0.019523
0.000000
0.000000
0.000000
0.015223
0.000000
0.000000
0.000000
0.013730
0.00000
0.00000
0.00000
Brown, C.S.
Leung, D.W.
Xu, W.
Borek, D.M.
Otwinowski, Z.
Ramanan, P.
Stubbs, A.J.
Peterson, D.S.
Binning, J.M.
Amarasinghe, G.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
51.222
65.689
72.831
C23 H13 Cl2 N O7 S
518.323
3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-3-[(5-chlorothiophen-2-yl)carbonyl]-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O S
78.133
DIMETHYL SULFOXIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
N
3
N
O
N
4
N
C
N
5
N
O
Y
6
N
C
Y
7
N
C
N
8
N
CL
Y
9
N
C
Y
10
N
C
N
11
S
C
N
12
N
C
N
13
N
C
N
14
N
O
Y
15
N
C
Y
16
N
C
Y
17
N
C
Y
18
N
C
N
19
N
CL
Y
20
N
S
N
21
N
C
N
22
N
O
N
23
N
C
N
24
N
O
N
25
N
N
Y
26
N
C
Y
27
N
C
Y
28
N
C
Y
29
N
C
Y
30
N
C
Y
31
N
C
N
32
N
C
N
33
N
O
N
34
N
O
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
O
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
N
N
62
S
C
N
63
N
C
N
64
N
O
N
65
N
C
N
66
N
C
N
67
N
C
N
68
N
N
N
69
N
C
N
70
N
N
N
71
N
N
N
72
N
O
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
O
N
95
N
N
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
N
N
106
S
C
N
107
N
C
N
108
N
O
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
R
C
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
S
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
S
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
N
C
Y
213
N
C
Y
214
N
N
Y
215
N
C
Y
216
N
C
Y
217
N
N
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
S
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
N
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
S
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
R
C
N
380
N
O
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
N
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
C
N
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
Y
5
N
doub
Y
6
N
sing
N
7
N
sing
Y
8
N
sing
Y
9
N
doub
Y
10
N
doub
Y
11
N
sing
Y
12
N
sing
Y
13
N
sing
N
14
N
sing
Y
15
N
doub
N
16
N
sing
Y
17
N
doub
N
18
N
doub
N
19
N
sing
N
20
N
sing
Y
21
N
sing
N
22
N
sing
N
23
N
doub
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
doub
N
30
N
sing
Y
31
N
doub
Y
32
N
sing
Y
33
N
sing
N
34
N
sing
N
35
N
sing
Y
36
N
doub
Y
37
N
doub
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
Y
213
N
sing
Y
214
N
doub
Y
215
N
doub
N
216
N
sing
Y
217
N
sing
N
218
N
sing
Y
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
Y
390
N
doub
Y
391
N
sing
Y
392
N
sing
N
393
N
sing
Y
394
N
doub
Y
395
N
sing
Y
396
N
sing
N
397
N
sing
Y
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
Y
418
N
doub
Y
419
N
sing
Y
420
N
sing
N
421
N
sing
Y
422
N
doub
N
423
N
sing
Y
424
N
doub
N
425
N
sing
Y
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
426
2045
2058
10.1016/j.jmb.2014.01.010
24495995
In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity.
2014
10.2210/pdb4ibk/pdb
pdb_00004ibk
100
1
CCD
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.9791209
1.0
19-ID
APS
0.9791209
SYNCHROTRON
APS BEAMLINE 19-ID
14210.523
Polymerase cofactor VP35
unp residues 215-340
2
man
polymer
518.323
3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-3-[(5-chlorothiophen-2-yl)carbonyl]-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid
2
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
78.133
DIMETHYL SULFOXIDE
2
syn
non-polymer
18.015
water
216
nat
water
no
no
GHMGKPDISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAA
PPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
GHMGKPDISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAA
PPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ZEBOV
Mayinga-76
sample
VP35
128952
Ebola virus
469008
Escherichia coli
BL21(DE3)
plasmid
pET15b
1
2.16
42.94
VAPOR DIFFUSION, HANGING DROP
5.5
100 mM sodium citrate, pH5.5, 15% PEG3350, 10%DMSO, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Refinement description
Data collection
Refinement description
Data collection
Database references
Derived calculations
1
0
2014-03-19
1
1
2014-05-14
1
2
2017-11-15
1
3
2019-07-17
1
4
2024-02-28
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_software.classification
_software.contact_author
_software.contact_author_email
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-12-08
REL
REL
1DE
3-{(2S)-2-(7-chloro-1,3-benzodioxol-5-yl)-3-[(5-chlorothiophen-2-yl)carbonyl]-4-hydroxy-5-oxo-2,5-dihydro-1H-pyrrol-1-yl}benzoic acid
GOL
GLYCEROL
DMS
DIMETHYL SULFOXIDE
HOH
water
1DE
1
2
1DE
1DE
401
A
GOL
1
3
GOL
GOL
402
A
DMS
1
4
DMS
DMS
403
A
DMS
1
4
DMS
DMS
404
A
1DE
1
2
1DE
1DE
401
B
HOH
1
5
HOH
HOH
501
A
HOH
2
5
HOH
HOH
502
A
HOH
3
5
HOH
HOH
503
A
HOH
4
5
HOH
HOH
504
A
HOH
6
5
HOH
HOH
505
A
HOH
9
5
HOH
HOH
506
A
HOH
11
5
HOH
HOH
507
A
HOH
14
5
HOH
HOH
508
A
HOH
16
5
HOH
HOH
509
A
HOH
19
5
HOH
HOH
510
A
HOH
21
5
HOH
HOH
511
A
HOH
28
5
HOH
HOH
512
A
HOH
31
5
HOH
HOH
513
A
HOH
33
5
HOH
HOH
514
A
HOH
39
5
HOH
HOH
515
A
HOH
40
5
HOH
HOH
516
A
HOH
41
5
HOH
HOH
517
A
HOH
43
5
HOH
HOH
518
A
HOH
44
5
HOH
HOH
519
A
HOH
47
5
HOH
HOH
520
A
HOH
48
5
HOH
HOH
521
A
HOH
50
5
HOH
HOH
522
A
HOH
51
5
HOH
HOH
523
A
HOH
52
5
HOH
HOH
524
A
HOH
53
5
HOH
HOH
525
A
HOH
58
5
HOH
HOH
526
A
HOH
59
5
HOH
HOH
527
A
HOH
60
5
HOH
HOH
528
A
HOH
61
5
HOH
HOH
529
A
HOH
62
5
HOH
HOH
530
A
HOH
67
5
HOH
HOH
531
A
HOH
68
5
HOH
HOH
532
A
HOH
69
5
HOH
HOH
533
A
HOH
70
5
HOH
HOH
534
A
HOH
71
5
HOH
HOH
535
A
HOH
72
5
HOH
HOH
536
A
HOH
73
5
HOH
HOH
537
A
HOH
74
5
HOH
HOH
538
A
HOH
75
5
HOH
HOH
539
A
HOH
77
5
HOH
HOH
540
A
HOH
79
5
HOH
HOH
541
A
HOH
81
5
HOH
HOH
542
A
HOH
82
5
HOH
HOH
543
A
HOH
86
5
HOH
HOH
544
A
HOH
87
5
HOH
HOH
545
A
HOH
88
5
HOH
HOH
546
A
HOH
89
5
HOH
HOH
547
A
HOH
90
5
HOH
HOH
548
A
HOH
91
5
HOH
HOH
549
A
HOH
93
5
HOH
HOH
550
A
HOH
95
5
HOH
HOH
551
A
HOH
96
5
HOH
HOH
552
A
HOH
97
5
HOH
HOH
553
A
HOH
99
5
HOH
HOH
554
A
HOH
102
5
HOH
HOH
555
A
HOH
104
5
HOH
HOH
556
A
HOH
105
5
HOH
HOH
557
A
HOH
106
5
HOH
HOH
558
A
HOH
108
5
HOH
HOH
559
A
HOH
111
5
HOH
HOH
560
A
HOH
117
5
HOH
HOH
561
A
HOH
118
5
HOH
HOH
562
A
HOH
125
5
HOH
HOH
563
A
HOH
126
5
HOH
HOH
564
A
HOH
127
5
HOH
HOH
565
A
HOH
128
5
HOH
HOH
566
A
HOH
132
5
HOH
HOH
567
A
HOH
135
5
HOH
HOH
568
A
HOH
140
5
HOH
HOH
569
A
HOH
141
5
HOH
HOH
570
A
HOH
146
5
HOH
HOH
571
A
HOH
148
5
HOH
HOH
572
A
HOH
149
5
HOH
HOH
573
A
HOH
150
5
HOH
HOH
574
A
HOH
153
5
HOH
HOH
575
A
HOH
154
5
HOH
HOH
576
A
HOH
156
5
HOH
HOH
577
A
HOH
157
5
HOH
HOH
578
A
HOH
161
5
HOH
HOH
579
A
HOH
162
5
HOH
HOH
580
A
HOH
164
5
HOH
HOH
581
A
HOH
166
5
HOH
HOH
582
A
HOH
167
5
HOH
HOH
583
A
HOH
169
5
HOH
HOH
584
A
HOH
170
5
HOH
HOH
585
A
HOH
172
5
HOH
HOH
586
A
HOH
173
5
HOH
HOH
587
A
HOH
174
5
HOH
HOH
588
A
HOH
175
5
HOH
HOH
589
A
HOH
177
5
HOH
HOH
590
A
HOH
178
5
HOH
HOH
591
A
HOH
181
5
HOH
HOH
592
A
HOH
184
5
HOH
HOH
593
A
HOH
185
5
HOH
HOH
594
A
HOH
188
5
HOH
HOH
595
A
HOH
190
5
HOH
HOH
596
A
HOH
192
5
HOH
HOH
597
A
HOH
193
5
HOH
HOH
598
A
HOH
195
5
HOH
HOH
599
A
HOH
197
5
HOH
HOH
600
A
HOH
198
5
HOH
HOH
601
A
HOH
200
5
HOH
HOH
602
A
HOH
201
5
HOH
HOH
603
A
HOH
202
5
HOH
HOH
604
A
HOH
204
5
HOH
HOH
605
A
HOH
206
5
HOH
HOH
606
A
HOH
207
5
HOH
HOH
607
A
HOH
210
5
HOH
HOH
608
A
HOH
211
5
HOH
HOH
609
A
HOH
212
5
HOH
HOH
610
A
HOH
215
5
HOH
HOH
611
A
HOH
216
5
HOH
HOH
612
A
HOH
5
5
HOH
HOH
501
B
HOH
7
5
HOH
HOH
502
B
HOH
8
5
HOH
HOH
503
B
HOH
10
5
HOH
HOH
504
B
HOH
12
5
HOH
HOH
505
B
HOH
13
5
HOH
HOH
506
B
HOH
15
5
HOH
HOH
507
B
HOH
17
5
HOH
HOH
508
B
HOH
18
5
HOH
HOH
509
B
HOH
20
5
HOH
HOH
510
B
HOH
22
5
HOH
HOH
511
B
HOH
23
5
HOH
HOH
512
B
HOH
24
5
HOH
HOH
513
B
HOH
25
5
HOH
HOH
514
B
HOH
26
5
HOH
HOH
515
B
HOH
27
5
HOH
HOH
516
B
HOH
29
5
HOH
HOH
517
B
HOH
30
5
HOH
HOH
518
B
HOH
32
5
HOH
HOH
519
B
HOH
34
5
HOH
HOH
520
B
HOH
35
5
HOH
HOH
521
B
HOH
36
5
HOH
HOH
522
B
HOH
37
5
HOH
HOH
523
B
HOH
38
5
HOH
HOH
524
B
HOH
42
5
HOH
HOH
525
B
HOH
45
5
HOH
HOH
526
B
HOH
46
5
HOH
HOH
527
B
HOH
49
5
HOH
HOH
528
B
HOH
54
5
HOH
HOH
529
B
HOH
55
5
HOH
HOH
530
B
HOH
56
5
HOH
HOH
531
B
HOH
57
5
HOH
HOH
532
B
HOH
63
5
HOH
HOH
533
B
HOH
64
5
HOH
HOH
534
B
HOH
65
5
HOH
HOH
535
B
HOH
66
5
HOH
HOH
536
B
HOH
76
5
HOH
HOH
537
B
HOH
78
5
HOH
HOH
538
B
HOH
80
5
HOH
HOH
539
B
HOH
83
5
HOH
HOH
540
B
HOH
84
5
HOH
HOH
541
B
HOH
85
5
HOH
HOH
542
B
HOH
92
5
HOH
HOH
543
B
HOH
94
5
HOH
HOH
544
B
HOH
98
5
HOH
HOH
545
B
HOH
100
5
HOH
HOH
546
B
HOH
101
5
HOH
HOH
547
B
HOH
103
5
HOH
HOH
548
B
HOH
107
5
HOH
HOH
549
B
HOH
109
5
HOH
HOH
550
B
HOH
110
5
HOH
HOH
551
B
HOH
112
5
HOH
HOH
552
B
HOH
113
5
HOH
HOH
553
B
HOH
114
5
HOH
HOH
554
B
HOH
115
5
HOH
HOH
555
B
HOH
116
5
HOH
HOH
556
B
HOH
119
5
HOH
HOH
557
B
HOH
120
5
HOH
HOH
558
B
HOH
121
5
HOH
HOH
559
B
HOH
122
5
HOH
HOH
560
B
HOH
123
5
HOH
HOH
561
B
HOH
124
5
HOH
HOH
562
B
HOH
129
5
HOH
HOH
563
B
HOH
130
5
HOH
HOH
564
B
HOH
131
5
HOH
HOH
565
B
HOH
133
5
HOH
HOH
566
B
HOH
134
5
HOH
HOH
567
B
HOH
136
5
HOH
HOH
568
B
HOH
137
5
HOH
HOH
569
B
HOH
138
5
HOH
HOH
570
B
HOH
139
5
HOH
HOH
571
B
HOH
142
5
HOH
HOH
572
B
HOH
143
5
HOH
HOH
573
B
HOH
144
5
HOH
HOH
574
B
HOH
145
5
HOH
HOH
575
B
HOH
147
5
HOH
HOH
576
B
HOH
151
5
HOH
HOH
577
B
HOH
152
5
HOH
HOH
578
B
HOH
155
5
HOH
HOH
579
B
HOH
158
5
HOH
HOH
580
B
HOH
159
5
HOH
HOH
581
B
HOH
160
5
HOH
HOH
582
B
HOH
163
5
HOH
HOH
583
B
HOH
165
5
HOH
HOH
584
B
HOH
168
5
HOH
HOH
585
B
HOH
171
5
HOH
HOH
586
B
HOH
176
5
HOH
HOH
587
B
HOH
179
5
HOH
HOH
588
B
HOH
180
5
HOH
HOH
589
B
HOH
182
5
HOH
HOH
590
B
HOH
183
5
HOH
HOH
591
B
HOH
186
5
HOH
HOH
592
B
HOH
187
5
HOH
HOH
593
B
HOH
189
5
HOH
HOH
594
B
HOH
191
5
HOH
HOH
595
B
HOH
194
5
HOH
HOH
596
B
HOH
196
5
HOH
HOH
597
B
HOH
199
5
HOH
HOH
598
B
HOH
203
5
HOH
HOH
599
B
HOH
205
5
HOH
HOH
600
B
HOH
208
5
HOH
HOH
601
B
HOH
209
5
HOH
HOH
602
B
HOH
213
5
HOH
HOH
603
B
HOH
214
5
HOH
HOH
604
B
n
1
212
A
n
2
213
A
n
3
214
A
n
4
215
A
n
5
216
A
n
6
217
A
ASP
218
n
7
ASP
218
A
ILE
219
n
8
ILE
219
A
SER
220
n
9
SER
220
A
ALA
221
n
10
ALA
221
A
LYS
222
n
11
LYS
222
A
ASP
223
n
12
ASP
223
A
LEU
224
n
13
LEU
224
A
ARG
225
n
14
ARG
225
A
ASN
226
n
15
ASN
226
A
ILE
227
n
16
ILE
227
A
MET
228
n
17
MET
228
A
TYR
229
n
18
TYR
229
A
ASP
230
n
19
ASP
230
A
HIS
231
n
20
HIS
231
A
LEU
232
n
21
LEU
232
A
PRO
233
n
22
PRO
233
A
GLY
234
n
23
GLY
234
A
PHE
235
n
24
PHE
235
A
GLY
236
n
25
GLY
236
A
THR
237
n
26
THR
237
A
ALA
238
n
27
ALA
238
A
PHE
239
n
28
PHE
239
A
HIS
240
n
29
HIS
240
A
GLN
241
n
30
GLN
241
A
LEU
242
n
31
LEU
242
A
VAL
243
n
32
VAL
243
A
GLN
244
n
33
GLN
244
A
VAL
245
n
34
VAL
245
A
ILE
246
n
35
ILE
246
A
CYS
247
n
36
CYS
247
A
LYS
248
n
37
LYS
248
A
LEU
249
n
38
LEU
249
A
GLY
250
n
39
GLY
250
A
LYS
251
n
40
LYS
251
A
ASP
252
n
41
ASP
252
A
SER
253
n
42
SER
253
A
ASN
254
n
43
ASN
254
A
SER
255
n
44
SER
255
A
LEU
256
n
45
LEU
256
A
ASP
257
n
46
ASP
257
A
ILE
258
n
47
ILE
258
A
ILE
259
n
48
ILE
259
A
HIS
260
n
49
HIS
260
A
ALA
261
n
50
ALA
261
A
GLU
262
n
51
GLU
262
A
PHE
263
n
52
PHE
263
A
GLN
264
n
53
GLN
264
A
ALA
265
n
54
ALA
265
A
SER
266
n
55
SER
266
A
LEU
267
n
56
LEU
267
A
ALA
268
n
57
ALA
268
A
GLU
269
n
58
GLU
269
A
GLY
270
n
59
GLY
270
A
ASP
271
n
60
ASP
271
A
SER
272
n
61
SER
272
A
PRO
273
n
62
PRO
273
A
GLN
274
n
63
GLN
274
A
CYS
275
n
64
CYS
275
A
ALA
276
n
65
ALA
276
A
LEU
277
n
66
LEU
277
A
ILE
278
n
67
ILE
278
A
GLN
279
n
68
GLN
279
A
ILE
280
n
69
ILE
280
A
THR
281
n
70
THR
281
A
LYS
282
n
71
LYS
282
A
ARG
283
n
72
ARG
283
A
VAL
284
n
73
VAL
284
A
PRO
285
n
74
PRO
285
A
ILE
286
n
75
ILE
286
A
PHE
287
n
76
PHE
287
A
GLN
288
n
77
GLN
288
A
ASP
289
n
78
ASP
289
A
ALA
290
n
79
ALA
290
A
ALA
291
n
80
ALA
291
A
PRO
292
n
81
PRO
292
A
PRO
293
n
82
PRO
293
A
VAL
294
n
83
VAL
294
A
ILE
295
n
84
ILE
295
A
HIS
296
n
85
HIS
296
A
ILE
297
n
86
ILE
297
A
ARG
298
n
87
ARG
298
A
SER
299
n
88
SER
299
A
ARG
300
n
89
ARG
300
A
GLY
301
n
90
GLY
301
A
ASP
302
n
91
ASP
302
A
ILE
303
n
92
ILE
303
A
PRO
304
n
93
PRO
304
A
ARG
305
n
94
ARG
305
A
ALA
306
n
95
ALA
306
A
CYS
307
n
96
CYS
307
A
GLN
308
n
97
GLN
308
A
LYS
309
n
98
LYS
309
A
SER
310
n
99
SER
310
A
LEU
311
n
100
LEU
311
A
ARG
312
n
101
ARG
312
A
PRO
313
n
102
PRO
313
A
VAL
314
n
103
VAL
314
A
PRO
315
n
104
PRO
315
A
PRO
316
n
105
PRO
316
A
SER
317
n
106
SER
317
A
PRO
318
n
107
PRO
318
A
LYS
319
n
108
LYS
319
A
ILE
320
n
109
ILE
320
A
ASP
321
n
110
ASP
321
A
ARG
322
n
111
ARG
322
A
GLY
323
n
112
GLY
323
A
TRP
324
n
113
TRP
324
A
VAL
325
n
114
VAL
325
A
CYS
326
n
115
CYS
326
A
VAL
327
n
116
VAL
327
A
PHE
328
n
117
PHE
328
A
GLN
329
n
118
GLN
329
A
LEU
330
n
119
LEU
330
A
GLN
331
n
120
GLN
331
A
ASP
332
n
121
ASP
332
A
GLY
333
n
122
GLY
333
A
LYS
334
n
123
LYS
334
A
THR
335
n
124
THR
335
A
LEU
336
n
125
LEU
336
A
GLY
337
n
126
GLY
337
A
LEU
338
n
127
LEU
338
A
LYS
339
n
128
LYS
339
A
ILE
340
n
129
ILE
340
A
n
1
212
B
n
2
213
B
n
3
214
B
n
4
215
B
n
5
216
B
PRO
217
n
6
PRO
217
B
ASP
218
n
7
ASP
218
B
ILE
219
n
8
ILE
219
B
SER
220
n
9
SER
220
B
ALA
221
n
10
ALA
221
B
LYS
222
n
11
LYS
222
B
ASP
223
n
12
ASP
223
B
LEU
224
n
13
LEU
224
B
ARG
225
n
14
ARG
225
B
ASN
226
n
15
ASN
226
B
ILE
227
n
16
ILE
227
B
MET
228
n
17
MET
228
B
TYR
229
n
18
TYR
229
B
ASP
230
n
19
ASP
230
B
HIS
231
n
20
HIS
231
B
LEU
232
n
21
LEU
232
B
PRO
233
n
22
PRO
233
B
GLY
234
n
23
GLY
234
B
PHE
235
n
24
PHE
235
B
GLY
236
n
25
GLY
236
B
THR
237
n
26
THR
237
B
ALA
238
n
27
ALA
238
B
PHE
239
n
28
PHE
239
B
HIS
240
n
29
HIS
240
B
GLN
241
n
30
GLN
241
B
LEU
242
n
31
LEU
242
B
VAL
243
n
32
VAL
243
B
GLN
244
n
33
GLN
244
B
VAL
245
n
34
VAL
245
B
ILE
246
n
35
ILE
246
B
CYS
247
n
36
CYS
247
B
LYS
248
n
37
LYS
248
B
LEU
249
n
38
LEU
249
B
GLY
250
n
39
GLY
250
B
LYS
251
n
40
LYS
251
B
ASP
252
n
41
ASP
252
B
SER
253
n
42
SER
253
B
ASN
254
n
43
ASN
254
B
SER
255
n
44
SER
255
B
LEU
256
n
45
LEU
256
B
ASP
257
n
46
ASP
257
B
ILE
258
n
47
ILE
258
B
ILE
259
n
48
ILE
259
B
HIS
260
n
49
HIS
260
B
ALA
261
n
50
ALA
261
B
GLU
262
n
51
GLU
262
B
PHE
263
n
52
PHE
263
B
GLN
264
n
53
GLN
264
B
ALA
265
n
54
ALA
265
B
SER
266
n
55
SER
266
B
LEU
267
n
56
LEU
267
B
ALA
268
n
57
ALA
268
B
GLU
269
n
58
GLU
269
B
GLY
270
n
59
GLY
270
B
ASP
271
n
60
ASP
271
B
SER
272
n
61
SER
272
B
PRO
273
n
62
PRO
273
B
GLN
274
n
63
GLN
274
B
CYS
275
n
64
CYS
275
B
ALA
276
n
65
ALA
276
B
LEU
277
n
66
LEU
277
B
ILE
278
n
67
ILE
278
B
GLN
279
n
68
GLN
279
B
ILE
280
n
69
ILE
280
B
THR
281
n
70
THR
281
B
LYS
282
n
71
LYS
282
B
ARG
283
n
72
ARG
283
B
VAL
284
n
73
VAL
284
B
PRO
285
n
74
PRO
285
B
ILE
286
n
75
ILE
286
B
PHE
287
n
76
PHE
287
B
GLN
288
n
77
GLN
288
B
ASP
289
n
78
ASP
289
B
ALA
290
n
79
ALA
290
B
ALA
291
n
80
ALA
291
B
PRO
292
n
81
PRO
292
B
PRO
293
n
82
PRO
293
B
VAL
294
n
83
VAL
294
B
ILE
295
n
84
ILE
295
B
HIS
296
n
85
HIS
296
B
ILE
297
n
86
ILE
297
B
ARG
298
n
87
ARG
298
B
SER
299
n
88
SER
299
B
ARG
300
n
89
ARG
300
B
GLY
301
n
90
GLY
301
B
ASP
302
n
91
ASP
302
B
ILE
303
n
92
ILE
303
B
PRO
304
n
93
PRO
304
B
ARG
305
n
94
ARG
305
B
ALA
306
n
95
ALA
306
B
CYS
307
n
96
CYS
307
B
GLN
308
n
97
GLN
308
B
LYS
309
n
98
LYS
309
B
SER
310
n
99
SER
310
B
LEU
311
n
100
LEU
311
B
ARG
312
n
101
ARG
312
B
PRO
313
n
102
PRO
313
B
VAL
314
n
103
VAL
314
B
PRO
315
n
104
PRO
315
B
PRO
316
n
105
PRO
316
B
SER
317
n
106
SER
317
B
PRO
318
n
107
PRO
318
B
LYS
319
n
108
LYS
319
B
ILE
320
n
109
ILE
320
B
ASP
321
n
110
ASP
321
B
ARG
322
n
111
ARG
322
B
GLY
323
n
112
GLY
323
B
TRP
324
n
113
TRP
324
B
VAL
325
n
114
VAL
325
B
CYS
326
n
115
CYS
326
B
VAL
327
n
116
VAL
327
B
PHE
328
n
117
PHE
328
B
GLN
329
n
118
GLN
329
B
LEU
330
n
119
LEU
330
B
GLN
331
n
120
GLN
331
B
ASP
332
n
121
ASP
332
B
GLY
333
n
122
GLY
333
B
LYS
334
n
123
LYS
334
B
THR
335
n
124
THR
335
B
LEU
336
n
125
LEU
336
B
GLY
337
n
126
GLY
337
B
LEU
338
n
127
LEU
338
B
LYS
339
n
128
LYS
339
B
ILE
340
n
129
ILE
340
B
4.8727
1.5488
-1.0283
1.4287
0.2441
1.6900
-0.0537
0.5072
-0.5019
-0.1755
0.0544
0.0951
0.3115
-0.3302
0.0952
0.1181
-0.0167
-0.0140
0.1230
-0.0343
0.1753
refined
2.3073
22.3908
-11.9209
X-RAY DIFFRACTION
3.5519
-0.7375
-1.1052
0.1813
0.1089
2.1558
-0.2586
-0.0602
-0.4672
0.0413
0.1812
0.0559
0.1093
-0.0595
0.0701
0.0983
0.0105
0.0098
0.0605
-0.0069
0.0838
refined
6.1406
25.8493
-4.1299
X-RAY DIFFRACTION
1.8106
0.1733
-1.1129
0.1575
-0.1259
2.3883
0.0552
0.1397
0.2108
0.0222
0.0401
0.0637
-0.1881
-0.0338
-0.1028
0.1051
0.0205
-0.0080
0.0868
0.0122
0.1193
refined
2.5776
35.3968
-9.6951
X-RAY DIFFRACTION
3.8098
-1.4147
-0.1074
0.9616
0.2013
2.0151
-0.2726
-0.6079
-0.5381
0.1344
0.1643
0.1184
0.5532
-0.0704
0.0333
0.1946
0.0244
0.0235
0.1229
0.0410
0.1436
refined
9.1708
20.8048
9.0351
X-RAY DIFFRACTION
2.5397
-0.1426
-0.5638
0.9219
-0.1129
3.6292
0.0083
-0.2771
0.0967
0.0273
0.0045
0.1735
-0.0731
-0.0296
-0.0068
0.1010
-0.0026
0.0048
0.0973
-0.0144
0.1009
refined
11.0019
30.4714
7.8119
X-RAY DIFFRACTION
3.0423
-0.3176
-0.6731
0.9419
0.4375
2.4739
-0.0367
-0.2177
-0.5880
0.0098
0.0650
-0.2549
0.3940
0.3588
0.1309
0.1507
0.0129
-0.0244
0.0933
0.0549
0.2435
refined
-1.6209
22.0014
35.3214
X-RAY DIFFRACTION
4.0407
0.4407
-1.2052
0.0978
0.0787
2.5184
-0.0245
0.0772
-0.3593
-0.1259
0.0718
-0.0422
0.0721
-0.0346
0.0956
0.1069
-0.0091
0.0026
0.0429
-0.0046
0.0758
refined
-6.2500
25.6629
27.2890
X-RAY DIFFRACTION
4.6011
-0.6215
-2.7919
0.5915
0.1759
3.8608
-0.0903
-0.4370
0.1249
0.1090
0.1388
-0.0611
0.1776
0.1539
-0.0586
0.0795
-0.0040
-0.0067
0.1230
-0.0059
0.0793
refined
0.0637
32.7916
37.1894
X-RAY DIFFRACTION
3.2553
0.2167
-3.5125
0.0970
-0.3648
3.9819
0.2701
-0.1630
0.5802
0.0244
0.0821
-0.0434
-0.3445
0.0353
-0.1278
0.1141
-0.0059
0.0091
0.0953
-0.0091
0.1343
refined
-8.0747
36.5633
33.4558
X-RAY DIFFRACTION
1.9544
0.5118
0.7107
0.8849
0.2781
4.5353
-0.1349
-0.2441
0.4459
-0.1600
-0.0945
0.2516
-0.4601
0.5143
-0.0569
0.1373
-0.0473
0.0011
0.1553
-0.0275
0.1550
refined
1.1100
37.7163
23.5875
X-RAY DIFFRACTION
5.4301
4.5580
1.7483
6.1476
0.2826
1.9608
0.0256
0.0921
-0.5074
-0.2007
-0.0913
0.0625
0.2648
-0.0145
0.0228
0.1224
0.0246
0.0010
0.0873
-0.0307
0.1232
refined
-3.7902
23.8746
13.7889
X-RAY DIFFRACTION
1.6913
-1.3001
-0.6748
2.4490
1.4294
3.6945
-0.1512
0.3273
-0.2618
0.1778
0.1888
0.0432
0.5306
-0.2231
0.1472
0.1709
-0.0406
0.0222
0.1375
-0.0271
0.1786
refined
-15.6897
21.3020
16.9587
X-RAY DIFFRACTION
0.7129
0.1497
-0.1252
0.5422
0.2777
2.3166
-0.0849
0.0201
0.3224
0.1593
-0.0632
-0.2095
-0.4763
-0.0005
-0.1385
0.1465
-0.0279
-0.0424
0.0939
0.0470
0.1503
refined
-9.7847
36.4758
12.9156
X-RAY DIFFRACTION
2.8270
0.3806
-0.2193
0.6839
0.1499
4.1973
0.0363
0.2082
0.1260
0.0700
0.0178
-0.0339
0.0325
0.0576
-0.0225
0.0792
0.0134
0.0098
0.0853
0.0111
0.0818
refined
-8.9971
30.0738
14.7908
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 218 through 231 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 232 through 252 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 253 through 292 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 293 through 304 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 305 through 340 )
X-RAY DIFFRACTION
6
chain 'B' and (resid 217 through 231 )
X-RAY DIFFRACTION
7
chain 'B' and (resid 232 through 252 )
X-RAY DIFFRACTION
8
chain 'B' and (resid 253 through 269 )
X-RAY DIFFRACTION
9
chain 'B' and (resid 270 through 283 )
X-RAY DIFFRACTION
10
chain 'B' and (resid 284 through 292 )
X-RAY DIFFRACTION
11
chain 'B' and (resid 293 through 297 )
X-RAY DIFFRACTION
12
chain 'B' and (resid 298 through 310 )
X-RAY DIFFRACTION
13
chain 'B' and (resid 311 through 319 )
X-RAY DIFFRACTION
14
chain 'B' and (resid 320 through 340 )
software_defined_assembly
PISA
1
monomeric
software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
295
A
N
ILE
84
A
O
VAL
327
A
O
VAL
116
A
N
PHE
328
A
N
PHE
117
A
O
LEU
336
A
O
LEU
125
A
O
GLY
337
A
O
GLY
126
A
N
ARG
312
A
N
ARG
101
B
N
ILE
295
B
N
ILE
84
B
O
VAL
327
B
O
VAL
116
B
N
PHE
328
B
N
PHE
117
B
O
LEU
336
B
O
LEU
125
B
O
GLY
337
B
O
GLY
126
B
N
ARG
312
B
N
ARG
101
1
A
GLY
212
A
GLY
1
1
Y
1
A
HIS
213
A
HIS
2
1
Y
1
A
MET
214
A
MET
3
1
Y
1
A
GLY
215
A
GLY
4
1
Y
1
A
LYS
216
A
LYS
5
1
Y
1
A
PRO
217
A
PRO
6
1
Y
1
B
GLY
212
B
GLY
1
1
Y
1
B
HIS
213
B
HIS
2
1
Y
1
B
MET
214
B
MET
3
1
Y
1
B
GLY
215
B
GLY
4
1
Y
1
B
LYS
216
B
LYS
5
1
Y
1
9.96
1.50
119.30
129.26
B
B
B
C
N
CA
PRO
PRO
PRO
315
316
316
A
A
Y
1
B
SER
317
61.01
63.62
20.0469
-0.0100
0.0000
0.0000
0.0000
0.0000
0.0000
0.9570
0.9320
HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT
0.2414
0.1925
0.1949
1.850
41.898
1088
21347
5.10
98.74
1.000
0.500
0.18
0.1737
1
1.34
MOLECULAR REPLACEMENT
29.49
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
1.850
41.898
216
2215
82
0
1917
0.007
2072
1.183
2824
16.048
820
0.061
304
0.005
368
0.2948
0.2411
1.9338
147
2441
97.00
0.2709
0.2105
2.0358
114
2489
98.00
0.2268
0.1872
2.1633
136
2476
99.00
0.2361
0.1854
2.3304
146
2498
98.00
0.2576
0.1893
2.5648
155
2487
99.00
0.2381
0.1989
2.9359
127
2547
99.00
0.2470
0.1834
3.6986
138
2600
100.00
0.2165
0.1866
41.9084
125
2721
100.00
1.850
50.000
4IBK
21610
0.125
1
7.800
6.900
99.900
0.481
1.850
1.880
1
5.600
99.500
0.404
1.880
1.920
1
6.100
99.700
0.368
1.920
1.950
1
6.800
100.000
0.270
1.950
1.990
1
7.000
99.800
0.263
1.990
2.040
1
7.100
99.800
0.300
2.040
2.080
1
7.100
99.900
0.214
2.080
2.140
1
7.100
100.000
0.186
2.140
2.190
1
7.200
99.900
0.212
2.190
2.260
1
7.200
99.900
0.187
2.260
2.330
1
7.200
100.000
0.153
2.330
2.410
1
7.200
100.000
0.158
2.410
2.510
1
7.200
100.000
0.128
2.510
2.630
1
7.200
100.000
0.126
2.630
2.760
1
7.200
100.000
0.109
2.760
2.940
1
7.100
100.000
0.103
2.940
3.160
1
7.100
100.000
0.107
3.160
3.480
1
7.100
100.000
0.089
3.480
3.990
1
7.000
100.000
0.075
3.990
5.020
1
6.700
100.000
0.093
5.020
50.000
1
6.400
99.800
refinement
PHENIX
1.8.1_1168
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Alexei Vaguine
alexei@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/molrep.html
MOLREP
program
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
HKL-3000
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
Ebola virus VP35 bound to small molecule
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
2
N
N
5
N
N
5
N
N
A
SER
220
A
SER
9
HELX_P
A
ASP
230
A
ASP
19
1
1
11
A
THR
237
A
THR
26
HELX_P
A
SER
253
A
SER
42
1
2
17
A
SER
255
A
SER
44
HELX_P
A
GLU
269
A
GLU
58
1
3
15
A
SER
272
A
SER
61
HELX_P
A
VAL
284
A
VAL
73
1
4
13
A
PRO
285
A
PRO
74
HELX_P
A
GLN
288
A
GLN
77
5
5
4
A
SER
299
A
SER
88
HELX_P
A
ILE
303
A
ILE
92
5
6
5
A
PRO
304
A
PRO
93
HELX_P
A
LYS
309
A
LYS
98
5
7
6
A
LYS
319
A
LYS
108
HELX_P
A
ARG
322
A
ARG
111
5
8
4
B
SER
220
B
SER
9
HELX_P
B
ASP
230
B
ASP
19
1
9
11
B
THR
237
B
THR
26
HELX_P
B
SER
253
B
SER
42
1
10
17
B
SER
255
B
SER
44
HELX_P
B
GLU
269
B
GLU
58
1
11
15
B
SER
272
B
SER
61
HELX_P
B
VAL
284
B
VAL
73
1
12
13
B
SER
299
B
SER
88
HELX_P
B
ILE
303
B
ILE
92
5
13
5
B
PRO
304
B
PRO
93
HELX_P
B
LYS
309
B
LYS
98
5
14
6
B
LYS
319
B
LYS
108
HELX_P
B
ARG
322
B
ARG
111
5
15
4
TRANSCRIPTION/TRANSCRIPTION inhibitor
interferon inhibitor domain, TRANSCRIPTION-TRANSCRIPTION inhibitor complex
VP35_EBOZM
UNP
1
215
Q05127
GKPDISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAAPPV
IHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
215
340
4IBK
215
340
Q05127
A
1
4
129
215
340
4IBK
215
340
Q05127
B
1
4
129
1
expression tag
GLY
212
4IBK
A
Q05127
UNP
1
1
expression tag
HIS
213
4IBK
A
Q05127
UNP
2
1
expression tag
MET
214
4IBK
A
Q05127
UNP
3
2
expression tag
GLY
212
4IBK
B
Q05127
UNP
1
2
expression tag
HIS
213
4IBK
B
Q05127
UNP
2
2
expression tag
MET
214
4IBK
B
Q05127
UNP
3
4
4
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
VAL
294
A
VAL
83
A
ILE
297
A
ILE
86
A
TRP
324
A
TRP
113
A
LEU
330
A
LEU
119
A
THR
335
A
THR
124
A
LYS
339
A
LYS
128
A
LEU
311
A
LEU
100
A
ARG
312
A
ARG
101
B
VAL
294
B
VAL
83
B
ILE
297
B
ILE
86
B
TRP
324
B
TRP
113
B
LEU
330
B
LEU
119
B
THR
335
B
THR
124
B
LYS
339
B
LYS
128
B
LEU
311
B
LEU
100
B
ARG
312
B
ARG
101
BINDING SITE FOR RESIDUE 1DE A 401
A
1DE
401
Software
10
BINDING SITE FOR RESIDUE GOL A 402
A
GOL
402
Software
5
BINDING SITE FOR RESIDUE DMS A 403
A
DMS
403
Software
4
BINDING SITE FOR RESIDUE DMS A 404
A
DMS
404
Software
4
BINDING SITE FOR RESIDUE 1DE B 401
B
1DE
401
Software
9
A
GLN
241
A
GLN
30
10
1_555
A
GLN
244
A
GLN
33
10
1_555
A
LYS
248
A
LYS
37
10
1_555
A
LYS
251
A
LYS
40
10
1_555
A
PRO
293
A
PRO
82
10
1_555
A
ASP
302
A
ASP
91
10
1_555
A
ARG
305
A
ARG
94
10
4_455
A
DMS
403
E
DMS
10
1_555
A
HOH
557
H
HOH
10
1_555
B
GLN
329
B
GLN
118
10
1_555
A
VAL
314
A
VAL
103
5
1_555
A
PRO
315
A
PRO
104
5
1_555
A
PRO
316
A
PRO
105
5
1_555
A
THR
335
A
THR
124
5
1_555
A
HOH
603
H
HOH
5
1_555
A
HIS
296
A
HIS
85
4
1_555
A
1DE
401
C
1DE
4
1_555
B
HIS
296
B
HIS
85
4
1_555
B
GLN
329
B
GLN
118
4
1_555
A
HIS
296
A
HIS
85
4
1_555
A
GLN
329
A
GLN
118
4
1_555
B
HIS
296
B
HIS
85
4
1_555
B
1DE
401
G
1DE
4
1_555
A
GLN
329
A
GLN
118
9
1_555
A
DMS
404
F
DMS
9
1_555
B
GLN
241
B
GLN
30
9
1_555
B
GLN
244
B
GLN
33
9
1_555
B
LYS
248
B
LYS
37
9
1_555
B
LYS
251
B
LYS
40
9
1_555
B
PRO
293
B
PRO
82
9
1_555
B
ASP
302
B
ASP
91
9
1_555
B
HOH
550
I
HOH
9
1_555
19
P 21 21 21