0.013752
0.000000
0.008456
0.000000
0.011507
0.000000
0.000000
0.000000
0.021241
0.00000
0.00000
0.00000
Kim, Y.
Bigelow, L.
Clancy, S.
Babnigg, J.
Bingman, C.A.
Yennamalli, R.
Lohman, J.R.
Ma, M.
Shen, B.
Phillips Jr., G.N.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
Enzyme Discovery for Natural Product Biosynthesis (NatPro)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
121.58
90.00
72.715
86.901
55.265
C10 H22 O6
238.278
PENTAETHYLENE GLYCOL
PEG400
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H8 O7
192.124
CITRIC ACID
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C8 H18 O5
194.226
TETRAETHYLENE GLYCOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
J Antibiot (Tokyo)
0353
69
731
740
10.1038/ja.2016.88
27406907
Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027.
2016
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2012-04-15
ADSC QUANTUM 315r
double crystal monochromator
SAD
M
x-ray
1
0.97921
1.0
19-ID
APS
0.97921
SYNCHROTRON
APS BEAMLINE 19-ID
15018.234
uncharacterized protein SgcJ
SgcJ
2
man
polymer
192.124
CITRIC ACID
2
syn
non-polymer
194.226
TETRAETHYLENE GLYCOL
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
238.278
PENTAETHYLENE GLYCOL
1
syn
non-polymer
18.015
water
210
nat
water
no
yes
SNA(MSE)TSTDSITSAPDAALAAVAALPARIVAAWADHDADRFADVFAEDGT(MSE)ILPGLFRKGRENIRTH(MSE)A
AAFAGPYKGTRVIGSPIDARLLGDGIALLITEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAAYQNSPRGND
SNAMTSTDSITSAPDAALAAVAALPARIVAAWADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGPYKGTRV
IGSPIDARLLGDGIALLITEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAAYQNSPRGND
A,B
MCSG-APC109082
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
C-1027
sample
1172567
Streptomyces globisporus
562
Escherichia coli
BL21 gold
plasmid
pMCSG57
1
2.48
50.33
VAPOR DIFFUSION, SITTING DROP
4.2
0.1 M disodium hydrogen phosphate citric acid pH 4.2, 40 %(w/v)
PEG300, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Midwest Center for Structural Genomics
MCSG
PSI:Biology
Enzyme Discovery for Natural Product Biosynthesis
NatPro
PSI:Biology
repository
Initial release
Other
Database references
Structure summary
1
0
2012-12-12
1
1
2013-07-31
1
2
2016-11-16
1
3
2016-12-07
Y
RCSB
Y
RCSB
2012-11-27
REL
REL
CIT
CITRIC ACID
PG4
TETRAETHYLENE GLYCOL
GOL
GLYCEROL
PO4
PHOSPHATE ION
1PE
PENTAETHYLENE GLYCOL
HOH
water
CIT
151
2
CIT
CIT
201
A
PG4
152
3
PG4
PG4
202
A
GOL
155
4
GOL
GOL
203
A
PO4
153
5
PO4
PO4
204
A
CIT
151
2
CIT
CIT
201
B
1PE
152
6
1PE
1PE
202
B
HOH
2
7
HOH
HOH
301
A
HOH
3
7
HOH
HOH
302
A
HOH
4
7
HOH
HOH
303
A
HOH
5
7
HOH
HOH
304
A
HOH
7
7
HOH
HOH
305
A
HOH
8
7
HOH
HOH
306
A
HOH
10
7
HOH
HOH
307
A
HOH
11
7
HOH
HOH
308
A
HOH
13
7
HOH
HOH
309
A
HOH
17
7
HOH
HOH
310
A
HOH
18
7
HOH
HOH
311
A
HOH
22
7
HOH
HOH
312
A
HOH
24
7
HOH
HOH
313
A
HOH
25
7
HOH
HOH
314
A
HOH
27
7
HOH
HOH
315
A
HOH
28
7
HOH
HOH
316
A
HOH
30
7
HOH
HOH
317
A
HOH
31
7
HOH
HOH
318
A
HOH
32
7
HOH
HOH
319
A
HOH
35
7
HOH
HOH
320
A
HOH
36
7
HOH
HOH
321
A
HOH
37
7
HOH
HOH
322
A
HOH
38
7
HOH
HOH
323
A
HOH
39
7
HOH
HOH
324
A
HOH
40
7
HOH
HOH
325
A
HOH
42
7
HOH
HOH
326
A
HOH
43
7
HOH
HOH
327
A
HOH
46
7
HOH
HOH
328
A
HOH
49
7
HOH
HOH
329
A
HOH
51
7
HOH
HOH
330
A
HOH
53
7
HOH
HOH
331
A
HOH
54
7
HOH
HOH
332
A
HOH
55
7
HOH
HOH
333
A
HOH
56
7
HOH
HOH
334
A
HOH
58
7
HOH
HOH
335
A
HOH
59
7
HOH
HOH
336
A
HOH
60
7
HOH
HOH
337
A
HOH
61
7
HOH
HOH
338
A
HOH
62
7
HOH
HOH
339
A
HOH
66
7
HOH
HOH
340
A
HOH
68
7
HOH
HOH
341
A
HOH
69
7
HOH
HOH
342
A
HOH
70
7
HOH
HOH
343
A
HOH
71
7
HOH
HOH
344
A
HOH
72
7
HOH
HOH
345
A
HOH
73
7
HOH
HOH
346
A
HOH
75
7
HOH
HOH
347
A
HOH
76
7
HOH
HOH
348
A
HOH
78
7
HOH
HOH
349
A
HOH
79
7
HOH
HOH
350
A
HOH
80
7
HOH
HOH
351
A
HOH
81
7
HOH
HOH
352
A
HOH
82
7
HOH
HOH
353
A
HOH
83
7
HOH
HOH
354
A
HOH
84
7
HOH
HOH
355
A
HOH
86
7
HOH
HOH
356
A
HOH
87
7
HOH
HOH
357
A
HOH
89
7
HOH
HOH
358
A
HOH
90
7
HOH
HOH
359
A
HOH
91
7
HOH
HOH
360
A
HOH
92
7
HOH
HOH
361
A
HOH
93
7
HOH
HOH
362
A
HOH
97
7
HOH
HOH
363
A
HOH
98
7
HOH
HOH
364
A
HOH
99
7
HOH
HOH
365
A
HOH
100
7
HOH
HOH
366
A
HOH
101
7
HOH
HOH
367
A
HOH
102
7
HOH
HOH
368
A
HOH
104
7
HOH
HOH
369
A
HOH
105
7
HOH
HOH
370
A
HOH
106
7
HOH
HOH
371
A
HOH
108
7
HOH
HOH
372
A
HOH
112
7
HOH
HOH
373
A
HOH
113
7
HOH
HOH
374
A
HOH
114
7
HOH
HOH
375
A
HOH
115
7
HOH
HOH
376
A
HOH
116
7
HOH
HOH
377
A
HOH
117
7
HOH
HOH
378
A
HOH
129
7
HOH
HOH
379
A
HOH
130
7
HOH
HOH
380
A
HOH
131
7
HOH
HOH
381
A
HOH
132
7
HOH
HOH
382
A
HOH
133
7
HOH
HOH
383
A
HOH
134
7
HOH
HOH
384
A
HOH
135
7
HOH
HOH
385
A
HOH
136
7
HOH
HOH
386
A
HOH
137
7
HOH
HOH
387
A
HOH
138
7
HOH
HOH
388
A
HOH
139
7
HOH
HOH
389
A
HOH
140
7
HOH
HOH
390
A
HOH
145
7
HOH
HOH
391
A
HOH
146
7
HOH
HOH
392
A
HOH
147
7
HOH
HOH
393
A
HOH
148
7
HOH
HOH
394
A
HOH
149
7
HOH
HOH
395
A
HOH
150
7
HOH
HOH
396
A
HOH
151
7
HOH
HOH
397
A
HOH
152
7
HOH
HOH
398
A
HOH
153
7
HOH
HOH
399
A
HOH
154
7
HOH
HOH
400
A
HOH
155
7
HOH
HOH
401
A
HOH
156
7
HOH
HOH
402
A
HOH
157
7
HOH
HOH
403
A
HOH
158
7
HOH
HOH
404
A
HOH
159
7
HOH
HOH
405
A
HOH
160
7
HOH
HOH
406
A
HOH
161
7
HOH
HOH
407
A
HOH
162
7
HOH
HOH
408
A
HOH
163
7
HOH
HOH
409
A
HOH
183
7
HOH
HOH
410
A
HOH
188
7
HOH
HOH
411
A
HOH
189
7
HOH
HOH
412
A
HOH
190
7
HOH
HOH
413
A
HOH
191
7
HOH
HOH
414
A
HOH
192
7
HOH
HOH
415
A
HOH
194
7
HOH
HOH
416
A
HOH
195
7
HOH
HOH
417
A
HOH
198
7
HOH
HOH
418
A
HOH
199
7
HOH
HOH
419
A
HOH
200
7
HOH
HOH
420
A
HOH
201
7
HOH
HOH
421
A
HOH
202
7
HOH
HOH
422
A
HOH
203
7
HOH
HOH
423
A
HOH
204
7
HOH
HOH
424
A
HOH
205
7
HOH
HOH
425
A
HOH
206
7
HOH
HOH
426
A
HOH
207
7
HOH
HOH
427
A
HOH
208
7
HOH
HOH
428
A
HOH
209
7
HOH
HOH
429
A
HOH
210
7
HOH
HOH
430
A
HOH
1
7
HOH
HOH
301
B
HOH
6
7
HOH
HOH
302
B
HOH
9
7
HOH
HOH
303
B
HOH
12
7
HOH
HOH
304
B
HOH
14
7
HOH
HOH
305
B
HOH
15
7
HOH
HOH
306
B
HOH
16
7
HOH
HOH
307
B
HOH
19
7
HOH
HOH
308
B
HOH
20
7
HOH
HOH
309
B
HOH
21
7
HOH
HOH
310
B
HOH
23
7
HOH
HOH
311
B
HOH
26
7
HOH
HOH
312
B
HOH
29
7
HOH
HOH
313
B
HOH
33
7
HOH
HOH
314
B
HOH
34
7
HOH
HOH
315
B
HOH
41
7
HOH
HOH
316
B
HOH
44
7
HOH
HOH
317
B
HOH
45
7
HOH
HOH
318
B
HOH
47
7
HOH
HOH
319
B
HOH
48
7
HOH
HOH
320
B
HOH
50
7
HOH
HOH
321
B
HOH
52
7
HOH
HOH
322
B
HOH
57
7
HOH
HOH
323
B
HOH
63
7
HOH
HOH
324
B
HOH
64
7
HOH
HOH
325
B
HOH
65
7
HOH
HOH
326
B
HOH
67
7
HOH
HOH
327
B
HOH
74
7
HOH
HOH
328
B
HOH
77
7
HOH
HOH
329
B
HOH
85
7
HOH
HOH
330
B
HOH
88
7
HOH
HOH
331
B
HOH
94
7
HOH
HOH
332
B
HOH
95
7
HOH
HOH
333
B
HOH
96
7
HOH
HOH
334
B
HOH
103
7
HOH
HOH
335
B
HOH
107
7
HOH
HOH
336
B
HOH
109
7
HOH
HOH
337
B
HOH
110
7
HOH
HOH
338
B
HOH
111
7
HOH
HOH
339
B
HOH
118
7
HOH
HOH
340
B
HOH
119
7
HOH
HOH
341
B
HOH
120
7
HOH
HOH
342
B
HOH
121
7
HOH
HOH
343
B
HOH
122
7
HOH
HOH
344
B
HOH
123
7
HOH
HOH
345
B
HOH
124
7
HOH
HOH
346
B
HOH
125
7
HOH
HOH
347
B
HOH
126
7
HOH
HOH
348
B
HOH
127
7
HOH
HOH
349
B
HOH
128
7
HOH
HOH
350
B
HOH
141
7
HOH
HOH
351
B
HOH
142
7
HOH
HOH
352
B
HOH
143
7
HOH
HOH
353
B
HOH
144
7
HOH
HOH
354
B
HOH
164
7
HOH
HOH
355
B
HOH
165
7
HOH
HOH
356
B
HOH
166
7
HOH
HOH
357
B
HOH
167
7
HOH
HOH
358
B
HOH
168
7
HOH
HOH
359
B
HOH
169
7
HOH
HOH
360
B
HOH
170
7
HOH
HOH
361
B
HOH
171
7
HOH
HOH
362
B
HOH
172
7
HOH
HOH
363
B
HOH
173
7
HOH
HOH
364
B
HOH
174
7
HOH
HOH
365
B
HOH
175
7
HOH
HOH
366
B
HOH
176
7
HOH
HOH
367
B
HOH
177
7
HOH
HOH
368
B
HOH
178
7
HOH
HOH
369
B
HOH
179
7
HOH
HOH
370
B
HOH
180
7
HOH
HOH
371
B
HOH
181
7
HOH
HOH
372
B
HOH
182
7
HOH
HOH
373
B
HOH
184
7
HOH
HOH
374
B
HOH
185
7
HOH
HOH
375
B
HOH
186
7
HOH
HOH
376
B
HOH
187
7
HOH
HOH
377
B
HOH
193
7
HOH
HOH
378
B
HOH
196
7
HOH
HOH
379
B
HOH
197
7
HOH
HOH
380
B
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
SER
3
n
6
SER
3
A
THR
4
n
7
THR
4
A
ASP
5
n
8
ASP
5
A
SER
6
n
9
SER
6
A
ILE
7
n
10
ILE
7
A
THR
8
n
11
THR
8
A
SER
9
n
12
SER
9
A
ALA
10
n
13
ALA
10
A
PRO
11
n
14
PRO
11
A
ASP
12
n
15
ASP
12
A
ALA
13
n
16
ALA
13
A
ALA
14
n
17
ALA
14
A
LEU
15
n
18
LEU
15
A
ALA
16
n
19
ALA
16
A
ALA
17
n
20
ALA
17
A
VAL
18
n
21
VAL
18
A
ALA
19
n
22
ALA
19
A
ALA
20
n
23
ALA
20
A
LEU
21
n
24
LEU
21
A
PRO
22
n
25
PRO
22
A
ALA
23
n
26
ALA
23
A
ARG
24
n
27
ARG
24
A
ILE
25
n
28
ILE
25
A
VAL
26
n
29
VAL
26
A
ALA
27
n
30
ALA
27
A
ALA
28
n
31
ALA
28
A
TRP
29
n
32
TRP
29
A
ALA
30
n
33
ALA
30
A
ASP
31
n
34
ASP
31
A
HIS
32
n
35
HIS
32
A
ASP
33
n
36
ASP
33
A
ALA
34
n
37
ALA
34
A
ASP
35
n
38
ASP
35
A
ARG
36
n
39
ARG
36
A
PHE
37
n
40
PHE
37
A
ALA
38
n
41
ALA
38
A
ASP
39
n
42
ASP
39
A
VAL
40
n
43
VAL
40
A
PHE
41
n
44
PHE
41
A
ALA
42
n
45
ALA
42
A
GLU
43
n
46
GLU
43
A
ASP
44
n
47
ASP
44
A
GLY
45
n
48
GLY
45
A
THR
46
n
49
THR
46
A
MSE
47
n
50
MSE
47
A
ILE
48
n
51
ILE
48
A
LEU
49
n
52
LEU
49
A
PRO
50
n
53
PRO
50
A
GLY
51
n
54
GLY
51
A
LEU
52
n
55
LEU
52
A
PHE
53
n
56
PHE
53
A
ARG
54
n
57
ARG
54
A
LYS
55
n
58
LYS
55
A
GLY
56
n
59
GLY
56
A
ARG
57
n
60
ARG
57
A
GLU
58
n
61
GLU
58
A
ASN
59
n
62
ASN
59
A
ILE
60
n
63
ILE
60
A
ARG
61
n
64
ARG
61
A
THR
62
n
65
THR
62
A
HIS
63
n
66
HIS
63
A
MSE
64
n
67
MSE
64
A
ALA
65
n
68
ALA
65
A
ALA
66
n
69
ALA
66
A
ALA
67
n
70
ALA
67
A
PHE
68
n
71
PHE
68
A
ALA
69
n
72
ALA
69
A
GLY
70
n
73
GLY
70
A
PRO
71
n
74
PRO
71
A
TYR
72
n
75
TYR
72
A
LYS
73
n
76
LYS
73
A
GLY
74
n
77
GLY
74
A
THR
75
n
78
THR
75
A
ARG
76
n
79
ARG
76
A
VAL
77
n
80
VAL
77
A
ILE
78
n
81
ILE
78
A
GLY
79
n
82
GLY
79
A
SER
80
n
83
SER
80
A
PRO
81
n
84
PRO
81
A
ILE
82
n
85
ILE
82
A
ASP
83
n
86
ASP
83
A
ALA
84
n
87
ALA
84
A
ARG
85
n
88
ARG
85
A
LEU
86
n
89
LEU
86
A
LEU
87
n
90
LEU
87
A
GLY
88
n
91
GLY
88
A
ASP
89
n
92
ASP
89
A
GLY
90
n
93
GLY
90
A
ILE
91
n
94
ILE
91
A
ALA
92
n
95
ALA
92
A
LEU
93
n
96
LEU
93
A
LEU
94
n
97
LEU
94
A
ILE
95
n
98
ILE
95
A
THR
96
n
99
THR
96
A
GLU
97
n
100
GLU
97
A
GLY
98
n
101
GLY
98
A
GLY
99
n
102
GLY
99
A
ILE
100
n
103
ILE
100
A
LEU
101
n
104
LEU
101
A
ALA
102
n
105
ALA
102
A
PRO
103
n
106
PRO
103
A
GLY
104
n
107
GLY
104
A
GLU
105
n
108
GLU
105
A
THR
106
n
109
THR
106
A
GLU
107
n
110
GLU
107
A
ALA
108
n
111
ALA
108
A
SER
109
n
112
SER
109
A
GLY
110
n
113
GLY
110
A
ASP
111
n
114
ASP
111
A
GLY
112
n
115
GLY
112
A
ALA
113
n
116
ALA
113
A
VAL
114
n
117
VAL
114
A
ARG
115
n
118
ARG
115
A
ALA
116
n
119
ALA
116
A
SER
117
n
120
SER
117
A
TRP
118
n
121
TRP
118
A
LEU
119
n
122
LEU
119
A
ALA
120
n
123
ALA
120
A
VAL
121
n
124
VAL
121
A
GLU
122
n
125
GLU
122
A
GLN
123
n
126
GLN
123
A
ASP
124
n
127
ASP
124
A
GLY
125
n
128
GLY
125
A
GLN
126
n
129
GLN
126
A
TRP
127
n
130
TRP
127
A
ARG
128
n
131
ARG
128
A
LEU
129
n
132
LEU
129
A
ALA
130
n
133
ALA
130
A
ALA
131
n
134
ALA
131
A
TYR
132
n
135
TYR
132
A
GLN
133
n
136
GLN
133
A
ASN
134
n
137
ASN
134
A
SER
135
n
138
SER
135
A
PRO
136
n
139
PRO
136
A
ARG
137
n
140
ARG
137
A
GLY
138
n
141
GLY
138
A
ASN
139
n
142
ASN
139
A
ASP
140
n
143
ASP
140
A
n
1
-2
B
n
2
-1
B
n
3
0
B
n
4
1
B
n
5
2
B
n
6
3
B
n
7
4
B
n
8
5
B
n
9
6
B
n
10
7
B
n
11
8
B
n
12
9
B
ALA
10
n
13
ALA
10
B
PRO
11
n
14
PRO
11
B
ASP
12
n
15
ASP
12
B
ALA
13
n
16
ALA
13
B
ALA
14
n
17
ALA
14
B
LEU
15
n
18
LEU
15
B
ALA
16
n
19
ALA
16
B
ALA
17
n
20
ALA
17
B
VAL
18
n
21
VAL
18
B
ALA
19
n
22
ALA
19
B
ALA
20
n
23
ALA
20
B
LEU
21
n
24
LEU
21
B
PRO
22
n
25
PRO
22
B
ALA
23
n
26
ALA
23
B
ARG
24
n
27
ARG
24
B
ILE
25
n
28
ILE
25
B
VAL
26
n
29
VAL
26
B
ALA
27
n
30
ALA
27
B
ALA
28
n
31
ALA
28
B
TRP
29
n
32
TRP
29
B
ALA
30
n
33
ALA
30
B
ASP
31
n
34
ASP
31
B
HIS
32
n
35
HIS
32
B
ASP
33
n
36
ASP
33
B
ALA
34
n
37
ALA
34
B
ASP
35
n
38
ASP
35
B
ARG
36
n
39
ARG
36
B
PHE
37
n
40
PHE
37
B
ALA
38
n
41
ALA
38
B
ASP
39
n
42
ASP
39
B
VAL
40
n
43
VAL
40
B
PHE
41
n
44
PHE
41
B
ALA
42
n
45
ALA
42
B
GLU
43
n
46
GLU
43
B
ASP
44
n
47
ASP
44
B
GLY
45
n
48
GLY
45
B
THR
46
n
49
THR
46
B
MSE
47
n
50
MSE
47
B
ILE
48
n
51
ILE
48
B
LEU
49
n
52
LEU
49
B
PRO
50
n
53
PRO
50
B
GLY
51
n
54
GLY
51
B
LEU
52
n
55
LEU
52
B
PHE
53
n
56
PHE
53
B
ARG
54
n
57
ARG
54
B
LYS
55
n
58
LYS
55
B
GLY
56
n
59
GLY
56
B
ARG
57
n
60
ARG
57
B
GLU
58
n
61
GLU
58
B
ASN
59
n
62
ASN
59
B
ILE
60
n
63
ILE
60
B
ARG
61
n
64
ARG
61
B
THR
62
n
65
THR
62
B
HIS
63
n
66
HIS
63
B
MSE
64
n
67
MSE
64
B
ALA
65
n
68
ALA
65
B
ALA
66
n
69
ALA
66
B
ALA
67
n
70
ALA
67
B
PHE
68
n
71
PHE
68
B
ALA
69
n
72
ALA
69
B
GLY
70
n
73
GLY
70
B
PRO
71
n
74
PRO
71
B
TYR
72
n
75
TYR
72
B
LYS
73
n
76
LYS
73
B
GLY
74
n
77
GLY
74
B
THR
75
n
78
THR
75
B
ARG
76
n
79
ARG
76
B
VAL
77
n
80
VAL
77
B
ILE
78
n
81
ILE
78
B
GLY
79
n
82
GLY
79
B
SER
80
n
83
SER
80
B
PRO
81
n
84
PRO
81
B
ILE
82
n
85
ILE
82
B
ASP
83
n
86
ASP
83
B
ALA
84
n
87
ALA
84
B
ARG
85
n
88
ARG
85
B
LEU
86
n
89
LEU
86
B
LEU
87
n
90
LEU
87
B
GLY
88
n
91
GLY
88
B
ASP
89
n
92
ASP
89
B
GLY
90
n
93
GLY
90
B
ILE
91
n
94
ILE
91
B
ALA
92
n
95
ALA
92
B
LEU
93
n
96
LEU
93
B
LEU
94
n
97
LEU
94
B
ILE
95
n
98
ILE
95
B
THR
96
n
99
THR
96
B
GLU
97
n
100
GLU
97
B
GLY
98
n
101
GLY
98
B
GLY
99
n
102
GLY
99
B
ILE
100
n
103
ILE
100
B
LEU
101
n
104
LEU
101
B
ALA
102
n
105
ALA
102
B
PRO
103
n
106
PRO
103
B
GLY
104
n
107
GLY
104
B
GLU
105
n
108
GLU
105
B
THR
106
n
109
THR
106
B
GLU
107
n
110
GLU
107
B
ALA
108
n
111
ALA
108
B
SER
109
n
112
SER
109
B
GLY
110
n
113
GLY
110
B
ASP
111
n
114
ASP
111
B
GLY
112
n
115
GLY
112
B
ALA
113
n
116
ALA
113
B
VAL
114
n
117
VAL
114
B
ARG
115
n
118
ARG
115
B
ALA
116
n
119
ALA
116
B
SER
117
n
120
SER
117
B
TRP
118
n
121
TRP
118
B
LEU
119
n
122
LEU
119
B
ALA
120
n
123
ALA
120
B
VAL
121
n
124
VAL
121
B
GLU
122
n
125
GLU
122
B
GLN
123
n
126
GLN
123
B
ASP
124
n
127
ASP
124
B
GLY
125
n
128
GLY
125
B
GLN
126
n
129
GLN
126
B
TRP
127
n
130
TRP
127
B
ARG
128
n
131
ARG
128
B
LEU
129
n
132
LEU
129
B
ALA
130
n
133
ALA
130
B
ALA
131
n
134
ALA
131
B
TYR
132
n
135
TYR
132
B
GLN
133
n
136
GLN
133
B
ASN
134
n
137
ASN
134
B
SER
135
n
138
SER
135
B
PRO
136
n
139
PRO
136
B
ARG
137
n
140
ARG
137
B
GLY
138
n
141
GLY
138
B
ASN
139
n
142
ASN
139
B
ASP
140
n
143
ASP
140
B
4.5283
-1.0954
-0.0052
0.2016
0.1134
0.1056
-0.2977
-0.0574
-0.5954
-0.0437
0.3411
0.2732
0.0331
-0.4841
0.0297
0.1460
0.0018
-0.0380
0.3977
0.0794
0.2177
refined
5.9624
72.6702
8.6683
X-RAY DIFFRACTION
1.6544
-0.5394
-0.0049
1.4201
-0.2478
1.9469
-0.0544
0.0465
-0.2024
-0.1445
0.0356
-0.0096
0.1615
-0.1369
0.0139
0.0962
-0.0149
0.0021
0.0856
-0.0153
0.1137
refined
22.9398
72.2800
5.4542
X-RAY DIFFRACTION
2.2932
-0.6343
0.8240
2.5481
-1.5121
3.4167
0.0712
0.2936
-0.2273
0.0351
-0.0558
-0.0328
0.1383
0.1803
-0.0335
0.0603
0.0256
0.0206
0.1277
-0.0206
0.1196
refined
21.4401
75.4128
12.8327
X-RAY DIFFRACTION
3.5717
-0.2344
-0.4547
2.8322
-0.9187
2.7634
0.0905
0.0376
-0.3970
-0.0254
0.0577
0.1312
-0.0312
-0.1363
-0.1274
0.0524
0.0292
0.0082
0.1014
0.0125
0.0930
refined
18.8486
77.9683
8.5877
X-RAY DIFFRACTION
7.0528
2.8624
3.7549
3.1063
2.8812
3.9210
0.0092
0.9632
-0.2452
-0.8840
0.1413
0.2704
-0.3826
0.3865
-0.1603
0.5356
0.1219
-0.0892
0.2422
-0.0368
0.2282
refined
18.1236
98.4552
-1.8220
X-RAY DIFFRACTION
5.3493
1.9831
1.0757
8.1886
-0.2017
3.8292
-0.0695
0.1190
0.6220
-0.2775
-0.2858
0.5824
-0.8748
-0.4271
0.1864
0.3334
0.1255
-0.0036
0.2062
-0.0221
0.1696
refined
15.6992
101.4813
10.0243
X-RAY DIFFRACTION
4.5630
-2.6842
0.2041
4.3842
0.6561
4.1917
-0.1132
-0.1907
0.2176
0.1259
-0.0491
0.0701
-0.1438
-0.4225
0.1548
0.1209
0.0094
-0.0026
0.1267
-0.0266
0.0903
refined
19.2133
90.1153
15.1317
X-RAY DIFFRACTION
6.5319
1.8986
-1.4170
4.2903
0.8852
3.7675
0.1026
-0.4366
0.2546
0.1276
-0.1268
0.1183
-0.4772
-0.1498
0.0430
0.3192
0.0665
0.0194
0.1254
-0.0110
0.1155
refined
21.6572
100.8172
16.2384
X-RAY DIFFRACTION
6.2818
4.1311
2.5959
6.2991
4.1518
5.5756
0.0374
0.3934
0.2028
-0.0866
0.1976
-0.0107
-0.4110
0.0314
-0.1915
0.1843
0.0134
0.0328
0.0842
0.0314
0.0862
refined
26.1558
93.3348
-1.6367
X-RAY DIFFRACTION
6.1497
2.4227
1.7067
3.5594
1.3046
3.6052
0.1997
0.0695
-0.0749
-0.0247
0.0645
-0.0255
-0.2450
-0.4012
-0.1416
0.1491
0.0166
0.0091
0.1192
-0.0000
0.0660
refined
20.5669
90.0943
-0.6359
X-RAY DIFFRACTION
7.3834
0.2541
0.5761
1.8848
-0.4603
0.1706
0.4078
-1.0783
0.1656
0.6401
-0.1867
0.0574
-0.3993
0.3454
-0.1835
0.3094
-0.0859
0.0658
0.1961
-0.0534
0.2509
refined
39.1772
98.8783
6.2632
X-RAY DIFFRACTION
8.6503
-0.5448
1.2692
4.0547
-0.4782
2.8413
-0.2219
-0.4510
-0.0851
-0.1581
0.1075
0.2562
-0.3591
-0.4319
0.1038
0.1544
0.0363
-0.0081
0.1201
-0.0158
0.0421
refined
21.1263
90.7292
3.7611
X-RAY DIFFRACTION
1.7374
0.5127
0.6357
3.4740
-0.1069
3.9305
-0.0311
0.2948
0.3948
-0.3560
-0.1051
0.0992
-0.8497
-0.3472
0.0370
0.2240
0.1186
-0.0159
0.1636
-0.0040
0.1280
refined
20.4634
91.1300
4.3456
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 3 through 30 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 31 through 101 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 102 through 123 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 124 through 140 )
X-RAY DIFFRACTION
5
chain 'B' and (resid 10 through 30 )
X-RAY DIFFRACTION
6
chain 'B' and (resid 31 through 45 )
X-RAY DIFFRACTION
7
chain 'B' and (resid 46 through 56 )
X-RAY DIFFRACTION
8
chain 'B' and (resid 57 through 75 )
X-RAY DIFFRACTION
9
chain 'B' and (resid 76 through 86 )
X-RAY DIFFRACTION
10
chain 'B' and (resid 87 through 101 )
X-RAY DIFFRACTION
11
chain 'B' and (resid 102 through 109 )
X-RAY DIFFRACTION
12
chain 'B' and (resid 110 through 123 )
X-RAY DIFFRACTION
13
chain 'B' and (resid 124 through 140 )
author_and_software_defined_assembly
PISA
2
dimeric
4110
-12
12420
A
MSE
47
SELENOMETHIONINE
A
MSE
50
MET
A
MSE
64
SELENOMETHIONINE
A
MSE
67
MET
B
MSE
47
SELENOMETHIONINE
B
MSE
50
MET
B
MSE
64
SELENOMETHIONINE
B
MSE
67
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
54
A
O
ARG
57
A
N
MSE
47
A
N
MSE
50
A
N
THR
46
A
N
THR
49
A
O
TYR
132
A
O
TYR
135
A
O
GLN
126
A
O
GLN
129
A
N
GLN
123
A
N
GLN
126
A
O
ALA
120
A
O
ALA
123
A
N
ALA
92
A
N
ALA
95
A
O
ILE
95
A
O
ILE
98
A
N
ILE
82
A
N
ILE
85
B
O
ARG
54
B
O
ARG
57
B
N
MSE
47
B
N
MSE
50
B
N
THR
46
B
N
THR
49
B
O
TYR
132
B
O
TYR
135
B
O
GLN
126
B
O
GLN
129
B
N
GLN
123
B
N
GLN
126
B
O
ALA
120
B
O
ALA
123
B
N
ALA
92
B
N
ALA
95
B
O
ILE
95
B
O
ILE
98
B
N
ILE
82
B
N
ILE
85
1
A
CIT
201
C
CIT
1
A
PO4
204
F
PO4
1
A
HOH
380
I
HOH
1
A
HOH
416
I
HOH
1
B
HOH
320
J
HOH
1
B
HOH
375
J
HOH
1
A
SER
-2
A
SER
1
1
Y
1
A
ASN
-1
A
ASN
2
1
Y
1
A
ALA
0
A
ALA
3
1
Y
1
A
MSE
1
A
MSE
4
1
Y
1
A
THR
2
A
THR
5
1
Y
1
B
SER
-2
B
SER
1
1
Y
1
B
ASN
-1
B
ASN
2
1
Y
1
B
ALA
0
B
ALA
3
1
Y
1
B
MSE
1
B
MSE
4
1
Y
1
B
THR
2
B
THR
5
1
Y
1
B
SER
3
B
SER
6
1
Y
1
B
THR
4
B
THR
7
1
Y
1
B
ASP
5
B
ASP
8
1
Y
1
B
SER
6
B
SER
9
1
Y
1
B
ILE
7
B
ILE
10
1
Y
1
B
THR
8
B
THR
11
1
Y
1
B
SER
9
B
SER
12
1
Y
1
A
HIS
32
B
38.82
50.86
24.2
0.195
0.168
0.169
0.169
1.700
27.683
1564
30859
30859
5.07
95.92
0.16
random
1
mixed
THROUGHOUT
0.0
0.0
SAD
19.79
0.90
1.11
MLHL
FLAT BULK SOLVENT MODEL
1.700
27.683
210
2252
66
0
1976
0.010
2194
1.325
2986
18.058
801
0.100
314
0.006
405
0.2589
0.2113
1.7550
110
1936
2046
71.00
0.2614
0.1920
1.8177
115
2523
2638
91.00
0.1986
0.1809
1.8905
141
2742
2883
98.00
0.1950
0.1693
1.9765
161
2692
2853
99.00
0.1805
0.1606
2.0807
139
2760
2899
99.00
0.1827
0.1585
2.2110
151
2744
2895
99.00
0.1914
0.1632
2.3816
135
2776
2911
100.00
0.2334
0.1734
2.6211
142
2762
2904
100.00
0.2187
0.1802
3.0000
160
2774
2934
100.00
0.2004
0.1676
3.7781
163
2781
2944
100.00
0.1560
0.1540
27.6862
147
2805
2952
99.00
14.70
1.7
50
4I4K
31922
31922
0.0
0.0
0.090
1
11.9
3.9
99.3
1.7
1.73
3.0
1594
0.498
1
2.8
98.2
data collection
SBC-Collect
data collection
HKL-3000
phasing
HKL-3000
phasing
SHELXS
phasing
MLPHARE
model building
ARP/wARP
refinement
PHENIX
(phenix.refine: 1.8.1_1161)
data reduction
HKL-3000
data scaling
HKL-3000
uncharacterized protein SgcJ
Streptomyces globisporus C-1027 9-membered enediyne conserved protein SgcE6
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
2
N
N
6
N
N
7
N
N
7
N
N
dimer is in the asymmetric unit
A
SER
9
A
SER
12
HELX_P
A
ALA
20
A
ALA
23
1
1
12
A
ALA
20
A
ALA
23
HELX_P
A
ASP
31
A
ASP
34
1
2
12
A
ASP
33
A
ASP
36
HELX_P
A
ASP
39
A
ASP
42
1
3
7
A
GLY
56
A
GLY
59
HELX_P
A
GLY
70
A
GLY
73
1
4
15
A
SER
109
A
SER
112
HELX_P
A
ASP
111
A
ASP
114
5
5
3
B
PRO
11
B
PRO
14
HELX_P
B
ASP
31
B
ASP
34
1
6
21
B
ASP
33
B
ASP
36
HELX_P
B
VAL
40
B
VAL
43
1
7
8
B
GLY
56
B
GLY
59
HELX_P
B
GLY
70
B
GLY
73
1
8
15
B
SER
109
B
SER
112
HELX_P
B
ASP
111
B
ASP
114
5
9
3
covale
1.329
A
THR
46
A
C
THR
49
1_555
A
MSE
47
A
N
MSE
50
1_555
covale
1.331
A
MSE
47
A
C
MSE
50
1_555
A
ILE
48
A
N
ILE
51
1_555
covale
1.336
A
HIS
63
A
C
HIS
66
1_555
A
MSE
64
A
N
MSE
67
1_555
covale
1.332
A
MSE
64
A
C
MSE
67
1_555
A
ALA
65
A
N
ALA
68
1_555
covale
1.325
B
THR
46
B
C
THR
49
1_555
B
MSE
47
B
N
MSE
50
1_555
covale
1.330
B
MSE
47
B
C
MSE
50
1_555
B
ILE
48
B
N
ILE
51
1_555
covale
1.335
B
HIS
63
B
C
HIS
66
1_555
B
MSE
64
B
N
MSE
67
1_555
covale
1.324
B
MSE
64
B
C
MSE
67
1_555
B
ALA
65
B
N
ALA
68
1_555
Structural Genomics, Unknown Function
Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, Enzyme Discovery for Natural Product Biosynthesis, NatPro, alpha-beta sandwich, Unknown Function
Q8GMG4_STRGL
UNP
1
1
Q8GMG4
MTSTDSTTSAPDAALAAVAALPARIVAAWADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGPYKGTRVIGS
PIDARLLGDGIALLITEGGILAPGETEASGDGAVRASWLAVEQDGQWRLAAYQNSPRGND
1
140
4I4K
1
140
Q8GMG4
A
1
4
143
1
140
4I4K
1
140
Q8GMG4
B
1
4
143
1
EXPRESSION TAG
SER
-2
4I4K
A
Q8GMG4
UNP
1
1
EXPRESSION TAG
ASN
-1
4I4K
A
Q8GMG4
UNP
2
1
EXPRESSION TAG
ALA
0
4I4K
A
Q8GMG4
UNP
3
1
THR
engineered mutation
ILE
7
4I4K
A
Q8GMG4
UNP
7
10
2
EXPRESSION TAG
SER
-2
4I4K
B
Q8GMG4
UNP
1
2
EXPRESSION TAG
ASN
-1
4I4K
B
Q8GMG4
UNP
2
2
EXPRESSION TAG
ALA
0
4I4K
B
Q8GMG4
UNP
3
2
THR
engineered mutation
ILE
7
4I4K
B
Q8GMG4
UNP
7
10
6
6
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
52
A
LEU
55
A
LYS
55
A
LYS
58
A
PHE
41
A
PHE
44
A
LEU
49
A
LEU
52
A
GLN
126
A
GLN
129
A
PRO
136
A
PRO
139
A
ALA
113
A
ALA
116
A
GLN
123
A
GLN
126
A
ILE
91
A
ILE
94
A
LEU
101
A
LEU
104
A
ARG
76
A
ARG
79
A
GLY
88
A
GLY
91
B
LEU
52
B
LEU
55
B
LYS
55
B
LYS
58
B
PHE
41
B
PHE
44
B
LEU
49
B
LEU
52
B
GLN
126
B
GLN
129
B
PRO
136
B
PRO
139
B
ALA
113
B
ALA
116
B
GLN
123
B
GLN
126
B
ILE
91
B
ILE
94
B
LEU
101
B
LEU
104
B
ARG
76
B
ARG
79
B
GLY
88
B
GLY
91
BINDING SITE FOR RESIDUE CIT A 201
Software
15
BINDING SITE FOR RESIDUE PG4 A 202
Software
12
BINDING SITE FOR RESIDUE GOL A 203
Software
2
BINDING SITE FOR RESIDUE PO4 A 204
Software
10
BINDING SITE FOR RESIDUE CIT B 201
Software
18
BINDING SITE FOR RESIDUE 1PE B 202
Software
13
A
ARG
54
A
ARG
57
15
1_555
A
ARG
54
A
ARG
57
15
2_655
A
THR
62
A
THR
65
15
2_655
A
THR
62
A
THR
65
15
1_555
A
HIS
63
A
HIS
66
15
1_555
A
HIS
63
A
HIS
66
15
2_655
A
ALA
66
A
ALA
69
15
1_555
A
HOH
305
I
HOH
15
2_655
A
HOH
305
I
HOH
15
1_555
A
HOH
336
I
HOH
15
2_655
A
HOH
336
I
HOH
15
1_555
A
HOH
349
I
HOH
15
2_655
A
HOH
349
I
HOH
15
1_555
A
HOH
410
I
HOH
15
1_555
A
HOH
410
I
HOH
15
2_655
A
TRP
29
A
TRP
32
12
1_555
A
TYR
72
A
TYR
75
12
1_555
A
VAL
77
A
VAL
80
12
1_555
A
ILE
78
A
ILE
81
12
1_555
A
THR
96
A
THR
99
12
1_555
A
VAL
114
A
VAL
117
12
1_555
A
TRP
118
A
TRP
121
12
1_555
A
TYR
132
A
TYR
135
12
1_555
A
ASN
134
A
ASN
137
12
1_555
A
HOH
341
I
HOH
12
1_555
A
HOH
342
I
HOH
12
1_555
A
HOH
347
I
HOH
12
1_555
A
ALA
84
A
ALA
87
2
1_555
A
HOH
373
I
HOH
2
1_555
A
ASP
89
A
ASP
92
10
1_555
A
ASP
89
A
ASP
92
10
2_555
A
GLU
122
A
GLU
125
10
2_555
A
GLU
122
A
GLU
125
10
1_555
A
HOH
309
I
HOH
10
1_555
A
HOH
309
I
HOH
10
2_555
A
HOH
329
I
HOH
10
1_555
A
HOH
329
I
HOH
10
2_555
A
HOH
393
I
HOH
10
1_555
A
HOH
393
I
HOH
10
2_555
B
ARG
54
B
ARG
57
18
2_656
B
ARG
54
B
ARG
57
18
1_555
B
THR
62
B
THR
65
18
2_656
B
THR
62
B
THR
65
18
1_555
B
HIS
63
B
HIS
66
18
2_656
B
HIS
63
B
HIS
66
18
1_555
B
ALA
66
B
ALA
69
18
2_656
B
ALA
66
B
ALA
69
18
1_555
B
HOH
304
J
HOH
18
1_555
B
HOH
304
J
HOH
18
2_656
B
HOH
330
J
HOH
18
1_555
B
HOH
330
J
HOH
18
2_656
B
HOH
344
J
HOH
18
2_656
B
HOH
344
J
HOH
18
1_555
B
HOH
345
J
HOH
18
2_656
B
HOH
345
J
HOH
18
1_555
B
HOH
346
J
HOH
18
1_555
B
HOH
346
J
HOH
18
2_656
B
TRP
29
B
TRP
32
13
1_555
B
TYR
72
B
TYR
75
13
1_555
B
VAL
77
B
VAL
80
13
1_555
B
ILE
78
B
ILE
81
13
1_555
B
GLY
79
B
GLY
82
13
1_555
B
THR
96
B
THR
99
13
1_555
B
VAL
114
B
VAL
117
13
1_555
B
TRP
118
B
TRP
121
13
1_555
B
TYR
132
B
TYR
135
13
1_555
B
ASN
134
B
ASN
137
13
1_555
B
HOH
328
J
HOH
13
1_555
B
HOH
352
J
HOH
13
1_555
B
HOH
358
J
HOH
13
1_555
5
C 1 2 1