
-60.15
1
A
LYS
806
-21.89
-50.21
1
A
ASP
837
-150.79
43.96
1
A
ASP
855
62.68
72.46
1
A
LEU
858
-155.25
-1.34
1
A
GLU
865
-150.06
-9.64
1
A
LYS
867
-114.30
50.53
1
A
GLU
868
174.55
173.71
1
A
GLU
872
-142.72
-127.24
1
A
ARG
889
39.51
47.61
1
A
ARG
986
-104.06
60.73
protein_rep.para
protein.top
dna-rna_rep.para
dna-rna.top
water_rep.param
water.top
ion.param
ion.top
lig.param
lig.top
67.1
0.00
0.00
0.00
0.00
0.00
0.00
0.279
0.011
0.226
0.229
2.80
19.92
658
13013
12873
5.1
98.9
RANDOM
2762218.05
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
Engh & Huber
FLAT MODEL
33.1272
0.316722
0.54
0.38
5.00
0.51
0.41
2.80
19.92
0
2451
22
0
2429
0.007
0.9
22.1
0.74
1.79
1.50
3.22
2.00
2.09
2.00
3.32
2.50
1
NONE
1
X-RAY DIFFRACTION
0.383
0.037
0.314
2.98
109
2008
6
5.1
99.1
78.8
2.8
20
4I23
13020
13020
0
0
0.076
1
26.5
9.91
100
0.579
2.8
2.9
5.5
1
10.1
100
data collection
ADSC
Quantum
refinement
CNX
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
CNX
Crystal structure of the wild-type EGFR kinase domain in complex with dacomitinib (soaked)
1
N
N
2
N
N
A
LYS
708
A
LYS
15
HELX_P
A
PHE
712
A
PHE
19
5
1
5
A
LYS
754
A
LYS
61
HELX_P
A
ALA
767
A
ALA
74
1
2
14
A
CYS
797
A
CYS
104
HELX_P
A
LYS
806
A
LYS
113
1
3
10
A
ASP
807
A
ASP
114
HELX_P
A
ILE
809
A
ILE
116
5
4
3
A
GLY
810
A
GLY
117
HELX_P
A
ARG
831
A
ARG
138
1
5
22
A
ALA
839
A
ALA
146
HELX_P
A
ARG
841
A
ARG
148
5
6
3
A
PRO
877
A
PRO
184
HELX_P
A
MET
881
A
MET
188
5
7
5
A
LEU
883
A
LEU
190
HELX_P
A
HIS
888
A
HIS
195
1
8
6
A
THR
892
A
THR
199
HELX_P
A
THR
909
A
THR
216
1
9
18
A
PRO
919
A
PRO
226
HELX_P
A
LEU
927
A
LEU
234
1
10
9
A
THR
940
A
THR
247
HELX_P
A
CYS
950
A
CYS
257
1
11
11
A
ASP
954
A
ASP
261
HELX_P
A
ARG
958
A
ARG
265
5
12
5
A
LYS
960
A
LYS
267
HELX_P
A
ASP
974
A
ASP
281
1
13
15
A
PRO
975
A
PRO
282
HELX_P
A
TYR
978
A
TYR
285
5
14
4
A
ASP
1012
A
ASP
319
HELX_P
A
TYR
1016
A
TYR
323
5
15
5
TRANSFERASE
Kinase domain, Phosphotransfer, ATP binding, TRANSFERASE
EGFR_HUMAN
UNP
1
695
P00533
SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV
CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT
DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP
QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDMDDVVDAD
EYLIPQQG
695
1022
4I23
695
1022
P00533
A
1
2
329
1
expression tag
GLY
694
4I23
A
P00533
UNP
1
5
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
716
A
LYS
23
A
GLY
719
A
GLY
26
A
THR
725
A
THR
32
A
TRP
731
A
TRP
38
A
ILE
740
A
ILE
47
A
GLU
746
A
GLU
53
A
VAL
786
A
VAL
93
A
GLN
791
A
GLN
98
A
LEU
777
A
LEU
84
A
LEU
782
A
LEU
89
A
LEU
833
A
LEU
140
A
VAL
834
A
VAL
141
A
LYS
860
A
LYS
167
A
LEU
861
A
LEU
168
A
VAL
843
A
VAL
150
A
THR
847
A
THR
154
A
HIS
850
A
HIS
157
A
ILE
853
A
ILE
160
BINDING SITE FOR RESIDUE 1C9 A 9001
A
1C9
9001
Software
11
A
LEU
718
A
LEU
25
11
1_555
A
ALA
743
A
ALA
50
11
1_555
A
LYS
745
A
LYS
52
11
1_555
A
GLU
762
A
GLU
69
11
1_555
A
MET
766
A
MET
73
11
1_555
A
LEU
788
A
LEU
95
11
1_555
A
THR
790
A
THR
97
11
1_555
A
GLN
791
A
GLN
98
11
1_555
A
MET
793
A
MET
100
11
1_555
A
PRO
794
A
PRO
101
11
1_555
A
GLY
796
A
GLY
103
11
1_555
197
I 2 3