0.005347
0.000000
0.001493
-0.000000
0.021761
0.000000
0.000000
-0.000000
0.012583
0.000000
0.000000
0.000000
Koclega, K.D.
Chruszcz, M.
Cooper, D.R.
Petkowski, J.J.
Tkaczuk, K.L.
Joachimiak, A.
0000-0001-7075-7090
Minor, W.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
105.600
90.000
187.008
45.954
82.510
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
Y
271
N
C
Y
272
N
N
Y
273
N
C
Y
274
N
C
Y
275
N
N
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
S
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
C
N
340
N
C
N
341
N
C
N
342
N
N
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
N
O
N
364
N
C
N
365
N
C
N
366
N
SE
N
367
N
C
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
O
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
R
C
N
438
N
O
N
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
N
N
451
S
C
N
452
N
C
N
453
N
O
N
454
N
C
Y
455
N
C
Y
456
N
C
Y
457
N
C
Y
458
N
N
Y
459
N
C
Y
460
N
C
Y
461
N
C
Y
462
N
C
Y
463
N
C
N
464
N
O
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
N
N
478
S
C
N
479
N
C
N
480
N
O
N
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
C
Y
485
N
C
Y
486
N
C
Y
487
N
C
N
488
N
O
N
489
N
O
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
N
N
502
S
C
N
503
N
C
N
504
N
O
N
505
N
C
N
506
N
C
N
507
N
C
N
508
N
O
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
Y
276
N
sing
Y
277
N
doub
Y
278
N
doub
N
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
doub
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
Y
453
N
doub
Y
454
N
sing
Y
455
N
sing
N
456
N
sing
Y
457
N
doub
Y
458
N
sing
Y
459
N
sing
N
460
N
sing
Y
461
N
sing
Y
462
N
doub
N
463
N
sing
Y
464
N
doub
N
465
N
sing
Y
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
Y
481
N
doub
Y
482
N
sing
Y
483
N
sing
N
484
N
sing
Y
485
N
doub
N
486
N
sing
Y
487
N
doub
N
488
N
sing
Y
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
doub
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
To be Published
0353
Crystal structure of the transcriptional regulator TM1030 with 24bp DNA oligonucleotide
0000-0001-7075-7090
10.2210/pdb4i6z/pdb
pdb_00004i6z
100
1
CCD
2007-11-02
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.97935
1.0
19-ID
APS
0.97935
SYNCHROTRON
APS BEAMLINE 19-ID
24409.078
Transcriptional regulator, TetR family
2
man
polymer
7369.766
DNA OLIGONUCLEOTIDE
2
syn
polymer
18.015
water
6
nat
water
no
yes
GH(MSE)LSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAY(MSE)SVTEKLQKEFENFL
(MSE)KNRNRDIFDF(MSE)ERWIEKKLEYSASHPEEADFLITLVSVDEGLRKRILLDLEKSQRVFFDFVREKLKDLDLA
EDVTEEIALKFL(MSE)WFFSGFEEVYLRTYQGKPELLKRD(MSE)NTLVEEVKV(MSE)LRILKKG(MSE)TK
GHMLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFENFLMKNRNRDI
FDFMERWIEKKLEYSASHPEEADFLITLVSVDEGLRKRILLDLEKSQRVFFDFVREKLKDLDLAEDVTEEIALKFLMWFF
SGFEEVYLRTYQGKPELLKRDMNTLVEEVKVMLRILKKGMTK
A,B
MCSG-APC106687
polypeptide(L)
no
no
(DG)(DA)(DC)(DT)(DG)(DA)(DC)(DT)(DG)(DA)(DC)(DA)(DT)(DG)(DT)(DC)(DA)(DG)(DT)(DC)
(DA)(DG)(DT)(DC)
GACTGACTGACATGTCAGTCAGTC
C,D
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099
sample
TM1030, TM_1030
243274
Thermotoga maritima
469008
Escherichia coli
BL21-GOLD (DE3)
plasmid
pET15b
1
2.69
54.21
VAPOR DIFFUSION
8.0
0.1M Tris, 20% PEG 4000, pH 8.0, VAPOR DIFFUSION, temperature 310K
310
-6.500
1
19
C
1
D
24
-1.475
C_DG1:DC24_D
1
-2.988
-0.589
0.023
0.343
-3.723
1
20
C
2
D
23
-1.146
C_DA2:DT23_D
2
-2.042
0.392
0.272
-0.097
-9.516
1
19
C
3
D
22
3.601
C_DC3:DG22_D
3
-1.462
-0.482
0.591
0.119
-0.690
1
20
C
4
D
21
-8.440
C_DT4:DA21_D
4
-4.355
-0.335
-0.287
-0.403
11.318
1
19
C
5
D
20
-9.720
C_DG5:DC20_D
5
-1.162
0.270
-0.118
-0.373
2.116
1
20
C
6
D
19
-11.788
C_DA6:DT19_D
6
-8.592
0.520
0.395
0.021
-4.016
1
19
C
7
D
18
-7.256
C_DC7:DG18_D
7
0.208
0.596
0.559
-0.075
2.426
1
20
C
8
D
17
-3.095
C_DT8:DA17_D
8
-0.647
0.534
0.008
-0.045
9.839
1
19
C
9
D
16
0.358
C_DG9:DC16_D
9
8.353
-0.394
-0.272
-0.398
10.000
1
20
C
10
D
15
-8.301
C_DA10:DT15_D
10
-11.903
-0.165
-0.309
-0.342
8.954
1
19
C
11
D
14
-6.732
C_DC11:DG14_D
11
-13.890
-0.190
-0.467
-0.009
-3.758
1
20
C
12
D
13
-1.513
C_DA12:DT13_D
12
1.240
-0.078
-0.035
-0.013
3.284
40.580
C
C
1
2
-2.989
D
D
24
23
3.228
-2.072
-1.055
-0.766
CC_DG1DA2:DT23DC24_DD
1
-0.930
1.342
40.519
-0.874
1.418
3.292
30.934
C
C
2
3
-3.799
D
D
23
22
3.425
-2.018
1.131
-1.126
CC_DA2DC3:DG22DT23_DD
2
-4.559
8.583
30.539
-1.707
-3.033
2.539
26.944
C
C
3
4
5.914
D
D
22
21
3.113
2.724
-1.529
-1.014
CC_DC3DT4:DA21DG22_DD
3
6.572
-14.267
26.004
-2.789
4.762
3.427
30.970
C
C
4
5
14.079
D
D
21
20
3.236
7.440
0.454
1.090
CC_DT4DG5:DC20DA21_DD
4
2.449
-4.634
29.987
0.555
-0.361
3.600
42.276
C
C
5
6
-7.047
D
D
20
19
3.658
-5.059
-0.541
0.640
CC_DG5DA6:DT19DC20_DD
5
-5.393
7.513
41.654
1.466
0.132
3.452
34.967
C
C
6
7
1.231
D
D
19
18
3.534
0.739
0.634
-1.178
CC_DA6DC7:DG18DT19_DD
6
-2.676
4.459
34.860
-2.079
-1.486
3.073
29.070
C
C
7
8
-5.774
D
D
18
17
3.132
-2.880
-0.341
-0.602
CC_DC7DT8:DA17DG18_DD
7
4.989
-10.003
28.506
-0.593
1.728
3.284
33.194
C
C
8
9
-5.571
D
D
17
16
3.340
-3.157
0.812
1.472
CC_DT8DG9:DC16DA17_DD
8
6.823
-12.042
32.355
3.119
-0.248
3.412
33.057
C
C
9
10
20.872
D
D
16
15
3.445
11.623
-0.366
0.462
CC_DG9DA10:DT15DC16_DD
9
-2.636
4.734
30.890
-1.323
0.159
3.531
35.375
C
C
10
11
-7.100
D
D
15
14
3.427
-4.304
0.786
-1.088
CC_DA10DC11:DG14DT15_DD
10
-0.007
0.011
35.120
-1.114
-1.294
3.592
36.240
C
C
11
12
9.796
D
D
14
13
3.749
6.064
-0.792
-0.884
CC_DC11DA12:DT13DG14_DD
11
-1.898
3.066
35.697
-2.384
0.973
Midwest Center for Structural Genomics
MCSG
PSI:Biology
software
audit_author
citation_author
database_2
struct_conn
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
struct_ncs_dom_lim
chem_comp_atom
chem_comp_bond
repository
Initial release
Derived calculations
Source and taxonomy
Refinement description
Database references
Derived calculations
Structure summary
Data collection
Refinement description
Data collection
1
0
2013-01-02
1
1
2015-05-20
1
2
2015-05-27
1
3
2017-11-15
1
4
2022-04-13
1
5
2023-09-20
1
6
2023-12-06
_audit_author.identifier_ORCID
_citation_author.identifier_ORCID
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.beg_label_asym_id
_struct_ncs_dom_lim.beg_label_comp_id
_struct_ncs_dom_lim.beg_label_seq_id
_struct_ncs_dom_lim.end_auth_comp_id
_struct_ncs_dom_lim.end_label_asym_id
_struct_ncs_dom_lim.end_label_comp_id
_struct_ncs_dom_lim.end_label_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
Y
RCSB
Y
RCSB
2012-11-30
REL
REL
HOH
water
Synthesized DNA
32630
synthetic construct
sample
2ID6
PDB ENTRY 2ID6
PDB
experimental model
HOH
1
3
HOH
HOH
301
A
HOH
3
3
HOH
HOH
302
A
HOH
2
3
HOH
HOH
301
B
HOH
4
3
HOH
HOH
302
B
HOH
5
3
HOH
HOH
303
B
HOH
6
3
HOH
HOH
304
B
n
1
-1
A
n
2
0
A
MSE
1
n
3
MSE
1
A
LEU
2
n
4
LEU
2
A
SER
3
n
5
SER
3
A
LYS
4
n
6
LYS
4
A
ARG
5
n
7
ARG
5
A
ASP
6
n
8
ASP
6
A
ALA
7
n
9
ALA
7
A
ILE
8
n
10
ILE
8
A
LEU
9
n
11
LEU
9
A
LYS
10
n
12
LYS
10
A
ALA
11
n
13
ALA
11
A
ALA
12
n
14
ALA
12
A
VAL
13
n
15
VAL
13
A
GLU
14
n
16
GLU
14
A
VAL
15
n
17
VAL
15
A
PHE
16
n
18
PHE
16
A
GLY
17
n
19
GLY
17
A
LYS
18
n
20
LYS
18
A
LYS
19
n
21
LYS
19
A
GLY
20
n
22
GLY
20
A
TYR
21
n
23
TYR
21
A
ASP
22
n
24
ASP
22
A
ARG
23
n
25
ARG
23
A
ALA
24
n
26
ALA
24
A
THR
25
n
27
THR
25
A
THR
26
n
28
THR
26
A
ASP
27
n
29
ASP
27
A
GLU
28
n
30
GLU
28
A
ILE
29
n
31
ILE
29
A
ALA
30
n
32
ALA
30
A
GLU
31
n
33
GLU
31
A
LYS
32
n
34
LYS
32
A
ALA
33
n
35
ALA
33
A
GLY
34
n
36
GLY
34
A
VAL
35
n
37
VAL
35
A
ALA
36
n
38
ALA
36
A
LYS
37
n
39
LYS
37
A
GLY
38
n
40
GLY
38
A
LEU
39
n
41
LEU
39
A
ILE
40
n
42
ILE
40
A
PHE
41
n
43
PHE
41
A
HIS
42
n
44
HIS
42
A
TYR
43
n
45
TYR
43
A
PHE
44
n
46
PHE
44
A
LYS
45
n
47
LYS
45
A
ASN
46
n
48
ASN
46
A
LYS
47
n
49
LYS
47
A
GLU
48
n
50
GLU
48
A
GLU
49
n
51
GLU
49
A
LEU
50
n
52
LEU
50
A
TYR
51
n
53
TYR
51
A
TYR
52
n
54
TYR
52
A
GLN
53
n
55
GLN
53
A
ALA
54
n
56
ALA
54
A
TYR
55
n
57
TYR
55
A
MSE
56
n
58
MSE
56
A
SER
57
n
59
SER
57
A
VAL
58
n
60
VAL
58
A
THR
59
n
61
THR
59
A
GLU
60
n
62
GLU
60
A
LYS
61
n
63
LYS
61
A
LEU
62
n
64
LEU
62
A
GLN
63
n
65
GLN
63
A
LYS
64
n
66
LYS
64
A
GLU
65
n
67
GLU
65
A
PHE
66
n
68
PHE
66
A
GLU
67
n
69
GLU
67
A
ASN
68
n
70
ASN
68
A
PHE
69
n
71
PHE
69
A
LEU
70
n
72
LEU
70
A
MSE
71
n
73
MSE
71
A
LYS
72
n
74
LYS
72
A
ASN
73
n
75
ASN
73
A
ARG
74
n
76
ARG
74
A
ASN
75
n
77
ASN
75
A
ARG
76
n
78
ARG
76
A
ASP
77
n
79
ASP
77
A
ILE
78
n
80
ILE
78
A
PHE
79
n
81
PHE
79
A
ASP
80
n
82
ASP
80
A
PHE
81
n
83
PHE
81
A
MSE
82
n
84
MSE
82
A
GLU
83
n
85
GLU
83
A
ARG
84
n
86
ARG
84
A
TRP
85
n
87
TRP
85
A
ILE
86
n
88
ILE
86
A
GLU
87
n
89
GLU
87
A
LYS
88
n
90
LYS
88
A
LYS
89
n
91
LYS
89
A
LEU
90
n
92
LEU
90
A
GLU
91
n
93
GLU
91
A
TYR
92
n
94
TYR
92
A
SER
93
n
95
SER
93
A
ALA
94
n
96
ALA
94
A
SER
95
n
97
SER
95
A
HIS
96
n
98
HIS
96
A
PRO
97
n
99
PRO
97
A
GLU
98
n
100
GLU
98
A
GLU
99
n
101
GLU
99
A
ALA
100
n
102
ALA
100
A
ASP
101
n
103
ASP
101
A
PHE
102
n
104
PHE
102
A
LEU
103
n
105
LEU
103
A
ILE
104
n
106
ILE
104
A
THR
105
n
107
THR
105
A
LEU
106
n
108
LEU
106
A
VAL
107
n
109
VAL
107
A
SER
108
n
110
SER
108
A
VAL
109
n
111
VAL
109
A
ASP
110
n
112
ASP
110
A
GLU
111
n
113
GLU
111
A
GLY
112
n
114
GLY
112
A
LEU
113
n
115
LEU
113
A
ARG
114
n
116
ARG
114
A
LYS
115
n
117
LYS
115
A
ARG
116
n
118
ARG
116
A
ILE
117
n
119
ILE
117
A
LEU
118
n
120
LEU
118
A
LEU
119
n
121
LEU
119
A
ASP
120
n
122
ASP
120
A
LEU
121
n
123
LEU
121
A
GLU
122
n
124
GLU
122
A
LYS
123
n
125
LYS
123
A
SER
124
n
126
SER
124
A
GLN
125
n
127
GLN
125
A
ARG
126
n
128
ARG
126
A
VAL
127
n
129
VAL
127
A
PHE
128
n
130
PHE
128
A
PHE
129
n
131
PHE
129
A
ASP
130
n
132
ASP
130
A
PHE
131
n
133
PHE
131
A
VAL
132
n
134
VAL
132
A
ARG
133
n
135
ARG
133
A
GLU
134
n
136
GLU
134
A
LYS
135
n
137
LYS
135
A
LEU
136
n
138
LEU
136
A
LYS
137
n
139
LYS
137
A
ASP
138
n
140
ASP
138
A
LEU
139
n
141
LEU
139
A
ASP
140
n
142
ASP
140
A
LEU
141
n
143
LEU
141
A
ALA
142
n
144
ALA
142
A
GLU
143
n
145
GLU
143
A
ASP
144
n
146
ASP
144
A
VAL
145
n
147
VAL
145
A
THR
146
n
148
THR
146
A
GLU
147
n
149
GLU
147
A
GLU
148
n
150
GLU
148
A
ILE
149
n
151
ILE
149
A
ALA
150
n
152
ALA
150
A
LEU
151
n
153
LEU
151
A
LYS
152
n
154
LYS
152
A
PHE
153
n
155
PHE
153
A
LEU
154
n
156
LEU
154
A
MSE
155
n
157
MSE
155
A
TRP
156
n
158
TRP
156
A
PHE
157
n
159
PHE
157
A
PHE
158
n
160
PHE
158
A
SER
159
n
161
SER
159
A
GLY
160
n
162
GLY
160
A
PHE
161
n
163
PHE
161
A
GLU
162
n
164
GLU
162
A
GLU
163
n
165
GLU
163
A
VAL
164
n
166
VAL
164
A
TYR
165
n
167
TYR
165
A
LEU
166
n
168
LEU
166
A
ARG
167
n
169
ARG
167
A
THR
168
n
170
THR
168
A
TYR
169
n
171
TYR
169
A
GLN
170
n
172
GLN
170
A
GLY
171
n
173
GLY
171
A
LYS
172
n
174
LYS
172
A
PRO
173
n
175
PRO
173
A
GLU
174
n
176
GLU
174
A
LEU
175
n
177
LEU
175
A
LEU
176
n
178
LEU
176
A
LYS
177
n
179
LYS
177
A
ARG
178
n
180
ARG
178
A
ASP
179
n
181
ASP
179
A
MSE
180
n
182
MSE
180
A
ASN
181
n
183
ASN
181
A
THR
182
n
184
THR
182
A
LEU
183
n
185
LEU
183
A
VAL
184
n
186
VAL
184
A
GLU
185
n
187
GLU
185
A
GLU
186
n
188
GLU
186
A
VAL
187
n
189
VAL
187
A
LYS
188
n
190
LYS
188
A
VAL
189
n
191
VAL
189
A
MSE
190
n
192
MSE
190
A
LEU
191
n
193
LEU
191
A
ARG
192
n
194
ARG
192
A
ILE
193
n
195
ILE
193
A
LEU
194
n
196
LEU
194
A
LYS
195
n
197
LYS
195
A
LYS
196
n
198
LYS
196
A
GLY
197
n
199
GLY
197
A
MSE
198
n
200
MSE
198
A
THR
199
n
201
THR
199
A
LYS
200
n
202
LYS
200
A
n
1
-1
B
n
2
0
B
MSE
1
n
3
MSE
1
B
LEU
2
n
4
LEU
2
B
SER
3
n
5
SER
3
B
LYS
4
n
6
LYS
4
B
ARG
5
n
7
ARG
5
B
ASP
6
n
8
ASP
6
B
ALA
7
n
9
ALA
7
B
ILE
8
n
10
ILE
8
B
LEU
9
n
11
LEU
9
B
LYS
10
n
12
LYS
10
B
ALA
11
n
13
ALA
11
B
ALA
12
n
14
ALA
12
B
VAL
13
n
15
VAL
13
B
GLU
14
n
16
GLU
14
B
VAL
15
n
17
VAL
15
B
PHE
16
n
18
PHE
16
B
GLY
17
n
19
GLY
17
B
LYS
18
n
20
LYS
18
B
LYS
19
n
21
LYS
19
B
GLY
20
n
22
GLY
20
B
TYR
21
n
23
TYR
21
B
ASP
22
n
24
ASP
22
B
ARG
23
n
25
ARG
23
B
ALA
24
n
26
ALA
24
B
THR
25
n
27
THR
25
B
THR
26
n
28
THR
26
B
ASP
27
n
29
ASP
27
B
GLU
28
n
30
GLU
28
B
ILE
29
n
31
ILE
29
B
ALA
30
n
32
ALA
30
B
GLU
31
n
33
GLU
31
B
LYS
32
n
34
LYS
32
B
ALA
33
n
35
ALA
33
B
GLY
34
n
36
GLY
34
B
VAL
35
n
37
VAL
35
B
ALA
36
n
38
ALA
36
B
LYS
37
n
39
LYS
37
B
GLY
38
n
40
GLY
38
B
LEU
39
n
41
LEU
39
B
ILE
40
n
42
ILE
40
B
PHE
41
n
43
PHE
41
B
HIS
42
n
44
HIS
42
B
TYR
43
n
45
TYR
43
B
PHE
44
n
46
PHE
44
B
LYS
45
n
47
LYS
45
B
ASN
46
n
48
ASN
46
B
LYS
47
n
49
LYS
47
B
GLU
48
n
50
GLU
48
B
GLU
49
n
51
GLU
49
B
LEU
50
n
52
LEU
50
B
TYR
51
n
53
TYR
51
B
TYR
52
n
54
TYR
52
B
GLN
53
n
55
GLN
53
B
ALA
54
n
56
ALA
54
B
TYR
55
n
57
TYR
55
B
MSE
56
n
58
MSE
56
B
SER
57
n
59
SER
57
B
VAL
58
n
60
VAL
58
B
THR
59
n
61
THR
59
B
GLU
60
n
62
GLU
60
B
LYS
61
n
63
LYS
61
B
LEU
62
n
64
LEU
62
B
GLN
63
n
65
GLN
63
B
LYS
64
n
66
LYS
64
B
GLU
65
n
67
GLU
65
B
PHE
66
n
68
PHE
66
B
GLU
67
n
69
GLU
67
B
ASN
68
n
70
ASN
68
B
PHE
69
n
71
PHE
69
B
LEU
70
n
72
LEU
70
B
MSE
71
n
73
MSE
71
B
LYS
72
n
74
LYS
72
B
ASN
73
n
75
ASN
73
B
ARG
74
n
76
ARG
74
B
ASN
75
n
77
ASN
75
B
ARG
76
n
78
ARG
76
B
ASP
77
n
79
ASP
77
B
ILE
78
n
80
ILE
78
B
PHE
79
n
81
PHE
79
B
ASP
80
n
82
ASP
80
B
PHE
81
n
83
PHE
81
B
MSE
82
n
84
MSE
82
B
GLU
83
n
85
GLU
83
B
ARG
84
n
86
ARG
84
B
TRP
85
n
87
TRP
85
B
ILE
86
n
88
ILE
86
B
GLU
87
n
89
GLU
87
B
LYS
88
n
90
LYS
88
B
LYS
89
n
91
LYS
89
B
LEU
90
n
92
LEU
90
B
GLU
91
n
93
GLU
91
B
TYR
92
n
94
TYR
92
B
SER
93
n
95
SER
93
B
ALA
94
n
96
ALA
94
B
SER
95
n
97
SER
95
B
HIS
96
n
98
HIS
96
B
PRO
97
n
99
PRO
97
B
GLU
98
n
100
GLU
98
B
GLU
99
n
101
GLU
99
B
ALA
100
n
102
ALA
100
B
ASP
101
n
103
ASP
101
B
PHE
102
n
104
PHE
102
B
LEU
103
n
105
LEU
103
B
ILE
104
n
106
ILE
104
B
THR
105
n
107
THR
105
B
LEU
106
n
108
LEU
106
B
VAL
107
n
109
VAL
107
B
SER
108
n
110
SER
108
B
VAL
109
n
111
VAL
109
B
ASP
110
n
112
ASP
110
B
GLU
111
n
113
GLU
111
B
GLY
112
n
114
GLY
112
B
LEU
113
n
115
LEU
113
B
ARG
114
n
116
ARG
114
B
LYS
115
n
117
LYS
115
B
ARG
116
n
118
ARG
116
B
ILE
117
n
119
ILE
117
B
LEU
118
n
120
LEU
118
B
LEU
119
n
121
LEU
119
B
ASP
120
n
122
ASP
120
B
LEU
121
n
123
LEU
121
B
GLU
122
n
124
GLU
122
B
LYS
123
n
125
LYS
123
B
SER
124
n
126
SER
124
B
GLN
125
n
127
GLN
125
B
ARG
126
n
128
ARG
126
B
VAL
127
n
129
VAL
127
B
PHE
128
n
130
PHE
128
B
PHE
129
n
131
PHE
129
B
ASP
130
n
132
ASP
130
B
PHE
131
n
133
PHE
131
B
VAL
132
n
134
VAL
132
B
ARG
133
n
135
ARG
133
B
GLU
134
n
136
GLU
134
B
LYS
135
n
137
LYS
135
B
LEU
136
n
138
LEU
136
B
LYS
137
n
139
LYS
137
B
ASP
138
n
140
ASP
138
B
LEU
139
n
141
LEU
139
B
ASP
140
n
142
ASP
140
B
LEU
141
n
143
LEU
141
B
ALA
142
n
144
ALA
142
B
GLU
143
n
145
GLU
143
B
ASP
144
n
146
ASP
144
B
VAL
145
n
147
VAL
145
B
THR
146
n
148
THR
146
B
GLU
147
n
149
GLU
147
B
GLU
148
n
150
GLU
148
B
ILE
149
n
151
ILE
149
B
ALA
150
n
152
ALA
150
B
LEU
151
n
153
LEU
151
B
LYS
152
n
154
LYS
152
B
PHE
153
n
155
PHE
153
B
LEU
154
n
156
LEU
154
B
MSE
155
n
157
MSE
155
B
TRP
156
n
158
TRP
156
B
PHE
157
n
159
PHE
157
B
PHE
158
n
160
PHE
158
B
SER
159
n
161
SER
159
B
GLY
160
n
162
GLY
160
B
PHE
161
n
163
PHE
161
B
GLU
162
n
164
GLU
162
B
GLU
163
n
165
GLU
163
B
VAL
164
n
166
VAL
164
B
TYR
165
n
167
TYR
165
B
LEU
166
n
168
LEU
166
B
ARG
167
n
169
ARG
167
B
THR
168
n
170
THR
168
B
TYR
169
n
171
TYR
169
B
GLN
170
n
172
GLN
170
B
GLY
171
n
173
GLY
171
B
LYS
172
n
174
LYS
172
B
PRO
173
n
175
PRO
173
B
GLU
174
n
176
GLU
174
B
LEU
175
n
177
LEU
175
B
LEU
176
n
178
LEU
176
B
LYS
177
n
179
LYS
177
B
ARG
178
n
180
ARG
178
B
ASP
179
n
181
ASP
179
B
MSE
180
n
182
MSE
180
B
ASN
181
n
183
ASN
181
B
THR
182
n
184
THR
182
B
LEU
183
n
185
LEU
183
B
VAL
184
n
186
VAL
184
B
GLU
185
n
187
GLU
185
B
GLU
186
n
188
GLU
186
B
VAL
187
n
189
VAL
187
B
LYS
188
n
190
LYS
188
B
VAL
189
n
191
VAL
189
B
MSE
190
n
192
MSE
190
B
LEU
191
n
193
LEU
191
B
ARG
192
n
194
ARG
192
B
ILE
193
n
195
ILE
193
B
LEU
194
n
196
LEU
194
B
LYS
195
n
197
LYS
195
B
LYS
196
n
198
LYS
196
B
GLY
197
n
199
GLY
197
B
MSE
198
n
200
MSE
198
B
THR
199
n
201
THR
199
B
LYS
200
n
202
LYS
200
B
DG
1
n
1
DG
1
C
DA
2
n
2
DA
2
C
DC
3
n
3
DC
3
C
DT
4
n
4
DT
4
C
DG
5
n
5
DG
5
C
DA
6
n
6
DA
6
C
DC
7
n
7
DC
7
C
DT
8
n
8
DT
8
C
DG
9
n
9
DG
9
C
DA
10
n
10
DA
10
C
DC
11
n
11
DC
11
C
DA
12
n
12
DA
12
C
n
13
13
C
n
14
14
C
n
15
15
C
n
16
16
C
n
17
17
C
n
18
18
C
n
19
19
C
n
20
20
C
n
21
21
C
n
22
22
C
n
23
23
C
n
24
24
C
n
1
1
D
n
2
2
D
n
3
3
D
n
4
4
D
n
5
5
D
n
6
6
D
n
7
7
D
n
8
8
D
n
9
9
D
n
10
10
D
n
11
11
D
n
12
12
D
DT
13
n
13
DT
13
D
DG
14
n
14
DG
14
D
DT
15
n
15
DT
15
D
DC
16
n
16
DC
16
D
DA
17
n
17
DA
17
D
DG
18
n
18
DG
18
D
DT
19
n
19
DT
19
D
DC
20
n
20
DC
20
D
DA
21
n
21
DA
21
D
DG
22
n
22
DG
22
D
DT
23
n
23
DT
23
D
DC
24
n
24
DC
24
D
1.1245
-0.7534
0.1349
0.5349
-0.1813
1.0597
-0.0989
0.1082
0.1008
0.0626
-0.0389
-0.1016
0.1800
-0.1722
0.1377
0.0524
-0.0362
-0.0001
0.0569
-0.0208
0.0992
refined
31.3230
9.2920
4.2830
X-RAY DIFFRACTION
2.8806
-1.2621
-0.7796
0.6254
0.5231
0.9409
-0.3483
-0.2670
-0.0429
0.2213
0.1358
0.0772
0.3226
-0.0292
0.2124
0.1510
-0.0003
0.0460
0.1015
0.0018
0.0732
refined
22.6140
6.4280
27.3950
X-RAY DIFFRACTION
A
1
A
200
X-RAY DIFFRACTION
1
B
1
B
200
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
8
octameric
12340
-116
43100
A
MSE
1
SELENOMETHIONINE
A
MSE
3
MET
A
MSE
56
SELENOMETHIONINE
A
MSE
58
MET
A
MSE
71
SELENOMETHIONINE
A
MSE
73
MET
A
MSE
82
SELENOMETHIONINE
A
MSE
84
MET
A
MSE
155
SELENOMETHIONINE
A
MSE
157
MET
A
MSE
180
SELENOMETHIONINE
A
MSE
182
MET
A
MSE
190
SELENOMETHIONINE
A
MSE
192
MET
A
MSE
198
SELENOMETHIONINE
A
MSE
200
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
3
MET
B
MSE
56
SELENOMETHIONINE
B
MSE
58
MET
B
MSE
71
SELENOMETHIONINE
B
MSE
73
MET
B
MSE
82
SELENOMETHIONINE
B
MSE
84
MET
B
MSE
155
SELENOMETHIONINE
B
MSE
157
MET
B
MSE
180
SELENOMETHIONINE
B
MSE
182
MET
B
MSE
190
SELENOMETHIONINE
B
MSE
192
MET
B
MSE
198
SELENOMETHIONINE
B
MSE
200
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
LYS
18
A
CG
LYS
20
1
Y
1
A
CD
LYS
18
A
CD
LYS
20
1
Y
1
A
CE
LYS
18
A
CE
LYS
20
1
Y
1
A
NZ
LYS
18
A
NZ
LYS
20
1
Y
1
A
NE
ARG
23
A
NE
ARG
25
1
Y
1
A
CZ
ARG
23
A
CZ
ARG
25
1
Y
1
A
NH1
ARG
23
A
NH1
ARG
25
1
Y
1
A
NH2
ARG
23
A
NH2
ARG
25
1
Y
1
A
CG
GLU
31
A
CG
GLU
33
1
Y
1
A
CD
GLU
31
A
CD
GLU
33
1
Y
1
A
OE1
GLU
31
A
OE1
GLU
33
1
Y
1
A
OE2
GLU
31
A
OE2
GLU
33
1
Y
1
A
CE
LYS
32
A
CE
LYS
34
1
Y
1
A
NZ
LYS
32
A
NZ
LYS
34
1
Y
1
A
CG
LYS
37
A
CG
LYS
39
1
Y
1
A
CD
LYS
37
A
CD
LYS
39
1
Y
1
A
CE
LYS
37
A
CE
LYS
39
1
Y
1
A
NZ
LYS
37
A
NZ
LYS
39
1
Y
1
A
CG
LYS
45
A
CG
LYS
47
1
Y
1
A
CD
LYS
45
A
CD
LYS
47
1
Y
1
A
CE
LYS
45
A
CE
LYS
47
1
Y
1
A
NZ
LYS
45
A
NZ
LYS
47
1
Y
1
A
CG
GLU
60
A
CG
GLU
62
1
Y
1
A
CD
GLU
60
A
CD
GLU
62
1
Y
1
A
OE1
GLU
60
A
OE1
GLU
62
1
Y
1
A
OE2
GLU
60
A
OE2
GLU
62
1
Y
1
A
CD
LYS
64
A
CD
LYS
66
1
Y
1
A
CE
LYS
64
A
CE
LYS
66
1
Y
1
A
NZ
LYS
64
A
NZ
LYS
66
1
Y
1
A
CG
ARG
74
A
CG
ARG
76
1
Y
1
A
CD
ARG
74
A
CD
ARG
76
1
Y
1
A
NE
ARG
74
A
NE
ARG
76
1
Y
1
A
CZ
ARG
74
A
CZ
ARG
76
1
Y
1
A
NH1
ARG
74
A
NH1
ARG
76
1
Y
1
A
NH2
ARG
74
A
NH2
ARG
76
1
Y
1
A
CD
LYS
89
A
CD
LYS
91
1
Y
1
A
CE
LYS
89
A
CE
LYS
91
1
Y
1
A
NZ
LYS
89
A
NZ
LYS
91
1
Y
1
A
CG
GLU
91
A
CG
GLU
93
1
Y
1
A
CD
GLU
91
A
CD
GLU
93
1
Y
1
A
OE1
GLU
91
A
OE1
GLU
93
1
Y
1
A
OE2
GLU
91
A
OE2
GLU
93
1
Y
1
A
CD1
ILE
104
A
CD1
ILE
106
1
Y
1
A
CB
GLU
111
A
CB
GLU
113
1
Y
1
A
CG
GLU
111
A
CG
GLU
113
1
Y
1
A
CD
GLU
111
A
CD
GLU
113
1
Y
1
A
OE1
GLU
111
A
OE1
GLU
113
1
Y
1
A
OE2
GLU
111
A
OE2
GLU
113
1
Y
1
A
CD
LYS
115
A
CD
LYS
117
1
Y
1
A
CE
LYS
115
A
CE
LYS
117
1
Y
1
A
NZ
LYS
115
A
NZ
LYS
117
1
Y
1
A
CG
LYS
123
A
CG
LYS
125
1
Y
1
A
CD
LYS
123
A
CD
LYS
125
1
Y
1
A
CE
LYS
123
A
CE
LYS
125
1
Y
1
A
NZ
LYS
123
A
NZ
LYS
125
1
Y
1
A
NZ
LYS
137
A
NZ
LYS
139
1
Y
1
A
CB
GLU
143
A
CB
GLU
145
1
Y
1
A
CG
GLU
143
A
CG
GLU
145
1
Y
1
A
CD
GLU
143
A
CD
GLU
145
1
Y
1
A
OE1
GLU
143
A
OE1
GLU
145
1
Y
1
A
OE2
GLU
143
A
OE2
GLU
145
1
Y
1
A
CG
GLU
148
A
CG
GLU
150
1
Y
1
A
CD
GLU
148
A
CD
GLU
150
1
Y
1
A
OE1
GLU
148
A
OE1
GLU
150
1
Y
1
A
OE2
GLU
148
A
OE2
GLU
150
1
Y
1
A
CD1
ILE
149
A
CD1
ILE
151
1
Y
1
A
CD
LYS
172
A
CD
LYS
174
1
Y
1
A
CE
LYS
172
A
CE
LYS
174
1
Y
1
A
NZ
LYS
172
A
NZ
LYS
174
1
Y
1
A
CG
ARG
178
A
CG
ARG
180
1
Y
1
A
CD
ARG
178
A
CD
ARG
180
1
Y
1
A
NE
ARG
178
A
NE
ARG
180
1
Y
1
A
CZ
ARG
178
A
CZ
ARG
180
1
Y
1
A
NH1
ARG
178
A
NH1
ARG
180
1
Y
1
A
NH2
ARG
178
A
NH2
ARG
180
1
Y
1
A
CG
ARG
192
A
CG
ARG
194
1
Y
1
A
CD
ARG
192
A
CD
ARG
194
1
Y
1
A
NE
ARG
192
A
NE
ARG
194
1
Y
1
A
CZ
ARG
192
A
CZ
ARG
194
1
Y
1
A
NH1
ARG
192
A
NH1
ARG
194
1
Y
1
A
NH2
ARG
192
A
NH2
ARG
194
1
Y
1
A
CD
LYS
200
A
CD
LYS
202
1
Y
1
A
CE
LYS
200
A
CE
LYS
202
1
Y
1
A
NZ
LYS
200
A
NZ
LYS
202
1
Y
1
B
CG
LYS
4
B
CG
LYS
6
1
Y
1
B
CD
LYS
4
B
CD
LYS
6
1
Y
1
B
CE
LYS
4
B
CE
LYS
6
1
Y
1
B
NZ
LYS
4
B
NZ
LYS
6
1
Y
1
B
CG
LYS
18
B
CG
LYS
20
1
Y
1
B
CD
LYS
18
B
CD
LYS
20
1
Y
1
B
CE
LYS
18
B
CE
LYS
20
1
Y
1
B
NZ
LYS
18
B
NZ
LYS
20
1
Y
1
B
NE
ARG
23
B
NE
ARG
25
1
Y
1
B
CZ
ARG
23
B
CZ
ARG
25
1
Y
1
B
NH1
ARG
23
B
NH1
ARG
25
1
Y
1
B
NH2
ARG
23
B
NH2
ARG
25
1
Y
1
B
CG
GLU
31
B
CG
GLU
33
1
Y
1
B
CD
GLU
31
B
CD
GLU
33
1
Y
1
B
OE1
GLU
31
B
OE1
GLU
33
1
Y
1
B
OE2
GLU
31
B
OE2
GLU
33
1
Y
1
B
CG
LYS
32
B
CG
LYS
34
1
Y
1
B
CD
LYS
32
B
CD
LYS
34
1
Y
1
B
CE
LYS
32
B
CE
LYS
34
1
Y
1
B
NZ
LYS
32
B
NZ
LYS
34
1
Y
1
B
CG
LYS
37
B
CG
LYS
39
1
Y
1
B
CD
LYS
37
B
CD
LYS
39
1
Y
1
B
CE
LYS
37
B
CE
LYS
39
1
Y
1
B
NZ
LYS
37
B
NZ
LYS
39
1
Y
1
B
CG
LYS
45
B
CG
LYS
47
1
Y
1
B
CD
LYS
45
B
CD
LYS
47
1
Y
1
B
CE
LYS
45
B
CE
LYS
47
1
Y
1
B
NZ
LYS
45
B
NZ
LYS
47
1
Y
1
B
CG
GLU
60
B
CG
GLU
62
1
Y
1
B
CD
GLU
60
B
CD
GLU
62
1
Y
1
B
OE1
GLU
60
B
OE1
GLU
62
1
Y
1
B
OE2
GLU
60
B
OE2
GLU
62
1
Y
1
B
CG
LYS
64
B
CG
LYS
66
1
Y
1
B
CD
LYS
64
B
CD
LYS
66
1
Y
1
B
CE
LYS
64
B
CE
LYS
66
1
Y
1
B
NZ
LYS
64
B
NZ
LYS
66
1
Y
1
B
CG
LYS
72
B
CG
LYS
74
1
Y
1
B
CD
LYS
72
B
CD
LYS
74
1
Y
1
B
CE
LYS
72
B
CE
LYS
74
1
Y
1
B
NZ
LYS
72
B
NZ
LYS
74
1
Y
1
B
CG
GLU
83
B
CG
GLU
85
1
Y
1
B
CD
GLU
83
B
CD
GLU
85
1
Y
1
B
OE1
GLU
83
B
OE1
GLU
85
1
Y
1
B
OE2
GLU
83
B
OE2
GLU
85
1
Y
1
B
CG
ARG
84
B
CG
ARG
86
1
Y
1
B
CD
ARG
84
B
CD
ARG
86
1
Y
1
B
NE
ARG
84
B
NE
ARG
86
1
Y
1
B
CZ
ARG
84
B
CZ
ARG
86
1
Y
1
B
NH1
ARG
84
B
NH1
ARG
86
1
Y
1
B
NH2
ARG
84
B
NH2
ARG
86
1
Y
1
B
CG1
ILE
86
B
CG1
ILE
88
1
Y
1
B
CG2
ILE
86
B
CG2
ILE
88
1
Y
1
B
CD1
ILE
86
B
CD1
ILE
88
1
Y
1
B
CG
GLU
87
B
CG
GLU
89
1
Y
1
B
CD
GLU
87
B
CD
GLU
89
1
Y
1
B
OE1
GLU
87
B
OE1
GLU
89
1
Y
1
B
OE2
GLU
87
B
OE2
GLU
89
1
Y
1
B
CG
LYS
88
B
CG
LYS
90
1
Y
1
B
CD
LYS
88
B
CD
LYS
90
1
Y
1
B
CE
LYS
88
B
CE
LYS
90
1
Y
1
B
NZ
LYS
88
B
NZ
LYS
90
1
Y
1
B
CD
LYS
89
B
CD
LYS
91
1
Y
1
B
CE
LYS
89
B
CE
LYS
91
1
Y
1
B
NZ
LYS
89
B
NZ
LYS
91
1
Y
1
B
CG
GLU
91
B
CG
GLU
93
1
Y
1
B
CD
GLU
91
B
CD
GLU
93
1
Y
1
B
OE1
GLU
91
B
OE1
GLU
93
1
Y
1
B
OE2
GLU
91
B
OE2
GLU
93
1
Y
1
B
CD1
ILE
104
B
CD1
ILE
106
1
Y
1
B
CB
GLU
111
B
CB
GLU
113
1
Y
1
B
CG
GLU
111
B
CG
GLU
113
1
Y
1
B
CD
GLU
111
B
CD
GLU
113
1
Y
1
B
OE1
GLU
111
B
OE1
GLU
113
1
Y
1
B
OE2
GLU
111
B
OE2
GLU
113
1
Y
1
B
CG
LYS
115
B
CG
LYS
117
1
Y
1
B
CD
LYS
115
B
CD
LYS
117
1
Y
1
B
CE
LYS
115
B
CE
LYS
117
1
Y
1
B
NZ
LYS
115
B
NZ
LYS
117
1
Y
1
B
CG
GLU
122
B
CG
GLU
124
1
Y
1
B
CD
GLU
122
B
CD
GLU
124
1
Y
1
B
OE1
GLU
122
B
OE1
GLU
124
1
Y
1
B
OE2
GLU
122
B
OE2
GLU
124
1
Y
1
B
CG
LYS
123
B
CG
LYS
125
1
Y
1
B
CD
LYS
123
B
CD
LYS
125
1
Y
1
B
CE
LYS
123
B
CE
LYS
125
1
Y
1
B
NZ
LYS
123
B
NZ
LYS
125
1
Y
1
B
CG
LYS
135
B
CG
LYS
137
1
Y
1
B
CD
LYS
135
B
CD
LYS
137
1
Y
1
B
CE
LYS
135
B
CE
LYS
137
1
Y
1
B
NZ
LYS
135
B
NZ
LYS
137
1
Y
1
B
CG
LYS
137
B
CG
LYS
139
1
Y
1
B
CD
LYS
137
B
CD
LYS
139
1
Y
1
B
CE
LYS
137
B
CE
LYS
139
1
Y
1
B
NZ
LYS
137
B
NZ
LYS
139
1
Y
1
B
CB
GLU
143
B
CB
GLU
145
1
Y
1
B
CG
GLU
143
B
CG
GLU
145
1
Y
1
B
CD
GLU
143
B
CD
GLU
145
1
Y
1
B
OE1
GLU
143
B
OE1
GLU
145
1
Y
1
B
OE2
GLU
143
B
OE2
GLU
145
1
Y
1
B
CD1
ILE
149
B
CD1
ILE
151
1
Y
1
B
CG
GLU
162
B
CG
GLU
164
1
Y
1
B
CD
GLU
162
B
CD
GLU
164
1
Y
1
B
OE1
GLU
162
B
OE1
GLU
164
1
Y
1
B
OE2
GLU
162
B
OE2
GLU
164
1
Y
1
B
CG
GLU
163
B
CG
GLU
165
1
Y
1
B
CD
GLU
163
B
CD
GLU
165
1
Y
1
B
OE1
GLU
163
B
OE1
GLU
165
1
Y
1
B
OE2
GLU
163
B
OE2
GLU
165
1
Y
1
B
CG
LEU
166
B
CG
LEU
168
1
Y
1
B
CD1
LEU
166
B
CD1
LEU
168
1
Y
1
B
CD2
LEU
166
B
CD2
LEU
168
1
Y
1
B
CG
ARG
167
B
CG
ARG
169
1
Y
1
B
CD
ARG
167
B
CD
ARG
169
1
Y
1
B
NE
ARG
167
B
NE
ARG
169
1
Y
1
B
CZ
ARG
167
B
CZ
ARG
169
1
Y
1
B
NH1
ARG
167
B
NH1
ARG
169
1
Y
1
B
NH2
ARG
167
B
NH2
ARG
169
1
Y
1
B
CG
GLN
170
B
CG
GLN
172
1
Y
1
B
CD
GLN
170
B
CD
GLN
172
1
Y
1
B
OE1
GLN
170
B
OE1
GLN
172
1
Y
1
B
NE2
GLN
170
B
NE2
GLN
172
1
Y
1
B
CD
LYS
172
B
CD
LYS
174
1
Y
1
B
CE
LYS
172
B
CE
LYS
174
1
Y
1
B
NZ
LYS
172
B
NZ
LYS
174
1
Y
1
B
CG
GLU
174
B
CG
GLU
176
1
Y
1
B
CD
GLU
174
B
CD
GLU
176
1
Y
1
B
OE1
GLU
174
B
OE1
GLU
176
1
Y
1
B
OE2
GLU
174
B
OE2
GLU
176
1
Y
1
B
CG
LYS
177
B
CG
LYS
179
1
Y
1
B
CD
LYS
177
B
CD
LYS
179
1
Y
1
B
CE
LYS
177
B
CE
LYS
179
1
Y
1
B
NZ
LYS
177
B
NZ
LYS
179
1
Y
1
B
CG
ARG
178
B
CG
ARG
180
1
Y
1
B
CD
ARG
178
B
CD
ARG
180
1
Y
1
B
NE
ARG
178
B
NE
ARG
180
1
Y
1
B
CZ
ARG
178
B
CZ
ARG
180
1
Y
1
B
NH1
ARG
178
B
NH1
ARG
180
1
Y
1
B
NH2
ARG
178
B
NH2
ARG
180
1
Y
1
B
CG
GLU
185
B
CG
GLU
187
1
Y
1
B
CD
GLU
185
B
CD
GLU
187
1
Y
1
B
OE1
GLU
185
B
OE1
GLU
187
1
Y
1
B
OE2
GLU
185
B
OE2
GLU
187
1
Y
1
B
CG
LYS
188
B
CG
LYS
190
1
Y
1
B
CD
LYS
188
B
CD
LYS
190
1
Y
1
B
CE
LYS
188
B
CE
LYS
190
1
Y
1
B
NZ
LYS
188
B
NZ
LYS
190
1
Y
1
B
CG
LYS
195
B
CG
LYS
197
1
Y
1
B
CD
LYS
195
B
CD
LYS
197
1
Y
1
B
CE
LYS
195
B
CE
LYS
197
1
Y
1
B
NZ
LYS
195
B
NZ
LYS
197
1
Y
1
B
CG
LYS
196
B
CG
LYS
198
1
Y
1
B
CD
LYS
196
B
CD
LYS
198
1
Y
1
B
CE
LYS
196
B
CE
LYS
198
1
Y
1
B
NZ
LYS
196
B
NZ
LYS
198
1
Y
1
B
CD
LYS
200
B
CD
LYS
202
1
Y
1
B
CE
LYS
200
B
CE
LYS
202
1
Y
1
B
NZ
LYS
200
B
NZ
LYS
202
1
Y
1
C
O5'
DG
1
C
O5'
DG
1
1
Y
1
A
GLY
-1
A
GLY
1
1
Y
1
A
HIS
0
A
HIS
2
1
Y
1
B
GLY
-1
B
GLY
1
1
Y
1
B
HIS
0
B
HIS
2
1
Y
1
C
DT
13
C
DT
13
1
Y
1
C
DG
14
C
DG
14
1
Y
1
C
DT
15
C
DT
15
1
Y
1
C
DC
16
C
DC
16
1
Y
1
C
DA
17
C
DA
17
1
Y
1
C
DG
18
C
DG
18
1
Y
1
C
DT
19
C
DT
19
1
Y
1
C
DC
20
C
DC
20
1
Y
1
C
DA
21
C
DA
21
1
Y
1
C
DG
22
C
DG
22
1
Y
1
C
DT
23
C
DT
23
1
Y
1
C
DC
24
C
DC
24
1
Y
1
D
DG
1
D
DG
1
1
Y
1
D
DA
2
D
DA
2
1
Y
1
D
DC
3
D
DC
3
1
Y
1
D
DT
4
D
DT
4
1
Y
1
D
DG
5
D
DG
5
1
Y
1
D
DA
6
D
DA
6
1
Y
1
D
DC
7
D
DC
7
1
Y
1
D
DT
8
D
DT
8
1
Y
1
D
DG
9
D
DG
9
1
Y
1
D
DA
10
D
DA
10
1
Y
1
D
DC
11
D
DC
11
1
Y
1
D
DA
12
D
DA
12
1
Y
1
7.22
1.20
110.70
117.92
C
C
C
O5'
P
OP2
DA
DA
DA
2
2
2
N
1
-6.04
1.00
110.10
104.06
C
C
C
C1'
O4'
C4'
DC
DC
DC
3
3
3
N
1
-8.00
0.90
105.70
97.70
C
C
C
O5'
P
OP1
DT
DT
DT
8
8
8
N
1
-7.13
0.90
105.70
98.57
D
D
D
O5'
P
OP1
DG
DG
DG
18
18
18
N
1
-7.84
1.00
110.10
102.26
D
D
D
C1'
O4'
C4'
DG
DG
DG
18
18
18
N
1
1.94
0.30
108.30
110.24
D
D
D
O4'
C1'
N9
DG
DG
DG
22
22
22
N
1
D
D
O3'
P
DT
DG
13
14
-0.097
0.012
1.607
1.510
Y
1
A
LYS
45
70.47
-57.41
1
A
HIS
96
-151.05
47.31
1
A
GLU
111
-21.86
-48.31
1
A
LYS
123
-46.28
-72.60
1
A
VAL
127
-56.59
-76.16
1
A
ASP
138
-57.90
3.79
1
A
GLU
143
-74.27
21.54
1
A
ASP
144
-143.77
17.53
1
A
PHE
157
-38.41
-70.94
1
A
GLU
162
-38.32
-72.63
1
A
LYS
172
-148.73
42.50
1
B
LYS
45
66.83
-52.20
1
B
LYS
72
-59.52
-8.68
1
B
HIS
96
-149.69
47.94
1
B
GLU
111
-21.05
-48.54
1
B
LYS
123
-47.49
-73.97
1
B
VAL
127
-57.51
-76.00
1
B
ASP
138
-58.91
4.95
1
B
GLU
143
-73.53
22.00
1
B
ASP
144
-144.96
17.86
1
B
PHE
157
-38.52
-71.27
1
B
GLU
162
-38.98
-72.64
1
B
LYS
172
-147.99
43.69
221.920
82.3858
32.460
0.5800
0.0000
-1.8300
-1.1300
0.0000
0.9200
0.9480
0.9080
U VALUES : WITH TLS ADDED HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.2675
0.2000
0.2033
3.2000
33.2300
549
11471
4.8000
99.8300
0.2524
0.1813
1.000
1.000
0.8025
36.0560
0.3910
0.5004
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.5000
0.8000
0.8000
1.2000
PDB ENTRY 2ID6
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
3.2000
33.2300
6
3606
0
488
3112
0.013
0.018
3718
0.004
0.020
3205
1.651
1.847
5127
1.072
3.000
7324
6.024
5.000
398
36.633
23.986
143
18.962
15.000
481
21.684
15.000
16
0.081
0.200
558
0.009
0.020
3888
0.004
0.020
864
1
A
1
10535
X-RAY DIFFRACTION
interatomic distance
0.080
0.050
2
B
1
10535
X-RAY DIFFRACTION
interatomic distance
0.080
0.050
0.4290
0.2530
3.2830
36
805
841
20
100.0000
3.200
50.000
4I6Z
11502
0.095
2.338
1
9.800
4.100
100.000
0.519
3.200
3.260
574
1.552
1
4.200
100.000
0.287
3.260
3.310
572
1.510
1
4.200
100.000
0.204
3.310
3.380
545
1.605
1
4.200
100.000
0.117
3.380
3.450
589
1.498
1
4.200
100.000
0.267
3.450
3.520
579
1.724
1
4.200
100.000
0.243
3.520
3.600
547
1.512
1
4.100
100.000
0.200
3.600
3.690
551
1.429
1
4.200
100.000
0.181
3.690
3.790
584
1.585
1
4.200
100.000
0.159
3.790
3.910
572
1.542
1
4.100
100.000
0.126
3.910
4.030
559
1.657
1
4.200
100.000
0.106
4.030
4.180
590
1.693
1
4.200
100.000
0.090
4.180
4.340
557
1.775
1
4.200
100.000
0.086
4.340
4.540
583
1.747
1
4.200
100.000
0.075
4.540
4.780
561
2.129
1
4.200
100.000
0.079
4.780
5.080
590
2.365
1
4.100
100.000
0.086
5.080
5.470
569
2.672
1
4.100
100.000
0.083
5.470
6.020
587
2.811
1
4.100
100.000
0.084
6.020
6.890
584
3.782
1
4.100
100.000
0.062
6.890
8.670
586
4.848
1
4.100
100.000
0.053
8.670
50.000
623
7.467
1
3.800
99.400
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
HKL-3000
data reduction
HKL-3000
data scaling
HKL-3000
phasing
MOLREP
Crystal structure of the transcriptional regulator TM1030 with 24bp DNA oligonucleotide
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
SER
3
A
SER
5
HELX_P
A
GLY
20
A
GLY
22
1
1
18
A
THR
25
A
THR
27
HELX_P
A
GLY
34
A
GLY
36
1
2
10
A
ALA
36
A
ALA
38
HELX_P
A
PHE
44
A
PHE
46
1
3
9
A
ASN
46
A
ASN
48
HELX_P
A
ARG
74
A
ARG
76
1
4
29
A
ASP
77
A
ASP
79
HELX_P
A
HIS
96
A
HIS
98
1
5
20
A
HIS
96
A
HIS
98
HELX_P
A
ILE
104
A
ILE
106
1
6
9
A
THR
105
A
THR
107
HELX_P
A
VAL
109
A
VAL
111
5
7
5
A
ASP
110
A
ASP
112
HELX_P
A
ASP
138
A
ASP
140
1
8
29
A
THR
146
A
THR
148
HELX_P
A
TYR
169
A
TYR
171
1
9
24
A
LYS
172
A
LYS
174
HELX_P
A
THR
199
A
THR
201
1
10
28
B
SER
3
B
SER
5
HELX_P
B
GLY
20
B
GLY
22
1
11
18
B
THR
25
B
THR
27
HELX_P
B
GLY
34
B
GLY
36
1
12
10
B
ALA
36
B
ALA
38
HELX_P
B
PHE
44
B
PHE
46
1
13
9
B
ASN
46
B
ASN
48
HELX_P
B
ARG
74
B
ARG
76
1
14
29
B
ASP
77
B
ASP
79
HELX_P
B
HIS
96
B
HIS
98
1
15
20
B
HIS
96
B
HIS
98
HELX_P
B
ILE
104
B
ILE
106
1
16
9
B
THR
105
B
THR
107
HELX_P
B
VAL
109
B
VAL
111
5
17
5
B
ASP
110
B
ASP
112
HELX_P
B
ASP
138
B
ASP
140
1
18
29
B
THR
146
B
THR
148
HELX_P
B
TYR
169
B
TYR
171
1
19
24
B
LYS
172
B
LYS
174
HELX_P
B
THR
199
B
THR
201
1
20
28
covale
1.322
both
A
MSE
1
A
C
MSE
3
1_555
A
LEU
2
A
N
LEU
4
1_555
covale
1.324
both
A
TYR
55
A
C
TYR
57
1_555
A
MSE
56
A
N
MSE
58
1_555
covale
1.328
both
A
MSE
56
A
C
MSE
58
1_555
A
SER
57
A
N
SER
59
1_555
covale
1.320
both
A
LEU
70
A
C
LEU
72
1_555
A
MSE
71
A
N
MSE
73
1_555
covale
1.315
both
A
MSE
71
A
C
MSE
73
1_555
A
LYS
72
A
N
LYS
74
1_555
covale
1.323
both
A
PHE
81
A
C
PHE
83
1_555
A
MSE
82
A
N
MSE
84
1_555
covale
1.324
both
A
MSE
82
A
C
MSE
84
1_555
A
GLU
83
A
N
GLU
85
1_555
covale
1.324
both
A
LEU
154
A
C
LEU
156
1_555
A
MSE
155
A
N
MSE
157
1_555
covale
1.317
both
A
MSE
155
A
C
MSE
157
1_555
A
TRP
156
A
N
TRP
158
1_555
covale
1.332
both
A
ASP
179
A
C
ASP
181
1_555
A
MSE
180
A
N
MSE
182
1_555
covale
1.322
both
A
MSE
180
A
C
MSE
182
1_555
A
ASN
181
A
N
ASN
183
1_555
covale
1.339
both
A
VAL
189
A
C
VAL
191
1_555
A
MSE
190
A
N
MSE
192
1_555
covale
1.326
both
A
MSE
190
A
C
MSE
192
1_555
A
LEU
191
A
N
LEU
193
1_555
covale
1.327
both
A
GLY
197
A
C
GLY
199
1_555
A
MSE
198
A
N
MSE
200
1_555
covale
1.320
both
A
MSE
198
A
C
MSE
200
1_555
A
THR
199
A
N
THR
201
1_555
covale
1.332
both
B
MSE
1
B
C
MSE
3
1_555
B
LEU
2
B
N
LEU
4
1_555
covale
1.329
both
B
TYR
55
B
C
TYR
57
1_555
B
MSE
56
B
N
MSE
58
1_555
covale
1.327
both
B
MSE
56
B
C
MSE
58
1_555
B
SER
57
B
N
SER
59
1_555
covale
1.325
both
B
LEU
70
B
C
LEU
72
1_555
B
MSE
71
B
N
MSE
73
1_555
covale
1.322
both
B
MSE
71
B
C
MSE
73
1_555
B
LYS
72
B
N
LYS
74
1_555
covale
1.328
both
B
PHE
81
B
C
PHE
83
1_555
B
MSE
82
B
N
MSE
84
1_555
covale
1.335
both
B
MSE
82
B
C
MSE
84
1_555
B
GLU
83
B
N
GLU
85
1_555
covale
1.322
both
B
LEU
154
B
C
LEU
156
1_555
B
MSE
155
B
N
MSE
157
1_555
covale
1.316
both
B
MSE
155
B
C
MSE
157
1_555
B
TRP
156
B
N
TRP
158
1_555
covale
1.334
both
B
ASP
179
B
C
ASP
181
1_555
B
MSE
180
B
N
MSE
182
1_555
covale
1.327
both
B
MSE
180
B
C
MSE
182
1_555
B
ASN
181
B
N
ASN
183
1_555
covale
1.323
both
B
VAL
189
B
C
VAL
191
1_555
B
MSE
190
B
N
MSE
192
1_555
covale
1.326
both
B
MSE
190
B
C
MSE
192
1_555
B
LEU
191
B
N
LEU
193
1_555
covale
1.326
both
B
GLY
197
B
C
GLY
199
1_555
B
MSE
198
B
N
MSE
200
1_555
covale
1.328
both
B
MSE
198
B
C
MSE
200
1_555
B
THR
199
B
N
THR
201
1_555
hydrog
WATSON-CRICK
C
DG
1
C
N1
DG
1
1_555
D
DC
24
D
N3
DC
24
1_555
hydrog
WATSON-CRICK
C
DG
1
C
N2
DG
1
1_555
D
DC
24
D
O2
DC
24
1_555
hydrog
WATSON-CRICK
C
DG
1
C
O6
DG
1
1_555
D
DC
24
D
N4
DC
24
1_555
hydrog
WATSON-CRICK
C
DA
2
C
N1
DA
2
1_555
D
DT
23
D
N3
DT
23
1_555
hydrog
WATSON-CRICK
C
DA
2
C
N6
DA
2
1_555
D
DT
23
D
O4
DT
23
1_555
hydrog
WATSON-CRICK
C
DC
3
C
N3
DC
3
1_555
D
DG
22
D
N1
DG
22
1_555
hydrog
WATSON-CRICK
C
DC
3
C
N4
DC
3
1_555
D
DG
22
D
O6
DG
22
1_555
hydrog
WATSON-CRICK
C
DC
3
C
O2
DC
3
1_555
D
DG
22
D
N2
DG
22
1_555
hydrog
WATSON-CRICK
C
DT
4
C
N3
DT
4
1_555
D
DA
21
D
N1
DA
21
1_555
hydrog
WATSON-CRICK
C
DT
4
C
O4
DT
4
1_555
D
DA
21
D
N6
DA
21
1_555
hydrog
WATSON-CRICK
C
DG
5
C
N1
DG
5
1_555
D
DC
20
D
N3
DC
20
1_555
hydrog
WATSON-CRICK
C
DG
5
C
N2
DG
5
1_555
D
DC
20
D
O2
DC
20
1_555
hydrog
WATSON-CRICK
C
DG
5
C
O6
DG
5
1_555
D
DC
20
D
N4
DC
20
1_555
hydrog
WATSON-CRICK
C
DA
6
C
N1
DA
6
1_555
D
DT
19
D
N3
DT
19
1_555
hydrog
WATSON-CRICK
C
DA
6
C
N6
DA
6
1_555
D
DT
19
D
O4
DT
19
1_555
hydrog
WATSON-CRICK
C
DC
7
C
N3
DC
7
1_555
D
DG
18
D
N1
DG
18
1_555
hydrog
WATSON-CRICK
C
DC
7
C
N4
DC
7
1_555
D
DG
18
D
O6
DG
18
1_555
hydrog
WATSON-CRICK
C
DC
7
C
O2
DC
7
1_555
D
DG
18
D
N2
DG
18
1_555
hydrog
WATSON-CRICK
C
DT
8
C
N3
DT
8
1_555
D
DA
17
D
N1
DA
17
1_555
hydrog
WATSON-CRICK
C
DT
8
C
O4
DT
8
1_555
D
DA
17
D
N6
DA
17
1_555
hydrog
WATSON-CRICK
C
DG
9
C
N1
DG
9
1_555
D
DC
16
D
N3
DC
16
1_555
hydrog
WATSON-CRICK
C
DG
9
C
N2
DG
9
1_555
D
DC
16
D
O2
DC
16
1_555
hydrog
WATSON-CRICK
C
DG
9
C
O6
DG
9
1_555
D
DC
16
D
N4
DC
16
1_555
hydrog
WATSON-CRICK
C
DA
10
C
N1
DA
10
1_555
D
DT
15
D
N3
DT
15
1_555
hydrog
WATSON-CRICK
C
DA
10
C
N6
DA
10
1_555
D
DT
15
D
O4
DT
15
1_555
hydrog
WATSON-CRICK
C
DC
11
C
N3
DC
11
1_555
D
DG
14
D
N1
DG
14
1_555
hydrog
WATSON-CRICK
C
DC
11
C
N4
DC
11
1_555
D
DG
14
D
O6
DG
14
1_555
hydrog
WATSON-CRICK
C
DC
11
C
O2
DC
11
1_555
D
DG
14
D
N2
DG
14
1_555
hydrog
WATSON-CRICK
C
DA
12
C
N1
DA
12
1_555
D
DT
13
D
N3
DT
13
1_555
hydrog
WATSON-CRICK
C
DA
12
C
N6
DA
12
1_555
D
DT
13
D
O4
DT
13
1_555
Transcription Regulator/DNA
Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, PFAM TetR_N, Helix-turn-helix, TRANSCRIPTIONAL REGULATOR, DNA BINDING, Transcription Regulator-DNA complex
A
B
A
MSE
1
A
MSE
3
A
LYS
200
A
LYS
202
0
B
MSE
1
B
MSE
3
B
LYS
200
B
LYS
202
0
Q9X0C0_THEMA
UNP
1
1
Q9X0C0
MLSKRDAILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLIFHYFKNKEELYYQAYMSVTEKLQKEFENFLMKNRNRDIFD
FMERWIEKKLEYSASHPEEADFLITLVSVDEGLRKRILLDLEKSQRVFFDFVREKLKDLDLAEDVTEEIALKFLMWFFSG
FEEVYLRTYQGKPELLKRDMNTLVEEVKVMLRILKKGMTK
4I6Z
PDB
2
4I6Z
1
200
4I6Z
1
200
Q9X0C0
A
1
3
202
1
200
4I6Z
1
200
Q9X0C0
B
1
3
202
1
24
4I6Z
1
24
4I6Z
C
2
1
24
1
24
4I6Z
1
24
4I6Z
D
2
1
24
1
expression tag
GLY
-1
4I6Z
A
Q9X0C0
UNP
1
1
expression tag
HIS
0
4I6Z
A
Q9X0C0
UNP
2
2
expression tag
GLY
-1
4I6Z
B
Q9X0C0
UNP
1
2
expression tag
HIS
0
4I6Z
B
Q9X0C0
UNP
2
5
C 1 2 1