0.029189
0.003801
0.011767
0.000000
0.029418
0.009608
0.000000
0.000000
0.027044
0.000000
0.000000
0.000000
Martin, R.N.A.
McGeehan, J.E.
Kneale, G.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
104.440
108.920
97.420
34.260
34.280
41.120
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
O
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
S
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
O
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
N
306
N
O
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
Y
291
N
doub
Y
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
doub
N
296
N
sing
Y
297
N
doub
N
298
N
sing
Y
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
US
Plos One
1932-6203
9
e98365
e98365
10.1371/journal.pone.0098365
24887147
Structural and Mutagenic Analysis of the RM Controller Protein C.Esp1396I.
2014
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
65
900
905
10.1107/S0907444909020514
19690367
Structure of the restriction-modification controller protein C.Esp1396I.
2009
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
40
4158
4167
10.1093/nar/gkr1250
22210861
Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.
2012
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
40
10532
10542
10.1093/nar/gks718
22941636
The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.
2012
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
65
900
905
10.1107/S0907444909020514
19690367
Structure of the restriction-modification controller protein C.Esp1396I.
2009
10.2210/pdb4ia8/pdb
pdb_00004ia8
100
1
PIXEL
2011-10-22
DECTRIS PILATUS 2M
Si(111) double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.917285
1.0
I04-1
Diamond
0.917285
SYNCHROTRON
DIAMOND BEAMLINE I04-1
9429.078
Regulatory protein
A37W
2
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
44
nat
water
no
no
GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK
HD
GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTAISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK
HD
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
RFL1396
sample
esp1396IC
211595
Enterobacter sp.
469008
Escherichia coli
BL21(DE3)pLysS
Plasmid
pET28
1
2.28
46.13
VAPOR DIFFUSION, HANGING DROP
4.5
0.2 M lithium sulfate, 0.1 M sodium acetate, 50 % v/v PEG 400, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-12-11
1
1
2014-06-18
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
S52A Mutant Free Protein
R46A Mutant Free Protein
R46A Mutant Free Protein
Native Free Protein
R35A Mutant Free Protein
DNA Bound Tetramer
DNA Bound Dimer (OL)
DNA Bound Dimer (OM
Native Free Protein (Triclinic)
T36A Mutant Free Protein
Y37F Mutant Free Protein
Dimer and 19bp DNA co-crystal
RCSB
Y
RCSB
2012-12-06
REL
REL
SO4
SULFATE ION
HOH
water
3G5G
pdb entry 3G5G
PDB
experimental model
SO4
1
2
SO4
SO4
101
B
HOH
3
3
HOH
HOH
101
A
HOH
5
3
HOH
HOH
102
A
HOH
6
3
HOH
HOH
103
A
HOH
8
3
HOH
HOH
104
A
HOH
9
3
HOH
HOH
105
A
HOH
13
3
HOH
HOH
106
A
HOH
14
3
HOH
HOH
107
A
HOH
17
3
HOH
HOH
108
A
HOH
18
3
HOH
HOH
109
A
HOH
19
3
HOH
HOH
110
A
HOH
20
3
HOH
HOH
111
A
HOH
25
3
HOH
HOH
112
A
HOH
27
3
HOH
HOH
113
A
HOH
29
3
HOH
HOH
114
A
HOH
31
3
HOH
HOH
115
A
HOH
33
3
HOH
HOH
116
A
HOH
35
3
HOH
HOH
117
A
HOH
37
3
HOH
HOH
118
A
HOH
40
3
HOH
HOH
119
A
HOH
43
3
HOH
HOH
120
A
HOH
1
3
HOH
HOH
201
B
HOH
2
3
HOH
HOH
202
B
HOH
4
3
HOH
HOH
203
B
HOH
7
3
HOH
HOH
204
B
HOH
10
3
HOH
HOH
205
B
HOH
11
3
HOH
HOH
206
B
HOH
12
3
HOH
HOH
207
B
HOH
15
3
HOH
HOH
208
B
HOH
16
3
HOH
HOH
209
B
HOH
21
3
HOH
HOH
210
B
HOH
22
3
HOH
HOH
211
B
HOH
23
3
HOH
HOH
212
B
HOH
24
3
HOH
HOH
213
B
HOH
26
3
HOH
HOH
214
B
HOH
28
3
HOH
HOH
215
B
HOH
30
3
HOH
HOH
216
B
HOH
32
3
HOH
HOH
217
B
HOH
34
3
HOH
HOH
218
B
HOH
36
3
HOH
HOH
219
B
HOH
38
3
HOH
HOH
220
B
HOH
39
3
HOH
HOH
221
B
HOH
41
3
HOH
HOH
222
B
HOH
42
3
HOH
HOH
223
B
HOH
44
3
HOH
HOH
224
B
4.270
4.270
31.550
31.550
Phaser MODE: MR_AUTO
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
SER
3
n
6
SER
3
A
PHE
4
n
7
PHE
4
A
LEU
5
n
8
LEU
5
A
LEU
6
n
9
LEU
6
A
SER
7
n
10
SER
7
A
LYS
8
n
11
LYS
8
A
VAL
9
n
12
VAL
9
A
SER
10
n
13
SER
10
A
PHE
11
n
14
PHE
11
A
VAL
12
n
15
VAL
12
A
ILE
13
n
16
ILE
13
A
LYS
14
n
17
LYS
14
A
LYS
15
n
18
LYS
15
A
ILE
16
n
19
ILE
16
A
ARG
17
n
20
ARG
17
A
LEU
18
n
21
LEU
18
A
GLU
19
n
22
GLU
19
A
LYS
20
n
23
LYS
20
A
GLY
21
n
24
GLY
21
A
MET
22
n
25
MET
22
A
THR
23
n
26
THR
23
A
GLN
24
n
27
GLN
24
A
GLU
25
n
28
GLU
25
A
ASP
26
n
29
ASP
26
A
LEU
27
n
30
LEU
27
A
ALA
28
n
31
ALA
28
A
TYR
29
n
32
TYR
29
A
LYS
30
n
33
LYS
30
A
SER
31
n
34
SER
31
A
ASN
32
n
35
ASN
32
A
LEU
33
n
36
LEU
33
A
ASP
34
n
37
ASP
34
A
ARG
35
n
38
ARG
35
A
THR
36
n
39
THR
36
A
ALA
37
n
40
ALA
37
A
ILE
38
n
41
ILE
38
A
SER
39
n
42
SER
39
A
GLY
40
n
43
GLY
40
A
ILE
41
n
44
ILE
41
A
GLU
42
n
45
GLU
42
A
ARG
43
n
46
ARG
43
A
ASN
44
n
47
ASN
44
A
SER
45
n
48
SER
45
A
ARG
46
n
49
ARG
46
A
ASN
47
n
50
ASN
47
A
LEU
48
n
51
LEU
48
A
THR
49
n
52
THR
49
A
ILE
50
n
53
ILE
50
A
LYS
51
n
54
LYS
51
A
SER
52
n
55
SER
52
A
LEU
53
n
56
LEU
53
A
GLU
54
n
57
GLU
54
A
LEU
55
n
58
LEU
55
A
ILE
56
n
59
ILE
56
A
MET
57
n
60
MET
57
A
LYS
58
n
61
LYS
58
A
GLY
59
n
62
GLY
59
A
LEU
60
n
63
LEU
60
A
GLU
61
n
64
GLU
61
A
VAL
62
n
65
VAL
62
A
SER
63
n
66
SER
63
A
ASP
64
n
67
ASP
64
A
VAL
65
n
68
VAL
65
A
VAL
66
n
69
VAL
66
A
PHE
67
n
70
PHE
67
A
PHE
68
n
71
PHE
68
A
GLU
69
n
72
GLU
69
A
MET
70
n
73
MET
70
A
LEU
71
n
74
LEU
71
A
ILE
72
n
75
ILE
72
A
LYS
73
n
76
LYS
73
A
GLU
74
n
77
GLU
74
A
ILE
75
n
78
ILE
75
A
LEU
76
n
79
LEU
76
A
LYS
77
n
80
LYS
77
A
HIS
78
n
81
HIS
78
A
ASP
79
n
82
ASP
79
A
n
1
-2
B
n
2
-1
B
n
3
0
B
n
4
1
B
n
5
2
B
SER
3
n
6
SER
3
B
PHE
4
n
7
PHE
4
B
LEU
5
n
8
LEU
5
B
LEU
6
n
9
LEU
6
B
SER
7
n
10
SER
7
B
LYS
8
n
11
LYS
8
B
VAL
9
n
12
VAL
9
B
SER
10
n
13
SER
10
B
PHE
11
n
14
PHE
11
B
VAL
12
n
15
VAL
12
B
ILE
13
n
16
ILE
13
B
LYS
14
n
17
LYS
14
B
LYS
15
n
18
LYS
15
B
ILE
16
n
19
ILE
16
B
ARG
17
n
20
ARG
17
B
LEU
18
n
21
LEU
18
B
GLU
19
n
22
GLU
19
B
LYS
20
n
23
LYS
20
B
GLY
21
n
24
GLY
21
B
MET
22
n
25
MET
22
B
THR
23
n
26
THR
23
B
GLN
24
n
27
GLN
24
B
GLU
25
n
28
GLU
25
B
ASP
26
n
29
ASP
26
B
LEU
27
n
30
LEU
27
B
ALA
28
n
31
ALA
28
B
TYR
29
n
32
TYR
29
B
LYS
30
n
33
LYS
30
B
SER
31
n
34
SER
31
B
ASN
32
n
35
ASN
32
B
LEU
33
n
36
LEU
33
B
ASP
34
n
37
ASP
34
B
ARG
35
n
38
ARG
35
B
THR
36
n
39
THR
36
B
ALA
37
n
40
ALA
37
B
ILE
38
n
41
ILE
38
B
SER
39
n
42
SER
39
B
GLY
40
n
43
GLY
40
B
ILE
41
n
44
ILE
41
B
GLU
42
n
45
GLU
42
B
ARG
43
n
46
ARG
43
B
ASN
44
n
47
ASN
44
B
SER
45
n
48
SER
45
B
ARG
46
n
49
ARG
46
B
ASN
47
n
50
ASN
47
B
LEU
48
n
51
LEU
48
B
THR
49
n
52
THR
49
B
ILE
50
n
53
ILE
50
B
LYS
51
n
54
LYS
51
B
SER
52
n
55
SER
52
B
LEU
53
n
56
LEU
53
B
GLU
54
n
57
GLU
54
B
LEU
55
n
58
LEU
55
B
ILE
56
n
59
ILE
56
B
MET
57
n
60
MET
57
B
LYS
58
n
61
LYS
58
B
GLY
59
n
62
GLY
59
B
LEU
60
n
63
LEU
60
B
GLU
61
n
64
GLU
61
B
VAL
62
n
65
VAL
62
B
SER
63
n
66
SER
63
B
ASP
64
n
67
ASP
64
B
VAL
65
n
68
VAL
65
B
VAL
66
n
69
VAL
66
B
PHE
67
n
70
PHE
67
B
PHE
68
n
71
PHE
68
B
GLU
69
n
72
GLU
69
B
MET
70
n
73
MET
70
B
LEU
71
n
74
LEU
71
B
ILE
72
n
75
ILE
72
B
LYS
73
n
76
LYS
73
B
GLU
74
n
77
GLU
74
B
ILE
75
n
78
ILE
75
B
LEU
76
n
79
LEU
76
B
LYS
77
n
80
LYS
77
B
HIS
78
n
81
HIS
78
B
ASP
79
n
82
ASP
79
B
1.6770
1.1874
1.4791
2.2313
1.8303
2.1654
-0.0364
0.0428
0.0934
0.0326
-0.0229
0.0993
-0.0581
-0.0397
0.0536
0.1263
0.0230
0.0238
0.1290
0.0319
0.1152
refined
11.4798
3.8852
28.8809
X-RAY DIFFRACTION
A
3
A
79
X-RAY DIFFRACTION
1
all
B
3
B
79
X-RAY DIFFRACTION
1
all
B
1
B
101
X-RAY DIFFRACTION
1
all
B
1
B
224
X-RAY DIFFRACTION
1
all
author_and_software_defined_assembly
PISA
2
dimeric
2150
-28
8240
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
GLY
-2
A
GLY
1
1
Y
1
A
SER
-1
A
SER
2
1
Y
1
A
HIS
0
A
HIS
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
GLU
2
A
GLU
5
1
Y
1
B
GLY
-2
B
GLY
1
1
Y
1
B
SER
-1
B
SER
2
1
Y
1
B
HIS
0
B
HIS
3
1
Y
1
B
MET
1
B
MET
4
1
Y
1
B
GLU
2
B
GLU
5
1
Y
1
A
ASN
44
-162.27
116.40
1
B
ASN
47
-66.12
-179.32
1
B
ASN
47
-69.14
-177.33
80.260
29.4732
9.820
0.2202
0.1747
0.1769
1.8500
31.550
676
19685
12775
5.2900
89.6500
1.000
0.170
0.8850
0.1400
1
5.630
MOLECULAR REPLACEMENT
18.9900
0.9000
1.1100
pdb entry 3G5G
ML
FLAT BULK SOLVENT MODEL
1.8500
31.550
44
1293
5
0
1244
0.018
1298
1.732
1744
0.127
210
0.008
214
15.347
524
0.1760
0.1182
1.9929
152
2489
2641
5
92.0000
0.1946
0.1277
2.1934
139
2463
2602
5
91.0000
0.2108
0.1592
2.5107
149
2292
2441
5
86.0000
0.2314
0.1964
3.1628
115
2489
2604
5
91.0000
0.2354
0.1903
32.3180
121
2366
2487
5
87.0000
1.850
31.550
4IA8
19685
13243
0.119
1
5.800
1.900
75.000
0.011
1.850
1.890
1.500
2927
733
1
1.900
79.100
0.011
9.060
31.550
14.000
473
115
1
2.100
95.800
data reduction
Andrew G.W. Leslie
andrew@mrc-lmb.cam.ac.uk
http://www.mrc-lmb.cam.ac.uk/harry/mosflm/
MOSFLM
package
data scaling
Phil Evans
03/07/12
http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html
Aimless
program
0.1.26
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Tue Jul 10 12:42:19 2012 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.5.1
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.8_1069
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
GDA
Crystal Structure of a Y37A mutant of the Restriction-Modification Controller Protein C.Esp1396I
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
A
SER
3
A
SER
6
HELX_P
A
LYS
20
A
LYS
23
1
1
18
A
THR
23
A
THR
26
HELX_P
A
ASN
32
A
ASN
35
1
2
10
A
ASP
34
A
ASP
37
HELX_P
A
ASN
44
A
ASN
47
1
3
11
A
THR
49
A
THR
52
HELX_P
A
GLU
61
A
GLU
64
1
4
13
A
SER
63
A
SER
66
HELX_P
A
ASP
79
A
ASP
82
1
5
17
B
PHE
4
B
PHE
7
HELX_P
B
LYS
20
B
LYS
23
1
6
17
B
THR
23
B
THR
26
HELX_P
B
ASN
32
B
ASN
35
1
7
10
B
ASP
34
B
ASP
37
HELX_P
B
ARG
43
B
ARG
46
1
8
10
B
THR
49
B
THR
52
HELX_P
B
GLU
61
B
GLU
64
1
9
13
B
SER
63
B
SER
66
HELX_P
B
ASP
79
B
ASP
82
1
10
17
TRANSCRIPTION
Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, TRANSCRIPTION
Q8GGH0_9ENTR
UNP
1
1
Q8GGH0
MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD
1
79
4IA8
1
79
Q8GGH0
A
1
4
82
1
79
4IA8
1
79
Q8GGH0
B
1
4
82
1
expression tag
GLY
-2
4IA8
A
Q8GGH0
UNP
1
1
expression tag
SER
-1
4IA8
A
Q8GGH0
UNP
2
1
expression tag
HIS
0
4IA8
A
Q8GGH0
UNP
3
1
TYR
engineered mutation
ALA
37
4IA8
A
Q8GGH0
UNP
37
40
2
expression tag
GLY
-2
4IA8
B
Q8GGH0
UNP
1
2
expression tag
SER
-1
4IA8
B
Q8GGH0
UNP
2
2
expression tag
HIS
0
4IA8
B
Q8GGH0
UNP
3
2
TYR
engineered mutation
ALA
37
4IA8
B
Q8GGH0
UNP
37
40
BINDING SITE FOR RESIDUE SO4 B 101
B
SO4
101
Software
10
A
ARG
17
A
ARG
20
10
1_666
A
THR
23
A
THR
26
10
1_666
A
GLN
24
A
GLN
27
10
1_666
A
ARG
35
A
ARG
38
10
1_666
B
THR
23
B
THR
26
10
1_555
B
GLN
24
B
GLN
27
10
1_555
B
GLU
25
B
GLU
28
10
1_555
B
ARG
35
B
ARG
38
10
1_555
B
HOH
201
E
HOH
10
1_555
B
HOH
203
E
HOH
10
1_555
1
P 1