0.012106
0.006989
0.000000
0.000000
0.013978
0.000000
0.000000
0.000000
0.029733
0.00000
0.00000
0.00000
Margiolaki, I.
Giannopoulou, A.E.
Wright, J.P.
Knight, L.
Norrman, M.
Schluckebier, G.
Fitch, A.
Von Dreele, R.B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
82.607
82.607
33.632
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
69
978
990
10.1107/S0907444913003867
23695242
High-resolution powder X-ray data reveal the T6 hexameric form of bovine insulin
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
295
1
1
DOUBLE SI(111) monochromator
CCD
2006-11-07
Frelon4M 2k x 2k CCD camera
DOUBLE SI(111)monochromator
NINE AVALANCHE PHOTODIODE (APD) DETECTORS (SI BASED)
2006-11-07
APD
DOUBLE SI(111)
SINGLE WAVELENGTH
M
x-ray
1
DOUBLE SI(111)
SINGLE WAVELENGTH
M
x-ray
1
1.29967
1.0
0.53395
1.0
ID13
ESRF
1.29967, 0.53395
SYNCHROTRON
ESRF BEAMLINE ID13
2339.645
Insulin A chain
2
nat
polymer
3403.927
Insulin B chain
2
nat
polymer
65.409
ZINC ION
2
syn
non-polymer
18.015
water
44
nat
water
no
no
GIVEQCCASVCSLYQLENYCN
GIVEQCCASVCSLYQLENYCN
A,C
polypeptide(L)
no
no
FVNQHLCGSHLVEALYLVCGERGFFYTPKA
FVNQHLCGSHLVEALYLVCGERGFFYTPKA
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Bovine
sample
9913
Bos taurus
Bovine
sample
9913
Bos taurus
Batch
6
polycrystalline samples of T6 hexameric insulin (Zn2[(AB)2]3, the pH was adjusted by mixing different ratios of 0.2M solutions of sodium monobasic monohydrate phosphate and potassium phosphate., Batch, temperature 295K
295
repository
Initial release
1
0
2013-06-05
REFINEMENT.
PROGRAM : GSAS
AUTHORS : LARSON & VON DREELE
DATA USED IN REFINEMENT
RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69
RESOLUTION RANGE LOW (ANGSTROMS) : 18.18
POWDER DIFFRACTION DATA.
FIT TO DATA USED IN REFINEMENT
NUMBER OF POWDER PATTERNS : 14
PROFILE R VALUES (%) : 7.06 7.85 8.54 7.50 9.13
WEIGHTED PROFILE R VALUES (%) : 9.37 10.00 11.16 9.44 11.37
F**2 R VALUES (%) : 25.05 31.98 18.03 35.26 33.68
NUMBERS OF POWDER PATTERN POINTS : 8999 8999 8999 6750 6750
NUMBERS OF REFLECTIONS : 2138 2118 2138 2138 2118
TOTAL NUMBER OF POWDER POINTS :120575
NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
PROTEIN ATOMS : 800
NUCLEIC ACID ATOMS : NULL
HETEROGEN ATOMS : 2
SOLVENT ATOMS : 44
MODEL REFINEMENT.
NUMBER OF LEAST-SQUARES PARAMETERS : 1102
NUMBER OF RESTRAINTS : 1542
LEAST-SQUARES MATRIX BAND WIDTH : 50
RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. NUMBER.
BOND ANGLES (DEG) : 1.75 306
INTERATOMIC DISTANCES (A) :0.029 220
CHIRAL VOLUMES (A**3) :0.089 98
DISTANCES FROM RESTRAINT PLANES (A) :0.026 102
TORSION PSEUDOPOTENTIAL RESTRAINTS (E) : 3.49 135
TORSION ANGLE RESTRAINTS (E) : 0.84 290
ANTI-BUMPING DISTANCE RESTRAINTS (A) :0.505 286
HYDROGEN BOND DISTANCE RESTRAINTS (A) :0.119 80
EXPERIMENTAL DETAILS
EXPERIMENT TYPE : X-RAY POWDER DIFFRACTION
DATE OF DATA COLLECTION : 07-NOV-2006
TEMPERATURE (KELVIN) : 295
PH : NULL
SAMPLE HOLDER : 1.0MM GLASS CAPILLARY
NUMBER OF CRYSTALS USED : POLYCRYSTAL SLURRY
SYNCHROTRON (Y/N) : Y
RADIATION SOURCE : ESRF
BEAMLINE : ID31, ID11
X-RAY GENERATOR MODEL : NULL
MONOCHROMATIC OR LAUE (M/L) : M
WAVELENGTH OR RANGE (A) : 1.29967(9), 0.53395(20)
MONOCHROMATOR : DOUBLE SI(111)
ANALYZER : SI(111)
DETECTOR TYPE : NINE AVALANCHE PHOTODIODE (APD) DE
DETECTOR MANUFACTURER : NULL
INTENSITY-INTEGRATION SOFTWARE : NULL
DATA SCALING/ INTEGRATION SOFTWARE : ID31SUM, FIT2D
SOFTWARE USED: GSAS
STARTING MODEL: NULL
RCSB
Y
PDBJ
2012-12-13
REL
REL
ZN
ZINC ION
HOH
water
ZN
501
3
ZN
ZN
501
B
ZN
502
3
ZN
ZN
101
D
HOH
605
4
HOH
HOH
101
A
HOH
616
4
HOH
HOH
102
A
HOH
622
4
HOH
HOH
103
A
HOH
632
4
HOH
HOH
104
A
HOH
635
4
HOH
HOH
105
A
HOH
639
4
HOH
HOH
106
A
HOH
643
4
HOH
HOH
107
A
HOH
647
4
HOH
HOH
108
A
HOH
621
4
HOH
HOH
601
B
HOH
638
4
HOH
HOH
602
B
HOH
503
4
HOH
HOH
603
B
HOH
603
4
HOH
HOH
604
B
HOH
604
4
HOH
HOH
605
B
HOH
612
4
HOH
HOH
606
B
HOH
613
4
HOH
HOH
607
B
HOH
615
4
HOH
HOH
608
B
HOH
619
4
HOH
HOH
609
B
HOH
620
4
HOH
HOH
610
B
HOH
624
4
HOH
HOH
611
B
HOH
631
4
HOH
HOH
612
B
HOH
644
4
HOH
HOH
613
B
HOH
645
4
HOH
HOH
614
B
HOH
646
4
HOH
HOH
615
B
HOH
650
4
HOH
HOH
616
B
HOH
653
4
HOH
HOH
617
B
HOH
654
4
HOH
HOH
618
B
HOH
617
4
HOH
HOH
619
B
HOH
633
4
HOH
HOH
620
B
HOH
608
4
HOH
HOH
101
C
HOH
651
4
HOH
HOH
102
C
HOH
652
4
HOH
HOH
103
C
HOH
627
4
HOH
HOH
104
C
HOH
641
4
HOH
HOH
105
C
HOH
648
4
HOH
HOH
201
D
HOH
504
4
HOH
HOH
202
D
HOH
601
4
HOH
HOH
203
D
HOH
609
4
HOH
HOH
204
D
HOH
611
4
HOH
HOH
205
D
HOH
614
4
HOH
HOH
206
D
HOH
623
4
HOH
HOH
207
D
HOH
625
4
HOH
HOH
208
D
HOH
628
4
HOH
HOH
209
D
HOH
630
4
HOH
HOH
210
D
HOH
640
4
HOH
HOH
211
D
GLY
1
n
1
GLY
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
GLU
4
n
4
GLU
4
A
GLN
5
n
5
GLN
5
A
CYS
6
n
6
CYS
6
A
CYS
7
n
7
CYS
7
A
ALA
8
n
8
ALA
8
A
SER
9
n
9
SER
9
A
VAL
10
n
10
VAL
10
A
CYS
11
n
11
CYS
11
A
SER
12
n
12
SER
12
A
LEU
13
n
13
LEU
13
A
TYR
14
n
14
TYR
14
A
GLN
15
n
15
GLN
15
A
LEU
16
n
16
LEU
16
A
GLU
17
n
17
GLU
17
A
ASN
18
n
18
ASN
18
A
TYR
19
n
19
TYR
19
A
CYS
20
n
20
CYS
20
A
ASN
21
n
21
ASN
21
A
PHE
1
n
1
PHE
1
B
VAL
2
n
2
VAL
2
B
ASN
3
n
3
ASN
3
B
GLN
4
n
4
GLN
4
B
HIS
5
n
5
HIS
5
B
LEU
6
n
6
LEU
6
B
CYS
7
n
7
CYS
7
B
GLY
8
n
8
GLY
8
B
SER
9
n
9
SER
9
B
HIS
10
n
10
HIS
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
GLU
13
n
13
GLU
13
B
ALA
14
n
14
ALA
14
B
LEU
15
n
15
LEU
15
B
TYR
16
n
16
TYR
16
B
LEU
17
n
17
LEU
17
B
VAL
18
n
18
VAL
18
B
CYS
19
n
19
CYS
19
B
GLY
20
n
20
GLY
20
B
GLU
21
n
21
GLU
21
B
ARG
22
n
22
ARG
22
B
GLY
23
n
23
GLY
23
B
PHE
24
n
24
PHE
24
B
PHE
25
n
25
PHE
25
B
TYR
26
n
26
TYR
26
B
THR
27
n
27
THR
27
B
PRO
28
n
28
PRO
28
B
LYS
29
n
29
LYS
29
B
ALA
30
n
30
ALA
30
B
GLY
1
n
1
GLY
1
C
ILE
2
n
2
ILE
2
C
VAL
3
n
3
VAL
3
C
GLU
4
n
4
GLU
4
C
GLN
5
n
5
GLN
5
C
CYS
6
n
6
CYS
6
C
CYS
7
n
7
CYS
7
C
ALA
8
n
8
ALA
8
C
SER
9
n
9
SER
9
C
VAL
10
n
10
VAL
10
C
CYS
11
n
11
CYS
11
C
SER
12
n
12
SER
12
C
LEU
13
n
13
LEU
13
C
TYR
14
n
14
TYR
14
C
GLN
15
n
15
GLN
15
C
LEU
16
n
16
LEU
16
C
GLU
17
n
17
GLU
17
C
ASN
18
n
18
ASN
18
C
TYR
19
n
19
TYR
19
C
CYS
20
n
20
CYS
20
C
ASN
21
n
21
ASN
21
C
PHE
1
n
1
PHE
1
D
VAL
2
n
2
VAL
2
D
ASN
3
n
3
ASN
3
D
GLN
4
n
4
GLN
4
D
HIS
5
n
5
HIS
5
D
LEU
6
n
6
LEU
6
D
CYS
7
n
7
CYS
7
D
GLY
8
n
8
GLY
8
D
SER
9
n
9
SER
9
D
HIS
10
n
10
HIS
10
D
LEU
11
n
11
LEU
11
D
VAL
12
n
12
VAL
12
D
GLU
13
n
13
GLU
13
D
ALA
14
n
14
ALA
14
D
LEU
15
n
15
LEU
15
D
TYR
16
n
16
TYR
16
D
LEU
17
n
17
LEU
17
D
VAL
18
n
18
VAL
18
D
CYS
19
n
19
CYS
19
D
GLY
20
n
20
GLY
20
D
GLU
21
n
21
GLU
21
D
ARG
22
n
22
ARG
22
D
GLY
23
n
23
GLY
23
D
PHE
24
n
24
PHE
24
D
PHE
25
n
25
PHE
25
D
TYR
26
n
26
TYR
26
D
THR
27
n
27
THR
27
D
PRO
28
n
28
PRO
28
D
LYS
29
n
29
LYS
29
D
ALA
30
n
30
ALA
30
D
author_and_software_defined_assembly
PISA
6
hexameric
author_and_software_defined_assembly
PISA
6
hexameric
5390
-98
10970
5680
-100
10440
D
HIS
10
D
NE2
HIS
10
1_555
D
ZN
101
F
ZN
ZN
1_555
D
HOH
202
J
O
HOH
1_555
120.2
B
HIS
10
B
NE2
HIS
10
1_555
B
ZN
501
E
ZN
ZN
1_555
B
HOH
603
H
O
HOH
1_555
114.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
B
N
TYR
26
B
N
TYR
26
D
O
PHE
24
D
O
PHE
24
1
B
ZN
501
E
ZN
1
D
ZN
101
F
ZN
1
B
HOH
611
H
HOH
1
D
ALA
14
-11.48
1
B
B
CE1
CE1
HIS
HIS
10
10
1.57
1_555
2_555
1
D
D
CE1
CE1
HIS
HIS
10
10
2.03
1_555
2_555
1
B
B
CE1
NE2
HIS
HIS
10
10
2.18
1_555
2_555
1
A
SER
9
-124.80
-157.84
1
B
CYS
19
-66.63
-84.90
2.7
18.2
4IDW
2140
2140
3
3
1
70
data collection
ID31sum
phasing
MOLREP
refinement
GSAS
data reduction
FIT2D
data scaling
ID31sum
Insulin A chain, Insulin B chain
Polycrystalline T6 Bovine Insulin: Anisotropic Lattice Evolution and Novel Structure Refinement Strategy
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
GLY
1
A
GLY
1
HELX_P
A
SER
9
A
SER
9
1
1
9
A
SER
12
A
SER
12
HELX_P
A
ASN
18
A
ASN
18
1
2
7
B
GLY
8
B
GLY
8
HELX_P
B
CYS
19
B
CYS
19
1
3
12
C
ILE
2
C
ILE
2
HELX_P
C
CYS
7
C
CYS
7
1
4
6
C
SER
12
C
SER
12
HELX_P
C
ASN
18
C
ASN
18
1
5
7
D
GLY
8
D
GLY
8
HELX_P
D
GLY
20
D
GLY
20
1
6
13
D
GLU
21
D
GLU
21
HELX_P
D
GLY
23
D
GLY
23
5
7
3
disulf
2.038
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
11
A
SG
CYS
11
1_555
disulf
2.040
A
CYS
7
A
SG
CYS
7
1_555
B
CYS
7
B
SG
CYS
7
1_555
disulf
2.040
A
CYS
20
A
SG
CYS
20
1_555
B
CYS
19
B
SG
CYS
19
1_555
disulf
2.038
C
CYS
6
C
SG
CYS
6
1_555
C
CYS
11
C
SG
CYS
11
1_555
disulf
2.039
C
CYS
7
C
SG
CYS
7
1_555
D
CYS
7
D
SG
CYS
7
1_555
disulf
2.041
C
CYS
20
C
SG
CYS
20
1_555
D
CYS
19
D
SG
CYS
19
1_555
metalc
2.084
D
HIS
10
D
NE2
HIS
10
1_555
D
ZN
101
F
ZN
ZN
1_555
metalc
2.200
B
HIS
10
B
NE2
HIS
10
1_555
B
ZN
501
E
ZN
ZN
1_555
metalc
2.402
D
ZN
101
F
ZN
ZN
1_555
D
HOH
202
J
O
HOH
1_555
metalc
2.405
B
ZN
501
E
ZN
ZN
1_555
B
HOH
603
H
O
HOH
1_555
HORMONE
HORMONE, INSULIN FAMILY, CARBOHYDRATE METABOLISM, HORMONE-GROWTH, T6 Bovine Insulin
INS_BOVIN
UNP
1
85
P01317
GIVEQCCASVCSLYQLENYCN
INS_BOVIN
UNP
2
25
P01317
FVNQHLCGSHLVEALYLVCGERGFFYTPKA
85
105
4IDW
1
21
P01317
A
1
1
21
25
54
4IDW
1
30
P01317
B
2
1
30
85
105
4IDW
1
21
P01317
C
1
1
21
25
54
4IDW
1
30
P01317
D
2
1
30
2
anti-parallel
B
PHE
24
B
PHE
24
B
TYR
26
B
TYR
26
D
PHE
24
D
PHE
24
D
TYR
26
D
TYR
26
BINDING SITE FOR RESIDUE ZN B 501
Software
2
BINDING SITE FOR RESIDUE ZN D 101
Software
2
B
HIS
10
B
HIS
10
2
1_555
B
HOH
603
H
HOH
2
1_555
D
HIS
10
D
HIS
10
2
1_555
D
HOH
202
J
HOH
2
1_555
146
H 3