0.007266 0.000000 0.000439 0.000000 0.019880 0.000000 0.000000 0.000000 0.029459 0.00000 0.00000 0.00000 Eldar, A. Rozenberg, H. Diskin-Posner, Y. Shakked, Z. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 93.46 90.00 137.631 50.302 34.008 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N C N 232 N O N 233 N C N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N O N 249 N N N 250 N O N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 N C N 266 N C N 267 N C N 268 N O N 269 N O N 270 N O N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 N C N 282 N C N 283 N O N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C Y 295 N C Y 296 N N Y 297 N C Y 298 N C Y 299 N N N 300 N O N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N O N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 S C N 319 N C N 320 N C N 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C N 341 N C N 342 N C N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N C N 366 N N N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C N 388 N C N 389 N S N 390 N C N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C N 414 N O N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C N 431 N C N 432 N C N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C N 448 N O N 449 N O N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N N N 458 S C N 459 N C N 460 N O N 461 R C N 462 N O N 463 N C N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N N N 475 S C N 476 N C N 477 N O N 478 N C Y 479 N C Y 480 N C Y 481 N C Y 482 N N Y 483 N C Y 484 N C Y 485 N C Y 486 N C Y 487 N C N 488 N O N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N N N 502 S C N 503 N C N 504 N O N 505 N C Y 506 N C Y 507 N C Y 508 N C Y 509 N C Y 510 N C Y 511 N C N 512 N O N 513 N O N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N N N 526 S C N 527 N C N 528 N O N 529 N C N 530 N C N 531 N C N 532 N O N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing Y 298 N sing Y 299 N doub Y 300 N doub N 301 N sing Y 302 N sing N 303 N sing Y 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N doub N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N doub N 402 N sing N 403 N sing N 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N doub N 411 N sing Y 412 N doub N 413 N sing Y 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N doub N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N doub N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N doub N 471 N sing N 472 N sing N 473 N sing N 474 N sing Y 475 N doub Y 476 N sing Y 477 N sing N 478 N sing Y 479 N doub Y 480 N sing Y 481 N sing N 482 N sing Y 483 N sing Y 484 N doub N 485 N sing Y 486 N doub N 487 N sing Y 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N doub N 499 N sing N 500 N sing N 501 N sing N 502 N sing Y 503 N doub Y 504 N sing Y 505 N sing N 506 N sing Y 507 N doub N 508 N sing Y 509 N doub N 510 N sing Y 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N doub N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 41 8748 8759 10.1093/nar/gkt630 23863845 Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions. 2013 10.2210/pdb4ibv/pdb pdb_00004ibv 100 1 Pt coated Si mirror in Kirkpatrick-Baez geometry CCD 2009-02-17 MARMOSAIC 225 mm CCD SILICON (111) SINGLE WAVELENGTH M x-ray 1 0.8726 1.0 ID23-2 ESRF 0.8726 SYNCHROTRON ESRF BEAMLINE ID23-2 22521.646 Cellular tumor antigen p53 DNA binding domain R273C, S240R 1 man polymer 3664.380 DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3') 1 syn polymer 62.068 1,2-ETHANEDIOL 7 syn non-polymer 65.409 ZINC ION 1 syn non-polymer 18.015 water 164 nat water Antigen NY-CO-13, Phosphoprotein p53, Tumor suppressor p53 no no SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNRSCMGGMNRRPILT IITLEDSSGNLLGRNSFEVCVCACPGRDRRTEEENLRKKG SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNRSCMGGMNRRPILT IITLEDSSGNLLGRNSFEVCVCACPGRDRRTEEENLRKKG A polypeptide(L) no no (DC)(DG)(DG)(DG)(DC)(DA)(DT)(DG)(DC)(DC)(DC)(DG) CGGGCATGCCCG B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample P53, TP53 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) plasmid pET-27-b 1 2.24 45.18 VAPOR DIFFUSION, HANGING DROP 6.1 1:2.4 PROTEIN/DNA RATIO, 16% PEG 3350, 0.18M NH4F, pH 6.1, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 -1.252 1 19 B 3 B 10 -5.602 B_DG3:DC10_B 1 -8.359 -0.333 0.076 -0.244 -3.987 1 19 B 4 B 9 0.383 B_DG4:DC9_B 2 -6.121 -0.167 -0.412 -0.083 -1.312 1 19 B 5 B 8 1.854 B_DC5:DG8_B 3 -6.585 0.131 0.148 -0.002 2.477 1 20 B 6 B 7 8.296 B_DA6:DT7_B 4 -13.242 -0.029 0.154 -0.117 -2.477 1 20 B 7 B 6 8.296 B_DT7:DA6_B 5 -13.242 0.029 0.154 -0.117 1.312 1 19 B 8 B 5 1.854 B_DG8:DC5_B 6 -6.585 -0.131 0.148 -0.002 3.987 1 19 B 9 B 4 0.383 B_DC9:DG4_B 7 -6.121 0.167 -0.412 -0.083 1.252 1 19 B 10 B 3 -5.602 B_DC10:DG3_B 8 -8.359 0.333 0.076 -0.244 3.670 34.294 B B 3 4 0.363 B B 10 9 3.567 0.214 0.992 -0.058 BB_DG3DG4:DC9DC10_BB 1 4.973 -8.462 33.942 -0.136 -0.815 3.366 35.554 B B 4 5 0.963 B B 9 8 3.277 0.586 -0.847 0.128 BB_DG4DC5:DG8DC9_BB 2 -5.173 8.500 35.183 0.123 0.618 3.370 43.562 B B 5 6 4.809 B B 8 7 3.280 3.564 0.271 1.179 BB_DC5DA6:DT7DG8_BB 3 1.712 -2.309 43.391 1.239 -0.197 3.691 28.156 B B 6 7 8.603 B B 7 6 3.646 4.171 0.000 0.579 BB_DA6DT7:DA6DT7_BB 4 0.000 0.000 27.851 0.089 0.000 3.370 43.562 B B 7 8 4.809 B B 6 5 3.280 3.564 -0.271 1.179 BB_DT7DG8:DC5DA6_BB 5 -1.712 2.309 43.391 1.239 0.197 3.366 35.554 B B 8 9 0.963 B B 5 4 3.277 0.586 0.847 0.128 BB_DG8DC9:DG4DC5_BB 6 5.173 -8.500 35.183 0.123 -0.618 3.670 34.294 B B 9 10 0.363 B B 4 3 3.567 0.213 -0.992 -0.058 BB_DC9DC10:DG3DG4_BB 7 -4.973 8.462 33.942 -0.136 0.815 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Database references Refinement description Data collection Database references Derived calculations Refinement description 1 0 2013-08-14 1 1 2013-10-23 1 2 2017-11-15 1 3 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2012-12-09 REL REL EDO 1,2-ETHANEDIOL ZN ZINC ION HOH water 2AC0 PDB entry 2AC0, chain A PDB experimental model EDO 1 3 EDO EDO 301 A EDO 2 3 EDO EDO 302 A EDO 3 3 EDO EDO 303 A EDO 4 3 EDO EDO 304 A EDO 5 3 EDO EDO 305 A EDO 6 3 EDO EDO 306 A EDO 7 3 EDO EDO 307 A ZN 1 4 ZN ZN 308 A HOH 1 5 HOH HOH 401 A HOH 2 5 HOH HOH 402 A HOH 3 5 HOH HOH 403 A HOH 4 5 HOH HOH 404 A HOH 5 5 HOH HOH 405 A HOH 6 5 HOH HOH 406 A HOH 7 5 HOH HOH 407 A HOH 8 5 HOH HOH 408 A HOH 9 5 HOH HOH 409 A HOH 10 5 HOH HOH 410 A HOH 11 5 HOH HOH 411 A HOH 12 5 HOH HOH 412 A HOH 13 5 HOH HOH 413 A HOH 14 5 HOH HOH 414 A HOH 15 5 HOH HOH 415 A HOH 16 5 HOH HOH 416 A HOH 17 5 HOH HOH 417 A HOH 18 5 HOH HOH 418 A HOH 21 5 HOH HOH 419 A HOH 22 5 HOH HOH 420 A HOH 23 5 HOH HOH 421 A HOH 24 5 HOH HOH 422 A HOH 25 5 HOH HOH 423 A HOH 26 5 HOH HOH 424 A HOH 27 5 HOH HOH 425 A HOH 28 5 HOH HOH 426 A HOH 29 5 HOH HOH 427 A HOH 30 5 HOH HOH 428 A HOH 31 5 HOH HOH 429 A HOH 32 5 HOH HOH 430 A HOH 33 5 HOH HOH 431 A HOH 34 5 HOH HOH 432 A HOH 35 5 HOH HOH 433 A HOH 36 5 HOH HOH 434 A HOH 37 5 HOH HOH 435 A HOH 38 5 HOH HOH 436 A HOH 39 5 HOH HOH 437 A HOH 40 5 HOH HOH 438 A HOH 41 5 HOH HOH 439 A HOH 42 5 HOH HOH 440 A HOH 43 5 HOH HOH 441 A HOH 44 5 HOH HOH 442 A HOH 45 5 HOH HOH 443 A HOH 46 5 HOH HOH 444 A HOH 47 5 HOH HOH 445 A HOH 48 5 HOH HOH 446 A HOH 49 5 HOH HOH 447 A HOH 50 5 HOH HOH 448 A HOH 51 5 HOH HOH 449 A HOH 52 5 HOH HOH 450 A HOH 53 5 HOH HOH 451 A HOH 54 5 HOH HOH 452 A HOH 55 5 HOH HOH 453 A HOH 56 5 HOH HOH 454 A HOH 57 5 HOH HOH 455 A HOH 58 5 HOH HOH 456 A HOH 59 5 HOH HOH 457 A HOH 60 5 HOH HOH 458 A HOH 61 5 HOH HOH 459 A HOH 62 5 HOH HOH 460 A HOH 63 5 HOH HOH 461 A HOH 64 5 HOH HOH 462 A HOH 66 5 HOH HOH 463 A HOH 67 5 HOH HOH 464 A HOH 68 5 HOH HOH 465 A HOH 69 5 HOH HOH 466 A HOH 71 5 HOH HOH 467 A HOH 72 5 HOH HOH 468 A HOH 73 5 HOH HOH 469 A HOH 74 5 HOH HOH 470 A HOH 80 5 HOH HOH 471 A HOH 82 5 HOH HOH 472 A HOH 83 5 HOH HOH 473 A HOH 84 5 HOH HOH 474 A HOH 85 5 HOH HOH 475 A HOH 86 5 HOH HOH 476 A HOH 87 5 HOH HOH 477 A HOH 88 5 HOH HOH 478 A HOH 89 5 HOH HOH 479 A HOH 90 5 HOH HOH 480 A HOH 91 5 HOH HOH 481 A HOH 93 5 HOH HOH 482 A HOH 94 5 HOH HOH 483 A HOH 95 5 HOH HOH 484 A HOH 96 5 HOH HOH 485 A HOH 97 5 HOH HOH 486 A HOH 98 5 HOH HOH 487 A HOH 100 5 HOH HOH 488 A HOH 102 5 HOH HOH 489 A HOH 103 5 HOH HOH 490 A HOH 104 5 HOH HOH 491 A HOH 105 5 HOH HOH 492 A HOH 106 5 HOH HOH 493 A HOH 107 5 HOH HOH 494 A HOH 108 5 HOH HOH 495 A HOH 109 5 HOH HOH 496 A HOH 110 5 HOH HOH 497 A HOH 111 5 HOH HOH 498 A HOH 112 5 HOH HOH 499 A HOH 113 5 HOH HOH 500 A HOH 114 5 HOH HOH 501 A HOH 117 5 HOH HOH 502 A HOH 118 5 HOH HOH 503 A HOH 120 5 HOH HOH 504 A HOH 121 5 HOH HOH 505 A HOH 122 5 HOH HOH 506 A HOH 123 5 HOH HOH 507 A HOH 124 5 HOH HOH 508 A HOH 125 5 HOH HOH 509 A HOH 126 5 HOH HOH 510 A HOH 127 5 HOH HOH 511 A HOH 128 5 HOH HOH 512 A HOH 129 5 HOH HOH 513 A HOH 130 5 HOH HOH 514 A HOH 131 5 HOH HOH 515 A HOH 132 5 HOH HOH 516 A HOH 133 5 HOH HOH 517 A HOH 135 5 HOH HOH 518 A HOH 136 5 HOH HOH 519 A HOH 137 5 HOH HOH 520 A HOH 139 5 HOH HOH 521 A HOH 140 5 HOH HOH 522 A HOH 141 5 HOH HOH 523 A HOH 142 5 HOH HOH 524 A HOH 143 5 HOH HOH 525 A HOH 144 5 HOH HOH 526 A HOH 145 5 HOH HOH 527 A HOH 146 5 HOH HOH 528 A HOH 147 5 HOH HOH 529 A HOH 149 5 HOH HOH 530 A HOH 150 5 HOH HOH 531 A HOH 151 5 HOH HOH 532 A HOH 152 5 HOH HOH 533 A HOH 154 5 HOH HOH 534 A HOH 155 5 HOH HOH 535 A HOH 157 5 HOH HOH 536 A HOH 158 5 HOH HOH 537 A HOH 159 5 HOH HOH 538 A HOH 160 5 HOH HOH 539 A HOH 162 5 HOH HOH 540 A HOH 164 5 HOH HOH 541 A HOH 165 5 HOH HOH 542 A HOH 166 5 HOH HOH 543 A HOH 167 5 HOH HOH 544 A HOH 19 5 HOH HOH 101 B HOH 20 5 HOH HOH 102 B HOH 65 5 HOH HOH 103 B HOH 70 5 HOH HOH 104 B HOH 75 5 HOH HOH 105 B HOH 76 5 HOH HOH 106 B HOH 77 5 HOH HOH 107 B HOH 78 5 HOH HOH 108 B HOH 79 5 HOH HOH 109 B HOH 81 5 HOH HOH 110 B HOH 92 5 HOH HOH 111 B HOH 99 5 HOH HOH 112 B HOH 101 5 HOH HOH 113 B HOH 115 5 HOH HOH 114 B HOH 116 5 HOH HOH 115 B HOH 119 5 HOH HOH 116 B HOH 153 5 HOH HOH 117 B HOH 156 5 HOH HOH 118 B HOH 161 5 HOH HOH 119 B HOH 163 5 HOH HOH 120 B SER 94 n 1 SER 94 A SER 95 n 2 SER 95 A SER 96 n 3 SER 96 A VAL 97 n 4 VAL 97 A PRO 98 n 5 PRO 98 A SER 99 n 6 SER 99 A GLN 100 n 7 GLN 100 A LYS 101 n 8 LYS 101 A THR 102 n 9 THR 102 A TYR 103 n 10 TYR 103 A GLN 104 n 11 GLN 104 A GLY 105 n 12 GLY 105 A SER 106 n 13 SER 106 A TYR 107 n 14 TYR 107 A GLY 108 n 15 GLY 108 A PHE 109 n 16 PHE 109 A ARG 110 n 17 ARG 110 A LEU 111 n 18 LEU 111 A GLY 112 n 19 GLY 112 A PHE 113 n 20 PHE 113 A LEU 114 n 21 LEU 114 A HIS 115 n 22 HIS 115 A SER 116 n 23 SER 116 A GLY 117 n 24 GLY 117 A THR 118 n 25 THR 118 A ALA 119 n 26 ALA 119 A LYS 120 n 27 LYS 120 A SER 121 n 28 SER 121 A VAL 122 n 29 VAL 122 A THR 123 n 30 THR 123 A CYS 124 n 31 CYS 124 A THR 125 n 32 THR 125 A TYR 126 n 33 TYR 126 A SER 127 n 34 SER 127 A PRO 128 n 35 PRO 128 A ALA 129 n 36 ALA 129 A LEU 130 n 37 LEU 130 A ASN 131 n 38 ASN 131 A LYS 132 n 39 LYS 132 A MET 133 n 40 MET 133 A PHE 134 n 41 PHE 134 A CYS 135 n 42 CYS 135 A GLN 136 n 43 GLN 136 A LEU 137 n 44 LEU 137 A ALA 138 n 45 ALA 138 A LYS 139 n 46 LYS 139 A THR 140 n 47 THR 140 A CYS 141 n 48 CYS 141 A PRO 142 n 49 PRO 142 A VAL 143 n 50 VAL 143 A GLN 144 n 51 GLN 144 A LEU 145 n 52 LEU 145 A TRP 146 n 53 TRP 146 A VAL 147 n 54 VAL 147 A ASP 148 n 55 ASP 148 A SER 149 n 56 SER 149 A THR 150 n 57 THR 150 A PRO 151 n 58 PRO 151 A PRO 152 n 59 PRO 152 A PRO 153 n 60 PRO 153 A GLY 154 n 61 GLY 154 A THR 155 n 62 THR 155 A ARG 156 n 63 ARG 156 A VAL 157 n 64 VAL 157 A ARG 158 n 65 ARG 158 A ALA 159 n 66 ALA 159 A MET 160 n 67 MET 160 A ALA 161 n 68 ALA 161 A ILE 162 n 69 ILE 162 A TYR 163 n 70 TYR 163 A LYS 164 n 71 LYS 164 A GLN 165 n 72 GLN 165 A SER 166 n 73 SER 166 A GLN 167 n 74 GLN 167 A HIS 168 n 75 HIS 168 A MET 169 n 76 MET 169 A THR 170 n 77 THR 170 A GLU 171 n 78 GLU 171 A VAL 172 n 79 VAL 172 A VAL 173 n 80 VAL 173 A ARG 174 n 81 ARG 174 A ARG 175 n 82 ARG 175 A CYS 176 n 83 CYS 176 A PRO 177 n 84 PRO 177 A HIS 178 n 85 HIS 178 A HIS 179 n 86 HIS 179 A GLU 180 n 87 GLU 180 A ARG 181 n 88 ARG 181 A CYS 182 n 89 CYS 182 A SER 183 n 90 SER 183 A n 91 184 A n 92 185 A n 93 186 A GLY 187 n 94 GLY 187 A LEU 188 n 95 LEU 188 A ALA 189 n 96 ALA 189 A PRO 190 n 97 PRO 190 A PRO 191 n 98 PRO 191 A GLN 192 n 99 GLN 192 A HIS 193 n 100 HIS 193 A LEU 194 n 101 LEU 194 A ILE 195 n 102 ILE 195 A ARG 196 n 103 ARG 196 A VAL 197 n 104 VAL 197 A GLU 198 n 105 GLU 198 A GLY 199 n 106 GLY 199 A ASN 200 n 107 ASN 200 A LEU 201 n 108 LEU 201 A ARG 202 n 109 ARG 202 A VAL 203 n 110 VAL 203 A GLU 204 n 111 GLU 204 A TYR 205 n 112 TYR 205 A LEU 206 n 113 LEU 206 A ASP 207 n 114 ASP 207 A ASP 208 n 115 ASP 208 A ARG 209 n 116 ARG 209 A ASN 210 n 117 ASN 210 A THR 211 n 118 THR 211 A PHE 212 n 119 PHE 212 A ARG 213 n 120 ARG 213 A HIS 214 n 121 HIS 214 A SER 215 n 122 SER 215 A VAL 216 n 123 VAL 216 A VAL 217 n 124 VAL 217 A VAL 218 n 125 VAL 218 A PRO 219 n 126 PRO 219 A TYR 220 n 127 TYR 220 A GLU 221 n 128 GLU 221 A PRO 222 n 129 PRO 222 A PRO 223 n 130 PRO 223 A GLU 224 n 131 GLU 224 A VAL 225 n 132 VAL 225 A GLY 226 n 133 GLY 226 A SER 227 n 134 SER 227 A ASP 228 n 135 ASP 228 A CYS 229 n 136 CYS 229 A THR 230 n 137 THR 230 A THR 231 n 138 THR 231 A ILE 232 n 139 ILE 232 A HIS 233 n 140 HIS 233 A TYR 234 n 141 TYR 234 A ASN 235 n 142 ASN 235 A TYR 236 n 143 TYR 236 A MET 237 n 144 MET 237 A CYS 238 n 145 CYS 238 A ASN 239 n 146 ASN 239 A ARG 240 n 147 ARG 240 A SER 241 n 148 SER 241 A CYS 242 n 149 CYS 242 A MET 243 n 150 MET 243 A GLY 244 n 151 GLY 244 A GLY 245 n 152 GLY 245 A MET 246 n 153 MET 246 A ASN 247 n 154 ASN 247 A ARG 248 n 155 ARG 248 A ARG 249 n 156 ARG 249 A PRO 250 n 157 PRO 250 A ILE 251 n 158 ILE 251 A LEU 252 n 159 LEU 252 A THR 253 n 160 THR 253 A ILE 254 n 161 ILE 254 A ILE 255 n 162 ILE 255 A THR 256 n 163 THR 256 A LEU 257 n 164 LEU 257 A GLU 258 n 165 GLU 258 A ASP 259 n 166 ASP 259 A SER 260 n 167 SER 260 A SER 261 n 168 SER 261 A GLY 262 n 169 GLY 262 A ASN 263 n 170 ASN 263 A LEU 264 n 171 LEU 264 A LEU 265 n 172 LEU 265 A GLY 266 n 173 GLY 266 A ARG 267 n 174 ARG 267 A ASN 268 n 175 ASN 268 A SER 269 n 176 SER 269 A PHE 270 n 177 PHE 270 A GLU 271 n 178 GLU 271 A VAL 272 n 179 VAL 272 A CYS 273 n 180 CYS 273 A VAL 274 n 181 VAL 274 A CYS 275 n 182 CYS 275 A ALA 276 n 183 ALA 276 A CYS 277 n 184 CYS 277 A PRO 278 n 185 PRO 278 A GLY 279 n 186 GLY 279 A ARG 280 n 187 ARG 280 A ASP 281 n 188 ASP 281 A ARG 282 n 189 ARG 282 A ARG 283 n 190 ARG 283 A THR 284 n 191 THR 284 A GLU 285 n 192 GLU 285 A GLU 286 n 193 GLU 286 A GLU 287 n 194 GLU 287 A ASN 288 n 195 ASN 288 A LEU 289 n 196 LEU 289 A ARG 290 n 197 ARG 290 A LYS 291 n 198 LYS 291 A LYS 292 n 199 LYS 292 A GLY 293 n 200 GLY 293 A DC 1 n 1 DC 1 B DG 2 n 2 DG 2 B DG 3 n 3 DG 3 B DG 4 n 4 DG 4 B DC 5 n 5 DC 5 B DA 6 n 6 DA 6 B DT 7 n 7 DT 7 B DG 8 n 8 DG 8 B DC 9 n 9 DC 9 B DC 10 n 10 DC 10 B DC 11 n 11 DC 11 B n 12 12 B 2.9767 -1.3751 0.5526 2.2381 -0.0615 0.8200 -0.1187 0.1088 0.4307 0.1479 -0.1087 -0.5258 -0.1170 0.0083 0.1585 0.1446 -0.0215 -0.0482 0.1111 0.0402 0.1951 refined 24.3767 25.6079 -2.3676 X-RAY DIFFRACTION 5.3704 -4.0558 -1.6458 5.5512 -0.0730 2.4400 -0.1224 0.5668 -1.1194 -0.1411 -0.0810 0.5387 0.1850 -0.5748 0.3273 0.2177 -0.0533 0.0365 0.2567 -0.0513 0.2000 refined 7.4378 14.6569 -5.0018 X-RAY DIFFRACTION 3.5249 -1.4821 1.0769 3.2864 -0.0491 1.9552 -0.0225 0.2402 0.0414 0.0028 -0.1132 -0.1962 0.0274 0.0436 0.0894 0.1051 0.0034 0.0189 0.0986 0.0190 0.0598 refined 22.1358 19.3778 -4.4248 X-RAY DIFFRACTION 7.6206 1.6681 2.5955 3.5404 4.3642 5.9927 0.0419 -0.5907 0.9941 -0.1285 -0.1361 -0.0898 -0.4998 -0.3605 0.1235 0.2927 0.0154 -0.0888 0.1374 0.0203 0.4119 refined 16.2072 44.0953 -1.2346 X-RAY DIFFRACTION 0.3616 0.0838 0.2190 0.1298 1.2145 6.5309 -0.0048 0.0434 0.0751 0.1097 0.1589 -0.0377 0.1131 0.1951 -0.1659 0.2624 0.0175 0.0005 0.2587 0.0406 0.1554 refined -1.5000 40.1717 0.5263 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 CHAIN A AND (RESID 94:176) X-RAY DIFFRACTION 2 CHAIN A AND (RESID 177:194) X-RAY DIFFRACTION 3 CHAIN A AND (RESID 195:277) X-RAY DIFFRACTION 4 CHAIN A AND (RESID 278:293) X-RAY DIFFRACTION 5 CHAIN B AND (RESID 1:11) author_and_software_defined_assembly PISA 4 tetrameric 5450 -10 23150 A CYS 176 A SG CYS 83 1_555 A ZN 308 J ZN ZN 1_555 A HIS 179 A ND1 HIS 86 1_555 105.6 A CYS 176 A SG CYS 83 1_555 A ZN 308 J ZN ZN 1_555 A CYS 238 A SG CYS 145 1_555 108.9 A HIS 179 A ND1 HIS 86 1_555 A ZN 308 J ZN ZN 1_555 A CYS 238 A SG CYS 145 1_555 114.1 A CYS 176 A SG CYS 83 1_555 A ZN 308 J ZN ZN 1_555 A CYS 242 A SG CYS 149 1_555 114.4 A HIS 179 A ND1 HIS 86 1_555 A ZN 308 J ZN ZN 1_555 A CYS 242 A SG CYS 149 1_555 100.6 A CYS 238 A SG CYS 145 1_555 A ZN 308 J ZN ZN 1_555 A CYS 242 A SG CYS 149 1_555 112.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 110 A N ARG 17 A O TRP 146 A O TRP 53 A N LEU 145 A N LEU 52 A O THR 230 A O THR 137 A O ASN 235 A O ASN 142 A N ARG 196 A N ARG 103 A N SER 127 A N SER 34 A O LYS 132 A O LYS 39 A N MET 133 A N MET 40 A O GLU 271 A O GLU 178 A O LEU 265 A O LEU 172 A N LEU 257 A N LEU 164 A O GLU 258 A O GLU 165 A N ARG 156 A N ARG 63 A N VAL 157 A N VAL 64 A O VAL 218 A O VAL 125 A O VAL 217 A O VAL 124 A N GLU 204 A N GLU 111 1 A CD1 LEU 114 A CD1 LEU 21 1 Y 1 A CD2 LEU 114 A CD2 LEU 21 1 Y 1 A CD1 LEU 188 A CD1 LEU 95 1 Y 1 A CD2 LEU 188 A CD2 LEU 95 1 Y 1 A CG GLU 221 A CG GLU 128 1 Y 1 A CD GLU 221 A CD GLU 128 1 Y 1 A OE1 GLU 221 A OE1 GLU 128 1 Y 1 A OE2 GLU 221 A OE2 GLU 128 1 Y 1 A CB ASP 228 A CB ASP 135 1 Y 1 A CG ASP 228 A CG ASP 135 1 Y 1 A OD1 ASP 228 A OD1 ASP 135 1 Y 1 A OD2 ASP 228 A OD2 ASP 135 1 Y 1 A ASP 184 A ASP 91 1 Y 1 A SER 185 A SER 92 1 Y 1 A ASP 186 A ASP 93 1 Y 1 B DG 12 B DG 12 1 Y 1 -6.73 0.80 109.40 102.67 B B B O5' C5' C4' DC DC DC 1 1 1 N 1 1.93 0.30 108.30 110.23 B B B O4' C1' N9 DG DG DG 4 4 4 N 1 -3.34 0.40 104.50 101.16 B B B O4' C4' C3' DA DA DA 6 6 6 N 1 -7.26 1.00 110.10 102.84 B B B C1' O4' C4' DC DC DC 11 11 11 B B B N 1 5.33 0.30 108.30 113.63 B B B O4' C1' N1 DC DC DC 11 11 11 B B B N 1 A PRO 223 -45.36 156.01 1 A VAL 225 165.90 126.51 28.0250 0.2294 0.1614 0.1648 2.10 47.235 667 13262 13262 5.03 96.25 1.000 0.260 0.23 1 1.34 MOLECULAR REPLACEMENT 24.42 0.90 1.11 PDB entry 2AC0, chain A ML FLAT BULK SOLVENT MODEL 2.10 47.235 164 1949 29 221 1535 0.007 1947 1.210 2674 18.445 771 0.078 284 0.006 315 0.2416 0.1808 2.2580 101 2293 87.00 0.2581 0.1786 2.4852 156 2460 97.00 0.2552 0.1839 2.8448 143 2581 99.00 0.2253 0.1604 3.5839 138 2591 99.00 0.2031 0.1415 47.2472 129 2670 99.00 2.100 50.000 4IBV 13264 0 0 0.082 1 8.800 6.200 96.600 0.255 2.100 2.140 1 3.300 83.600 0.251 2.140 2.180 1 3.700 88.700 0.213 2.180 2.220 1 4.100 90.100 0.209 2.220 2.260 1 4.300 92.700 0.210 2.260 2.310 1 4.700 95.200 0.191 2.310 2.370 1 5.000 97.000 0.190 2.370 2.420 1 5.300 96.600 0.182 2.420 2.490 1 5.800 98.000 0.163 2.490 2.560 1 6.000 98.600 0.157 2.560 2.650 1 6.400 98.600 0.145 2.650 2.740 1 6.700 98.800 0.134 2.740 2.850 1 7.100 98.600 0.123 2.850 2.980 1 7.500 99.100 0.105 2.980 3.140 1 7.600 99.000 0.080 3.140 3.330 1 7.700 99.300 0.065 3.330 3.590 1 7.700 99.100 0.058 3.590 3.950 1 7.700 99.300 0.053 3.950 4.520 1 7.600 99.400 0.050 4.520 5.700 1 7.600 99.600 0.045 5.700 50.000 1 7.300 99.600 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO package data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package dev_1405 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection DNA data reduction HKL-2000 data scaling HKL-2000 phasing MOLREP Human p53 core domain with hot spot mutation R273C and second-site suppressor mutation S240R in sequence-specific complex with DNA 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 5 N N 5 N N A CYS 176 A CYS 83 HELX_P A CYS 182 A CYS 89 1 1 7 A CYS 277 A CYS 184 HELX_P A GLY 293 A GLY 200 1 2 17 metalc 2.282 A CYS 176 A SG CYS 83 1_555 A ZN 308 J ZN ZN 1_555 metalc 2.094 A HIS 179 A ND1 HIS 86 1_555 A ZN 308 J ZN ZN 1_555 metalc 2.389 A CYS 238 A SG CYS 145 1_555 A ZN 308 J ZN ZN 1_555 metalc 2.304 A CYS 242 A SG CYS 149 1_555 A ZN 308 J ZN ZN 1_555 hydrog WATSON-CRICK B DG 3 B N1 DG 3 1_555 B DC 10 B N3 DC 10 2_555 hydrog WATSON-CRICK B DG 3 B N2 DG 3 1_555 B DC 10 B O2 DC 10 2_555 hydrog WATSON-CRICK B DG 3 B O6 DG 3 1_555 B DC 10 B N4 DC 10 2_555 hydrog WATSON-CRICK B DG 4 B N1 DG 4 1_555 B DC 9 B N3 DC 9 2_555 hydrog WATSON-CRICK B DG 4 B N2 DG 4 1_555 B DC 9 B O2 DC 9 2_555 hydrog WATSON-CRICK B DG 4 B O6 DG 4 1_555 B DC 9 B N4 DC 9 2_555 hydrog WATSON-CRICK B DC 5 B N3 DC 5 1_555 B DG 8 B N1 DG 8 2_555 hydrog WATSON-CRICK B DC 5 B N4 DC 5 1_555 B DG 8 B O6 DG 8 2_555 hydrog WATSON-CRICK B DC 5 B O2 DC 5 1_555 B DG 8 B N2 DG 8 2_555 hydrog WATSON-CRICK B DA 6 B N1 DA 6 1_555 B DT 7 B N3 DT 7 2_555 hydrog WATSON-CRICK B DA 6 B N6 DA 6 1_555 B DT 7 B O4 DT 7 2_555 hydrog WATSON-CRICK B DT 7 B N3 DT 7 1_555 B DA 6 B N1 DA 6 2_555 hydrog WATSON-CRICK B DT 7 B O4 DT 7 1_555 B DA 6 B N6 DA 6 2_555 hydrog WATSON-CRICK B DG 8 B N1 DG 8 1_555 B DC 5 B N3 DC 5 2_555 hydrog WATSON-CRICK B DG 8 B N2 DG 8 1_555 B DC 5 B O2 DC 5 2_555 hydrog WATSON-CRICK B DG 8 B O6 DG 8 1_555 B DC 5 B N4 DC 5 2_555 hydrog WATSON-CRICK B DC 9 B N3 DC 9 1_555 B DG 4 B N1 DG 4 2_555 hydrog WATSON-CRICK B DC 9 B N4 DC 9 1_555 B DG 4 B O6 DG 4 2_555 hydrog WATSON-CRICK B DC 9 B O2 DC 9 1_555 B DG 4 B N2 DG 4 2_555 hydrog WATSON-CRICK B DC 10 B N3 DC 10 1_555 B DG 3 B N1 DG 3 2_555 hydrog WATSON-CRICK B DC 10 B N4 DC 10 1_555 B DG 3 B O6 DG 3 2_555 hydrog WATSON-CRICK B DC 10 B O2 DC 10 1_555 B DG 3 B N2 DG 3 2_555 DNA BINDING PROTEIN/DNA METAL-BINDING, LOOP-SHEET-HELIX MOTIF, TRANSCRIPTION, ACTIVATOR, ANTI-ONCOGENE, APOPTOSIS, CELL CYCLE, DISEASE MUTATION, RESCUE MUTATION, TUMOR SUPPRESSOR, DNA BINDING PROTEIN-DNA complex P53_HUMAN UNP 1 94 P04637 SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT IITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKG 4IBV PDB 2 4IBV 94 293 4IBV 94 293 P04637 A 1 1 200 1 12 4IBV 1 12 4IBV B 2 1 12 1 SER engineered mutation ARG 240 4IBV A P04637 UNP 240 147 1 ARG engineered mutation CYS 273 4IBV A P04637 UNP 273 180 4 7 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 110 A ARG 17 A GLY 112 A GLY 19 A THR 140 A THR 47 A TRP 146 A TRP 53 A THR 230 A THR 137 A TYR 236 A TYR 143 A ILE 195 A ILE 102 A GLU 198 A GLU 105 A CYS 124 A CYS 31 A SER 127 A SER 34 A LYS 132 A LYS 39 A CYS 135 A CYS 42 A LEU 264 A LEU 171 A VAL 274 A VAL 181 A ILE 251 A ILE 158 A GLU 258 A GLU 165 A ARG 156 A ARG 63 A TYR 163 A TYR 70 A HIS 214 A HIS 121 A PRO 219 A PRO 126 A GLU 204 A GLU 111 A ASP 207 A ASP 114 BINDING SITE FOR RESIDUE EDO A 301 A EDO 301 Software 5 BINDING SITE FOR RESIDUE EDO A 302 A EDO 302 Software 9 BINDING SITE FOR RESIDUE EDO A 303 A EDO 303 Software 7 BINDING SITE FOR RESIDUE EDO A 304 A EDO 304 Software 7 BINDING SITE FOR RESIDUE EDO A 305 A EDO 305 Software 5 BINDING SITE FOR RESIDUE EDO A 306 A EDO 306 Software 8 BINDING SITE FOR RESIDUE EDO A 307 A EDO 307 Software 4 BINDING SITE FOR RESIDUE ZN A 308 A ZN 308 Software 4 A PRO 177 A PRO 84 5 2_555 A HIS 178 A HIS 85 5 1_555 A ARG 181 A ARG 88 5 1_555 A CYS 182 A CYS 89 5 1_555 A GLY 244 A GLY 151 5 2_555 A THR 140 A THR 47 9 1_556 A SER 166 A SER 73 9 1_555 A GLN 167 A GLN 74 9 1_555 A HIS 168 A HIS 75 9 1_555 A MET 169 A MET 76 9 1_555 A THR 170 A THR 77 9 1_555 A GLU 171 A GLU 78 9 1_555 A GLU 198 A GLU 105 9 1_556 A HOH 482 K HOH 9 1_555 A ASN 131 A ASN 38 7 4_545 A PRO 152 A PRO 59 7 1_555 A ASP 259 A ASP 166 7 1_555 A SER 260 A SER 167 7 1_555 A SER 261 A SER 168 7 1_555 A HOH 405 K HOH 7 1_555 A HOH 484 K HOH 7 1_555 A GLY 154 A GLY 61 7 1_555 A THR 155 A THR 62 7 1_555 A ARG 156 A ARG 63 7 1_555 A PRO 219 A PRO 126 7 1_555 A EDO 305 G EDO 7 4_545 A EDO 306 H EDO 7 1_555 A HOH 426 K HOH 7 1_555 A LYS 101 A LYS 8 5 1_555 A THR 102 A THR 9 5 1_555 A GLY 154 A GLY 61 5 4_555 A SER 260 A SER 167 5 4_555 A EDO 304 F EDO 5 4_555 A PRO 151 A PRO 58 8 1_555 A PRO 152 A PRO 59 8 1_555 A PRO 153 A PRO 60 8 1_555 A THR 155 A THR 62 8 1_555 A TYR 220 A TYR 127 8 1_555 A PRO 222 A PRO 129 8 1_555 A EDO 304 F EDO 8 1_555 A HOH 498 K HOH 8 1_555 A GLU 180 A GLU 87 4 1_555 A ARG 181 A ARG 88 4 1_555 A SER 183 A SER 90 4 1_555 A PRO 191 A PRO 98 4 1_555 A CYS 176 A CYS 83 4 1_555 A HIS 179 A HIS 86 4 1_555 A CYS 238 A CYS 145 4 1_555 A CYS 242 A CYS 149 4 1_555 5 C 1 2 1