0.007609 0.004393 0.000000 0.000000 0.008786 0.000000 0.000000 0.000000 0.025121 0.00000 0.00000 0.00000 Yamini, S. Kushwaha, G.S. Bhushan, A. Sinha, M. Kaur, P. Sharma, S. Singh, T.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 9 90.00 90.00 120.00 131.428 131.428 39.808 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C6 H7 N5 O 165.153 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one non-polymer C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N C Y 237 N N Y 238 N C Y 239 N N Y 240 N C N 241 N C N 242 N O N 243 N N N 244 N C N 245 N N N 246 N N Y 247 N C N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 R C N 256 R C N 257 R C N 258 S C N 259 R C N 260 N C N 261 N C N 262 N C N 263 N N N 264 N O N 265 N O N 266 N O N 267 N O N 268 N O N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C N 313 N C N 314 N C N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C N 330 N O N 331 N O N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 R C N 344 N O N 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N N Y 365 N C Y 366 N C Y 367 N C Y 368 N C Y 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C Y 393 N C N 394 N O N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N N N 408 S C N 409 N C N 410 N O N 411 N C N 412 N C N 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing Y 228 N doub Y 229 N sing Y 230 N sing N 231 N sing Y 232 N sing Y 233 N doub N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N doub N 290 N sing Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N doub N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing Y 354 N doub Y 355 N sing Y 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N sing Y 363 N doub N 364 N sing Y 365 N doub N 366 N sing Y 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing Y 382 N doub Y 383 N sing Y 384 N sing N 385 N sing Y 386 N doub N 387 N sing Y 388 N doub N 389 N sing Y 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing US Proteins PSFGEY 0867 0887-3585 81 896 905 10.1002/prot.24248 23280611 First structural evidence of sequestration of mRNA cap structures by type 1 ribosome inactivating protein from Momordica balsamina. 2013 10.2210/pdb4i47/pdb pdb_00004i47 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 77 1 MIRROR IMAGE PLATE 2009-07-21 MAR scanner 345 mm plate GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.0 ROTATING ANODE RIGAKU RU300 27093.756 rRNA N-glycosidase 3.2.2.22 1 nat polymer 424.401 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 165.153 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one 1 syn non-polymer 18.015 water 111 nat water no no DVSFRLSGADPSSYGMFIKDLRNALPHTEKVYNIPLLLPSVSGAGRYLLMHLFNYDGNTITVAVDVTNVYIMGYLALTTS YFFNEPAADLASQYVFRSARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDTAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSSATISLENSWSGLSKQIQLAQGNNGVFRTPTVLVDSKGNRVQITNVTSNVVTSNIQLL LNTKNI DVSFRLSGADPSSYGMFIKDLRNALPHTEKVYNIPLLLPSVSGAGRYLLMHLFNYDGNTITVAVDVTNVYIMGYLALTTS YFFNEPAADLASQYVFRSARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDTAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSSATISLENSWSGLSKQIQLAQGNNGVFRTPTVLVDSKGNRVQITNVTSNVVTSNIQLL LNTKNI A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bitter gourd sample 3672 Momordica balsamina 1 2.44 49.63 VAPOR DIFFUSION, HANGING DROP 7.0 PEG, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_validate_close_contact struct_asym struct_conn struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Advisory Atomic model Data collection Derived calculations Structure summary Data collection Database references Refinement description Structure summary 1 0 2012-12-12 1 1 2013-05-15 2 0 2020-07-29 2 1 2023-11-08 _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession A NAG 301 n B NAG 1 A NAG 302 n B NAG 2 DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc RCSB Y PDBJ 2012-11-27 REL REL oligosaccharide DGlcpNAcb1-4DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 2 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing n n MY6 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one HOH water 3S9Q PDB experimental model MY6 247 3 MY6 MY6 303 A HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 428 4 HOH HOH 428 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 431 4 HOH HOH 431 A HOH 432 4 HOH HOH 432 A HOH 433 4 HOH HOH 433 A HOH 434 4 HOH HOH 434 A HOH 435 4 HOH HOH 435 A HOH 436 4 HOH HOH 436 A HOH 437 4 HOH HOH 437 A HOH 438 4 HOH HOH 438 A HOH 439 4 HOH HOH 439 A HOH 440 4 HOH HOH 440 A HOH 441 4 HOH HOH 441 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 449 4 HOH HOH 449 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 462 4 HOH HOH 462 A HOH 463 4 HOH HOH 463 A HOH 464 4 HOH HOH 464 A HOH 465 4 HOH HOH 465 A HOH 466 4 HOH HOH 466 A HOH 467 4 HOH HOH 467 A HOH 468 4 HOH HOH 468 A HOH 469 4 HOH HOH 469 A HOH 470 4 HOH HOH 470 A HOH 471 4 HOH HOH 471 A HOH 472 4 HOH HOH 472 A HOH 473 4 HOH HOH 473 A HOH 474 4 HOH HOH 474 A HOH 475 4 HOH HOH 475 A HOH 476 4 HOH HOH 476 A HOH 477 4 HOH HOH 477 A HOH 478 4 HOH HOH 478 A HOH 479 4 HOH HOH 479 A HOH 480 4 HOH HOH 480 A HOH 481 4 HOH HOH 481 A HOH 482 4 HOH HOH 482 A HOH 483 4 HOH HOH 483 A HOH 484 4 HOH HOH 484 A HOH 485 4 HOH HOH 485 A HOH 486 4 HOH HOH 486 A HOH 487 4 HOH HOH 487 A HOH 488 4 HOH HOH 488 A HOH 489 4 HOH HOH 489 A HOH 490 4 HOH HOH 490 A HOH 491 4 HOH HOH 491 A HOH 492 4 HOH HOH 492 A HOH 493 4 HOH HOH 493 A HOH 494 4 HOH HOH 494 A HOH 495 4 HOH HOH 495 A HOH 496 4 HOH HOH 496 A HOH 497 4 HOH HOH 497 A HOH 498 4 HOH HOH 498 A HOH 499 4 HOH HOH 499 A HOH 500 4 HOH HOH 500 A HOH 501 4 HOH HOH 501 A HOH 502 4 HOH HOH 502 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 510 4 HOH HOH 510 A HOH 511 4 HOH HOH 511 A ASP 1 n 1 ASP 1 A VAL 2 n 2 VAL 2 A SER 3 n 3 SER 3 A PHE 4 n 4 PHE 4 A ARG 5 n 5 ARG 5 A LEU 6 n 6 LEU 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A ALA 9 n 9 ALA 9 A ASP 10 n 10 ASP 10 A PRO 11 n 11 PRO 11 A SER 12 n 12 SER 12 A SER 13 n 13 SER 13 A TYR 14 n 14 TYR 14 A GLY 15 n 15 GLY 15 A MET 16 n 16 MET 16 A PHE 17 n 17 PHE 17 A ILE 18 n 18 ILE 18 A LYS 19 n 19 LYS 19 A ASP 20 n 20 ASP 20 A LEU 21 n 21 LEU 21 A ARG 22 n 22 ARG 22 A ASN 23 n 23 ASN 23 A ALA 24 n 24 ALA 24 A LEU 25 n 25 LEU 25 A PRO 26 n 26 PRO 26 A HIS 27 n 27 HIS 27 A THR 28 n 28 THR 28 A GLU 29 n 29 GLU 29 A LYS 30 n 30 LYS 30 A VAL 31 n 31 VAL 31 A TYR 32 n 32 TYR 32 A ASN 33 n 33 ASN 33 A ILE 34 n 34 ILE 34 A PRO 35 n 35 PRO 35 A LEU 36 n 36 LEU 36 A LEU 37 n 37 LEU 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A SER 40 n 40 SER 40 A VAL 41 n 41 VAL 41 A SER 42 n 42 SER 42 A GLY 43 n 43 GLY 43 A ALA 44 n 44 ALA 44 A GLY 45 n 45 GLY 45 A ARG 46 n 46 ARG 46 A TYR 47 n 47 TYR 47 A LEU 48 n 48 LEU 48 A LEU 49 n 49 LEU 49 A MET 50 n 50 MET 50 A HIS 51 n 51 HIS 51 A LEU 52 n 52 LEU 52 A PHE 53 n 53 PHE 53 A ASN 54 n 54 ASN 54 A TYR 55 n 55 TYR 55 A ASP 56 n 56 ASP 56 A GLY 57 n 57 GLY 57 A ASN 58 n 58 ASN 58 A THR 59 n 59 THR 59 A ILE 60 n 60 ILE 60 A THR 61 n 61 THR 61 A VAL 62 n 62 VAL 62 A ALA 63 n 63 ALA 63 A VAL 64 n 64 VAL 64 A ASP 65 n 65 ASP 65 A VAL 66 n 66 VAL 66 A THR 67 n 67 THR 67 A ASN 68 n 68 ASN 68 A VAL 69 n 69 VAL 69 A TYR 70 n 70 TYR 70 A ILE 71 n 71 ILE 71 A MET 72 n 72 MET 72 A GLY 73 n 73 GLY 73 A TYR 74 n 74 TYR 74 A LEU 75 n 75 LEU 75 A ALA 76 n 76 ALA 76 A LEU 77 n 77 LEU 77 A THR 78 n 78 THR 78 A THR 79 n 79 THR 79 A SER 80 n 80 SER 80 A TYR 81 n 81 TYR 81 A PHE 82 n 82 PHE 82 A PHE 83 n 83 PHE 83 A ASN 84 n 84 ASN 84 A GLU 85 n 85 GLU 85 A PRO 86 n 86 PRO 86 A ALA 87 n 87 ALA 87 A ALA 88 n 88 ALA 88 A ASP 89 n 89 ASP 89 A LEU 90 n 90 LEU 90 A ALA 91 n 91 ALA 91 A SER 92 n 92 SER 92 A GLN 93 n 93 GLN 93 A TYR 94 n 94 TYR 94 A VAL 95 n 95 VAL 95 A PHE 96 n 96 PHE 96 A ARG 97 n 97 ARG 97 A SER 98 n 98 SER 98 A ALA 99 n 99 ALA 99 A ARG 100 n 100 ARG 100 A ARG 101 n 101 ARG 101 A LYS 102 n 102 LYS 102 A ILE 103 n 103 ILE 103 A THR 104 n 104 THR 104 A LEU 105 n 105 LEU 105 A PRO 106 n 106 PRO 106 A TYR 107 n 107 TYR 107 A SER 108 n 108 SER 108 A GLY 109 n 109 GLY 109 A ASN 110 n 110 ASN 110 A TYR 111 n 111 TYR 111 A GLU 112 n 112 GLU 112 A ARG 113 n 113 ARG 113 A LEU 114 n 114 LEU 114 A GLN 115 n 115 GLN 115 A ILE 116 n 116 ILE 116 A ALA 117 n 117 ALA 117 A ALA 118 n 118 ALA 118 A GLY 119 n 119 GLY 119 A LYS 120 n 120 LYS 120 A PRO 121 n 121 PRO 121 A ARG 122 n 122 ARG 122 A GLU 123 n 123 GLU 123 A LYS 124 n 124 LYS 124 A ILE 125 n 125 ILE 125 A PRO 126 n 126 PRO 126 A ILE 127 n 127 ILE 127 A GLY 128 n 128 GLY 128 A LEU 129 n 129 LEU 129 A PRO 130 n 130 PRO 130 A ALA 131 n 131 ALA 131 A LEU 132 n 132 LEU 132 A ASP 133 n 133 ASP 133 A THR 134 n 134 THR 134 A ALA 135 n 135 ALA 135 A ILE 136 n 136 ILE 136 A SER 137 n 137 SER 137 A THR 138 n 138 THR 138 A LEU 139 n 139 LEU 139 A LEU 140 n 140 LEU 140 A HIS 141 n 141 HIS 141 A TYR 142 n 142 TYR 142 A ASP 143 n 143 ASP 143 A SER 144 n 144 SER 144 A THR 145 n 145 THR 145 A ALA 146 n 146 ALA 146 A ALA 147 n 147 ALA 147 A ALA 148 n 148 ALA 148 A GLY 149 n 149 GLY 149 A ALA 150 n 150 ALA 150 A LEU 151 n 151 LEU 151 A LEU 152 n 152 LEU 152 A VAL 153 n 153 VAL 153 A LEU 154 n 154 LEU 154 A ILE 155 n 155 ILE 155 A GLN 156 n 156 GLN 156 A THR 157 n 157 THR 157 A THR 158 n 158 THR 158 A ALA 159 n 159 ALA 159 A GLU 160 n 160 GLU 160 A ALA 161 n 161 ALA 161 A ALA 162 n 162 ALA 162 A ARG 163 n 163 ARG 163 A PHE 164 n 164 PHE 164 A LYS 165 n 165 LYS 165 A TYR 166 n 166 TYR 166 A ILE 167 n 167 ILE 167 A GLU 168 n 168 GLU 168 A GLN 169 n 169 GLN 169 A GLN 170 n 170 GLN 170 A ILE 171 n 171 ILE 171 A GLN 172 n 172 GLN 172 A GLU 173 n 173 GLU 173 A ARG 174 n 174 ARG 174 A ALA 175 n 175 ALA 175 A TYR 176 n 176 TYR 176 A ARG 177 n 177 ARG 177 A ASP 178 n 178 ASP 178 A GLU 179 n 179 GLU 179 A VAL 180 n 180 VAL 180 A PRO 181 n 181 PRO 181 A SER 182 n 182 SER 182 A SER 183 n 183 SER 183 A ALA 184 n 184 ALA 184 A THR 185 n 185 THR 185 A ILE 186 n 186 ILE 186 A SER 187 n 187 SER 187 A LEU 188 n 188 LEU 188 A GLU 189 n 189 GLU 189 A ASN 190 n 190 ASN 190 A SER 191 n 191 SER 191 A TRP 192 n 192 TRP 192 A SER 193 n 193 SER 193 A GLY 194 n 194 GLY 194 A LEU 195 n 195 LEU 195 A SER 196 n 196 SER 196 A LYS 197 n 197 LYS 197 A GLN 198 n 198 GLN 198 A ILE 199 n 199 ILE 199 A GLN 200 n 200 GLN 200 A LEU 201 n 201 LEU 201 A ALA 202 n 202 ALA 202 A GLN 203 n 203 GLN 203 A GLY 204 n 204 GLY 204 A ASN 205 n 205 ASN 205 A ASN 206 n 206 ASN 206 A GLY 207 n 207 GLY 207 A VAL 208 n 208 VAL 208 A PHE 209 n 209 PHE 209 A ARG 210 n 210 ARG 210 A THR 211 n 211 THR 211 A PRO 212 n 212 PRO 212 A THR 213 n 213 THR 213 A VAL 214 n 214 VAL 214 A LEU 215 n 215 LEU 215 A VAL 216 n 216 VAL 216 A ASP 217 n 217 ASP 217 A SER 218 n 218 SER 218 A LYS 219 n 219 LYS 219 A GLY 220 n 220 GLY 220 A ASN 221 n 221 ASN 221 A ARG 222 n 222 ARG 222 A VAL 223 n 223 VAL 223 A GLN 224 n 224 GLN 224 A ILE 225 n 225 ILE 225 A THR 226 n 226 THR 226 A ASN 227 n 227 ASN 227 A VAL 228 n 228 VAL 228 A THR 229 n 229 THR 229 A SER 230 n 230 SER 230 A ASN 231 n 231 ASN 231 A VAL 232 n 232 VAL 232 A VAL 233 n 233 VAL 233 A THR 234 n 234 THR 234 A SER 235 n 235 SER 235 A ASN 236 n 236 ASN 236 A ILE 237 n 237 ILE 237 A GLN 238 n 238 GLN 238 A LEU 239 n 239 LEU 239 A LEU 240 n 240 LEU 240 A LEU 241 n 241 LEU 241 A ASN 242 n 242 ASN 242 A THR 243 n 243 THR 243 A LYS 244 n 244 LYS 244 A ASN 245 n 245 ASN 245 A ILE 246 n 246 ILE 246 A author_and_software_defined_assembly PISA 1 monomeric A ASN 227 GLYCOSYLATION SITE A ASN 227 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 2 A N VAL 2 A O HIS 51 A O HIS 51 A N LEU 48 A N LEU 48 A O VAL 64 A O VAL 64 A N ALA 63 A N ALA 63 A O MET 72 A O MET 72 A N TYR 74 A N TYR 74 A O TYR 81 A O TYR 81 A N SER 80 A N SER 80 A O ILE 103 A O ILE 103 A N VAL 31 A N VAL 31 A O ILE 34 A O ILE 34 A N LEU 215 A N LEU 215 A O VAL 223 A O VAL 223 1 B B O4 O5 NAG NAG 1 2 2.11 1 A ASN 33 86.38 -0.51 1 A ASN 68 -142.54 -19.63 1 A LEU 77 56.54 -114.15 1 A PRO 106 -72.27 22.76 1 A ASP 143 179.26 96.76 1 A THR 158 -126.35 -82.16 1 A ASN 236 -90.31 -68.54 41.865 -2.51 -1.25 0.00 -2.51 0.00 3.76 0.961 0.937 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.19926 0.16546 0.170 0.16700 2.65 19.61 343 7364 7364 4.7 99.06 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.292 0.80 0.80 1.40 3S9Q MAXIMUM LIKELIHOOD MASK 2.65 19.61 111 2062 40 0 1911 0.009 1.556 1.993 36.309 16.583 19.480 0.106 0.022 0.301 0.277 2.719 23 497 20 98.67 0.535 2.65 19.76 4I47 7364 7364 0.0 0.0 0.10 1 9.3 99.3 0.586 2.65 2.74 2.0 1 98.9 phasing AMoRE refinement REFMAC 5.5.0109 data reduction AUTOMAR data scaling SCALEPACK Crystal structure of the Ribosome inactivating protein complexed with methylated guanine 1 N N 2 N N 3 N N 4 N N A ASP 10 A ASP 10 HELX_P A LEU 25 A LEU 25 1 1 16 A SER 42 A SER 42 HELX_P A GLY 45 A GLY 45 5 2 4 A GLU 85 A GLU 85 HELX_P A SER 92 A SER 92 1 3 8 A ASN 110 A ASN 110 HELX_P A GLY 119 A GLY 119 1 4 10 A PRO 121 A PRO 121 HELX_P A ILE 125 A ILE 125 5 5 5 A GLY 128 A GLY 128 HELX_P A LEU 140 A LEU 140 1 6 13 A ASP 143 A ASP 143 HELX_P A THR 158 A THR 158 1 7 16 A THR 158 A THR 158 HELX_P A PHE 164 A PHE 164 1 8 7 A PHE 164 A PHE 164 HELX_P A ARG 174 A ARG 174 1 9 11 A SER 182 A SER 182 HELX_P A ALA 202 A ALA 202 1 10 21 A SER 230 A SER 230 HELX_P A SER 235 A SER 235 1 11 6 A ASN 242 A ASN 242 HELX_P A ILE 246 A ILE 246 5 12 5 covale 1.455 one N-Glycosylation A ASN 227 A ND2 ASN 227 1_555 B NAG 1 B C1 NAG 1_555 covale 1.416 both B NAG 1 B O4 NAG 1_555 B NAG 2 B C1 NAG 1_555 HYDROLASE Ligand binding, Hydrolase, Ribosome inactivating protein, N7-methylated guanine D9J2T9_MOMBA UNP 1 1 D9J2T9 DVSFRLSGADPSSYGMFIKDLRNALPHTEKVYNIPLLLPSVSGAGRYLLMHLFNYDGNTITVAVDVTNVYIMGYLALTTS YFFNEPAADLASQYVFRSARRKITLPYSGNYERLQIAAGKPREKIPIGLPALDTAISTLLHYDSTAAAGALLVLIQTTAE AARFKYIEQQIQERAYRDEVPSSATISLENSWSGLSKQIQLAQGNNGVFRTPTVLVDSKGNRVQITNVTSNVVTSNIQLL LNTKNI 1 246 4I47 1 246 D9J2T9 A 1 1 246 6 2 2 parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A VAL 2 A VAL 2 A ARG 5 A ARG 5 A TYR 47 A TYR 47 A PHE 53 A PHE 53 A THR 59 A THR 59 A ASP 65 A ASP 65 A ILE 71 A ILE 71 A ALA 76 A ALA 76 A THR 79 A THR 79 A PHE 82 A PHE 82 A ARG 101 A ARG 101 A THR 104 A THR 104 A LYS 30 A LYS 30 A VAL 31 A VAL 31 A ILE 34 A ILE 34 A PRO 35 A PRO 35 A VAL 208 A VAL 208 A VAL 216 A VAL 216 A ARG 222 A ARG 222 A ASN 227 A ASN 227 146 H 3