0.014348 0.000000 0.000000 -0.000000 0.012131 0.000000 0.000000 -0.000000 0.011097 0.000000 0.000000 0.000000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 69.695 82.432 90.113 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of a hypothetical protein (BACUNI_01406) from Bacteroides uniformis ATCC 8492 at 1.50 A resolution 10.2210/pdb4i8i/pdb pdb_00004i8i 100 1 KOHZU: Double Crystal Si(111) CCD 2012-10-18 ADSC QUANTUM 315 Double Crystal Si(111) MAD M x-ray 1 0.918401 1.0 0.979263 1.0 0.979485 1.0 8.2.2 ALS 0.918401,0.979263,0.979485 SYNCHROTRON ALS BEAMLINE 8.2.2 30751.283 hypothetical protein 1 man polymer 59.044 ACETATE ION 2 syn non-polymer 18.015 water 370 nat water no yes GNGCHANNDTIKVLAIGNSFSQDAVEQYLHELGEAEGIT(MSE)IIGN(MSE)FIGGCSLERHVQNIRNNAPAYAYRKVE KDGEKTETRS(MSE)TIEKALADEKWDYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVL(MSE)(MSE)HQTWA YATNANHTGFKNYDQNQ(MSE)K(MSE)YTSIVDAVKKAANLVGIKKIIPSGTAIQNARTSFIGDH(MSE)NRDGYHLDL TIGRYTAACTWFEALTHRNVTENPYSPEGIDPIHKKAAQ(MSE)AAHNAILYPDKVTELTELKKIAD GNGCHANNDTIKVLAIGNSFSQDAVEQYLHELGEAEGITMIIGNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTET RSMTIEKALADEKWDYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYATNANHTGFKNYDQNQMKM YTSIVDAVKKAANLVGIKKIIPSGTAIQNARTSFIGDHMNRDGYHLDLTIGRYTAACTWFEALTHRNVTENPYSPEGIDP IHKKAAQMAAHNAILYPDKVTELTELKKIAD A JCSG-418030 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 8492 sample ZP_02069989.1 411479 Bacteroides uniformis 562 Escherichia Coli PB1 Plasmid SpeedET 1 2.10 41.55 VAPOR DIFFUSION, SITTING DROP 6.0 0.2M calcium acetate, 20.0% polyethylene glycol 8000, 0.1M MES pH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI:Biology software citation_author database_2 struct_conn struct_ref_seq_dif struct_site repository Initial release Structure summary Refinement description Database references Database references Derived calculations 1 0 2013-01-16 1 1 2014-12-24 1 2 2017-11-15 1 3 2018-01-24 1 4 2023-02-01 _software.classification _software.name _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2012-12-03 REL REL ACT ACETATE ION HOH water THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 23-292 OF THE TARGET SEQUENCE. ACT 300 2 ACT ACT 300 A ACT 301 2 ACT ACT 301 A HOH 302 3 HOH HOH 401 A HOH 303 3 HOH HOH 402 A HOH 304 3 HOH HOH 403 A HOH 305 3 HOH HOH 404 A HOH 306 3 HOH HOH 405 A HOH 307 3 HOH HOH 406 A HOH 308 3 HOH HOH 407 A HOH 309 3 HOH HOH 408 A HOH 310 3 HOH HOH 409 A HOH 311 3 HOH HOH 410 A HOH 312 3 HOH HOH 411 A HOH 313 3 HOH HOH 412 A HOH 314 3 HOH HOH 413 A HOH 315 3 HOH HOH 414 A HOH 316 3 HOH HOH 415 A HOH 317 3 HOH HOH 416 A HOH 318 3 HOH HOH 417 A HOH 319 3 HOH HOH 418 A HOH 320 3 HOH HOH 419 A HOH 321 3 HOH HOH 420 A HOH 322 3 HOH HOH 421 A HOH 323 3 HOH HOH 422 A HOH 324 3 HOH HOH 423 A HOH 325 3 HOH HOH 424 A HOH 326 3 HOH HOH 425 A HOH 327 3 HOH HOH 426 A HOH 328 3 HOH HOH 427 A HOH 329 3 HOH HOH 428 A HOH 330 3 HOH HOH 429 A HOH 331 3 HOH HOH 430 A HOH 332 3 HOH HOH 431 A HOH 333 3 HOH HOH 432 A HOH 334 3 HOH HOH 433 A HOH 335 3 HOH HOH 434 A HOH 336 3 HOH HOH 435 A HOH 337 3 HOH HOH 436 A HOH 338 3 HOH HOH 437 A HOH 339 3 HOH HOH 438 A HOH 340 3 HOH HOH 439 A HOH 341 3 HOH HOH 440 A HOH 342 3 HOH HOH 441 A HOH 343 3 HOH HOH 442 A HOH 344 3 HOH HOH 443 A HOH 345 3 HOH HOH 444 A HOH 346 3 HOH HOH 445 A HOH 347 3 HOH HOH 446 A HOH 348 3 HOH HOH 447 A HOH 349 3 HOH HOH 448 A HOH 350 3 HOH HOH 449 A HOH 351 3 HOH HOH 450 A HOH 352 3 HOH HOH 451 A HOH 353 3 HOH HOH 452 A HOH 354 3 HOH HOH 453 A HOH 355 3 HOH HOH 454 A HOH 356 3 HOH HOH 455 A HOH 357 3 HOH HOH 456 A HOH 358 3 HOH HOH 457 A HOH 359 3 HOH HOH 458 A HOH 360 3 HOH HOH 459 A HOH 361 3 HOH HOH 460 A HOH 362 3 HOH HOH 461 A HOH 363 3 HOH HOH 462 A HOH 364 3 HOH HOH 463 A HOH 365 3 HOH HOH 464 A HOH 366 3 HOH HOH 465 A HOH 367 3 HOH HOH 466 A HOH 368 3 HOH HOH 467 A HOH 369 3 HOH HOH 468 A HOH 370 3 HOH HOH 469 A HOH 371 3 HOH HOH 470 A HOH 372 3 HOH HOH 471 A HOH 373 3 HOH HOH 472 A HOH 374 3 HOH HOH 473 A HOH 375 3 HOH HOH 474 A HOH 376 3 HOH HOH 475 A HOH 377 3 HOH HOH 476 A HOH 378 3 HOH HOH 477 A HOH 379 3 HOH HOH 478 A HOH 380 3 HOH HOH 479 A HOH 381 3 HOH HOH 480 A HOH 382 3 HOH HOH 481 A HOH 383 3 HOH HOH 482 A HOH 384 3 HOH HOH 483 A HOH 385 3 HOH HOH 484 A HOH 386 3 HOH HOH 485 A HOH 387 3 HOH HOH 486 A HOH 388 3 HOH HOH 487 A HOH 389 3 HOH HOH 488 A HOH 390 3 HOH HOH 489 A HOH 391 3 HOH HOH 490 A HOH 392 3 HOH HOH 491 A HOH 393 3 HOH HOH 492 A HOH 394 3 HOH HOH 493 A HOH 395 3 HOH HOH 494 A HOH 396 3 HOH HOH 495 A HOH 397 3 HOH HOH 496 A HOH 398 3 HOH HOH 497 A HOH 399 3 HOH HOH 498 A HOH 400 3 HOH HOH 499 A HOH 401 3 HOH HOH 500 A HOH 402 3 HOH HOH 501 A HOH 403 3 HOH HOH 502 A HOH 404 3 HOH HOH 503 A HOH 405 3 HOH HOH 504 A HOH 406 3 HOH HOH 505 A HOH 407 3 HOH HOH 506 A HOH 408 3 HOH HOH 507 A HOH 409 3 HOH HOH 508 A HOH 410 3 HOH HOH 509 A HOH 411 3 HOH HOH 510 A HOH 412 3 HOH HOH 511 A HOH 413 3 HOH HOH 512 A HOH 414 3 HOH HOH 513 A HOH 415 3 HOH HOH 514 A HOH 416 3 HOH HOH 515 A HOH 417 3 HOH HOH 516 A HOH 418 3 HOH HOH 517 A HOH 419 3 HOH HOH 518 A HOH 420 3 HOH HOH 519 A HOH 421 3 HOH HOH 520 A HOH 422 3 HOH HOH 521 A HOH 423 3 HOH HOH 522 A HOH 424 3 HOH HOH 523 A HOH 425 3 HOH HOH 524 A HOH 426 3 HOH HOH 525 A HOH 427 3 HOH HOH 526 A HOH 428 3 HOH HOH 527 A HOH 429 3 HOH HOH 528 A HOH 430 3 HOH HOH 529 A HOH 431 3 HOH HOH 530 A HOH 432 3 HOH HOH 531 A HOH 433 3 HOH HOH 532 A HOH 434 3 HOH HOH 533 A HOH 435 3 HOH HOH 534 A HOH 436 3 HOH HOH 535 A HOH 437 3 HOH HOH 536 A HOH 438 3 HOH HOH 537 A HOH 439 3 HOH HOH 538 A HOH 440 3 HOH HOH 539 A HOH 441 3 HOH HOH 540 A HOH 442 3 HOH HOH 541 A HOH 443 3 HOH HOH 542 A HOH 444 3 HOH HOH 543 A HOH 445 3 HOH HOH 544 A HOH 446 3 HOH HOH 545 A HOH 447 3 HOH HOH 546 A HOH 448 3 HOH HOH 547 A HOH 449 3 HOH HOH 548 A HOH 450 3 HOH HOH 549 A HOH 451 3 HOH HOH 550 A HOH 452 3 HOH HOH 551 A HOH 453 3 HOH HOH 552 A HOH 454 3 HOH HOH 553 A HOH 455 3 HOH HOH 554 A HOH 456 3 HOH HOH 555 A HOH 457 3 HOH HOH 556 A HOH 458 3 HOH HOH 557 A HOH 459 3 HOH HOH 558 A HOH 460 3 HOH HOH 559 A HOH 461 3 HOH HOH 560 A HOH 462 3 HOH HOH 561 A HOH 463 3 HOH HOH 562 A HOH 464 3 HOH HOH 563 A HOH 465 3 HOH HOH 564 A HOH 466 3 HOH HOH 565 A HOH 467 3 HOH HOH 566 A HOH 468 3 HOH HOH 567 A HOH 469 3 HOH HOH 568 A HOH 470 3 HOH HOH 569 A HOH 471 3 HOH HOH 570 A HOH 472 3 HOH HOH 571 A HOH 473 3 HOH HOH 572 A HOH 474 3 HOH HOH 573 A HOH 475 3 HOH HOH 574 A HOH 476 3 HOH HOH 575 A HOH 477 3 HOH HOH 576 A HOH 478 3 HOH HOH 577 A HOH 479 3 HOH HOH 578 A HOH 480 3 HOH HOH 579 A HOH 481 3 HOH HOH 580 A HOH 482 3 HOH HOH 581 A HOH 483 3 HOH HOH 582 A HOH 484 3 HOH HOH 583 A HOH 485 3 HOH HOH 584 A HOH 486 3 HOH HOH 585 A HOH 487 3 HOH HOH 586 A HOH 488 3 HOH HOH 587 A HOH 489 3 HOH HOH 588 A HOH 490 3 HOH HOH 589 A HOH 491 3 HOH HOH 590 A HOH 492 3 HOH HOH 591 A HOH 493 3 HOH HOH 592 A HOH 494 3 HOH HOH 593 A HOH 495 3 HOH HOH 594 A HOH 496 3 HOH HOH 595 A HOH 497 3 HOH HOH 596 A HOH 498 3 HOH HOH 597 A HOH 499 3 HOH HOH 598 A HOH 500 3 HOH HOH 599 A HOH 501 3 HOH HOH 600 A HOH 502 3 HOH HOH 601 A HOH 503 3 HOH HOH 602 A HOH 504 3 HOH HOH 603 A HOH 505 3 HOH HOH 604 A HOH 506 3 HOH HOH 605 A HOH 507 3 HOH HOH 606 A HOH 508 3 HOH HOH 607 A HOH 509 3 HOH HOH 608 A HOH 510 3 HOH HOH 609 A HOH 511 3 HOH HOH 610 A HOH 512 3 HOH HOH 611 A HOH 513 3 HOH HOH 612 A HOH 514 3 HOH HOH 613 A HOH 515 3 HOH HOH 614 A HOH 516 3 HOH HOH 615 A HOH 517 3 HOH HOH 616 A HOH 518 3 HOH HOH 617 A HOH 519 3 HOH HOH 618 A HOH 520 3 HOH HOH 619 A HOH 521 3 HOH HOH 620 A HOH 522 3 HOH HOH 621 A HOH 523 3 HOH HOH 622 A HOH 524 3 HOH HOH 623 A HOH 525 3 HOH HOH 624 A HOH 526 3 HOH HOH 625 A HOH 527 3 HOH HOH 626 A HOH 528 3 HOH HOH 627 A HOH 529 3 HOH HOH 628 A HOH 530 3 HOH HOH 629 A HOH 531 3 HOH HOH 630 A HOH 532 3 HOH HOH 631 A HOH 533 3 HOH HOH 632 A HOH 534 3 HOH HOH 633 A HOH 535 3 HOH HOH 634 A HOH 536 3 HOH HOH 635 A HOH 537 3 HOH HOH 636 A HOH 538 3 HOH HOH 637 A HOH 539 3 HOH HOH 638 A HOH 540 3 HOH HOH 639 A HOH 541 3 HOH HOH 640 A HOH 542 3 HOH HOH 641 A HOH 543 3 HOH HOH 642 A HOH 544 3 HOH HOH 643 A HOH 545 3 HOH HOH 644 A HOH 546 3 HOH HOH 645 A HOH 547 3 HOH HOH 646 A HOH 548 3 HOH HOH 647 A HOH 549 3 HOH HOH 648 A HOH 550 3 HOH HOH 649 A HOH 551 3 HOH HOH 650 A HOH 552 3 HOH HOH 651 A HOH 553 3 HOH HOH 652 A HOH 554 3 HOH HOH 653 A HOH 555 3 HOH HOH 654 A HOH 556 3 HOH HOH 655 A HOH 557 3 HOH HOH 656 A HOH 558 3 HOH HOH 657 A HOH 559 3 HOH HOH 658 A HOH 560 3 HOH HOH 659 A HOH 561 3 HOH HOH 660 A HOH 562 3 HOH HOH 661 A HOH 563 3 HOH HOH 662 A HOH 564 3 HOH HOH 663 A HOH 565 3 HOH HOH 664 A HOH 566 3 HOH HOH 665 A HOH 567 3 HOH HOH 666 A HOH 568 3 HOH HOH 667 A HOH 569 3 HOH HOH 668 A HOH 570 3 HOH HOH 669 A HOH 571 3 HOH HOH 670 A HOH 572 3 HOH HOH 671 A HOH 573 3 HOH HOH 672 A HOH 574 3 HOH HOH 673 A HOH 575 3 HOH HOH 674 A HOH 576 3 HOH HOH 675 A HOH 577 3 HOH HOH 676 A HOH 578 3 HOH HOH 677 A HOH 579 3 HOH HOH 678 A HOH 580 3 HOH HOH 679 A HOH 581 3 HOH HOH 680 A HOH 582 3 HOH HOH 681 A HOH 583 3 HOH HOH 682 A HOH 584 3 HOH HOH 683 A HOH 585 3 HOH HOH 684 A HOH 586 3 HOH HOH 685 A HOH 587 3 HOH HOH 686 A HOH 588 3 HOH HOH 687 A HOH 589 3 HOH HOH 688 A HOH 590 3 HOH HOH 689 A HOH 591 3 HOH HOH 690 A HOH 592 3 HOH HOH 691 A HOH 593 3 HOH HOH 692 A HOH 594 3 HOH HOH 693 A HOH 595 3 HOH HOH 694 A HOH 596 3 HOH HOH 695 A HOH 597 3 HOH HOH 696 A HOH 598 3 HOH HOH 697 A HOH 599 3 HOH HOH 698 A HOH 600 3 HOH HOH 699 A HOH 601 3 HOH HOH 700 A HOH 602 3 HOH HOH 701 A HOH 603 3 HOH HOH 702 A HOH 604 3 HOH HOH 703 A HOH 605 3 HOH HOH 704 A HOH 606 3 HOH HOH 705 A HOH 607 3 HOH HOH 706 A HOH 608 3 HOH HOH 707 A HOH 609 3 HOH HOH 708 A HOH 610 3 HOH HOH 709 A HOH 611 3 HOH HOH 710 A HOH 612 3 HOH HOH 711 A HOH 613 3 HOH HOH 712 A HOH 614 3 HOH HOH 713 A HOH 615 3 HOH HOH 714 A HOH 616 3 HOH HOH 715 A HOH 617 3 HOH HOH 716 A HOH 618 3 HOH HOH 717 A HOH 619 3 HOH HOH 718 A HOH 620 3 HOH HOH 719 A HOH 621 3 HOH HOH 720 A HOH 622 3 HOH HOH 721 A HOH 623 3 HOH HOH 722 A HOH 624 3 HOH HOH 723 A HOH 625 3 HOH HOH 724 A HOH 626 3 HOH HOH 725 A HOH 627 3 HOH HOH 726 A HOH 628 3 HOH HOH 727 A HOH 629 3 HOH HOH 728 A HOH 630 3 HOH HOH 729 A HOH 631 3 HOH HOH 730 A HOH 632 3 HOH HOH 731 A HOH 633 3 HOH HOH 732 A HOH 634 3 HOH HOH 733 A HOH 635 3 HOH HOH 734 A HOH 636 3 HOH HOH 735 A HOH 637 3 HOH HOH 736 A HOH 638 3 HOH HOH 737 A HOH 639 3 HOH HOH 738 A HOH 640 3 HOH HOH 739 A HOH 641 3 HOH HOH 740 A HOH 642 3 HOH HOH 741 A HOH 643 3 HOH HOH 742 A HOH 644 3 HOH HOH 743 A HOH 645 3 HOH HOH 744 A HOH 646 3 HOH HOH 745 A HOH 647 3 HOH HOH 746 A HOH 648 3 HOH HOH 747 A HOH 649 3 HOH HOH 748 A HOH 650 3 HOH HOH 749 A HOH 651 3 HOH HOH 750 A HOH 652 3 HOH HOH 751 A HOH 653 3 HOH HOH 752 A HOH 654 3 HOH HOH 753 A HOH 655 3 HOH HOH 754 A HOH 656 3 HOH HOH 755 A HOH 657 3 HOH HOH 756 A HOH 658 3 HOH HOH 757 A HOH 659 3 HOH HOH 758 A HOH 660 3 HOH HOH 759 A HOH 661 3 HOH HOH 760 A HOH 662 3 HOH HOH 761 A HOH 663 3 HOH HOH 762 A HOH 664 3 HOH HOH 763 A HOH 665 3 HOH HOH 764 A HOH 666 3 HOH HOH 765 A HOH 667 3 HOH HOH 766 A HOH 668 3 HOH HOH 767 A HOH 669 3 HOH HOH 768 A HOH 670 3 HOH HOH 769 A HOH 671 3 HOH HOH 770 A n 1 0 A n 2 23 A n 3 24 A n 4 25 A n 5 26 A n 6 27 A n 7 28 A n 8 29 A ASP 30 n 9 ASP 30 A THR 31 n 10 THR 31 A ILE 32 n 11 ILE 32 A LYS 33 n 12 LYS 33 A VAL 34 n 13 VAL 34 A LEU 35 n 14 LEU 35 A ALA 36 n 15 ALA 36 A ILE 37 n 16 ILE 37 A GLY 38 n 17 GLY 38 A ASN 39 n 18 ASN 39 A SER 40 n 19 SER 40 A PHE 41 n 20 PHE 41 A SER 42 n 21 SER 42 A GLN 43 n 22 GLN 43 A ASP 44 n 23 ASP 44 A ALA 45 n 24 ALA 45 A VAL 46 n 25 VAL 46 A GLU 47 n 26 GLU 47 A GLN 48 n 27 GLN 48 A TYR 49 n 28 TYR 49 A LEU 50 n 29 LEU 50 A HIS 51 n 30 HIS 51 A GLU 52 n 31 GLU 52 A LEU 53 n 32 LEU 53 A GLY 54 n 33 GLY 54 A GLU 55 n 34 GLU 55 A ALA 56 n 35 ALA 56 A GLU 57 n 36 GLU 57 A GLY 58 n 37 GLY 58 A ILE 59 n 38 ILE 59 A THR 60 n 39 THR 60 A MSE 61 n 40 MSE 61 A ILE 62 n 41 ILE 62 A ILE 63 n 42 ILE 63 A GLY 64 n 43 GLY 64 A ASN 65 n 44 ASN 65 A MSE 66 n 45 MSE 66 A PHE 67 n 46 PHE 67 A ILE 68 n 47 ILE 68 A GLY 69 n 48 GLY 69 A GLY 70 n 49 GLY 70 A CYS 71 n 50 CYS 71 A SER 72 n 51 SER 72 A LEU 73 n 52 LEU 73 A GLU 74 n 53 GLU 74 A ARG 75 n 54 ARG 75 A HIS 76 n 55 HIS 76 A VAL 77 n 56 VAL 77 A GLN 78 n 57 GLN 78 A ASN 79 n 58 ASN 79 A ILE 80 n 59 ILE 80 A ARG 81 n 60 ARG 81 A ASN 82 n 61 ASN 82 A ASN 83 n 62 ASN 83 A ALA 84 n 63 ALA 84 A PRO 85 n 64 PRO 85 A ALA 86 n 65 ALA 86 A TYR 87 n 66 TYR 87 A ALA 88 n 67 ALA 88 A TYR 89 n 68 TYR 89 A ARG 90 n 69 ARG 90 A LYS 91 n 70 LYS 91 A VAL 92 n 71 VAL 92 A GLU 93 n 72 GLU 93 A LYS 94 n 73 LYS 94 A ASP 95 n 74 ASP 95 A GLY 96 n 75 GLY 96 A GLU 97 n 76 GLU 97 A LYS 98 n 77 LYS 98 A THR 99 n 78 THR 99 A GLU 100 n 79 GLU 100 A THR 101 n 80 THR 101 A ARG 102 n 81 ARG 102 A SER 103 n 82 SER 103 A MSE 104 n 83 MSE 104 A THR 105 n 84 THR 105 A ILE 106 n 85 ILE 106 A GLU 107 n 86 GLU 107 A LYS 108 n 87 LYS 108 A ALA 109 n 88 ALA 109 A LEU 110 n 89 LEU 110 A ALA 111 n 90 ALA 111 A ASP 112 n 91 ASP 112 A GLU 113 n 92 GLU 113 A LYS 114 n 93 LYS 114 A TRP 115 n 94 TRP 115 A ASP 116 n 95 ASP 116 A TYR 117 n 96 TYR 117 A ILE 118 n 97 ILE 118 A SER 119 n 98 SER 119 A VAL 120 n 99 VAL 120 A GLN 121 n 100 GLN 121 A GLN 122 n 101 GLN 122 A ALA 123 n 102 ALA 123 A SER 124 n 103 SER 124 A PRO 125 n 104 PRO 125 A LEU 126 n 105 LEU 126 A SER 127 n 106 SER 127 A GLY 128 n 107 GLY 128 A ILE 129 n 108 ILE 129 A TYR 130 n 109 TYR 130 A ASP 131 n 110 ASP 131 A SER 132 n 111 SER 132 A TYR 133 n 112 TYR 133 A LYS 134 n 113 LYS 134 A ALA 135 n 114 ALA 135 A SER 136 n 115 SER 136 A LEU 137 n 116 LEU 137 A PRO 138 n 117 PRO 138 A GLU 139 n 118 GLU 139 A LEU 140 n 119 LEU 140 A VAL 141 n 120 VAL 141 A ASN 142 n 121 ASN 142 A TYR 143 n 122 TYR 143 A ILE 144 n 123 ILE 144 A ARG 145 n 124 ARG 145 A GLU 146 n 125 GLU 146 A ARG 147 n 126 ARG 147 A ILE 148 n 127 ILE 148 A GLY 149 n 128 GLY 149 A LYS 150 n 129 LYS 150 A GLU 151 n 130 GLU 151 A THR 152 n 131 THR 152 A VAL 153 n 132 VAL 153 A LEU 154 n 133 LEU 154 A MSE 155 n 134 MSE 155 A MSE 156 n 135 MSE 156 A HIS 157 n 136 HIS 157 A GLN 158 n 137 GLN 158 A THR 159 n 138 THR 159 A TRP 160 n 139 TRP 160 A ALA 161 n 140 ALA 161 A TYR 162 n 141 TYR 162 A ALA 163 n 142 ALA 163 A THR 164 n 143 THR 164 A ASN 165 n 144 ASN 165 A ALA 166 n 145 ALA 166 A ASN 167 n 146 ASN 167 A HIS 168 n 147 HIS 168 A THR 169 n 148 THR 169 A GLY 170 n 149 GLY 170 A PHE 171 n 150 PHE 171 A LYS 172 n 151 LYS 172 A ASN 173 n 152 ASN 173 A TYR 174 n 153 TYR 174 A ASP 175 n 154 ASP 175 A GLN 176 n 155 GLN 176 A ASN 177 n 156 ASN 177 A GLN 178 n 157 GLN 178 A MSE 179 n 158 MSE 179 A LYS 180 n 159 LYS 180 A MSE 181 n 160 MSE 181 A TYR 182 n 161 TYR 182 A THR 183 n 162 THR 183 A SER 184 n 163 SER 184 A ILE 185 n 164 ILE 185 A VAL 186 n 165 VAL 186 A ASP 187 n 166 ASP 187 A ALA 188 n 167 ALA 188 A VAL 189 n 168 VAL 189 A LYS 190 n 169 LYS 190 A LYS 191 n 170 LYS 191 A ALA 192 n 171 ALA 192 A ALA 193 n 172 ALA 193 A ASN 194 n 173 ASN 194 A LEU 195 n 174 LEU 195 A VAL 196 n 175 VAL 196 A GLY 197 n 176 GLY 197 A ILE 198 n 177 ILE 198 A LYS 199 n 178 LYS 199 A LYS 200 n 179 LYS 200 A ILE 201 n 180 ILE 201 A ILE 202 n 181 ILE 202 A PRO 203 n 182 PRO 203 A SER 204 n 183 SER 204 A GLY 205 n 184 GLY 205 A THR 206 n 185 THR 206 A ALA 207 n 186 ALA 207 A ILE 208 n 187 ILE 208 A GLN 209 n 188 GLN 209 A ASN 210 n 189 ASN 210 A ALA 211 n 190 ALA 211 A ARG 212 n 191 ARG 212 A THR 213 n 192 THR 213 A SER 214 n 193 SER 214 A PHE 215 n 194 PHE 215 A ILE 216 n 195 ILE 216 A GLY 217 n 196 GLY 217 A ASP 218 n 197 ASP 218 A HIS 219 n 198 HIS 219 A MSE 220 n 199 MSE 220 A ASN 221 n 200 ASN 221 A ARG 222 n 201 ARG 222 A ASP 223 n 202 ASP 223 A GLY 224 n 203 GLY 224 A TYR 225 n 204 TYR 225 A HIS 226 n 205 HIS 226 A LEU 227 n 206 LEU 227 A ASP 228 n 207 ASP 228 A LEU 229 n 208 LEU 229 A THR 230 n 209 THR 230 A ILE 231 n 210 ILE 231 A GLY 232 n 211 GLY 232 A ARG 233 n 212 ARG 233 A TYR 234 n 213 TYR 234 A THR 235 n 214 THR 235 A ALA 236 n 215 ALA 236 A ALA 237 n 216 ALA 237 A CYS 238 n 217 CYS 238 A THR 239 n 218 THR 239 A TRP 240 n 219 TRP 240 A PHE 241 n 220 PHE 241 A GLU 242 n 221 GLU 242 A ALA 243 n 222 ALA 243 A LEU 244 n 223 LEU 244 A THR 245 n 224 THR 245 A HIS 246 n 225 HIS 246 A ARG 247 n 226 ARG 247 A ASN 248 n 227 ASN 248 A VAL 249 n 228 VAL 249 A THR 250 n 229 THR 250 A GLU 251 n 230 GLU 251 A ASN 252 n 231 ASN 252 A PRO 253 n 232 PRO 253 A TYR 254 n 233 TYR 254 A SER 255 n 234 SER 255 A PRO 256 n 235 PRO 256 A GLU 257 n 236 GLU 257 A GLY 258 n 237 GLY 258 A ILE 259 n 238 ILE 259 A ASP 260 n 239 ASP 260 A PRO 261 n 240 PRO 261 A ILE 262 n 241 ILE 262 A HIS 263 n 242 HIS 263 A LYS 264 n 243 LYS 264 A LYS 265 n 244 LYS 265 A ALA 266 n 245 ALA 266 A ALA 267 n 246 ALA 267 A GLN 268 n 247 GLN 268 A MSE 269 n 248 MSE 269 A ALA 270 n 249 ALA 270 A ALA 271 n 250 ALA 271 A HIS 272 n 251 HIS 272 A ASN 273 n 252 ASN 273 A ALA 274 n 253 ALA 274 A ILE 275 n 254 ILE 275 A LEU 276 n 255 LEU 276 A TYR 277 n 256 TYR 277 A PRO 278 n 257 PRO 278 A ASP 279 n 258 ASP 279 A LYS 280 n 259 LYS 280 A VAL 281 n 260 VAL 281 A THR 282 n 261 THR 282 A GLU 283 n 262 GLU 283 A LEU 284 n 263 LEU 284 A THR 285 n 264 THR 285 A GLU 286 n 265 GLU 286 A LEU 287 n 266 LEU 287 A LYS 288 n 267 LYS 288 A n 268 289 A n 269 290 A n 270 291 A n 271 292 A 0.2786 -0.1633 -0.0088 0.6700 -0.1429 0.4405 -0.0207 -0.0001 0.0099 0.0251 -0.0013 0.0300 -0.0002 0.0104 0.0220 0.0240 -0.0093 -0.0015 0.0052 -0.0062 0.0625 refined 21.3020 28.4870 27.9910 X-RAY DIFFRACTION A 30 A 288 X-RAY DIFFRACTION 1 author_and_software_defined_assembly PISA 1 monomeric A MSE 61 SELENOMETHIONINE A MSE 40 MET A MSE 66 SELENOMETHIONINE A MSE 45 MET A MSE 104 SELENOMETHIONINE A MSE 83 MET A MSE 155 SELENOMETHIONINE A MSE 134 MET A MSE 156 SELENOMETHIONINE A MSE 135 MET A MSE 179 SELENOMETHIONINE A MSE 158 MET A MSE 181 SELENOMETHIONINE A MSE 160 MET A MSE 220 SELENOMETHIONINE A MSE 199 MET A MSE 269 SELENOMETHIONINE A MSE 248 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O THR 101 A O THR 80 A N TYR 89 A N TYR 68 A O ALA 88 A O ALA 67 A N PHE 67 A N PHE 46 A O MSE 66 A O MSE 45 A N GLY 38 A N GLY 17 A N LEU 35 A N LEU 14 A O SER 119 A O SER 98 A N ILE 118 A N ILE 97 A O MSE 155 A O MSE 134 A N MSE 156 A N MSE 135 A O ILE 202 A O ILE 181 1 A HOH 518 D HOH 1 A HOH 742 D HOH 1 A CG ASP 30 A CG ASP 9 1 Y 1 A OD1 ASP 30 A OD1 ASP 9 1 Y 1 A OD2 ASP 30 A OD2 ASP 9 1 Y 1 A CG LYS 94 A CG LYS 73 1 Y 1 A CD LYS 94 A CD LYS 73 1 Y 1 A CE LYS 94 A CE LYS 73 1 Y 1 A NZ LYS 94 A NZ LYS 73 1 Y 1 A CD LYS 114 A CD LYS 93 1 Y 1 A CE LYS 114 A CE LYS 93 1 Y 1 A NZ LYS 114 A NZ LYS 93 1 Y 1 A GLY 0 A GLY 1 1 Y 1 A ASN 23 A ASN 2 1 Y 1 A GLY 24 A GLY 3 1 Y 1 A CYS 25 A CYS 4 1 Y 1 A HIS 26 A HIS 5 1 Y 1 A ALA 27 A ALA 6 1 Y 1 A ASN 28 A ASN 7 1 Y 1 A ASN 29 A ASN 8 1 Y 1 A LYS 289 A LYS 268 1 Y 1 A ILE 290 A ILE 269 1 Y 1 A ALA 291 A ALA 270 1 Y 1 A ASP 292 A ASP 271 1 Y 1 A ASN 39 -175.75 -160.27 1 A TYR 49 71.83 -43.27 1 A ASP 223 -154.33 25.32 1 A TYR 225 -136.60 -52.20 1 A THR 230 -104.44 -83.25 73.340 16.8075 6.010 0.4300 0.0000 -0.0000 -0.3300 -0.0000 -0.1000 0.9690 0.9610 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 6. ACETATE (ACT) IONS FROM THE CRYSTALLIZATION SOLUTION ARE MODELED. 0.1762 0.1512 0.1524 1.5000 28.222 2101 41708 5.0000 99.6500 1.000 0.150 2.2490 0.0420 RANDOM 1 THROUGHOUT 0.000 MAD 0.0690 0.0690 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD WITH PHASES BABINET MODEL WITH MASK 1.5000 28.222 370 2412 8 0 2034 0.013 0.019 2263 0.001 0.020 2179 1.570 1.969 3103 0.841 3.000 5045 6.066 5.000 309 38.826 24.907 108 12.494 15.000 378 17.242 15.000 12 0.098 0.200 347 0.008 0.020 2643 0.002 0.020 523 1.505 1.691 1099 1.478 1.678 1096 2.180 3.132 1386 0.2780 0.2420 1.5390 158 2864 3022 20 99.8000 1.50 28.222 4I8I 41834 41834 0.121 1 10.800 7.100 100.000 0.945 1.500 1.540 0.8 21618 3036 0.945 1 7.100 99.900 0.744 1.540 1.580 1.0 21287 2979 0.744 1 7.100 100.000 0.645 1.580 1.630 1.2 20791 2907 0.645 1 7.200 100.000 0.561 1.630 1.680 1.3 20227 2826 0.561 1 7.200 100.000 0.441 1.680 1.730 1.7 19448 2721 0.441 1 7.100 100.000 0.354 1.730 1.790 2.2 18977 2661 0.354 1 7.100 100.000 0.284 1.790 1.860 2.7 18283 2559 0.284 1 7.100 100.000 0.255 1.860 1.940 2.9 17308 2452 0.255 1 7.100 100.000 0.189 1.940 2.020 4.0 16915 2374 0.189 1 7.100 100.000 0.149 2.020 2.120 5.0 16030 2279 0.149 1 7.000 100.000 0.137 2.120 2.240 5.4 15182 2145 0.137 1 7.100 99.900 0.120 2.240 2.370 5.9 14233 2054 0.120 1 6.900 100.000 0.091 2.370 2.540 7.9 13414 1924 0.091 1 7.000 100.000 0.082 2.540 2.740 8.9 12266 1803 0.082 1 6.800 100.000 0.069 2.740 3.000 10.0 10909 1671 0.069 1 6.500 100.000 0.055 3.000 3.350 12.3 10305 1520 0.055 1 6.800 100.000 0.056 3.350 3.870 11.8 9690 1340 0.056 1 7.200 100.000 0.045 3.870 4.740 13.6 8343 1149 0.045 1 7.300 100.000 0.046 4.740 6.710 14.6 6460 904 0.046 1 7.100 100.000 0.047 6.710 28.222 12.8 3497 530 0.047 1 6.600 98.700 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Phil Evans pre@mrc-lmb.cam.ac.uk SCALA package 3.3.20 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.7.0032 data reduction MOSFLM phasing SHELXD Crystal structure of a DUF4886 family protein (BACUNI_01406) from Bacteroides uniformis ATCC 8492 at 1.50 A resolution 1 N N 2 N N 2 N N 3 N N CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. A ASN 39 A ASN 18 HELX_P A GLU 47 A GLU 26 1 1 9 A TYR 49 A TYR 28 HELX_P A ALA 56 A ALA 35 1 2 8 A SER 72 A SER 51 HELX_P A ASN 82 A ASN 61 1 3 11 A THR 105 A THR 84 HELX_P A GLU 113 A GLU 92 1 4 9 A ALA 123 A ALA 102 HELX_P A SER 127 A SER 106 5 5 5 A ILE 129 A ILE 108 HELX_P A GLU 146 A GLU 125 1 6 18 A HIS 168 A HIS 147 HELX_P A ASP 175 A ASP 154 5 7 8 A ASN 177 A ASN 156 HELX_P A GLY 197 A GLY 176 1 8 21 A SER 204 A SER 183 HELX_P A SER 214 A SER 193 1 9 11 A THR 230 A THR 209 HELX_P A HIS 246 A HIS 225 1 10 17 A ASN 248 A ASN 227 HELX_P A ASN 252 A ASN 231 5 11 5 A ASP 260 A ASP 239 HELX_P A TYR 277 A TYR 256 1 12 18 A LEU 284 A LEU 263 HELX_P A LYS 288 A LYS 267 5 13 5 covale 1.314 both A A THR 60 A C THR 39 1_555 A MSE 61 A N MSE 40 1_555 covale 1.334 both B A THR 60 A C THR 39 1_555 A MSE 61 A N MSE 40 1_555 covale 1.329 both A A MSE 61 A C MSE 40 1_555 A ILE 62 A N ILE 41 1_555 covale 1.334 both B A MSE 61 A C MSE 40 1_555 A ILE 62 A N ILE 41 1_555 covale 1.324 both A ASN 65 A C ASN 44 1_555 A MSE 66 A N MSE 45 1_555 covale 1.333 both A MSE 66 A C MSE 45 1_555 A PHE 67 A N PHE 46 1_555 covale 1.338 both A SER 103 A C SER 82 1_555 A MSE 104 A N MSE 83 1_555 covale 1.327 both A MSE 104 A C MSE 83 1_555 A THR 105 A N THR 84 1_555 covale 1.330 both A LEU 154 A C LEU 133 1_555 A MSE 155 A N MSE 134 1_555 covale 1.329 both A MSE 155 A C MSE 134 1_555 A MSE 156 A N MSE 135 1_555 covale 1.326 both A MSE 156 A C MSE 135 1_555 A HIS 157 A N HIS 136 1_555 covale 1.330 both A GLN 178 A C GLN 157 1_555 A MSE 179 A N MSE 158 1_555 covale 1.325 both A MSE 179 A C MSE 158 1_555 A LYS 180 A N LYS 159 1_555 covale 1.325 both A LYS 180 A C LYS 159 1_555 A MSE 181 A N MSE 160 1_555 covale 1.321 both A MSE 181 A C MSE 160 1_555 A TYR 182 A N TYR 161 1_555 covale 1.330 both A HIS 219 A C HIS 198 1_555 A MSE 220 A N MSE 199 1_555 covale 1.339 both A MSE 220 A C MSE 199 1_555 A ASN 221 A N ASN 200 1_555 covale 1.333 both A GLN 268 A C GLN 247 1_555 A MSE 269 A N MSE 248 1_555 covale 1.331 both A MSE 269 A C MSE 248 1_555 A ALA 270 A N ALA 249 1_555 Structural Genomics, Unknown Function 5-stranded beta sheet flanked by 8 helices fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION A7V1G8_BACUN UNP 1 23 A7V1G8 NGCHANNDTIKVLAIGNSFSQDAVEQYLHELGEAEGITMIIGNMFIGGCSLERHVQNIRNNAPAYAYRKVEKDGEKTETR SMTIEKALADEKWDYISVQQASPLSGIYDSYKASLPELVNYIRERIGKETVLMMHQTWAYATNANHTGFKNYDQNQMKMY TSIVDAVKKAANLVGIKKIIPSGTAIQNARTSFIGDHMNRDGYHLDLTIGRYTAACTWFEALTHRNVTENPYSPEGIDPI HKKAAQMAAHNAILYPDKVTELTELKKIAD 23 292 4I8I 23 292 A7V1G8 A 1 2 271 1 expression tag GLY 0 4I8I A A7V1G8 UNP 1 7 anti-parallel anti-parallel parallel parallel parallel parallel A LYS 98 A LYS 77 A MSE 104 A MSE 83 A TYR 87 A TYR 66 A VAL 92 A VAL 71 A THR 60 A THR 39 A PHE 67 A PHE 46 A THR 31 A THR 10 A GLY 38 A GLY 17 A TYR 117 A TYR 96 A VAL 120 A VAL 99 A VAL 153 A VAL 132 A GLN 158 A GLN 137 A LYS 200 A LYS 179 A PRO 203 A PRO 182 BINDING SITE FOR RESIDUE ACT A 300 A ACT 300 Software 6 BINDING SITE FOR RESIDUE ACT A 301 A ACT 301 Software 6 A SER 40 A SER 19 6 1_555 A PHE 41 A PHE 20 6 1_555 A ALA 123 A ALA 102 6 1_555 A SER 124 A SER 103 6 1_555 A HOH 418 D HOH 6 1_555 A HOH 480 D HOH 6 1_555 A TYR 130 A TYR 109 6 1_555 A PRO 253 A PRO 232 6 7_545 A HOH 406 D HOH 6 7_545 A HOH 544 D HOH 6 7_545 A HOH 590 D HOH 6 7_545 A HOH 734 D HOH 6 1_555 23 I 2 2 2