0.015279 0.008821 0.000000 -0.000000 0.017643 0.000000 0.000000 -0.000000 0.013833 0.000000 0.000000 0.000000 Martin, R.N.A. McGeehan, J.E. Kneale, G.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.000 90.000 120.000 65.449 65.449 72.290 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H2 O4 -2 102.046 MALONATE ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N C N 237 N C N 238 N C N 239 N O N 240 N O N 241 N O N 242 N O N 243 N H N 244 N H N 245 N N N 246 S C N 247 N C N 248 N O N 249 N C Y 250 N C Y 251 N C Y 252 N C Y 253 N C Y 254 N C Y 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 R C N 287 N O N 288 N C N 289 N O N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N N N 300 S C N 301 N C N 302 N O N 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C N 310 N O N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing Y 243 N doub Y 244 N sing Y 245 N sing N 246 N sing Y 247 N doub N 248 N sing Y 249 N doub N 250 N sing Y 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing Y 295 N doub Y 296 N sing Y 297 N sing N 298 N sing Y 299 N doub N 300 N sing Y 301 N doub N 302 N sing Y 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing US Plos One 1932-6203 9 e98365 e98365 10.1371/journal.pone.0098365 24887147 Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I. 2014 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 65 900 905 10.1107/S0907444909020514 19690367 Structure of the restriction-modification controller protein C.Esp1396I. 2009 UK Nucleic Acids Res. NARHAD 0389 0305-1048 40 4158 4167 10.1093/nar/gkr1250 22210861 Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex. 2012 UK Nucleic Acids Res. NARHAD 0389 0305-1048 40 10532 10542 10.1093/nar/gks718 22941636 The structural basis of differential DNA sequence recognition by restriction-modification controller proteins. 2012 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 65 900 905 10.1107/S0907444909020514 19690367 Structure of the restriction-modification controller protein C.Esp1396I. 2009 10.2210/pdb4i6t/pdb pdb_00004i6t 100 1 PIXEL 2012-09-15 DECTRIS PILATUS 2M Si(111) double crystal monochromator SINGLE WAVELENGTH M x-ray 1 0.92 1.0 I04-1 Diamond 0.92 SYNCHROTRON DIAMOND BEAMLINE I04-1 9491.148 Regulatory protein T36A 2 man polymer 102.046 MALONATE ION 1 syn non-polymer 18.015 water 87 nat water no no GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRAYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n RFL1396 sample esp1396IC 211595 Enterobacter sp. 469008 Escherichia coli BL21(DE3)pLysS Plasmid pET28 1 2.35 47.76 VAPOR DIFFUSION, SITTING DROP 7 100 mM Sodium Sulphate, 2.4 M Sodium Malonate, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 struct_ncs_dom_lim struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations Refinement description 1 0 2013-11-13 1 1 2014-06-18 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id S52A Mutant Free Protein R46A Mutant Free Protein R46A Mutant Free Protein Native Free Protein R35A Mutant Free Protein DNA Bound Tetramer DNA Bound Dimer (OL) DNA Bound Dimer (OM) Native Free Protein (Triclinic) RCSB Y RCSB 2012-11-30 REL REL MLI MALONATE ION HOH water MLI 1 2 MLI MLI 101 A HOH 1 3 HOH HOH 201 A HOH 2 3 HOH HOH 202 A HOH 3 3 HOH HOH 203 A HOH 4 3 HOH HOH 204 A HOH 5 3 HOH HOH 205 A HOH 6 3 HOH HOH 206 A HOH 7 3 HOH HOH 207 A HOH 9 3 HOH HOH 208 A HOH 11 3 HOH HOH 209 A HOH 12 3 HOH HOH 210 A HOH 13 3 HOH HOH 211 A HOH 14 3 HOH HOH 212 A HOH 15 3 HOH HOH 213 A HOH 16 3 HOH HOH 214 A HOH 17 3 HOH HOH 215 A HOH 20 3 HOH HOH 216 A HOH 21 3 HOH HOH 217 A HOH 23 3 HOH HOH 218 A HOH 27 3 HOH HOH 219 A HOH 28 3 HOH HOH 220 A HOH 30 3 HOH HOH 221 A HOH 31 3 HOH HOH 222 A HOH 32 3 HOH HOH 223 A HOH 35 3 HOH HOH 224 A HOH 41 3 HOH HOH 225 A HOH 42 3 HOH HOH 226 A HOH 45 3 HOH HOH 227 A HOH 48 3 HOH HOH 228 A HOH 49 3 HOH HOH 229 A HOH 52 3 HOH HOH 230 A HOH 53 3 HOH HOH 231 A HOH 56 3 HOH HOH 232 A HOH 58 3 HOH HOH 233 A HOH 59 3 HOH HOH 234 A HOH 60 3 HOH HOH 235 A HOH 61 3 HOH HOH 236 A HOH 62 3 HOH HOH 237 A HOH 67 3 HOH HOH 238 A HOH 74 3 HOH HOH 239 A HOH 78 3 HOH HOH 240 A HOH 81 3 HOH HOH 241 A HOH 82 3 HOH HOH 242 A HOH 83 3 HOH HOH 243 A HOH 85 3 HOH HOH 244 A HOH 86 3 HOH HOH 245 A HOH 87 3 HOH HOH 246 A HOH 84 3 HOH HOH 101 B HOH 8 3 HOH HOH 102 B HOH 10 3 HOH HOH 103 B HOH 18 3 HOH HOH 104 B HOH 19 3 HOH HOH 105 B HOH 22 3 HOH HOH 106 B HOH 24 3 HOH HOH 107 B HOH 25 3 HOH HOH 108 B HOH 26 3 HOH HOH 109 B HOH 29 3 HOH HOH 110 B HOH 33 3 HOH HOH 111 B HOH 34 3 HOH HOH 112 B HOH 36 3 HOH HOH 113 B HOH 37 3 HOH HOH 114 B HOH 38 3 HOH HOH 115 B HOH 39 3 HOH HOH 116 B HOH 40 3 HOH HOH 117 B HOH 43 3 HOH HOH 118 B HOH 44 3 HOH HOH 119 B HOH 46 3 HOH HOH 120 B HOH 47 3 HOH HOH 121 B HOH 50 3 HOH HOH 122 B HOH 51 3 HOH HOH 123 B HOH 54 3 HOH HOH 124 B HOH 55 3 HOH HOH 125 B HOH 57 3 HOH HOH 126 B HOH 63 3 HOH HOH 127 B HOH 64 3 HOH HOH 128 B HOH 65 3 HOH HOH 129 B HOH 66 3 HOH HOH 130 B HOH 68 3 HOH HOH 131 B HOH 69 3 HOH HOH 132 B HOH 70 3 HOH HOH 133 B HOH 72 3 HOH HOH 134 B HOH 73 3 HOH HOH 135 B HOH 75 3 HOH HOH 136 B HOH 76 3 HOH HOH 137 B HOH 77 3 HOH HOH 138 B HOH 79 3 HOH HOH 139 B HOH 80 3 HOH HOH 140 B HOH 88 3 HOH HOH 141 B 2.210 2.210 44.600 44.600 Phaser MODE: MR_AUTO n 1 -2 A n 2 -1 A n 3 0 A n 4 1 A n 5 2 A SER 3 n 6 SER 3 A PHE 4 n 7 PHE 4 A LEU 5 n 8 LEU 5 A LEU 6 n 9 LEU 6 A SER 7 n 10 SER 7 A LYS 8 n 11 LYS 8 A VAL 9 n 12 VAL 9 A SER 10 n 13 SER 10 A PHE 11 n 14 PHE 11 A VAL 12 n 15 VAL 12 A ILE 13 n 16 ILE 13 A LYS 14 n 17 LYS 14 A LYS 15 n 18 LYS 15 A ILE 16 n 19 ILE 16 A ARG 17 n 20 ARG 17 A LEU 18 n 21 LEU 18 A GLU 19 n 22 GLU 19 A LYS 20 n 23 LYS 20 A GLY 21 n 24 GLY 21 A MET 22 n 25 MET 22 A THR 23 n 26 THR 23 A GLN 24 n 27 GLN 24 A GLU 25 n 28 GLU 25 A ASP 26 n 29 ASP 26 A LEU 27 n 30 LEU 27 A ALA 28 n 31 ALA 28 A TYR 29 n 32 TYR 29 A LYS 30 n 33 LYS 30 A SER 31 n 34 SER 31 A ASN 32 n 35 ASN 32 A LEU 33 n 36 LEU 33 A ASP 34 n 37 ASP 34 A ARG 35 n 38 ARG 35 A ALA 36 n 39 ALA 36 A TYR 37 n 40 TYR 37 A ILE 38 n 41 ILE 38 A SER 39 n 42 SER 39 A GLY 40 n 43 GLY 40 A ILE 41 n 44 ILE 41 A GLU 42 n 45 GLU 42 A ARG 43 n 46 ARG 43 A ASN 44 n 47 ASN 44 A SER 45 n 48 SER 45 A ARG 46 n 49 ARG 46 A ASN 47 n 50 ASN 47 A LEU 48 n 51 LEU 48 A THR 49 n 52 THR 49 A ILE 50 n 53 ILE 50 A LYS 51 n 54 LYS 51 A SER 52 n 55 SER 52 A LEU 53 n 56 LEU 53 A GLU 54 n 57 GLU 54 A LEU 55 n 58 LEU 55 A ILE 56 n 59 ILE 56 A MET 57 n 60 MET 57 A LYS 58 n 61 LYS 58 A GLY 59 n 62 GLY 59 A LEU 60 n 63 LEU 60 A GLU 61 n 64 GLU 61 A VAL 62 n 65 VAL 62 A SER 63 n 66 SER 63 A ASP 64 n 67 ASP 64 A VAL 65 n 68 VAL 65 A VAL 66 n 69 VAL 66 A PHE 67 n 70 PHE 67 A PHE 68 n 71 PHE 68 A GLU 69 n 72 GLU 69 A MET 70 n 73 MET 70 A LEU 71 n 74 LEU 71 A ILE 72 n 75 ILE 72 A LYS 73 n 76 LYS 73 A GLU 74 n 77 GLU 74 A ILE 75 n 78 ILE 75 A LEU 76 n 79 LEU 76 A LYS 77 n 80 LYS 77 A n 81 78 A n 82 79 A n 1 -2 B n 2 -1 B n 3 0 B n 4 1 B n 5 2 B SER 3 n 6 SER 3 B PHE 4 n 7 PHE 4 B LEU 5 n 8 LEU 5 B LEU 6 n 9 LEU 6 B SER 7 n 10 SER 7 B LYS 8 n 11 LYS 8 B VAL 9 n 12 VAL 9 B SER 10 n 13 SER 10 B PHE 11 n 14 PHE 11 B VAL 12 n 15 VAL 12 B ILE 13 n 16 ILE 13 B LYS 14 n 17 LYS 14 B LYS 15 n 18 LYS 15 B ILE 16 n 19 ILE 16 B ARG 17 n 20 ARG 17 B LEU 18 n 21 LEU 18 B GLU 19 n 22 GLU 19 B LYS 20 n 23 LYS 20 B GLY 21 n 24 GLY 21 B MET 22 n 25 MET 22 B THR 23 n 26 THR 23 B GLN 24 n 27 GLN 24 B GLU 25 n 28 GLU 25 B ASP 26 n 29 ASP 26 B LEU 27 n 30 LEU 27 B ALA 28 n 31 ALA 28 B TYR 29 n 32 TYR 29 B LYS 30 n 33 LYS 30 B SER 31 n 34 SER 31 B ASN 32 n 35 ASN 32 B LEU 33 n 36 LEU 33 B ASP 34 n 37 ASP 34 B ARG 35 n 38 ARG 35 B ALA 36 n 39 ALA 36 B TYR 37 n 40 TYR 37 B ILE 38 n 41 ILE 38 B SER 39 n 42 SER 39 B GLY 40 n 43 GLY 40 B ILE 41 n 44 ILE 41 B GLU 42 n 45 GLU 42 B ARG 43 n 46 ARG 43 B ASN 44 n 47 ASN 44 B SER 45 n 48 SER 45 B ARG 46 n 49 ARG 46 B ASN 47 n 50 ASN 47 B LEU 48 n 51 LEU 48 B THR 49 n 52 THR 49 B ILE 50 n 53 ILE 50 B LYS 51 n 54 LYS 51 B SER 52 n 55 SER 52 B LEU 53 n 56 LEU 53 B GLU 54 n 57 GLU 54 B LEU 55 n 58 LEU 55 B ILE 56 n 59 ILE 56 B MET 57 n 60 MET 57 B LYS 58 n 61 LYS 58 B GLY 59 n 62 GLY 59 B LEU 60 n 63 LEU 60 B GLU 61 n 64 GLU 61 B VAL 62 n 65 VAL 62 B SER 63 n 66 SER 63 B ASP 64 n 67 ASP 64 B VAL 65 n 68 VAL 65 B VAL 66 n 69 VAL 66 B PHE 67 n 70 PHE 67 B PHE 68 n 71 PHE 68 B GLU 69 n 72 GLU 69 B MET 70 n 73 MET 70 B LEU 71 n 74 LEU 71 B ILE 72 n 75 ILE 72 B LYS 73 n 76 LYS 73 B GLU 74 n 77 GLU 74 B ILE 75 n 78 ILE 75 B LEU 76 n 79 LEU 76 B LYS 77 n 80 LYS 77 B n 81 78 B n 82 79 B author_and_software_defined_assembly PISA 2 dimeric 2120 -17 7760 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B CG LYS 77 B CG LYS 80 1 Y 1 B CD LYS 77 B CD LYS 80 1 Y 1 B CE LYS 77 B CE LYS 80 1 Y 1 B NZ LYS 77 B NZ LYS 80 1 Y 1 A GLY -2 A GLY 1 1 Y 1 A SER -1 A SER 2 1 Y 1 A HIS 0 A HIS 3 1 Y 1 A MET 1 A MET 4 1 Y 1 A GLU 2 A GLU 5 1 Y 1 A HIS 78 A HIS 81 1 Y 1 A ASP 79 A ASP 82 1 Y 1 B GLY -2 B GLY 1 1 Y 1 B SER -1 B SER 2 1 Y 1 B HIS 0 B HIS 3 1 Y 1 B MET 1 B MET 4 1 Y 1 B GLU 2 B GLU 5 1 Y 1 B HIS 78 B HIS 81 1 Y 1 B ASP 79 B ASP 82 1 Y 1 B B NE O ARG HOH 43 132 2.11 1 A ASN 44 73.55 33.11 80.320 28.8705 9.080 0.0100 0.0100 -0.0000 0.0100 -0.0000 -0.0400 0.9530 0.9110 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY 0.2452 0.1844 0.1874 2.0000 29.8100 569 11894 4.8000 99.4800 0.2521 0.1920 1.000 0.290 0.8349 5.0370 0.1340 0.1753 0.1704 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1750 0.1700 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD MASK 2.0000 29.8100 87 1306 7 0 1212 0.019 0.019 1244 0.006 0.020 1297 1.875 2.010 1662 1.321 3.000 2994 5.845 5.000 154 36.367 24.400 50 18.018 15.000 275 15.756 15.000 8 0.101 0.200 199 0.009 0.020 1331 0.005 0.020 257 1 A 1 4415 X-RAY DIFFRACTION interatomic distance 0.200 0.050 2 B 1 4415 X-RAY DIFFRACTION interatomic distance 0.200 0.050 0.4750 0.3240 2.0520 37 841 878 20 100.0000 1.970 56.681 4I6T 130244 12508 0.437 1 4.200 10.400 99.600 0.026 1.970 2.020 1.100 9506 886 1 10.700 100.000 0.026 9.030 44.600 9.000 1611 142 1 11.300 99.500 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package data scaling Phil Evans 03/07/12 http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html Aimless program 0.1.26 phasing Randy J. Read cimr-phaser@lists.cam.ac.uk Tue Jul 10 12:42:19 2012 (svn ) http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program 2.5.1 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection GDA Crystal Structure of a T36A mutant of the Restriction-Modification Controller Protein C.Esp1396I 1 N N 1 N N 2 N N 3 N N 3 N N biological unit is the same as asym. A SER 3 A SER 6 HELX_P A LYS 20 A LYS 23 1 1 18 A THR 23 A THR 26 HELX_P A ASN 32 A ASN 35 1 2 10 A ASP 34 A ASP 37 HELX_P A ARG 43 A ARG 46 1 3 10 A THR 49 A THR 52 HELX_P A LEU 60 A LEU 63 1 4 12 A SER 63 A SER 66 HELX_P A LEU 76 A LEU 79 1 5 14 B PHE 4 B PHE 7 HELX_P B LYS 20 B LYS 23 1 6 17 B THR 23 B THR 26 HELX_P B ASN 32 B ASN 35 1 7 10 B ASP 34 B ASP 37 HELX_P B ASN 44 B ASN 47 1 8 11 B SER 45 B SER 48 HELX_P B LEU 48 B LEU 51 5 9 4 B THR 49 B THR 52 HELX_P B LEU 60 B LEU 63 1 10 12 B SER 63 B SER 66 HELX_P B LYS 77 B LYS 80 1 11 15 TRANSCRIPTION Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, TRANSCRIPTION A B A SER 3 A SER 6 A LYS 77 A LYS 80 0 B SER 3 B SER 6 B LYS 77 B LYS 80 0 Q8GGH0_9ENTR UNP 1 1 Q8GGH0 MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD 1 79 4I6T 1 79 Q8GGH0 A 1 4 82 1 79 4I6T 1 79 Q8GGH0 B 1 4 82 1 expression tag GLY -2 4I6T A Q8GGH0 UNP 1 1 expression tag SER -1 4I6T A Q8GGH0 UNP 2 1 expression tag HIS 0 4I6T A Q8GGH0 UNP 3 1 THR engineered mutation ALA 36 4I6T A Q8GGH0 UNP 36 39 2 expression tag GLY -2 4I6T B Q8GGH0 UNP 1 2 expression tag SER -1 4I6T B Q8GGH0 UNP 2 2 expression tag HIS 0 4I6T B Q8GGH0 UNP 3 2 THR engineered mutation ALA 36 4I6T B Q8GGH0 UNP 36 39 BINDING SITE FOR RESIDUE MLI A 101 A MLI 101 Software 4 A SER 3 A SER 6 4 1_555 A TYR 29 A TYR 32 4 2_564 A ASN 44 A ASN 47 4 1_555 A SER 45 A SER 48 4 1_555 170 P 65