0.015176 0.008762 0.000000 0.000000 0.017524 0.000000 0.000000 0.000000 0.003747 0.00000 0.00000 0.00000 Maehr, H. Rochel, N. Suh, N. Uskokovic, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 65.893 65.893 266.886 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C32 H54 O4 502.769 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) GEMINI non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N O N 76 S C N 77 N C N 78 R C N 79 N C N 80 N C N 81 N C N 82 N C N 83 N C N 84 N C N 85 N C N 86 N C N 87 N C N 88 R C N 89 S C N 90 N C N 91 N C N 92 R C N 93 N C N 94 N C N 95 N C N 96 N C N 97 N C N 98 N C N 99 N C N 100 N C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N C N 106 N C N 107 N O N 108 N C N 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 R C N 166 N C N 167 N O N 168 N C N 169 N S N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N O N 186 N N N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 N C N 203 N C N 204 N C N 205 N O N 206 N O N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 N C N 219 N C N 220 N O N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C Y 232 N C Y 233 N N Y 234 N C Y 235 N C Y 236 N N N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N O N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 S C N 256 N C N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C N 300 N C N 301 N C N 302 N C N 303 N N N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C N 325 N C N 326 N S N 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C Y 349 N C Y 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 R C N 399 N O N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N N Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C N 449 N O N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C N 467 N C N 468 N C N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 Z doub N 87 N sing N 88 N sing N 89 N sing N 90 E doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing Y 232 N sing Y 233 N doub Y 234 N doub N 235 N sing Y 236 N sing N 237 N sing Y 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N doub Y 341 N sing Y 342 N sing N 343 N sing Y 344 N doub N 345 N sing Y 346 N doub N 347 N sing Y 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N doub Y 414 N sing Y 415 N sing N 416 N sing Y 417 N sing Y 418 N doub N 419 N sing Y 420 N doub N 421 N sing Y 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing Y 437 N doub Y 438 N sing Y 439 N sing N 440 N sing Y 441 N doub N 442 N sing Y 443 N doub N 444 N sing Y 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N doub N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 56 3878 3888 10.1021/jm400032t 23566225 Diastereotopic and deuterium effects in gemini. 2013 10.2210/pdb4ia1/pdb pdb_00004ia1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2012-05-01 ADSC QUANTUM 4r SINGLE WAVELENGTH M x-ray 1 1.0 ID14-1 ESRF SYNCHROTRON ESRF BEAMLINE ID14-1 33916.543 Vitamin D3 receptor A Ligand binding domain (unp residues 156-453) 1 man polymer 1579.866 Nuclear receptor coactivator 2 unp residues 686-698 1 syn polymer 502.769 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) 1 syn non-polymer 18.015 water 69 nat water VDR-A, 1,25-dihydroxyvitamin D3 receptor A, Nuclear receptor subfamily 1 group I member 1-A NCoA-2, Class E basic helix-loop-helix protein 75, bHLHe75, Transcriptional intermediary factor 2, hTIF2 no no HMLSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNLLM MYQDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMS WSCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQA YIRIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS HMLSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNLLM MYQDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMS WSCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQA YIRIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS A polypeptide(L) no no KHKILHRLLQDSS KHKILHRLLQDSS B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n leopard danio,zebra danio,zebra fish sample vdra, nr1i1a, vdr 7955 Danio rerio 562 Escherichia coli DE3 plasmid pET28b 1 2.36 47.79 VAPOR DIFFUSION, SITTING DROP 6.5 Bis Tris 0.1M, lithium sulfate 1.6M and magnesium sulfate 50 mM , pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site repository Initial release Database references Data collection Database references Derived calculations 1 0 2013-04-24 1 1 2013-07-10 1 2 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-12-06 REL REL BIV 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) HOH water 9606 human Homo sapiens sample UNK 1 3 BIV BIV 501 A TIP 1 4 HOH HOH 601 A TIP 2 4 HOH HOH 602 A TIP 3 4 HOH HOH 603 A TIP 4 4 HOH HOH 604 A TIP 5 4 HOH HOH 605 A TIP 6 4 HOH HOH 606 A TIP 7 4 HOH HOH 607 A TIP 8 4 HOH HOH 608 A TIP 9 4 HOH HOH 609 A TIP 10 4 HOH HOH 610 A TIP 11 4 HOH HOH 611 A TIP 12 4 HOH HOH 612 A TIP 13 4 HOH HOH 613 A TIP 14 4 HOH HOH 614 A TIP 15 4 HOH HOH 615 A TIP 16 4 HOH HOH 616 A TIP 17 4 HOH HOH 617 A TIP 18 4 HOH HOH 618 A TIP 19 4 HOH HOH 619 A TIP 20 4 HOH HOH 620 A TIP 21 4 HOH HOH 621 A TIP 22 4 HOH HOH 622 A TIP 23 4 HOH HOH 623 A TIP 24 4 HOH HOH 624 A TIP 25 4 HOH HOH 625 A TIP 26 4 HOH HOH 626 A TIP 27 4 HOH HOH 627 A TIP 29 4 HOH HOH 628 A TIP 30 4 HOH HOH 629 A TIP 31 4 HOH HOH 630 A TIP 32 4 HOH HOH 631 A TIP 33 4 HOH HOH 632 A TIP 34 4 HOH HOH 633 A TIP 35 4 HOH HOH 634 A TIP 36 4 HOH HOH 635 A TIP 37 4 HOH HOH 636 A TIP 38 4 HOH HOH 637 A TIP 39 4 HOH HOH 638 A TIP 40 4 HOH HOH 639 A TIP 41 4 HOH HOH 640 A TIP 42 4 HOH HOH 641 A TIP 43 4 HOH HOH 642 A TIP 44 4 HOH HOH 643 A TIP 45 4 HOH HOH 644 A TIP 46 4 HOH HOH 645 A TIP 47 4 HOH HOH 646 A TIP 48 4 HOH HOH 647 A TIP 49 4 HOH HOH 648 A TIP 50 4 HOH HOH 649 A TIP 51 4 HOH HOH 650 A TIP 52 4 HOH HOH 651 A TIP 53 4 HOH HOH 652 A TIP 54 4 HOH HOH 653 A TIP 55 4 HOH HOH 654 A TIP 56 4 HOH HOH 655 A TIP 57 4 HOH HOH 656 A TIP 58 4 HOH HOH 657 A TIP 59 4 HOH HOH 658 A TIP 60 4 HOH HOH 659 A TIP 61 4 HOH HOH 660 A TIP 62 4 HOH HOH 661 A TIP 63 4 HOH HOH 662 A TIP 64 4 HOH HOH 663 A TIP 65 4 HOH HOH 664 A TIP 66 4 HOH HOH 665 A TIP 67 4 HOH HOH 666 A TIP 68 4 HOH HOH 667 A TIP 69 4 HOH HOH 668 A TIP 28 4 HOH HOH 701 B HIS 154 n 1 HIS 154 A MET 155 n 2 MET 155 A LEU 156 n 3 LEU 156 A SER 157 n 4 SER 157 A ASP 158 n 5 ASP 158 A GLU 159 n 6 GLU 159 A GLN 160 n 7 GLN 160 A MET 161 n 8 MET 161 A GLN 162 n 9 GLN 162 A ILE 163 n 10 ILE 163 A ILE 164 n 11 ILE 164 A ASN 165 n 12 ASN 165 A SER 166 n 13 SER 166 A LEU 167 n 14 LEU 167 A VAL 168 n 15 VAL 168 A GLU 169 n 16 GLU 169 A ALA 170 n 17 ALA 170 A HIS 171 n 18 HIS 171 A HIS 172 n 19 HIS 172 A LYS 173 n 20 LYS 173 A THR 174 n 21 THR 174 A TYR 175 n 22 TYR 175 A ASP 176 n 23 ASP 176 A ASP 177 n 24 ASP 177 A SER 178 n 25 SER 178 A TYR 179 n 26 TYR 179 A SER 180 n 27 SER 180 A ASP 181 n 28 ASP 181 A PHE 182 n 29 PHE 182 A VAL 183 n 30 VAL 183 A ARG 184 n 31 ARG 184 A PHE 185 n 32 PHE 185 A ARG 186 n 33 ARG 186 A PRO 187 n 34 PRO 187 A PRO 188 n 35 PRO 188 A VAL 189 n 36 VAL 189 A ARG 190 n 37 ARG 190 A n 38 191 A n 39 192 A n 40 193 A n 41 194 A n 42 195 A n 43 196 A n 44 197 A n 45 198 A n 46 199 A n 47 200 A n 48 201 A n 49 202 A n 50 203 A n 51 204 A n 52 205 A n 53 206 A n 54 207 A n 55 208 A n 56 209 A n 57 210 A n 58 211 A n 59 212 A n 60 213 A n 61 214 A n 62 215 A n 63 216 A n 64 217 A n 65 218 A n 66 219 A n 67 220 A n 68 221 A n 69 222 A n 70 223 A n 71 224 A n 72 225 A n 73 226 A n 74 227 A n 75 228 A n 76 229 A n 77 230 A n 78 231 A n 79 232 A n 80 233 A n 81 234 A n 82 235 A n 83 236 A n 84 237 A n 85 238 A n 86 239 A n 87 240 A n 88 241 A n 89 242 A n 90 243 A n 91 244 A n 92 245 A n 93 246 A n 94 247 A n 95 248 A n 96 249 A n 97 250 A ARG 251 n 98 ARG 251 A LEU 252 n 99 LEU 252 A SER 253 n 100 SER 253 A MET 254 n 101 MET 254 A LEU 255 n 102 LEU 255 A PRO 256 n 103 PRO 256 A HIS 257 n 104 HIS 257 A LEU 258 n 105 LEU 258 A ALA 259 n 106 ALA 259 A ASP 260 n 107 ASP 260 A LEU 261 n 108 LEU 261 A VAL 262 n 109 VAL 262 A SER 263 n 110 SER 263 A TYR 264 n 111 TYR 264 A SER 265 n 112 SER 265 A ILE 266 n 113 ILE 266 A GLN 267 n 114 GLN 267 A LYS 268 n 115 LYS 268 A VAL 269 n 116 VAL 269 A ILE 270 n 117 ILE 270 A GLY 271 n 118 GLY 271 A PHE 272 n 119 PHE 272 A ALA 273 n 120 ALA 273 A LYS 274 n 121 LYS 274 A MET 275 n 122 MET 275 A ILE 276 n 123 ILE 276 A PRO 277 n 124 PRO 277 A GLY 278 n 125 GLY 278 A PHE 279 n 126 PHE 279 A ARG 280 n 127 ARG 280 A ASP 281 n 128 ASP 281 A LEU 282 n 129 LEU 282 A THR 283 n 130 THR 283 A ALA 284 n 131 ALA 284 A GLU 285 n 132 GLU 285 A ASP 286 n 133 ASP 286 A GLN 287 n 134 GLN 287 A ILE 288 n 135 ILE 288 A ALA 289 n 136 ALA 289 A LEU 290 n 137 LEU 290 A LEU 291 n 138 LEU 291 A LYS 292 n 139 LYS 292 A SER 293 n 140 SER 293 A SER 294 n 141 SER 294 A ALA 295 n 142 ALA 295 A ILE 296 n 143 ILE 296 A GLU 297 n 144 GLU 297 A ILE 298 n 145 ILE 298 A ILE 299 n 146 ILE 299 A MET 300 n 147 MET 300 A LEU 301 n 148 LEU 301 A ARG 302 n 149 ARG 302 A SER 303 n 150 SER 303 A ASN 304 n 151 ASN 304 A GLN 305 n 152 GLN 305 A SER 306 n 153 SER 306 A PHE 307 n 154 PHE 307 A SER 308 n 155 SER 308 A LEU 309 n 156 LEU 309 A GLU 310 n 157 GLU 310 A ASP 311 n 158 ASP 311 A MET 312 n 159 MET 312 A SER 313 n 160 SER 313 A TRP 314 n 161 TRP 314 A SER 315 n 162 SER 315 A CYS 316 n 163 CYS 316 A GLY 317 n 164 GLY 317 A GLY 318 n 165 GLY 318 A PRO 319 n 166 PRO 319 A ASP 320 n 167 ASP 320 A PHE 321 n 168 PHE 321 A LYS 322 n 169 LYS 322 A TYR 323 n 170 TYR 323 A CYS 324 n 171 CYS 324 A ILE 325 n 172 ILE 325 A ASN 326 n 173 ASN 326 A ASP 327 n 174 ASP 327 A VAL 328 n 175 VAL 328 A THR 329 n 176 THR 329 A LYS 330 n 177 LYS 330 A ALA 331 n 178 ALA 331 A GLY 332 n 179 GLY 332 A HIS 333 n 180 HIS 333 A THR 334 n 181 THR 334 A LEU 335 n 182 LEU 335 A GLU 336 n 183 GLU 336 A LEU 337 n 184 LEU 337 A LEU 338 n 185 LEU 338 A GLU 339 n 186 GLU 339 A PRO 340 n 187 PRO 340 A LEU 341 n 188 LEU 341 A VAL 342 n 189 VAL 342 A LYS 343 n 190 LYS 343 A PHE 344 n 191 PHE 344 A GLN 345 n 192 GLN 345 A VAL 346 n 193 VAL 346 A GLY 347 n 194 GLY 347 A LEU 348 n 195 LEU 348 A LYS 349 n 196 LYS 349 A LYS 350 n 197 LYS 350 A LEU 351 n 198 LEU 351 A LYS 352 n 199 LYS 352 A LEU 353 n 200 LEU 353 A HIS 354 n 201 HIS 354 A GLU 355 n 202 GLU 355 A GLU 356 n 203 GLU 356 A GLU 357 n 204 GLU 357 A HIS 358 n 205 HIS 358 A VAL 359 n 206 VAL 359 A LEU 360 n 207 LEU 360 A LEU 361 n 208 LEU 361 A MET 362 n 209 MET 362 A ALA 363 n 210 ALA 363 A ILE 364 n 211 ILE 364 A CYS 365 n 212 CYS 365 A LEU 366 n 213 LEU 366 A LEU 367 n 214 LEU 367 A SER 368 n 215 SER 368 A PRO 369 n 216 PRO 369 A ASP 370 n 217 ASP 370 A ARG 371 n 218 ARG 371 A PRO 372 n 219 PRO 372 A GLY 373 n 220 GLY 373 A VAL 374 n 221 VAL 374 A GLN 375 n 222 GLN 375 A ASP 376 n 223 ASP 376 A HIS 377 n 224 HIS 377 A VAL 378 n 225 VAL 378 A ARG 379 n 226 ARG 379 A ILE 380 n 227 ILE 380 A GLU 381 n 228 GLU 381 A ALA 382 n 229 ALA 382 A LEU 383 n 230 LEU 383 A GLN 384 n 231 GLN 384 A ASP 385 n 232 ASP 385 A ARG 386 n 233 ARG 386 A LEU 387 n 234 LEU 387 A CYS 388 n 235 CYS 388 A ASP 389 n 236 ASP 389 A VAL 390 n 237 VAL 390 A LEU 391 n 238 LEU 391 A GLN 392 n 239 GLN 392 A ALA 393 n 240 ALA 393 A TYR 394 n 241 TYR 394 A ILE 395 n 242 ILE 395 A ARG 396 n 243 ARG 396 A ILE 397 n 244 ILE 397 A GLN 398 n 245 GLN 398 A HIS 399 n 246 HIS 399 A PRO 400 n 247 PRO 400 A GLY 401 n 248 GLY 401 A GLY 402 n 249 GLY 402 A ARG 403 n 250 ARG 403 A LEU 404 n 251 LEU 404 A LEU 405 n 252 LEU 405 A TYR 406 n 253 TYR 406 A ALA 407 n 254 ALA 407 A LYS 408 n 255 LYS 408 A MET 409 n 256 MET 409 A ILE 410 n 257 ILE 410 A GLN 411 n 258 GLN 411 A LYS 412 n 259 LYS 412 A LEU 413 n 260 LEU 413 A ALA 414 n 261 ALA 414 A ASP 415 n 262 ASP 415 A LEU 416 n 263 LEU 416 A ARG 417 n 264 ARG 417 A SER 418 n 265 SER 418 A LEU 419 n 266 LEU 419 A ASN 420 n 267 ASN 420 A GLU 421 n 268 GLU 421 A GLU 422 n 269 GLU 422 A HIS 423 n 270 HIS 423 A SER 424 n 271 SER 424 A LYS 425 n 272 LYS 425 A GLN 426 n 273 GLN 426 A TYR 427 n 274 TYR 427 A ARG 428 n 275 ARG 428 A SER 429 n 276 SER 429 A LEU 430 n 277 LEU 430 A SER 431 n 278 SER 431 A PHE 432 n 279 PHE 432 A GLN 433 n 280 GLN 433 A PRO 434 n 281 PRO 434 A GLU 435 n 282 GLU 435 A HIS 436 n 283 HIS 436 A SER 437 n 284 SER 437 A MET 438 n 285 MET 438 A GLN 439 n 286 GLN 439 A LEU 440 n 287 LEU 440 A THR 441 n 288 THR 441 A PRO 442 n 289 PRO 442 A LEU 443 n 290 LEU 443 A VAL 444 n 291 VAL 444 A LEU 445 n 292 LEU 445 A GLU 446 n 293 GLU 446 A VAL 447 n 294 VAL 447 A PHE 448 n 295 PHE 448 A GLY 449 n 296 GLY 449 A SER 450 n 297 SER 450 A ALA 451 n 298 GLU 451 A ALA 452 n 299 VAL 452 A n 300 453 A GLY 687 n 1 LYS 687 B HIS 688 n 2 HIS 688 B LYS 689 n 3 LYS 689 B ILE 690 n 4 ILE 690 B LEU 691 n 5 LEU 691 B HIS 692 n 6 HIS 692 B ARG 693 n 7 ARG 693 B LEU 694 n 8 LEU 694 B LEU 695 n 9 LEU 695 B ALA 696 n 10 GLN 696 B n 11 697 B n 12 698 B n 13 699 B author_and_software_defined_assembly PISA 4 tetrameric 6300 -39 21480 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_665 -y+1,-x+1,-z+1/6 crystal symmetry operation 32.9465000000 57.0650119316 44.4810000000 A N SER 308 A N SER 155 A O SER 313 A O SER 160 A N TRP 314 A N TRP 161 A O TYR 323 A O TYR 170 1 A CG GLU 451 A CG GLU 298 1 Y 1 A CD GLU 451 A CD GLU 298 1 Y 1 A OE1 GLU 451 A OE1 GLU 298 1 Y 1 A OE2 GLU 451 A OE2 GLU 298 1 Y 1 A CG1 VAL 452 A CG1 VAL 299 1 Y 1 A CG2 VAL 452 A CG2 VAL 299 1 Y 1 B CB LYS 687 B CB LYS 1 1 Y 1 B CG LYS 687 B CG LYS 1 1 Y 1 B CD LYS 687 B CD LYS 1 1 Y 1 B CE LYS 687 B CE LYS 1 1 Y 1 B NZ LYS 687 B NZ LYS 1 1 Y 1 B CG GLN 696 B CG GLN 10 1 Y 1 B CD GLN 696 B CD GLN 10 1 Y 1 B OE1 GLN 696 B OE1 GLN 10 1 Y 1 B NE2 GLN 696 B NE2 GLN 10 1 Y 1 A C19 BIV 501 C C19 BIV 1 1 N 1 A GLU 191 A GLU 38 1 Y 1 A GLY 192 A GLY 39 1 Y 1 A PRO 193 A PRO 40 1 Y 1 A VAL 194 A VAL 41 1 Y 1 A THR 195 A THR 42 1 Y 1 A ARG 196 A ARG 43 1 Y 1 A SER 197 A SER 44 1 Y 1 A ALA 198 A ALA 45 1 Y 1 A SER 199 A SER 46 1 Y 1 A ARG 200 A ARG 47 1 Y 1 A ALA 201 A ALA 48 1 Y 1 A ALA 202 A ALA 49 1 Y 1 A SER 203 A SER 50 1 Y 1 A LEU 204 A LEU 51 1 Y 1 A HIS 205 A HIS 52 1 Y 1 A SER 206 A SER 53 1 Y 1 A LEU 207 A LEU 54 1 Y 1 A SER 208 A SER 55 1 Y 1 A ASP 209 A ASP 56 1 Y 1 A ALA 210 A ALA 57 1 Y 1 A SER 211 A SER 58 1 Y 1 A SER 212 A SER 59 1 Y 1 A ASP 213 A ASP 60 1 Y 1 A SER 214 A SER 61 1 Y 1 A PHE 215 A PHE 62 1 Y 1 A ASN 216 A ASN 63 1 Y 1 A HIS 217 A HIS 64 1 Y 1 A SER 218 A SER 65 1 Y 1 A PRO 219 A PRO 66 1 Y 1 A GLU 220 A GLU 67 1 Y 1 A SER 221 A SER 68 1 Y 1 A VAL 222 A VAL 69 1 Y 1 A ASP 223 A ASP 70 1 Y 1 A THR 224 A THR 71 1 Y 1 A LYS 225 A LYS 72 1 Y 1 A LEU 226 A LEU 73 1 Y 1 A ASN 227 A ASN 74 1 Y 1 A PHE 228 A PHE 75 1 Y 1 A SER 229 A SER 76 1 Y 1 A ASN 230 A ASN 77 1 Y 1 A LEU 231 A LEU 78 1 Y 1 A LEU 232 A LEU 79 1 Y 1 A MET 233 A MET 80 1 Y 1 A MET 234 A MET 81 1 Y 1 A TYR 235 A TYR 82 1 Y 1 A GLN 236 A GLN 83 1 Y 1 A ASP 237 A ASP 84 1 Y 1 A SER 238 A SER 85 1 Y 1 A GLY 239 A GLY 86 1 Y 1 A SER 240 A SER 87 1 Y 1 A PRO 241 A PRO 88 1 Y 1 A ASP 242 A ASP 89 1 Y 1 A SER 243 A SER 90 1 Y 1 A SER 244 A SER 91 1 Y 1 A GLU 245 A GLU 92 1 Y 1 A GLU 246 A GLU 93 1 Y 1 A ASP 247 A ASP 94 1 Y 1 A GLN 248 A GLN 95 1 Y 1 A GLN 249 A GLN 96 1 Y 1 A SER 250 A SER 97 1 Y 1 A SER 453 A SER 300 1 Y 1 B ASP 697 B ASP 11 1 Y 1 B SER 698 B SER 12 1 Y 1 B SER 699 B SER 13 1 Y 1 A LEU 252 63.25 68.14 1 A LYS 330 -78.90 20.34 1 A LEU 351 -59.45 -6.02 1 A LYS 352 35.27 54.95 1 A GLN 375 -102.92 -70.38 1 A GLU 451 -65.61 2.11 .2604 .2174 .2174 2.44 25 654 13652 12559 random 1 0 MOLECULAR REPLACEMENT Engh & Huber 2.44 25 69 2099 35 0 1995 0.006 1.14 2.44 25 4IA1 13792 13792 2 2 1 96.1 2.44 2.53 1 92.5 refinement CNS data reduction HKL-2000 data scaling HKL-2000 phasing CNS Diastereotopic and Deuterium Effects in Gemini 1 N N 2 N N 3 N N 4 N N 4 N N A SER 157 A SER 4 HELX_P A TYR 175 A TYR 22 1 1 19 A TYR 179 A TYR 26 HELX_P A PHE 185 A PHE 32 5 2 7 A MET 254 A MET 101 HELX_P A LYS 274 A LYS 121 1 3 21 A GLY 278 A GLY 125 HELX_P A LEU 282 A LEU 129 5 4 5 A THR 283 A THR 130 HELX_P A SER 303 A SER 150 1 5 21 A CYS 324 A CYS 171 HELX_P A LYS 330 A LYS 177 1 6 7 A THR 334 A THR 181 HELX_P A LEU 351 A LEU 198 1 7 18 A HIS 354 A HIS 201 HELX_P A LEU 367 A LEU 214 1 8 14 A ASP 376 A ASP 223 HELX_P A HIS 399 A HIS 246 1 9 24 A LEU 404 A LEU 251 HELX_P A PHE 432 A PHE 279 1 10 29 A GLN 433 A GLN 280 HELX_P A MET 438 A MET 285 1 11 6 A THR 441 A THR 288 HELX_P A PHE 448 A PHE 295 1 12 8 B HIS 688 B HIS 2 HELX_P B LEU 695 B LEU 9 1 13 8 TRANSCRIPTION/TRANSCRIPTION ACTIVATOR VDR-synthetic agonist complex, alpha helical sandwich, transcription regulation, DNA, RXR, phosphorylation, nucleus, TRANSCRIPTION-TRANSCRIPTION ACTIVATOR complex VDRA_DANRE UNP 1 156 Q9PTN2 LSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNLLMMY QDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWS CGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQAYI RIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS NCOA2_HUMAN UNP 2 686 Q15596 KHKILHRLLQDSS 156 453 4IA1 156 453 Q9PTN2 A 1 3 300 686 698 4IA1 687 699 Q15596 B 2 1 13 1 expression tag HIS 154 4IA1 A Q9PTN2 UNP 1 1 expression tag MET 155 4IA1 A Q9PTN2 UNP 2 3 anti-parallel anti-parallel A PHE 307 A PHE 154 A SER 308 A SER 155 A SER 313 A SER 160 A SER 315 A SER 162 A LYS 322 A LYS 169 A TYR 323 A TYR 170 BINDING SITE FOR RESIDUE BIV A 501 A BIV 501 Software 12 BINDING SITE FOR CHAIN B OF NUCLEAR RECEPTOR COACTIVATOR 2 Software 17 A TYR 175 A TYR 22 12 1_555 A TYR 179 A TYR 26 12 1_555 A SER 265 A SER 112 12 1_555 A ARG 302 A ARG 149 12 1_555 A SER 303 A SER 150 12 1_555 A SER 306 A SER 153 12 1_555 A TRP 314 A TRP 161 12 1_555 A CYS 316 A CYS 163 12 1_555 A HIS 333 A HIS 180 12 1_555 A LEU 337 A LEU 184 12 1_555 A LEU 419 A LEU 266 12 1_555 A HIS 423 A HIS 270 12 1_555 A ILE 270 A ILE 117 17 1_555 A LYS 274 A LYS 121 17 1_555 A ARG 280 A ARG 127 17 1_555 A ILE 288 A ILE 135 17 1_555 A LYS 292 A LYS 139 17 1_555 A ILE 397 A ILE 244 17 6_654 A GLN 398 A GLN 245 17 6_654 A PRO 434 A PRO 281 17 10_665 A GLU 435 A GLU 282 17 10_665 A LEU 443 A LEU 290 17 1_555 A GLU 446 A GLU 293 17 1_555 A VAL 452 A VAL 299 17 1_555 A HOH 611 D HOH 17 1_555 A HOH 620 D HOH 17 1_555 A HOH 637 D HOH 17 6_654 A HOH 649 D HOH 17 1_555 B HOH 701 E HOH 17 1_555 179 P 65 2 2