0.005901
0.003407
0.000000
0.000000
0.006814
0.000000
0.000000
0.000000
0.010832
0.00000
0.00000
0.00000
Biswas, T.
Furman, R.
Artsimovitch, I.
Tsodikov, O.V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
36
90.00
90.00
120.00
169.453
169.453
92.320
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
Febs Lett.
FEBLAL
0165
0014-5793
587
614
619
10.1016/j.febslet.2013.01.073
23416301
DksA2, a zinc-independent structural analog of the transcription factor DksA.
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2010-04-25
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
21-ID-D
APS
1.0
SYNCHROTRON
APS BEAMLINE 21-ID-D
16234.214
Putative C4-type zinc finger protein, DksA/TraR family
3
man
polymer
96.063
SULFATE ION
3
syn
non-polymer
18.015
water
21
nat
water
no
no
GHMAEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLL
DKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
GHMAEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLL
DKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
UCBPP-PA14
sample
PA14_73020
208963
Pseudomonas aeruginosa
562
Escherichia coli
1
3.93
68.69
VAPOR DIFFUSION, SITTING DROP
7.5
100 mM Hepes pH 7.5, 100 mM ammonium sulfate, 16.5% PEG 8000, VAPOR DIFFUSION, SITTING DROP, temperature 295K
295
repository
Initial release
Database references
1
0
2013-02-27
1
1
2013-03-27
RCSB
Y
RCSB
2012-12-21
REL
REL
SO4
SULFATE ION
HOH
water
SO4
2
2
SO4
SO4
201
A
SO4
1
2
SO4
SO4
201
B
SO4
3
2
SO4
SO4
201
C
HOH
6
3
HOH
HOH
301
A
HOH
7
3
HOH
HOH
302
A
HOH
13
3
HOH
HOH
303
A
HOH
22
3
HOH
HOH
304
A
HOH
126
3
HOH
HOH
305
A
HOH
142
3
HOH
HOH
306
A
HOH
155
3
HOH
HOH
307
A
HOH
159
3
HOH
HOH
308
A
HOH
37
3
HOH
HOH
301
B
HOH
41
3
HOH
HOH
302
B
HOH
111
3
HOH
HOH
303
B
HOH
121
3
HOH
HOH
304
B
HOH
129
3
HOH
HOH
305
B
HOH
136
3
HOH
HOH
306
B
HOH
170
3
HOH
HOH
307
B
HOH
71
3
HOH
HOH
301
C
HOH
89
3
HOH
HOH
302
C
HOH
122
3
HOH
HOH
303
C
HOH
143
3
HOH
HOH
304
C
HOH
153
3
HOH
HOH
305
C
HOH
165
3
HOH
HOH
306
C
n
1
-1
A
n
2
0
A
n
3
1
A
ALA
2
n
4
ALA
2
A
GLU
3
n
5
GLU
3
A
GLN
4
n
6
GLN
4
A
GLU
5
n
7
GLU
5
A
LEU
6
n
8
LEU
6
A
LEU
7
n
9
LEU
7
A
ALA
8
n
10
ALA
8
A
GLN
9
n
11
GLN
9
A
PRO
10
n
12
PRO
10
A
ASP
11
n
13
ASP
11
A
ALA
12
n
14
ALA
12
A
ALA
13
n
15
ALA
13
A
TYR
14
n
16
TYR
14
A
MET
15
n
17
MET
15
A
ASP
16
n
18
ASP
16
A
GLU
17
n
19
GLU
17
A
ALA
18
n
20
ALA
18
A
GLN
19
n
21
GLN
19
A
GLN
20
n
22
GLN
20
A
ALA
21
n
23
ASP
21
A
PHE
22
n
24
PHE
22
A
PHE
23
n
25
PHE
23
A
ARG
24
n
26
ARG
24
A
ASP
25
n
27
ASP
25
A
LEU
26
n
28
LEU
26
A
LEU
27
n
29
LEU
27
A
LEU
28
n
30
LEU
28
A
ARG
29
n
31
ARG
29
A
GLN
30
n
32
GLN
30
A
ARG
31
n
33
ARG
31
A
GLN
32
n
34
GLN
32
A
GLU
33
n
35
GLU
33
A
LEU
34
n
36
LEU
34
A
GLN
35
n
37
GLN
35
A
ALA
36
n
38
ALA
36
A
ARG
37
n
39
ARG
37
A
ILE
38
n
40
ILE
38
A
GLU
39
n
41
GLU
39
A
GLY
40
n
42
GLY
40
A
GLU
41
n
43
GLU
41
A
PHE
42
n
44
PHE
42
A
GLY
43
n
45
GLY
43
A
GLU
44
n
46
GLU
44
A
LEU
45
n
47
LEU
45
A
ARG
46
n
48
ARG
46
A
ASP
47
n
49
ASP
47
A
LEU
48
n
50
LEU
48
A
GLU
49
n
51
GLU
49
A
ARG
50
n
52
ARG
50
A
PRO
51
n
53
PRO
51
A
SER
52
n
54
SER
52
A
ASP
53
n
55
ASP
53
A
GLU
54
n
56
GLU
54
A
ALA
55
n
57
ALA
55
A
ASP
56
n
58
ASP
56
A
LEU
57
n
59
LEU
57
A
ALA
58
n
60
ALA
58
A
SER
59
n
61
SER
59
A
ARG
60
n
62
ARG
60
A
GLU
61
n
63
GLU
61
A
GLU
62
n
64
GLU
62
A
GLN
63
n
65
GLN
63
A
ARG
64
n
66
ARG
64
A
GLN
65
n
67
GLN
65
A
TRP
66
n
68
TRP
66
A
GLN
67
n
69
GLN
67
A
LEU
68
n
70
LEU
68
A
ARG
69
n
71
ARG
69
A
LEU
70
n
72
LEU
70
A
LEU
71
n
73
LEU
71
A
GLU
72
n
74
GLU
72
A
ARG
73
n
75
ARG
73
A
GLU
74
n
76
GLU
74
A
LYS
75
n
77
LYS
75
A
LYS
76
n
78
LYS
76
A
LEU
77
n
79
LEU
77
A
LEU
78
n
80
LEU
78
A
ASP
79
n
81
ASP
79
A
LYS
80
n
82
LYS
80
A
ILE
81
n
83
ILE
81
A
ASP
82
n
84
ASP
82
A
GLU
83
n
85
GLU
83
A
ALA
84
n
86
ALA
84
A
LEU
85
n
87
LEU
85
A
GLU
86
n
88
GLU
86
A
ARG
87
n
89
ARG
87
A
LEU
88
n
90
LEU
88
A
ALA
89
n
91
ALA
89
A
ARG
90
n
92
ARG
90
A
GLY
91
n
93
GLY
91
A
ASP
92
n
94
ASP
92
A
TYR
93
n
95
TYR
93
A
GLY
94
n
96
GLY
94
A
TRP
95
n
97
TRP
95
A
CYS
96
n
98
CYS
96
A
GLN
97
n
99
GLN
97
A
GLU
98
n
100
GLU
98
A
THR
99
n
101
THR
99
A
GLY
100
n
102
GLY
100
A
GLU
101
n
103
GLU
101
A
PRO
102
n
104
PRO
102
A
ILE
103
n
105
ILE
103
A
GLY
104
n
106
GLY
104
A
LEU
105
n
107
LEU
105
A
ARG
106
n
108
ARG
106
A
ARG
107
n
109
ARG
107
A
LEU
108
n
110
LEU
108
A
LEU
109
n
111
LEU
109
A
LEU
110
n
112
LEU
110
A
ARG
111
n
113
ARG
111
A
PRO
112
n
114
PRO
112
A
THR
113
n
115
THR
113
A
ALA
114
n
116
ALA
114
A
THR
115
n
117
THR
115
A
LEU
116
n
118
LEU
116
A
CYS
117
n
119
CYS
117
A
ILE
118
n
120
ILE
118
A
GLU
119
n
121
GLU
119
A
ALA
120
n
122
ALA
120
A
LYS
121
n
123
LYS
121
A
GLU
122
n
124
GLU
122
A
ARG
123
n
125
ARG
123
A
GLN
124
n
126
GLN
124
A
GLU
125
n
127
GLU
125
A
LYS
126
n
128
LYS
126
A
ARG
127
n
129
ARG
127
A
GLU
128
n
130
GLU
128
A
ARG
129
n
131
ARG
129
A
HIS
130
n
132
HIS
130
A
n
133
131
A
n
134
132
A
n
135
133
A
n
136
134
A
n
1
-1
B
n
2
0
B
MET
1
n
3
MET
1
B
ALA
2
n
4
ALA
2
B
GLU
3
n
5
GLU
3
B
GLN
4
n
6
GLN
4
B
GLU
5
n
7
GLU
5
B
LEU
6
n
8
LEU
6
B
LEU
7
n
9
LEU
7
B
ALA
8
n
10
ALA
8
B
GLN
9
n
11
GLN
9
B
PRO
10
n
12
PRO
10
B
ASP
11
n
13
ASP
11
B
ALA
12
n
14
ALA
12
B
ALA
13
n
15
ALA
13
B
TYR
14
n
16
TYR
14
B
MET
15
n
17
MET
15
B
ASP
16
n
18
ASP
16
B
GLU
17
n
19
GLU
17
B
ALA
18
n
20
ALA
18
B
GLN
19
n
21
GLN
19
B
GLN
20
n
22
GLN
20
B
ALA
21
n
23
ASP
21
B
PHE
22
n
24
PHE
22
B
PHE
23
n
25
PHE
23
B
ARG
24
n
26
ARG
24
B
ASP
25
n
27
ASP
25
B
LEU
26
n
28
LEU
26
B
LEU
27
n
29
LEU
27
B
LEU
28
n
30
LEU
28
B
ARG
29
n
31
ARG
29
B
GLN
30
n
32
GLN
30
B
ARG
31
n
33
ARG
31
B
GLN
32
n
34
GLN
32
B
GLU
33
n
35
GLU
33
B
LEU
34
n
36
LEU
34
B
GLN
35
n
37
GLN
35
B
ALA
36
n
38
ALA
36
B
ARG
37
n
39
ARG
37
B
ILE
38
n
40
ILE
38
B
GLU
39
n
41
GLU
39
B
GLY
40
n
42
GLY
40
B
GLU
41
n
43
GLU
41
B
PHE
42
n
44
PHE
42
B
GLY
43
n
45
GLY
43
B
GLU
44
n
46
GLU
44
B
LEU
45
n
47
LEU
45
B
ARG
46
n
48
ARG
46
B
ASP
47
n
49
ASP
47
B
LEU
48
n
50
LEU
48
B
GLU
49
n
51
GLU
49
B
ARG
50
n
52
ARG
50
B
PRO
51
n
53
PRO
51
B
SER
52
n
54
SER
52
B
ASP
53
n
55
ASP
53
B
GLU
54
n
56
GLU
54
B
ALA
55
n
57
ALA
55
B
ASP
56
n
58
ASP
56
B
LEU
57
n
59
LEU
57
B
ALA
58
n
60
ALA
58
B
SER
59
n
61
SER
59
B
ARG
60
n
62
ARG
60
B
GLU
61
n
63
GLU
61
B
GLU
62
n
64
GLU
62
B
GLN
63
n
65
GLN
63
B
ARG
64
n
66
ARG
64
B
GLN
65
n
67
GLN
65
B
TRP
66
n
68
TRP
66
B
GLN
67
n
69
GLN
67
B
LEU
68
n
70
LEU
68
B
ARG
69
n
71
ARG
69
B
LEU
70
n
72
LEU
70
B
LEU
71
n
73
LEU
71
B
GLU
72
n
74
GLU
72
B
ARG
73
n
75
ARG
73
B
GLU
74
n
76
GLU
74
B
LYS
75
n
77
LYS
75
B
LYS
76
n
78
LYS
76
B
LEU
77
n
79
LEU
77
B
LEU
78
n
80
LEU
78
B
ASP
79
n
81
ASP
79
B
LYS
80
n
82
LYS
80
B
ILE
81
n
83
ILE
81
B
ASP
82
n
84
ASP
82
B
GLU
83
n
85
GLU
83
B
ALA
84
n
86
ALA
84
B
LEU
85
n
87
LEU
85
B
GLU
86
n
88
GLU
86
B
ARG
87
n
89
ARG
87
B
LEU
88
n
90
LEU
88
B
ALA
89
n
91
ALA
89
B
ARG
90
n
92
ARG
90
B
GLY
91
n
93
GLY
91
B
ASP
92
n
94
ASP
92
B
TYR
93
n
95
TYR
93
B
GLY
94
n
96
GLY
94
B
TRP
95
n
97
TRP
95
B
CYS
96
n
98
CYS
96
B
GLN
97
n
99
GLN
97
B
GLU
98
n
100
GLU
98
B
THR
99
n
101
THR
99
B
GLY
100
n
102
GLY
100
B
GLU
101
n
103
GLU
101
B
PRO
102
n
104
PRO
102
B
ILE
103
n
105
ILE
103
B
GLY
104
n
106
GLY
104
B
LEU
105
n
107
LEU
105
B
ARG
106
n
108
ARG
106
B
ARG
107
n
109
ARG
107
B
LEU
108
n
110
LEU
108
B
LEU
109
n
111
LEU
109
B
LEU
110
n
112
LEU
110
B
ARG
111
n
113
ARG
111
B
PRO
112
n
114
PRO
112
B
THR
113
n
115
THR
113
B
ALA
114
n
116
ALA
114
B
THR
115
n
117
THR
115
B
LEU
116
n
118
LEU
116
B
CYS
117
n
119
CYS
117
B
ILE
118
n
120
ILE
118
B
GLU
119
n
121
GLU
119
B
ALA
120
n
122
ALA
120
B
LYS
121
n
123
LYS
121
B
GLU
122
n
124
GLU
122
B
ARG
123
n
125
ARG
123
B
GLN
124
n
126
GLN
124
B
GLU
125
n
127
GLU
125
B
LYS
126
n
128
LYS
126
B
ARG
127
n
129
ARG
127
B
GLU
128
n
130
GLU
128
B
ARG
129
n
131
ARG
129
B
HIS
130
n
132
HIS
130
B
n
133
131
B
n
134
132
B
n
135
133
B
n
136
134
B
n
1
-1
C
n
2
0
C
n
3
1
C
ALA
2
n
4
ALA
2
C
GLU
3
n
5
GLU
3
C
GLN
4
n
6
GLN
4
C
GLU
5
n
7
GLU
5
C
LEU
6
n
8
LEU
6
C
LEU
7
n
9
LEU
7
C
ALA
8
n
10
ALA
8
C
GLN
9
n
11
GLN
9
C
PRO
10
n
12
PRO
10
C
ASP
11
n
13
ASP
11
C
ALA
12
n
14
ALA
12
C
ALA
13
n
15
ALA
13
C
TYR
14
n
16
TYR
14
C
MET
15
n
17
MET
15
C
ASP
16
n
18
ASP
16
C
GLU
17
n
19
GLU
17
C
ALA
18
n
20
ALA
18
C
GLN
19
n
21
GLN
19
C
GLN
20
n
22
GLN
20
C
ALA
21
n
23
ASP
21
C
PHE
22
n
24
PHE
22
C
PHE
23
n
25
PHE
23
C
ARG
24
n
26
ARG
24
C
ASP
25
n
27
ASP
25
C
LEU
26
n
28
LEU
26
C
LEU
27
n
29
LEU
27
C
LEU
28
n
30
LEU
28
C
ARG
29
n
31
ARG
29
C
GLN
30
n
32
GLN
30
C
ARG
31
n
33
ARG
31
C
GLN
32
n
34
GLN
32
C
GLU
33
n
35
GLU
33
C
LEU
34
n
36
LEU
34
C
GLN
35
n
37
GLN
35
C
ALA
36
n
38
ALA
36
C
ARG
37
n
39
ARG
37
C
ILE
38
n
40
ILE
38
C
GLU
39
n
41
GLU
39
C
GLY
40
n
42
GLY
40
C
GLU
41
n
43
GLU
41
C
PHE
42
n
44
PHE
42
C
GLY
43
n
45
GLY
43
C
GLU
44
n
46
GLU
44
C
LEU
45
n
47
LEU
45
C
ARG
46
n
48
ARG
46
C
ASP
47
n
49
ASP
47
C
LEU
48
n
50
LEU
48
C
GLU
49
n
51
GLU
49
C
ARG
50
n
52
ARG
50
C
PRO
51
n
53
PRO
51
C
SER
52
n
54
SER
52
C
ASP
53
n
55
ASP
53
C
GLU
54
n
56
GLU
54
C
ALA
55
n
57
ALA
55
C
ASP
56
n
58
ASP
56
C
LEU
57
n
59
LEU
57
C
ALA
58
n
60
ALA
58
C
SER
59
n
61
SER
59
C
ARG
60
n
62
ARG
60
C
GLU
61
n
63
GLU
61
C
GLU
62
n
64
GLU
62
C
GLN
63
n
65
GLN
63
C
ARG
64
n
66
ARG
64
C
GLN
65
n
67
GLN
65
C
TRP
66
n
68
TRP
66
C
GLN
67
n
69
GLN
67
C
LEU
68
n
70
LEU
68
C
ARG
69
n
71
ARG
69
C
LEU
70
n
72
LEU
70
C
LEU
71
n
73
LEU
71
C
GLU
72
n
74
GLU
72
C
ARG
73
n
75
ARG
73
C
GLU
74
n
76
GLU
74
C
LYS
75
n
77
LYS
75
C
LYS
76
n
78
LYS
76
C
LEU
77
n
79
LEU
77
C
LEU
78
n
80
LEU
78
C
ASP
79
n
81
ASP
79
C
LYS
80
n
82
LYS
80
C
ILE
81
n
83
ILE
81
C
ASP
82
n
84
ASP
82
C
GLU
83
n
85
GLU
83
C
ALA
84
n
86
ALA
84
C
LEU
85
n
87
LEU
85
C
GLU
86
n
88
GLU
86
C
ARG
87
n
89
ARG
87
C
LEU
88
n
90
LEU
88
C
ALA
89
n
91
ALA
89
C
ARG
90
n
92
ARG
90
C
GLY
91
n
93
GLY
91
C
ASP
92
n
94
ASP
92
C
TYR
93
n
95
TYR
93
C
GLY
94
n
96
GLY
94
C
TRP
95
n
97
TRP
95
C
CYS
96
n
98
CYS
96
C
GLN
97
n
99
GLN
97
C
GLU
98
n
100
GLU
98
C
THR
99
n
101
THR
99
C
GLY
100
n
102
GLY
100
C
GLU
101
n
103
GLU
101
C
PRO
102
n
104
PRO
102
C
ILE
103
n
105
ILE
103
C
GLY
104
n
106
GLY
104
C
LEU
105
n
107
LEU
105
C
ARG
106
n
108
ARG
106
C
ARG
107
n
109
ARG
107
C
LEU
108
n
110
LEU
108
C
LEU
109
n
111
LEU
109
C
LEU
110
n
112
LEU
110
C
ARG
111
n
113
ARG
111
C
PRO
112
n
114
PRO
112
C
THR
113
n
115
THR
113
C
ALA
114
n
116
ALA
114
C
THR
115
n
117
THR
115
C
LEU
116
n
118
LEU
116
C
CYS
117
n
119
CYS
117
C
ILE
118
n
120
ILE
118
C
GLU
119
n
121
GLU
119
C
ALA
120
n
122
ALA
120
C
LYS
121
n
123
LYS
121
C
GLU
122
n
124
GLU
122
C
ARG
123
n
125
ARG
123
C
GLN
124
n
126
GLN
124
C
GLU
125
n
127
GLU
125
C
LYS
126
n
128
LYS
126
C
ARG
127
n
129
ARG
127
C
GLU
128
n
130
GLU
128
C
ARG
129
n
131
ARG
129
C
HIS
130
n
132
HIS
130
C
n
133
131
C
n
134
132
C
n
135
133
C
n
136
134
C
4.5163
2.9621
0.0778
5.9953
0.2458
2.0232
0.0011
0.3038
0.0985
0.5801
0.2589
0.7992
0.1823
-0.9083
-0.2599
-0.1662
-0.0427
0.1583
-0.2676
0.0531
-0.2963
refined
64.5239
-7.9035
-18.7645
X-RAY DIFFRACTION
4.8270
-0.7296
-2.3867
2.6502
1.6672
6.2607
0.2303
-0.2248
-0.3081
0.5663
-0.1633
0.2989
0.1686
-0.1407
-0.0670
-0.0720
-0.0669
-0.0503
-0.5968
0.1010
-0.3430
refined
76.8013
-24.1913
-23.3609
X-RAY DIFFRACTION
2.0075
-0.7695
0.6523
6.7904
-3.5685
5.9010
-0.1671
0.3355
-0.1601
-0.0684
-0.0085
0.7269
0.2380
-0.7606
0.1756
-0.3268
-0.3311
0.0929
-0.1502
-0.0113
-0.1150
refined
58.7980
-21.4078
-34.1032
X-RAY DIFFRACTION
A
2
A
130
X-RAY DIFFRACTION
1
B
1
B
130
X-RAY DIFFRACTION
2
C
2
C
130
X-RAY DIFFRACTION
3
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
GLN
9
A
CG
GLN
11
1
Y
1
A
CD
GLN
9
A
CD
GLN
11
1
Y
1
A
OE1
GLN
9
A
OE1
GLN
11
1
Y
1
A
NE2
GLN
9
A
NE2
GLN
11
1
Y
1
A
CG
ASP
21
A
CG
ASP
23
1
Y
1
A
OD1
ASP
21
A
OD1
ASP
23
1
Y
1
A
OD2
ASP
21
A
OD2
ASP
23
1
Y
1
A
CG
ARG
46
A
CG
ARG
48
1
Y
1
A
CD
ARG
46
A
CD
ARG
48
1
Y
1
A
NE
ARG
46
A
NE
ARG
48
1
Y
1
A
CZ
ARG
46
A
CZ
ARG
48
1
Y
1
A
NH1
ARG
46
A
NH1
ARG
48
1
Y
1
A
NH2
ARG
46
A
NH2
ARG
48
1
Y
1
A
CG
ARG
50
A
CG
ARG
52
1
Y
1
A
CD
ARG
50
A
CD
ARG
52
1
Y
1
A
NE
ARG
50
A
NE
ARG
52
1
Y
1
A
CZ
ARG
50
A
CZ
ARG
52
1
Y
1
A
NH1
ARG
50
A
NH1
ARG
52
1
Y
1
A
NH2
ARG
50
A
NH2
ARG
52
1
Y
1
A
CG
ASP
56
A
CG
ASP
58
1
Y
1
A
OD1
ASP
56
A
OD1
ASP
58
1
Y
1
A
OD2
ASP
56
A
OD2
ASP
58
1
Y
1
A
CG
LEU
57
A
CG
LEU
59
1
Y
1
A
CD1
LEU
57
A
CD1
LEU
59
1
Y
1
A
CD2
LEU
57
A
CD2
LEU
59
1
Y
1
B
CG
GLN
9
B
CG
GLN
11
1
Y
1
B
CD
GLN
9
B
CD
GLN
11
1
Y
1
B
OE1
GLN
9
B
OE1
GLN
11
1
Y
1
B
NE2
GLN
9
B
NE2
GLN
11
1
Y
1
B
CG
ASP
21
B
CG
ASP
23
1
Y
1
B
OD1
ASP
21
B
OD1
ASP
23
1
Y
1
B
OD2
ASP
21
B
OD2
ASP
23
1
Y
1
B
CG
GLU
44
B
CG
GLU
46
1
Y
1
B
CD
GLU
44
B
CD
GLU
46
1
Y
1
B
OE1
GLU
44
B
OE1
GLU
46
1
Y
1
B
OE2
GLU
44
B
OE2
GLU
46
1
Y
1
B
CG
ARG
50
B
CG
ARG
52
1
Y
1
B
CD
ARG
50
B
CD
ARG
52
1
Y
1
B
NE
ARG
50
B
NE
ARG
52
1
Y
1
B
CZ
ARG
50
B
CZ
ARG
52
1
Y
1
B
NH1
ARG
50
B
NH1
ARG
52
1
Y
1
B
NH2
ARG
50
B
NH2
ARG
52
1
Y
1
B
CG
ASP
56
B
CG
ASP
58
1
Y
1
B
OD1
ASP
56
B
OD1
ASP
58
1
Y
1
B
OD2
ASP
56
B
OD2
ASP
58
1
Y
1
B
CG
LEU
57
B
CG
LEU
59
1
Y
1
B
CD1
LEU
57
B
CD1
LEU
59
1
Y
1
B
CD2
LEU
57
B
CD2
LEU
59
1
Y
1
C
CG
GLN
9
C
CG
GLN
11
1
Y
1
C
CD
GLN
9
C
CD
GLN
11
1
Y
1
C
OE1
GLN
9
C
OE1
GLN
11
1
Y
1
C
NE2
GLN
9
C
NE2
GLN
11
1
Y
1
C
CG
ASP
21
C
CG
ASP
23
1
Y
1
C
OD1
ASP
21
C
OD1
ASP
23
1
Y
1
C
OD2
ASP
21
C
OD2
ASP
23
1
Y
1
C
CG
GLU
44
C
CG
GLU
46
1
Y
1
C
CD
GLU
44
C
CD
GLU
46
1
Y
1
C
OE1
GLU
44
C
OE1
GLU
46
1
Y
1
C
OE2
GLU
44
C
OE2
GLU
46
1
Y
1
C
CG
ARG
50
C
CG
ARG
52
1
Y
1
C
CD
ARG
50
C
CD
ARG
52
1
Y
1
C
NE
ARG
50
C
NE
ARG
52
1
Y
1
C
CZ
ARG
50
C
CZ
ARG
52
1
Y
1
C
NH1
ARG
50
C
NH1
ARG
52
1
Y
1
C
NH2
ARG
50
C
NH2
ARG
52
1
Y
1
C
CG
ASP
56
C
CG
ASP
58
1
Y
1
C
OD1
ASP
56
C
OD1
ASP
58
1
Y
1
C
OD2
ASP
56
C
OD2
ASP
58
1
Y
1
C
CG
LEU
57
C
CG
LEU
59
1
Y
1
C
CD1
LEU
57
C
CD1
LEU
59
1
Y
1
C
CD2
LEU
57
C
CD2
LEU
59
1
Y
1
A
GLY
-1
A
GLY
1
1
Y
1
A
HIS
0
A
HIS
2
1
Y
1
A
MET
1
A
MET
3
1
Y
1
A
VAL
131
A
VAL
133
1
Y
1
A
ARG
132
A
ARG
134
1
Y
1
A
HIS
133
A
HIS
135
1
Y
1
A
ASN
134
A
ASN
136
1
Y
1
B
GLY
-1
B
GLY
1
1
Y
1
B
HIS
0
B
HIS
2
1
Y
1
B
VAL
131
B
VAL
133
1
Y
1
B
ARG
132
B
ARG
134
1
Y
1
B
HIS
133
B
HIS
135
1
Y
1
B
ASN
134
B
ASN
136
1
Y
1
C
GLY
-1
C
GLY
1
1
Y
1
C
HIS
0
C
HIS
2
1
Y
1
C
MET
1
C
MET
3
1
Y
1
C
VAL
131
C
VAL
133
1
Y
1
C
ARG
132
C
ARG
134
1
Y
1
C
HIS
133
C
HIS
135
1
Y
1
C
ASN
134
C
ASN
136
1
Y
1
A
PRO
10
-43.34
168.73
1
A
ASP
11
-131.54
-117.26
1
A
ALA
12
-80.37
40.52
1
A
ARG
46
-64.82
2.01
1
A
PRO
51
-30.67
115.96
1
A
GLU
98
-65.95
-74.14
1
A
GLU
101
-45.25
153.36
1
B
PRO
10
-68.75
-143.45
1
B
ASP
11
-160.09
-82.91
1
B
ARG
46
-74.47
23.23
1
B
SER
52
-133.49
-144.43
1
B
ARG
111
-151.78
84.86
1
B
ARG
129
-39.40
-30.84
1
C
ALA
8
-82.49
40.87
1
C
ALA
12
-141.86
23.10
1
C
PRO
51
-29.90
110.87
1
C
ALA
55
-48.50
-70.77
1
C
ALA
58
-136.06
-93.06
1
C
GLU
61
-57.45
10.45
94.567
5.07
2.53
0.00
5.07
0.00
-7.60
0.914
0.883
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.30953
0.25655
0.25922
3.25
40.00
611
12111
4.8
99.49
57.623
0.457
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.528
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
3.25
40.00
21
3213
15
0
3177
0.007
0.021
3229
1.080
1.992
4333
5.496
5.000
385
32.786
23.542
192
22.183
15.000
623
16.417
15.000
50
0.070
0.200
451
0.003
0.020
2499
0.222
0.200
1611
0.299
0.200
2192
0.142
0.200
135
0.169
0.200
37
0.177
0.200
8
0.276
1.500
1984
0.520
2.000
3044
0.687
3.000
1372
1.210
4.500
1289
0.404
0.330
3.334
38
838
20
95.42
3.25
50.0
4IJJ
12184
12111
2.0
1
99.4
data collection
HKL-2000
phasing
PHASER
refinement
REFMAC
5.2.0019
data reduction
HKL-2000
data scaling
HKL-2000
Putative C4-type zinc finger protein, DksA/TraR family
Structure of transcription factor DksA2 from Pseudomonas aeruginosa
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
A
ALA
2
A
ALA
4
HELX_P
A
ALA
8
A
ALA
10
1
1
7
A
ASP
16
A
ASP
18
HELX_P
A
GLU
44
A
GLU
46
1
2
29
A
ASP
56
A
ASP
58
HELX_P
A
GLY
91
A
GLY
93
1
3
36
A
GLY
104
A
GLY
106
HELX_P
A
ARG
111
A
ARG
113
1
4
8
A
CYS
117
A
CYS
119
HELX_P
A
ARG
129
A
ARG
131
1
5
13
B
GLU
3
B
GLU
5
HELX_P
B
ALA
8
B
ALA
10
1
6
6
B
ASP
16
B
ASP
18
HELX_P
B
GLU
49
B
GLU
51
1
7
34
B
ASP
53
B
ASP
55
HELX_P
B
ASP
56
B
ASP
58
5
8
4
B
LEU
57
B
LEU
59
HELX_P
B
ARG
90
B
ARG
92
1
9
34
B
GLY
104
B
GLY
106
HELX_P
B
ARG
111
B
ARG
113
1
10
8
B
CYS
117
B
CYS
119
HELX_P
B
LYS
126
B
LYS
128
1
11
10
C
GLU
3
C
GLU
5
HELX_P
C
ALA
8
C
ALA
10
1
12
6
C
ASP
16
C
ASP
18
HELX_P
C
GLU
49
C
GLU
51
1
13
34
C
SER
59
C
SER
61
HELX_P
C
ARG
90
C
ARG
92
1
14
32
C
GLY
104
C
GLY
106
HELX_P
C
ARG
111
C
ARG
113
1
15
8
C
CYS
117
C
CYS
119
HELX_P
C
LYS
126
C
LYS
128
1
16
10
disulf
2.079
A
CYS
96
A
SG
CYS
98
1_555
A
CYS
117
A
SG
CYS
119
1_555
HYDROLASE
DksA fold, transcription factor, RNA polymerase, disulfide bond, HYDROLASE
Q02DH2_PSEAB
UNP
1
1
Q02DH2
MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLLDK
IDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
1
134
4IJJ
1
134
Q02DH2
A
1
3
136
1
134
4IJJ
1
134
Q02DH2
B
1
3
136
1
134
4IJJ
1
134
Q02DH2
C
1
3
136
1
EXPRESSION TAG
GLY
-1
4IJJ
A
Q02DH2
UNP
1
1
EXPRESSION TAG
HIS
0
4IJJ
A
Q02DH2
UNP
2
1
THR
CONFLICT
ALA
2
4IJJ
A
Q02DH2
UNP
2
4
2
EXPRESSION TAG
GLY
-1
4IJJ
B
Q02DH2
UNP
1
2
EXPRESSION TAG
HIS
0
4IJJ
B
Q02DH2
UNP
2
2
THR
CONFLICT
ALA
2
4IJJ
B
Q02DH2
UNP
2
4
3
EXPRESSION TAG
GLY
-1
4IJJ
C
Q02DH2
UNP
1
3
EXPRESSION TAG
HIS
0
4IJJ
C
Q02DH2
UNP
2
3
THR
CONFLICT
ALA
2
4IJJ
C
Q02DH2
UNP
2
4
BINDING SITE FOR RESIDUE SO4 A 201
Software
3
BINDING SITE FOR RESIDUE SO4 B 201
Software
6
BINDING SITE FOR RESIDUE SO4 C 201
Software
6
A
ARG
111
A
ARG
113
3
1_555
A
THR
115
A
THR
117
3
1_555
A
LEU
116
A
LEU
118
3
1_555
B
ARG
111
B
ARG
113
6
1_555
B
THR
113
B
THR
115
6
1_555
B
ALA
114
B
ALA
116
6
1_555
B
THR
115
B
THR
117
6
1_555
B
LEU
116
B
LEU
118
6
1_555
C
ARG
46
C
ARG
48
6
1_555
C
LYS
80
C
LYS
82
6
1_555
C
ARG
111
C
ARG
113
6
1_555
C
THR
113
C
THR
115
6
1_555
C
ALA
114
C
ALA
116
6
1_555
C
THR
115
C
THR
117
6
1_555
C
LEU
116
C
LEU
118
6
1_555
177
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