0.005901 0.003407 0.000000 0.000000 0.006814 0.000000 0.000000 0.000000 0.010832 0.00000 0.00000 0.00000 Biswas, T. Furman, R. Artsimovitch, I. Tsodikov, O.V. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 36 90.00 90.00 120.00 169.453 169.453 92.320 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE Febs Lett. FEBLAL 0165 0014-5793 587 614 619 10.1016/j.febslet.2013.01.073 23416301 DksA2, a zinc-independent structural analog of the transcription factor DksA. 2013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2010-04-25 MARMOSAIC 300 mm CCD SINGLE WAVELENGTH M x-ray 1 1.0 1.0 21-ID-D APS 1.0 SYNCHROTRON APS BEAMLINE 21-ID-D 16234.214 Putative C4-type zinc finger protein, DksA/TraR family 3 man polymer 96.063 SULFATE ION 3 syn non-polymer 18.015 water 21 nat water no no GHMAEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLL DKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN GHMAEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLL DKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n UCBPP-PA14 sample PA14_73020 208963 Pseudomonas aeruginosa 562 Escherichia coli 1 3.93 68.69 VAPOR DIFFUSION, SITTING DROP 7.5 100 mM Hepes pH 7.5, 100 mM ammonium sulfate, 16.5% PEG 8000, VAPOR DIFFUSION, SITTING DROP, temperature 295K 295 repository Initial release Database references 1 0 2013-02-27 1 1 2013-03-27 RCSB Y RCSB 2012-12-21 REL REL SO4 SULFATE ION HOH water SO4 2 2 SO4 SO4 201 A SO4 1 2 SO4 SO4 201 B SO4 3 2 SO4 SO4 201 C HOH 6 3 HOH HOH 301 A HOH 7 3 HOH HOH 302 A HOH 13 3 HOH HOH 303 A HOH 22 3 HOH HOH 304 A HOH 126 3 HOH HOH 305 A HOH 142 3 HOH HOH 306 A HOH 155 3 HOH HOH 307 A HOH 159 3 HOH HOH 308 A HOH 37 3 HOH HOH 301 B HOH 41 3 HOH HOH 302 B HOH 111 3 HOH HOH 303 B HOH 121 3 HOH HOH 304 B HOH 129 3 HOH HOH 305 B HOH 136 3 HOH HOH 306 B HOH 170 3 HOH HOH 307 B HOH 71 3 HOH HOH 301 C HOH 89 3 HOH HOH 302 C HOH 122 3 HOH HOH 303 C HOH 143 3 HOH HOH 304 C HOH 153 3 HOH HOH 305 C HOH 165 3 HOH HOH 306 C n 1 -1 A n 2 0 A n 3 1 A ALA 2 n 4 ALA 2 A GLU 3 n 5 GLU 3 A GLN 4 n 6 GLN 4 A GLU 5 n 7 GLU 5 A LEU 6 n 8 LEU 6 A LEU 7 n 9 LEU 7 A ALA 8 n 10 ALA 8 A GLN 9 n 11 GLN 9 A PRO 10 n 12 PRO 10 A ASP 11 n 13 ASP 11 A ALA 12 n 14 ALA 12 A ALA 13 n 15 ALA 13 A TYR 14 n 16 TYR 14 A MET 15 n 17 MET 15 A ASP 16 n 18 ASP 16 A GLU 17 n 19 GLU 17 A ALA 18 n 20 ALA 18 A GLN 19 n 21 GLN 19 A GLN 20 n 22 GLN 20 A ALA 21 n 23 ASP 21 A PHE 22 n 24 PHE 22 A PHE 23 n 25 PHE 23 A ARG 24 n 26 ARG 24 A ASP 25 n 27 ASP 25 A LEU 26 n 28 LEU 26 A LEU 27 n 29 LEU 27 A LEU 28 n 30 LEU 28 A ARG 29 n 31 ARG 29 A GLN 30 n 32 GLN 30 A ARG 31 n 33 ARG 31 A GLN 32 n 34 GLN 32 A GLU 33 n 35 GLU 33 A LEU 34 n 36 LEU 34 A GLN 35 n 37 GLN 35 A ALA 36 n 38 ALA 36 A ARG 37 n 39 ARG 37 A ILE 38 n 40 ILE 38 A GLU 39 n 41 GLU 39 A GLY 40 n 42 GLY 40 A GLU 41 n 43 GLU 41 A PHE 42 n 44 PHE 42 A GLY 43 n 45 GLY 43 A GLU 44 n 46 GLU 44 A LEU 45 n 47 LEU 45 A ARG 46 n 48 ARG 46 A ASP 47 n 49 ASP 47 A LEU 48 n 50 LEU 48 A GLU 49 n 51 GLU 49 A ARG 50 n 52 ARG 50 A PRO 51 n 53 PRO 51 A SER 52 n 54 SER 52 A ASP 53 n 55 ASP 53 A GLU 54 n 56 GLU 54 A ALA 55 n 57 ALA 55 A ASP 56 n 58 ASP 56 A LEU 57 n 59 LEU 57 A ALA 58 n 60 ALA 58 A SER 59 n 61 SER 59 A ARG 60 n 62 ARG 60 A GLU 61 n 63 GLU 61 A GLU 62 n 64 GLU 62 A GLN 63 n 65 GLN 63 A ARG 64 n 66 ARG 64 A GLN 65 n 67 GLN 65 A TRP 66 n 68 TRP 66 A GLN 67 n 69 GLN 67 A LEU 68 n 70 LEU 68 A ARG 69 n 71 ARG 69 A LEU 70 n 72 LEU 70 A LEU 71 n 73 LEU 71 A GLU 72 n 74 GLU 72 A ARG 73 n 75 ARG 73 A GLU 74 n 76 GLU 74 A LYS 75 n 77 LYS 75 A LYS 76 n 78 LYS 76 A LEU 77 n 79 LEU 77 A LEU 78 n 80 LEU 78 A ASP 79 n 81 ASP 79 A LYS 80 n 82 LYS 80 A ILE 81 n 83 ILE 81 A ASP 82 n 84 ASP 82 A GLU 83 n 85 GLU 83 A ALA 84 n 86 ALA 84 A LEU 85 n 87 LEU 85 A GLU 86 n 88 GLU 86 A ARG 87 n 89 ARG 87 A LEU 88 n 90 LEU 88 A ALA 89 n 91 ALA 89 A ARG 90 n 92 ARG 90 A GLY 91 n 93 GLY 91 A ASP 92 n 94 ASP 92 A TYR 93 n 95 TYR 93 A GLY 94 n 96 GLY 94 A TRP 95 n 97 TRP 95 A CYS 96 n 98 CYS 96 A GLN 97 n 99 GLN 97 A GLU 98 n 100 GLU 98 A THR 99 n 101 THR 99 A GLY 100 n 102 GLY 100 A GLU 101 n 103 GLU 101 A PRO 102 n 104 PRO 102 A ILE 103 n 105 ILE 103 A GLY 104 n 106 GLY 104 A LEU 105 n 107 LEU 105 A ARG 106 n 108 ARG 106 A ARG 107 n 109 ARG 107 A LEU 108 n 110 LEU 108 A LEU 109 n 111 LEU 109 A LEU 110 n 112 LEU 110 A ARG 111 n 113 ARG 111 A PRO 112 n 114 PRO 112 A THR 113 n 115 THR 113 A ALA 114 n 116 ALA 114 A THR 115 n 117 THR 115 A LEU 116 n 118 LEU 116 A CYS 117 n 119 CYS 117 A ILE 118 n 120 ILE 118 A GLU 119 n 121 GLU 119 A ALA 120 n 122 ALA 120 A LYS 121 n 123 LYS 121 A GLU 122 n 124 GLU 122 A ARG 123 n 125 ARG 123 A GLN 124 n 126 GLN 124 A GLU 125 n 127 GLU 125 A LYS 126 n 128 LYS 126 A ARG 127 n 129 ARG 127 A GLU 128 n 130 GLU 128 A ARG 129 n 131 ARG 129 A HIS 130 n 132 HIS 130 A n 133 131 A n 134 132 A n 135 133 A n 136 134 A n 1 -1 B n 2 0 B MET 1 n 3 MET 1 B ALA 2 n 4 ALA 2 B GLU 3 n 5 GLU 3 B GLN 4 n 6 GLN 4 B GLU 5 n 7 GLU 5 B LEU 6 n 8 LEU 6 B LEU 7 n 9 LEU 7 B ALA 8 n 10 ALA 8 B GLN 9 n 11 GLN 9 B PRO 10 n 12 PRO 10 B ASP 11 n 13 ASP 11 B ALA 12 n 14 ALA 12 B ALA 13 n 15 ALA 13 B TYR 14 n 16 TYR 14 B MET 15 n 17 MET 15 B ASP 16 n 18 ASP 16 B GLU 17 n 19 GLU 17 B ALA 18 n 20 ALA 18 B GLN 19 n 21 GLN 19 B GLN 20 n 22 GLN 20 B ALA 21 n 23 ASP 21 B PHE 22 n 24 PHE 22 B PHE 23 n 25 PHE 23 B ARG 24 n 26 ARG 24 B ASP 25 n 27 ASP 25 B LEU 26 n 28 LEU 26 B LEU 27 n 29 LEU 27 B LEU 28 n 30 LEU 28 B ARG 29 n 31 ARG 29 B GLN 30 n 32 GLN 30 B ARG 31 n 33 ARG 31 B GLN 32 n 34 GLN 32 B GLU 33 n 35 GLU 33 B LEU 34 n 36 LEU 34 B GLN 35 n 37 GLN 35 B ALA 36 n 38 ALA 36 B ARG 37 n 39 ARG 37 B ILE 38 n 40 ILE 38 B GLU 39 n 41 GLU 39 B GLY 40 n 42 GLY 40 B GLU 41 n 43 GLU 41 B PHE 42 n 44 PHE 42 B GLY 43 n 45 GLY 43 B GLU 44 n 46 GLU 44 B LEU 45 n 47 LEU 45 B ARG 46 n 48 ARG 46 B ASP 47 n 49 ASP 47 B LEU 48 n 50 LEU 48 B GLU 49 n 51 GLU 49 B ARG 50 n 52 ARG 50 B PRO 51 n 53 PRO 51 B SER 52 n 54 SER 52 B ASP 53 n 55 ASP 53 B GLU 54 n 56 GLU 54 B ALA 55 n 57 ALA 55 B ASP 56 n 58 ASP 56 B LEU 57 n 59 LEU 57 B ALA 58 n 60 ALA 58 B SER 59 n 61 SER 59 B ARG 60 n 62 ARG 60 B GLU 61 n 63 GLU 61 B GLU 62 n 64 GLU 62 B GLN 63 n 65 GLN 63 B ARG 64 n 66 ARG 64 B GLN 65 n 67 GLN 65 B TRP 66 n 68 TRP 66 B GLN 67 n 69 GLN 67 B LEU 68 n 70 LEU 68 B ARG 69 n 71 ARG 69 B LEU 70 n 72 LEU 70 B LEU 71 n 73 LEU 71 B GLU 72 n 74 GLU 72 B ARG 73 n 75 ARG 73 B GLU 74 n 76 GLU 74 B LYS 75 n 77 LYS 75 B LYS 76 n 78 LYS 76 B LEU 77 n 79 LEU 77 B LEU 78 n 80 LEU 78 B ASP 79 n 81 ASP 79 B LYS 80 n 82 LYS 80 B ILE 81 n 83 ILE 81 B ASP 82 n 84 ASP 82 B GLU 83 n 85 GLU 83 B ALA 84 n 86 ALA 84 B LEU 85 n 87 LEU 85 B GLU 86 n 88 GLU 86 B ARG 87 n 89 ARG 87 B LEU 88 n 90 LEU 88 B ALA 89 n 91 ALA 89 B ARG 90 n 92 ARG 90 B GLY 91 n 93 GLY 91 B ASP 92 n 94 ASP 92 B TYR 93 n 95 TYR 93 B GLY 94 n 96 GLY 94 B TRP 95 n 97 TRP 95 B CYS 96 n 98 CYS 96 B GLN 97 n 99 GLN 97 B GLU 98 n 100 GLU 98 B THR 99 n 101 THR 99 B GLY 100 n 102 GLY 100 B GLU 101 n 103 GLU 101 B PRO 102 n 104 PRO 102 B ILE 103 n 105 ILE 103 B GLY 104 n 106 GLY 104 B LEU 105 n 107 LEU 105 B ARG 106 n 108 ARG 106 B ARG 107 n 109 ARG 107 B LEU 108 n 110 LEU 108 B LEU 109 n 111 LEU 109 B LEU 110 n 112 LEU 110 B ARG 111 n 113 ARG 111 B PRO 112 n 114 PRO 112 B THR 113 n 115 THR 113 B ALA 114 n 116 ALA 114 B THR 115 n 117 THR 115 B LEU 116 n 118 LEU 116 B CYS 117 n 119 CYS 117 B ILE 118 n 120 ILE 118 B GLU 119 n 121 GLU 119 B ALA 120 n 122 ALA 120 B LYS 121 n 123 LYS 121 B GLU 122 n 124 GLU 122 B ARG 123 n 125 ARG 123 B GLN 124 n 126 GLN 124 B GLU 125 n 127 GLU 125 B LYS 126 n 128 LYS 126 B ARG 127 n 129 ARG 127 B GLU 128 n 130 GLU 128 B ARG 129 n 131 ARG 129 B HIS 130 n 132 HIS 130 B n 133 131 B n 134 132 B n 135 133 B n 136 134 B n 1 -1 C n 2 0 C n 3 1 C ALA 2 n 4 ALA 2 C GLU 3 n 5 GLU 3 C GLN 4 n 6 GLN 4 C GLU 5 n 7 GLU 5 C LEU 6 n 8 LEU 6 C LEU 7 n 9 LEU 7 C ALA 8 n 10 ALA 8 C GLN 9 n 11 GLN 9 C PRO 10 n 12 PRO 10 C ASP 11 n 13 ASP 11 C ALA 12 n 14 ALA 12 C ALA 13 n 15 ALA 13 C TYR 14 n 16 TYR 14 C MET 15 n 17 MET 15 C ASP 16 n 18 ASP 16 C GLU 17 n 19 GLU 17 C ALA 18 n 20 ALA 18 C GLN 19 n 21 GLN 19 C GLN 20 n 22 GLN 20 C ALA 21 n 23 ASP 21 C PHE 22 n 24 PHE 22 C PHE 23 n 25 PHE 23 C ARG 24 n 26 ARG 24 C ASP 25 n 27 ASP 25 C LEU 26 n 28 LEU 26 C LEU 27 n 29 LEU 27 C LEU 28 n 30 LEU 28 C ARG 29 n 31 ARG 29 C GLN 30 n 32 GLN 30 C ARG 31 n 33 ARG 31 C GLN 32 n 34 GLN 32 C GLU 33 n 35 GLU 33 C LEU 34 n 36 LEU 34 C GLN 35 n 37 GLN 35 C ALA 36 n 38 ALA 36 C ARG 37 n 39 ARG 37 C ILE 38 n 40 ILE 38 C GLU 39 n 41 GLU 39 C GLY 40 n 42 GLY 40 C GLU 41 n 43 GLU 41 C PHE 42 n 44 PHE 42 C GLY 43 n 45 GLY 43 C GLU 44 n 46 GLU 44 C LEU 45 n 47 LEU 45 C ARG 46 n 48 ARG 46 C ASP 47 n 49 ASP 47 C LEU 48 n 50 LEU 48 C GLU 49 n 51 GLU 49 C ARG 50 n 52 ARG 50 C PRO 51 n 53 PRO 51 C SER 52 n 54 SER 52 C ASP 53 n 55 ASP 53 C GLU 54 n 56 GLU 54 C ALA 55 n 57 ALA 55 C ASP 56 n 58 ASP 56 C LEU 57 n 59 LEU 57 C ALA 58 n 60 ALA 58 C SER 59 n 61 SER 59 C ARG 60 n 62 ARG 60 C GLU 61 n 63 GLU 61 C GLU 62 n 64 GLU 62 C GLN 63 n 65 GLN 63 C ARG 64 n 66 ARG 64 C GLN 65 n 67 GLN 65 C TRP 66 n 68 TRP 66 C GLN 67 n 69 GLN 67 C LEU 68 n 70 LEU 68 C ARG 69 n 71 ARG 69 C LEU 70 n 72 LEU 70 C LEU 71 n 73 LEU 71 C GLU 72 n 74 GLU 72 C ARG 73 n 75 ARG 73 C GLU 74 n 76 GLU 74 C LYS 75 n 77 LYS 75 C LYS 76 n 78 LYS 76 C LEU 77 n 79 LEU 77 C LEU 78 n 80 LEU 78 C ASP 79 n 81 ASP 79 C LYS 80 n 82 LYS 80 C ILE 81 n 83 ILE 81 C ASP 82 n 84 ASP 82 C GLU 83 n 85 GLU 83 C ALA 84 n 86 ALA 84 C LEU 85 n 87 LEU 85 C GLU 86 n 88 GLU 86 C ARG 87 n 89 ARG 87 C LEU 88 n 90 LEU 88 C ALA 89 n 91 ALA 89 C ARG 90 n 92 ARG 90 C GLY 91 n 93 GLY 91 C ASP 92 n 94 ASP 92 C TYR 93 n 95 TYR 93 C GLY 94 n 96 GLY 94 C TRP 95 n 97 TRP 95 C CYS 96 n 98 CYS 96 C GLN 97 n 99 GLN 97 C GLU 98 n 100 GLU 98 C THR 99 n 101 THR 99 C GLY 100 n 102 GLY 100 C GLU 101 n 103 GLU 101 C PRO 102 n 104 PRO 102 C ILE 103 n 105 ILE 103 C GLY 104 n 106 GLY 104 C LEU 105 n 107 LEU 105 C ARG 106 n 108 ARG 106 C ARG 107 n 109 ARG 107 C LEU 108 n 110 LEU 108 C LEU 109 n 111 LEU 109 C LEU 110 n 112 LEU 110 C ARG 111 n 113 ARG 111 C PRO 112 n 114 PRO 112 C THR 113 n 115 THR 113 C ALA 114 n 116 ALA 114 C THR 115 n 117 THR 115 C LEU 116 n 118 LEU 116 C CYS 117 n 119 CYS 117 C ILE 118 n 120 ILE 118 C GLU 119 n 121 GLU 119 C ALA 120 n 122 ALA 120 C LYS 121 n 123 LYS 121 C GLU 122 n 124 GLU 122 C ARG 123 n 125 ARG 123 C GLN 124 n 126 GLN 124 C GLU 125 n 127 GLU 125 C LYS 126 n 128 LYS 126 C ARG 127 n 129 ARG 127 C GLU 128 n 130 GLU 128 C ARG 129 n 131 ARG 129 C HIS 130 n 132 HIS 130 C n 133 131 C n 134 132 C n 135 133 C n 136 134 C 4.5163 2.9621 0.0778 5.9953 0.2458 2.0232 0.0011 0.3038 0.0985 0.5801 0.2589 0.7992 0.1823 -0.9083 -0.2599 -0.1662 -0.0427 0.1583 -0.2676 0.0531 -0.2963 refined 64.5239 -7.9035 -18.7645 X-RAY DIFFRACTION 4.8270 -0.7296 -2.3867 2.6502 1.6672 6.2607 0.2303 -0.2248 -0.3081 0.5663 -0.1633 0.2989 0.1686 -0.1407 -0.0670 -0.0720 -0.0669 -0.0503 -0.5968 0.1010 -0.3430 refined 76.8013 -24.1913 -23.3609 X-RAY DIFFRACTION 2.0075 -0.7695 0.6523 6.7904 -3.5685 5.9010 -0.1671 0.3355 -0.1601 -0.0684 -0.0085 0.7269 0.2380 -0.7606 0.1756 -0.3268 -0.3311 0.0929 -0.1502 -0.0113 -0.1150 refined 58.7980 -21.4078 -34.1032 X-RAY DIFFRACTION A 2 A 130 X-RAY DIFFRACTION 1 B 1 B 130 X-RAY DIFFRACTION 2 C 2 C 130 X-RAY DIFFRACTION 3 author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A CG GLN 9 A CG GLN 11 1 Y 1 A CD GLN 9 A CD GLN 11 1 Y 1 A OE1 GLN 9 A OE1 GLN 11 1 Y 1 A NE2 GLN 9 A NE2 GLN 11 1 Y 1 A CG ASP 21 A CG ASP 23 1 Y 1 A OD1 ASP 21 A OD1 ASP 23 1 Y 1 A OD2 ASP 21 A OD2 ASP 23 1 Y 1 A CG ARG 46 A CG ARG 48 1 Y 1 A CD ARG 46 A CD ARG 48 1 Y 1 A NE ARG 46 A NE ARG 48 1 Y 1 A CZ ARG 46 A CZ ARG 48 1 Y 1 A NH1 ARG 46 A NH1 ARG 48 1 Y 1 A NH2 ARG 46 A NH2 ARG 48 1 Y 1 A CG ARG 50 A CG ARG 52 1 Y 1 A CD ARG 50 A CD ARG 52 1 Y 1 A NE ARG 50 A NE ARG 52 1 Y 1 A CZ ARG 50 A CZ ARG 52 1 Y 1 A NH1 ARG 50 A NH1 ARG 52 1 Y 1 A NH2 ARG 50 A NH2 ARG 52 1 Y 1 A CG ASP 56 A CG ASP 58 1 Y 1 A OD1 ASP 56 A OD1 ASP 58 1 Y 1 A OD2 ASP 56 A OD2 ASP 58 1 Y 1 A CG LEU 57 A CG LEU 59 1 Y 1 A CD1 LEU 57 A CD1 LEU 59 1 Y 1 A CD2 LEU 57 A CD2 LEU 59 1 Y 1 B CG GLN 9 B CG GLN 11 1 Y 1 B CD GLN 9 B CD GLN 11 1 Y 1 B OE1 GLN 9 B OE1 GLN 11 1 Y 1 B NE2 GLN 9 B NE2 GLN 11 1 Y 1 B CG ASP 21 B CG ASP 23 1 Y 1 B OD1 ASP 21 B OD1 ASP 23 1 Y 1 B OD2 ASP 21 B OD2 ASP 23 1 Y 1 B CG GLU 44 B CG GLU 46 1 Y 1 B CD GLU 44 B CD GLU 46 1 Y 1 B OE1 GLU 44 B OE1 GLU 46 1 Y 1 B OE2 GLU 44 B OE2 GLU 46 1 Y 1 B CG ARG 50 B CG ARG 52 1 Y 1 B CD ARG 50 B CD ARG 52 1 Y 1 B NE ARG 50 B NE ARG 52 1 Y 1 B CZ ARG 50 B CZ ARG 52 1 Y 1 B NH1 ARG 50 B NH1 ARG 52 1 Y 1 B NH2 ARG 50 B NH2 ARG 52 1 Y 1 B CG ASP 56 B CG ASP 58 1 Y 1 B OD1 ASP 56 B OD1 ASP 58 1 Y 1 B OD2 ASP 56 B OD2 ASP 58 1 Y 1 B CG LEU 57 B CG LEU 59 1 Y 1 B CD1 LEU 57 B CD1 LEU 59 1 Y 1 B CD2 LEU 57 B CD2 LEU 59 1 Y 1 C CG GLN 9 C CG GLN 11 1 Y 1 C CD GLN 9 C CD GLN 11 1 Y 1 C OE1 GLN 9 C OE1 GLN 11 1 Y 1 C NE2 GLN 9 C NE2 GLN 11 1 Y 1 C CG ASP 21 C CG ASP 23 1 Y 1 C OD1 ASP 21 C OD1 ASP 23 1 Y 1 C OD2 ASP 21 C OD2 ASP 23 1 Y 1 C CG GLU 44 C CG GLU 46 1 Y 1 C CD GLU 44 C CD GLU 46 1 Y 1 C OE1 GLU 44 C OE1 GLU 46 1 Y 1 C OE2 GLU 44 C OE2 GLU 46 1 Y 1 C CG ARG 50 C CG ARG 52 1 Y 1 C CD ARG 50 C CD ARG 52 1 Y 1 C NE ARG 50 C NE ARG 52 1 Y 1 C CZ ARG 50 C CZ ARG 52 1 Y 1 C NH1 ARG 50 C NH1 ARG 52 1 Y 1 C NH2 ARG 50 C NH2 ARG 52 1 Y 1 C CG ASP 56 C CG ASP 58 1 Y 1 C OD1 ASP 56 C OD1 ASP 58 1 Y 1 C OD2 ASP 56 C OD2 ASP 58 1 Y 1 C CG LEU 57 C CG LEU 59 1 Y 1 C CD1 LEU 57 C CD1 LEU 59 1 Y 1 C CD2 LEU 57 C CD2 LEU 59 1 Y 1 A GLY -1 A GLY 1 1 Y 1 A HIS 0 A HIS 2 1 Y 1 A MET 1 A MET 3 1 Y 1 A VAL 131 A VAL 133 1 Y 1 A ARG 132 A ARG 134 1 Y 1 A HIS 133 A HIS 135 1 Y 1 A ASN 134 A ASN 136 1 Y 1 B GLY -1 B GLY 1 1 Y 1 B HIS 0 B HIS 2 1 Y 1 B VAL 131 B VAL 133 1 Y 1 B ARG 132 B ARG 134 1 Y 1 B HIS 133 B HIS 135 1 Y 1 B ASN 134 B ASN 136 1 Y 1 C GLY -1 C GLY 1 1 Y 1 C HIS 0 C HIS 2 1 Y 1 C MET 1 C MET 3 1 Y 1 C VAL 131 C VAL 133 1 Y 1 C ARG 132 C ARG 134 1 Y 1 C HIS 133 C HIS 135 1 Y 1 C ASN 134 C ASN 136 1 Y 1 A PRO 10 -43.34 168.73 1 A ASP 11 -131.54 -117.26 1 A ALA 12 -80.37 40.52 1 A ARG 46 -64.82 2.01 1 A PRO 51 -30.67 115.96 1 A GLU 98 -65.95 -74.14 1 A GLU 101 -45.25 153.36 1 B PRO 10 -68.75 -143.45 1 B ASP 11 -160.09 -82.91 1 B ARG 46 -74.47 23.23 1 B SER 52 -133.49 -144.43 1 B ARG 111 -151.78 84.86 1 B ARG 129 -39.40 -30.84 1 C ALA 8 -82.49 40.87 1 C ALA 12 -141.86 23.10 1 C PRO 51 -29.90 110.87 1 C ALA 55 -48.50 -70.77 1 C ALA 58 -136.06 -93.06 1 C GLU 61 -57.45 10.45 94.567 5.07 2.53 0.00 5.07 0.00 -7.60 0.914 0.883 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.30953 0.25655 0.25922 3.25 40.00 611 12111 4.8 99.49 57.623 0.457 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.528 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 3.25 40.00 21 3213 15 0 3177 0.007 0.021 3229 1.080 1.992 4333 5.496 5.000 385 32.786 23.542 192 22.183 15.000 623 16.417 15.000 50 0.070 0.200 451 0.003 0.020 2499 0.222 0.200 1611 0.299 0.200 2192 0.142 0.200 135 0.169 0.200 37 0.177 0.200 8 0.276 1.500 1984 0.520 2.000 3044 0.687 3.000 1372 1.210 4.500 1289 0.404 0.330 3.334 38 838 20 95.42 3.25 50.0 4IJJ 12184 12111 2.0 1 99.4 data collection HKL-2000 phasing PHASER refinement REFMAC 5.2.0019 data reduction HKL-2000 data scaling HKL-2000 Putative C4-type zinc finger protein, DksA/TraR family Structure of transcription factor DksA2 from Pseudomonas aeruginosa 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N A ALA 2 A ALA 4 HELX_P A ALA 8 A ALA 10 1 1 7 A ASP 16 A ASP 18 HELX_P A GLU 44 A GLU 46 1 2 29 A ASP 56 A ASP 58 HELX_P A GLY 91 A GLY 93 1 3 36 A GLY 104 A GLY 106 HELX_P A ARG 111 A ARG 113 1 4 8 A CYS 117 A CYS 119 HELX_P A ARG 129 A ARG 131 1 5 13 B GLU 3 B GLU 5 HELX_P B ALA 8 B ALA 10 1 6 6 B ASP 16 B ASP 18 HELX_P B GLU 49 B GLU 51 1 7 34 B ASP 53 B ASP 55 HELX_P B ASP 56 B ASP 58 5 8 4 B LEU 57 B LEU 59 HELX_P B ARG 90 B ARG 92 1 9 34 B GLY 104 B GLY 106 HELX_P B ARG 111 B ARG 113 1 10 8 B CYS 117 B CYS 119 HELX_P B LYS 126 B LYS 128 1 11 10 C GLU 3 C GLU 5 HELX_P C ALA 8 C ALA 10 1 12 6 C ASP 16 C ASP 18 HELX_P C GLU 49 C GLU 51 1 13 34 C SER 59 C SER 61 HELX_P C ARG 90 C ARG 92 1 14 32 C GLY 104 C GLY 106 HELX_P C ARG 111 C ARG 113 1 15 8 C CYS 117 C CYS 119 HELX_P C LYS 126 C LYS 128 1 16 10 disulf 2.079 A CYS 96 A SG CYS 98 1_555 A CYS 117 A SG CYS 119 1_555 HYDROLASE DksA fold, transcription factor, RNA polymerase, disulfide bond, HYDROLASE Q02DH2_PSEAB UNP 1 1 Q02DH2 MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLLDK IDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN 1 134 4IJJ 1 134 Q02DH2 A 1 3 136 1 134 4IJJ 1 134 Q02DH2 B 1 3 136 1 134 4IJJ 1 134 Q02DH2 C 1 3 136 1 EXPRESSION TAG GLY -1 4IJJ A Q02DH2 UNP 1 1 EXPRESSION TAG HIS 0 4IJJ A Q02DH2 UNP 2 1 THR CONFLICT ALA 2 4IJJ A Q02DH2 UNP 2 4 2 EXPRESSION TAG GLY -1 4IJJ B Q02DH2 UNP 1 2 EXPRESSION TAG HIS 0 4IJJ B Q02DH2 UNP 2 2 THR CONFLICT ALA 2 4IJJ B Q02DH2 UNP 2 4 3 EXPRESSION TAG GLY -1 4IJJ C Q02DH2 UNP 1 3 EXPRESSION TAG HIS 0 4IJJ C Q02DH2 UNP 2 3 THR CONFLICT ALA 2 4IJJ C Q02DH2 UNP 2 4 BINDING SITE FOR RESIDUE SO4 A 201 Software 3 BINDING SITE FOR RESIDUE SO4 B 201 Software 6 BINDING SITE FOR RESIDUE SO4 C 201 Software 6 A ARG 111 A ARG 113 3 1_555 A THR 115 A THR 117 3 1_555 A LEU 116 A LEU 118 3 1_555 B ARG 111 B ARG 113 6 1_555 B THR 113 B THR 115 6 1_555 B ALA 114 B ALA 116 6 1_555 B THR 115 B THR 117 6 1_555 B LEU 116 B LEU 118 6 1_555 C ARG 46 C ARG 48 6 1_555 C LYS 80 C LYS 82 6 1_555 C ARG 111 C ARG 113 6 1_555 C THR 113 C THR 115 6 1_555 C ALA 114 C ALA 116 6 1_555 C THR 115 C THR 117 6 1_555 C LEU 116 C LEU 118 6 1_555 177 P 6 2 2