0.013345
0.007704
0.000000
0.000000
0.015409
0.000000
0.000000
0.000000
0.013641
0.000000
0.000000
0.000000
Rozenberg, H.
Eldar, A.
Diskin-Posner, Y.
Shakked, Z.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
74.937
74.937
73.308
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C4 H10 O2 S2
154.251
2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL
non-polymer
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
S
N
89
N
C
N
90
R
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
N
C
N
95
N
S
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
O
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
N
C
N
157
N
C
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
Y
170
N
C
Y
171
N
N
Y
172
N
C
Y
173
N
C
Y
174
N
N
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
S
C
N
194
N
C
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
N
N
212
S
C
N
213
N
C
N
214
N
O
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
O
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
N
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
S
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
O
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
R
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
N
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
N
387
N
O
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
N
405
N
C
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
doub
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
Y
274
N
doub
Y
275
N
sing
Y
276
N
sing
N
277
N
sing
Y
278
N
doub
N
279
N
sing
Y
280
N
doub
N
281
N
sing
Y
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
Y
348
N
sing
Y
349
N
sing
N
350
N
sing
Y
351
N
sing
Y
352
N
doub
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
41
8748
8759
10.1093/nar/gkt630
23863845
Structural studies of p53 inactivation by DNA-contact mutations and its rescue by suppressor mutations via alternative protein-DNA interactions.
2013
10.2210/pdb4ijt/pdb
pdb_00004ijt
100
1
TOROIDAL MIRROR
CCD
2006-04-27
ADSC QUANTUM 4r
DIAMOND (111), GE(220)
SINGLE WAVELENGTH
M
x-ray
1
0.9310
1.0
ID14-3
ESRF
0.9310
SYNCHROTRON
ESRF BEAMLINE ID14-3
22486.535
Cellular tumor antigen p53
DNA binding domain
R273H
1
man
polymer
65.409
ZINC ION
2
syn
non-polymer
154.251
2,3-DIHYDROXY-1,4-DITHIOBUTANE
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
3
syn
non-polymer
18.015
water
259
nat
water
Antigen NY-CO-13, Phosphoprotein p53, Tumor suppressor p53
no
no
SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV
RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT
IITLEDSSGNLLGRNSFEVHVCACPGRDRRTEEENLRKKG
SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV
RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT
IITLEDSSGNLLGRNSFEVHVCACPGRDRRTEEENLRKKG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
P53, TP53
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET-27-b
1
2.64
53.45
VAPOR DIFFUSION, HANGING DROP
6.1
1:1.5 PROTEIN/DNA RATIO, 20% PEG 3350, 0.2M KCl, pH 6.1, Vapor diffusion, hanging drop, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Database references
Structure summary
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-08-14
1
1
2013-10-23
1
2
2015-05-20
1
3
2017-11-15
1
4
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2012-12-23
REL
REL
ZN
ZINC ION
DTT
2,3-DIHYDROXY-1,4-DITHIOBUTANE
EDO
1,2-ETHANEDIOL
HOH
water
1TSR
PDB entry 1TSR
PDB
experimental model
ZN
1
2
ZN
ZN
301
A
ZN
2
2
ZN
ZN
302
A
DTT
301
3
DTT
DTT
303
A
EDO
302
4
EDO
EDO
304
A
EDO
303
4
EDO
EDO
305
A
EDO
304
4
EDO
EDO
306
A
HOH
1
5
HOH
HOH
401
A
HOH
2
5
HOH
HOH
402
A
HOH
3
5
HOH
HOH
403
A
HOH
4
5
HOH
HOH
404
A
HOH
5
5
HOH
HOH
405
A
HOH
6
5
HOH
HOH
406
A
HOH
7
5
HOH
HOH
407
A
HOH
8
5
HOH
HOH
408
A
HOH
9
5
HOH
HOH
409
A
HOH
10
5
HOH
HOH
410
A
HOH
11
5
HOH
HOH
411
A
HOH
12
5
HOH
HOH
412
A
HOH
13
5
HOH
HOH
413
A
HOH
14
5
HOH
HOH
414
A
HOH
15
5
HOH
HOH
415
A
HOH
16
5
HOH
HOH
416
A
HOH
17
5
HOH
HOH
417
A
HOH
18
5
HOH
HOH
418
A
HOH
19
5
HOH
HOH
419
A
HOH
20
5
HOH
HOH
420
A
HOH
21
5
HOH
HOH
421
A
HOH
22
5
HOH
HOH
422
A
HOH
23
5
HOH
HOH
423
A
HOH
24
5
HOH
HOH
424
A
HOH
25
5
HOH
HOH
425
A
HOH
26
5
HOH
HOH
426
A
HOH
27
5
HOH
HOH
427
A
HOH
28
5
HOH
HOH
428
A
HOH
29
5
HOH
HOH
429
A
HOH
30
5
HOH
HOH
430
A
HOH
31
5
HOH
HOH
431
A
HOH
32
5
HOH
HOH
432
A
HOH
33
5
HOH
HOH
433
A
HOH
34
5
HOH
HOH
434
A
HOH
35
5
HOH
HOH
435
A
HOH
36
5
HOH
HOH
436
A
HOH
37
5
HOH
HOH
437
A
HOH
38
5
HOH
HOH
438
A
HOH
39
5
HOH
HOH
439
A
HOH
40
5
HOH
HOH
440
A
HOH
41
5
HOH
HOH
441
A
HOH
42
5
HOH
HOH
442
A
HOH
43
5
HOH
HOH
443
A
HOH
44
5
HOH
HOH
444
A
HOH
45
5
HOH
HOH
445
A
HOH
46
5
HOH
HOH
446
A
HOH
47
5
HOH
HOH
447
A
HOH
48
5
HOH
HOH
448
A
HOH
49
5
HOH
HOH
449
A
HOH
50
5
HOH
HOH
450
A
HOH
51
5
HOH
HOH
451
A
HOH
52
5
HOH
HOH
452
A
HOH
53
5
HOH
HOH
453
A
HOH
54
5
HOH
HOH
454
A
HOH
55
5
HOH
HOH
455
A
HOH
56
5
HOH
HOH
456
A
HOH
57
5
HOH
HOH
457
A
HOH
58
5
HOH
HOH
458
A
HOH
59
5
HOH
HOH
459
A
HOH
60
5
HOH
HOH
460
A
HOH
61
5
HOH
HOH
461
A
HOH
62
5
HOH
HOH
462
A
HOH
63
5
HOH
HOH
463
A
HOH
64
5
HOH
HOH
464
A
HOH
65
5
HOH
HOH
465
A
HOH
66
5
HOH
HOH
466
A
HOH
67
5
HOH
HOH
467
A
HOH
68
5
HOH
HOH
468
A
HOH
69
5
HOH
HOH
469
A
HOH
70
5
HOH
HOH
470
A
HOH
71
5
HOH
HOH
471
A
HOH
72
5
HOH
HOH
472
A
HOH
73
5
HOH
HOH
473
A
HOH
74
5
HOH
HOH
474
A
HOH
75
5
HOH
HOH
475
A
HOH
76
5
HOH
HOH
476
A
HOH
77
5
HOH
HOH
477
A
HOH
79
5
HOH
HOH
478
A
HOH
80
5
HOH
HOH
479
A
HOH
81
5
HOH
HOH
480
A
HOH
82
5
HOH
HOH
481
A
HOH
83
5
HOH
HOH
482
A
HOH
84
5
HOH
HOH
483
A
HOH
85
5
HOH
HOH
484
A
HOH
86
5
HOH
HOH
485
A
HOH
87
5
HOH
HOH
486
A
HOH
88
5
HOH
HOH
487
A
HOH
89
5
HOH
HOH
488
A
HOH
90
5
HOH
HOH
489
A
HOH
91
5
HOH
HOH
490
A
HOH
92
5
HOH
HOH
491
A
HOH
93
5
HOH
HOH
492
A
HOH
94
5
HOH
HOH
493
A
HOH
95
5
HOH
HOH
494
A
HOH
96
5
HOH
HOH
495
A
HOH
97
5
HOH
HOH
496
A
HOH
98
5
HOH
HOH
497
A
HOH
99
5
HOH
HOH
498
A
HOH
100
5
HOH
HOH
499
A
HOH
101
5
HOH
HOH
500
A
HOH
102
5
HOH
HOH
501
A
HOH
103
5
HOH
HOH
502
A
HOH
104
5
HOH
HOH
503
A
HOH
105
5
HOH
HOH
504
A
HOH
106
5
HOH
HOH
505
A
HOH
107
5
HOH
HOH
506
A
HOH
108
5
HOH
HOH
507
A
HOH
109
5
HOH
HOH
508
A
HOH
110
5
HOH
HOH
509
A
HOH
111
5
HOH
HOH
510
A
HOH
112
5
HOH
HOH
511
A
HOH
113
5
HOH
HOH
512
A
HOH
114
5
HOH
HOH
513
A
HOH
115
5
HOH
HOH
514
A
HOH
116
5
HOH
HOH
515
A
HOH
117
5
HOH
HOH
516
A
HOH
118
5
HOH
HOH
517
A
HOH
119
5
HOH
HOH
518
A
HOH
120
5
HOH
HOH
519
A
HOH
121
5
HOH
HOH
520
A
HOH
122
5
HOH
HOH
521
A
HOH
123
5
HOH
HOH
522
A
HOH
124
5
HOH
HOH
523
A
HOH
125
5
HOH
HOH
524
A
HOH
126
5
HOH
HOH
525
A
HOH
127
5
HOH
HOH
526
A
HOH
128
5
HOH
HOH
527
A
HOH
129
5
HOH
HOH
528
A
HOH
130
5
HOH
HOH
529
A
HOH
131
5
HOH
HOH
530
A
HOH
132
5
HOH
HOH
531
A
HOH
133
5
HOH
HOH
532
A
HOH
134
5
HOH
HOH
533
A
HOH
135
5
HOH
HOH
534
A
HOH
136
5
HOH
HOH
535
A
HOH
137
5
HOH
HOH
536
A
HOH
138
5
HOH
HOH
537
A
HOH
139
5
HOH
HOH
538
A
HOH
140
5
HOH
HOH
539
A
HOH
141
5
HOH
HOH
540
A
HOH
142
5
HOH
HOH
541
A
HOH
143
5
HOH
HOH
542
A
HOH
145
5
HOH
HOH
543
A
HOH
146
5
HOH
HOH
544
A
HOH
147
5
HOH
HOH
545
A
HOH
148
5
HOH
HOH
546
A
HOH
149
5
HOH
HOH
547
A
HOH
150
5
HOH
HOH
548
A
HOH
151
5
HOH
HOH
549
A
HOH
152
5
HOH
HOH
550
A
HOH
153
5
HOH
HOH
551
A
HOH
154
5
HOH
HOH
552
A
HOH
155
5
HOH
HOH
553
A
HOH
156
5
HOH
HOH
554
A
HOH
157
5
HOH
HOH
555
A
HOH
158
5
HOH
HOH
556
A
HOH
159
5
HOH
HOH
557
A
HOH
160
5
HOH
HOH
558
A
HOH
161
5
HOH
HOH
559
A
HOH
162
5
HOH
HOH
560
A
HOH
163
5
HOH
HOH
561
A
HOH
164
5
HOH
HOH
562
A
HOH
165
5
HOH
HOH
563
A
HOH
166
5
HOH
HOH
564
A
HOH
167
5
HOH
HOH
565
A
HOH
168
5
HOH
HOH
566
A
HOH
169
5
HOH
HOH
567
A
HOH
170
5
HOH
HOH
568
A
HOH
171
5
HOH
HOH
569
A
HOH
172
5
HOH
HOH
570
A
HOH
173
5
HOH
HOH
571
A
HOH
174
5
HOH
HOH
572
A
HOH
175
5
HOH
HOH
573
A
HOH
176
5
HOH
HOH
574
A
HOH
177
5
HOH
HOH
575
A
HOH
178
5
HOH
HOH
576
A
HOH
179
5
HOH
HOH
577
A
HOH
180
5
HOH
HOH
578
A
HOH
181
5
HOH
HOH
579
A
HOH
182
5
HOH
HOH
580
A
HOH
183
5
HOH
HOH
581
A
HOH
184
5
HOH
HOH
582
A
HOH
185
5
HOH
HOH
583
A
HOH
186
5
HOH
HOH
584
A
HOH
187
5
HOH
HOH
585
A
HOH
188
5
HOH
HOH
586
A
HOH
189
5
HOH
HOH
587
A
HOH
190
5
HOH
HOH
588
A
HOH
191
5
HOH
HOH
589
A
HOH
192
5
HOH
HOH
590
A
HOH
193
5
HOH
HOH
591
A
HOH
194
5
HOH
HOH
592
A
HOH
195
5
HOH
HOH
593
A
HOH
196
5
HOH
HOH
594
A
HOH
197
5
HOH
HOH
595
A
HOH
198
5
HOH
HOH
596
A
HOH
199
5
HOH
HOH
597
A
HOH
200
5
HOH
HOH
598
A
HOH
201
5
HOH
HOH
599
A
HOH
202
5
HOH
HOH
600
A
HOH
203
5
HOH
HOH
601
A
HOH
204
5
HOH
HOH
602
A
HOH
205
5
HOH
HOH
603
A
HOH
206
5
HOH
HOH
604
A
HOH
207
5
HOH
HOH
605
A
HOH
208
5
HOH
HOH
606
A
HOH
209
5
HOH
HOH
607
A
HOH
210
5
HOH
HOH
608
A
HOH
211
5
HOH
HOH
609
A
HOH
212
5
HOH
HOH
610
A
HOH
213
5
HOH
HOH
611
A
HOH
214
5
HOH
HOH
612
A
HOH
215
5
HOH
HOH
613
A
HOH
216
5
HOH
HOH
614
A
HOH
217
5
HOH
HOH
615
A
HOH
218
5
HOH
HOH
616
A
HOH
219
5
HOH
HOH
617
A
HOH
220
5
HOH
HOH
618
A
HOH
221
5
HOH
HOH
619
A
HOH
222
5
HOH
HOH
620
A
HOH
223
5
HOH
HOH
621
A
HOH
224
5
HOH
HOH
622
A
HOH
225
5
HOH
HOH
623
A
HOH
226
5
HOH
HOH
624
A
HOH
227
5
HOH
HOH
625
A
HOH
228
5
HOH
HOH
626
A
HOH
229
5
HOH
HOH
627
A
HOH
230
5
HOH
HOH
628
A
HOH
231
5
HOH
HOH
629
A
HOH
232
5
HOH
HOH
630
A
HOH
233
5
HOH
HOH
631
A
HOH
234
5
HOH
HOH
632
A
HOH
235
5
HOH
HOH
633
A
HOH
236
5
HOH
HOH
634
A
HOH
237
5
HOH
HOH
635
A
HOH
238
5
HOH
HOH
636
A
HOH
239
5
HOH
HOH
637
A
HOH
240
5
HOH
HOH
638
A
HOH
241
5
HOH
HOH
639
A
HOH
242
5
HOH
HOH
640
A
HOH
243
5
HOH
HOH
641
A
HOH
244
5
HOH
HOH
642
A
HOH
245
5
HOH
HOH
643
A
HOH
246
5
HOH
HOH
644
A
HOH
247
5
HOH
HOH
645
A
HOH
248
5
HOH
HOH
646
A
HOH
249
5
HOH
HOH
647
A
HOH
250
5
HOH
HOH
648
A
HOH
251
5
HOH
HOH
649
A
HOH
252
5
HOH
HOH
650
A
HOH
253
5
HOH
HOH
651
A
HOH
254
5
HOH
HOH
652
A
HOH
255
5
HOH
HOH
653
A
HOH
256
5
HOH
HOH
654
A
HOH
257
5
HOH
HOH
655
A
HOH
259
5
HOH
HOH
656
A
HOH
260
5
HOH
HOH
657
A
HOH
261
5
HOH
HOH
658
A
HOH
262
5
HOH
HOH
659
A
SER
94
n
1
SER
94
A
SER
95
n
2
SER
95
A
SER
96
n
3
SER
96
A
VAL
97
n
4
VAL
97
A
PRO
98
n
5
PRO
98
A
SER
99
n
6
SER
99
A
GLN
100
n
7
GLN
100
A
LYS
101
n
8
LYS
101
A
THR
102
n
9
THR
102
A
TYR
103
n
10
TYR
103
A
GLN
104
n
11
GLN
104
A
GLY
105
n
12
GLY
105
A
SER
106
n
13
SER
106
A
TYR
107
n
14
TYR
107
A
GLY
108
n
15
GLY
108
A
PHE
109
n
16
PHE
109
A
ARG
110
n
17
ARG
110
A
LEU
111
n
18
LEU
111
A
GLY
112
n
19
GLY
112
A
PHE
113
n
20
PHE
113
A
LEU
114
n
21
LEU
114
A
HIS
115
n
22
HIS
115
A
SER
116
n
23
SER
116
A
GLY
117
n
24
GLY
117
A
THR
118
n
25
THR
118
A
ALA
119
n
26
ALA
119
A
LYS
120
n
27
LYS
120
A
SER
121
n
28
SER
121
A
VAL
122
n
29
VAL
122
A
THR
123
n
30
THR
123
A
CYS
124
n
31
CYS
124
A
THR
125
n
32
THR
125
A
TYR
126
n
33
TYR
126
A
SER
127
n
34
SER
127
A
PRO
128
n
35
PRO
128
A
ALA
129
n
36
ALA
129
A
LEU
130
n
37
LEU
130
A
ASN
131
n
38
ASN
131
A
LYS
132
n
39
LYS
132
A
MET
133
n
40
MET
133
A
PHE
134
n
41
PHE
134
A
CYS
135
n
42
CYS
135
A
GLN
136
n
43
GLN
136
A
LEU
137
n
44
LEU
137
A
ALA
138
n
45
ALA
138
A
LYS
139
n
46
LYS
139
A
THR
140
n
47
THR
140
A
CYS
141
n
48
CYS
141
A
PRO
142
n
49
PRO
142
A
VAL
143
n
50
VAL
143
A
GLN
144
n
51
GLN
144
A
LEU
145
n
52
LEU
145
A
TRP
146
n
53
TRP
146
A
VAL
147
n
54
VAL
147
A
ASP
148
n
55
ASP
148
A
SER
149
n
56
SER
149
A
THR
150
n
57
THR
150
A
PRO
151
n
58
PRO
151
A
PRO
152
n
59
PRO
152
A
PRO
153
n
60
PRO
153
A
GLY
154
n
61
GLY
154
A
THR
155
n
62
THR
155
A
ARG
156
n
63
ARG
156
A
VAL
157
n
64
VAL
157
A
ARG
158
n
65
ARG
158
A
ALA
159
n
66
ALA
159
A
MET
160
n
67
MET
160
A
ALA
161
n
68
ALA
161
A
ILE
162
n
69
ILE
162
A
TYR
163
n
70
TYR
163
A
LYS
164
n
71
LYS
164
A
GLN
165
n
72
GLN
165
A
SER
166
n
73
SER
166
A
GLN
167
n
74
GLN
167
A
HIS
168
n
75
HIS
168
A
MET
169
n
76
MET
169
A
THR
170
n
77
THR
170
A
GLU
171
n
78
GLU
171
A
VAL
172
n
79
VAL
172
A
VAL
173
n
80
VAL
173
A
ARG
174
n
81
ARG
174
A
ARG
175
n
82
ARG
175
A
CYS
176
n
83
CYS
176
A
PRO
177
n
84
PRO
177
A
HIS
178
n
85
HIS
178
A
HIS
179
n
86
HIS
179
A
GLU
180
n
87
GLU
180
A
ARG
181
n
88
ARG
181
A
CYS
182
n
89
CYS
182
A
SER
183
n
90
SER
183
A
ASP
184
n
91
ASP
184
A
SER
185
n
92
SER
185
A
ASP
186
n
93
ASP
186
A
GLY
187
n
94
GLY
187
A
LEU
188
n
95
LEU
188
A
ALA
189
n
96
ALA
189
A
PRO
190
n
97
PRO
190
A
PRO
191
n
98
PRO
191
A
GLN
192
n
99
GLN
192
A
HIS
193
n
100
HIS
193
A
LEU
194
n
101
LEU
194
A
ILE
195
n
102
ILE
195
A
ARG
196
n
103
ARG
196
A
VAL
197
n
104
VAL
197
A
GLU
198
n
105
GLU
198
A
GLY
199
n
106
GLY
199
A
ASN
200
n
107
ASN
200
A
LEU
201
n
108
LEU
201
A
ARG
202
n
109
ARG
202
A
VAL
203
n
110
VAL
203
A
GLU
204
n
111
GLU
204
A
TYR
205
n
112
TYR
205
A
LEU
206
n
113
LEU
206
A
ASP
207
n
114
ASP
207
A
ASP
208
n
115
ASP
208
A
ARG
209
n
116
ARG
209
A
ASN
210
n
117
ASN
210
A
THR
211
n
118
THR
211
A
PHE
212
n
119
PHE
212
A
ARG
213
n
120
ARG
213
A
HIS
214
n
121
HIS
214
A
SER
215
n
122
SER
215
A
VAL
216
n
123
VAL
216
A
VAL
217
n
124
VAL
217
A
VAL
218
n
125
VAL
218
A
PRO
219
n
126
PRO
219
A
TYR
220
n
127
TYR
220
A
GLU
221
n
128
GLU
221
A
PRO
222
n
129
PRO
222
A
PRO
223
n
130
PRO
223
A
GLU
224
n
131
GLU
224
A
VAL
225
n
132
VAL
225
A
GLY
226
n
133
GLY
226
A
SER
227
n
134
SER
227
A
ASP
228
n
135
ASP
228
A
CYS
229
n
136
CYS
229
A
THR
230
n
137
THR
230
A
THR
231
n
138
THR
231
A
ILE
232
n
139
ILE
232
A
HIS
233
n
140
HIS
233
A
TYR
234
n
141
TYR
234
A
ASN
235
n
142
ASN
235
A
TYR
236
n
143
TYR
236
A
MET
237
n
144
MET
237
A
CYS
238
n
145
CYS
238
A
ASN
239
n
146
ASN
239
A
SER
240
n
147
SER
240
A
SER
241
n
148
SER
241
A
CYS
242
n
149
CYS
242
A
MET
243
n
150
MET
243
A
GLY
244
n
151
GLY
244
A
GLY
245
n
152
GLY
245
A
MET
246
n
153
MET
246
A
ASN
247
n
154
ASN
247
A
ARG
248
n
155
ARG
248
A
ARG
249
n
156
ARG
249
A
PRO
250
n
157
PRO
250
A
ILE
251
n
158
ILE
251
A
LEU
252
n
159
LEU
252
A
THR
253
n
160
THR
253
A
ILE
254
n
161
ILE
254
A
ILE
255
n
162
ILE
255
A
THR
256
n
163
THR
256
A
LEU
257
n
164
LEU
257
A
GLU
258
n
165
GLU
258
A
ASP
259
n
166
ASP
259
A
SER
260
n
167
SER
260
A
SER
261
n
168
SER
261
A
GLY
262
n
169
GLY
262
A
ASN
263
n
170
ASN
263
A
LEU
264
n
171
LEU
264
A
LEU
265
n
172
LEU
265
A
GLY
266
n
173
GLY
266
A
ARG
267
n
174
ARG
267
A
ASN
268
n
175
ASN
268
A
SER
269
n
176
SER
269
A
PHE
270
n
177
PHE
270
A
GLU
271
n
178
GLU
271
A
VAL
272
n
179
VAL
272
A
HIS
273
n
180
HIS
273
A
VAL
274
n
181
VAL
274
A
CYS
275
n
182
CYS
275
A
ALA
276
n
183
ALA
276
A
CYS
277
n
184
CYS
277
A
PRO
278
n
185
PRO
278
A
GLY
279
n
186
GLY
279
A
ARG
280
n
187
ARG
280
A
ASP
281
n
188
ASP
281
A
ARG
282
n
189
ARG
282
A
ARG
283
n
190
ARG
283
A
THR
284
n
191
THR
284
A
GLU
285
n
192
GLU
285
A
GLU
286
n
193
GLU
286
A
GLU
287
n
194
GLU
287
A
ASN
288
n
195
ASN
288
A
LEU
289
n
196
LEU
289
A
ARG
290
n
197
ARG
290
A
LYS
291
n
198
LYS
291
A
n
199
292
A
n
200
293
A
0.8607
-0.7003
0.3834
0.8489
0.0066
0.5298
0.2394
0.2538
-0.0704
-0.2212
-0.1479
0.0841
0.0395
-0.0071
1.0161
0.1420
0.0309
0.0189
0.1207
0.0069
0.0885
refined
31.6294
-13.9307
-3.6002
X-RAY DIFFRACTION
0.2929
-0.1061
0.2813
0.3615
-0.3351
0.4384
0.0764
-0.0388
-0.1127
0.0052
-0.0463
0.0210
0.0998
0.0028
0.0082
0.1111
0.0059
-0.0016
0.0747
-0.0140
0.0758
refined
31.8852
-14.6966
1.2298
X-RAY DIFFRACTION
0.9917
-0.6609
-0.4817
0.7773
0.2161
0.3260
-0.0094
-0.0416
0.3242
-0.0321
0.0179
-0.1552
-0.1317
0.0586
-0.1074
0.1212
-0.0252
-0.0041
0.0795
-0.0064
0.1547
refined
36.1911
2.8347
1.2720
X-RAY DIFFRACTION
1.0657
-0.8436
-0.3020
0.9837
-0.0690
1.0369
-0.0051
-0.0402
0.3538
0.0301
-0.1329
-0.3933
-0.0764
0.3532
0.0110
0.1106
-0.0340
0.0053
0.1278
0.0537
0.1479
refined
44.7872
-2.6409
2.3011
X-RAY DIFFRACTION
1.0452
0.1117
-0.0379
0.8466
-0.1776
1.2903
0.0672
0.0348
0.0528
0.0219
-0.1316
-0.0470
0.0098
0.0606
-0.2870
0.0884
0.0033
0.0165
0.0528
-0.0012
0.0447
refined
35.2863
-8.6684
-0.2424
X-RAY DIFFRACTION
0.3285
-0.4706
0.0250
2.4604
0.5926
0.9094
0.0541
-0.0200
-0.1353
-0.3923
-0.3193
0.5716
-0.2304
-0.5667
-0.6170
0.1411
0.0990
-0.0173
0.2338
-0.0330
0.2269
refined
14.0814
-8.4141
-2.0032
X-RAY DIFFRACTION
A
0
A
0
X-RAY DIFFRACTION
1
CHAIN A AND (RESID 94:123 )
A
0
A
0
X-RAY DIFFRACTION
2
CHAIN A AND (RESID 124:155 )
A
0
A
0
X-RAY DIFFRACTION
3
CHAIN A AND (RESID 156:194 )
A
0
A
0
X-RAY DIFFRACTION
4
CHAIN A AND (RESID 195:213 )
A
0
A
0
X-RAY DIFFRACTION
5
CHAIN A AND (RESID 214:277 )
A
0
A
0
X-RAY DIFFRACTION
6
CHAIN A AND (RESID 278:291)
author_and_software_defined_assembly
PISA
1
monomeric
A
CYS
176
A
SG
CYS
83
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HIS
179
A
ND1
HIS
86
1_555
105.5
A
CYS
176
A
SG
CYS
83
1_555
A
ZN
301
B
ZN
ZN
1_555
A
CYS
238
A
SG
CYS
145
1_555
107.9
A
HIS
179
A
ND1
HIS
86
1_555
A
ZN
301
B
ZN
ZN
1_555
A
CYS
238
A
SG
CYS
145
1_555
122.6
A
CYS
176
A
SG
CYS
83
1_555
A
ZN
301
B
ZN
ZN
1_555
A
CYS
242
A
SG
CYS
149
1_555
114.9
A
HIS
179
A
ND1
HIS
86
1_555
A
ZN
301
B
ZN
ZN
1_555
A
CYS
242
A
SG
CYS
149
1_555
99.5
A
CYS
238
A
SG
CYS
145
1_555
A
ZN
301
B
ZN
ZN
1_555
A
CYS
242
A
SG
CYS
149
1_555
106.7
A
CYS
182
A
SG
CYS
89
1_555
A
ZN
302
C
ZN
ZN
1_555
A
DTT
303
D
S4
DTT
1_555
118.4
A
CYS
182
A
SG
CYS
89
1_555
A
ZN
302
C
ZN
ZN
1_555
A
DTT
303
D
S1
DTT
1_555
118.1
A
DTT
303
D
S4
DTT
1_555
A
ZN
302
C
ZN
ZN
1_555
A
DTT
303
D
S1
DTT
1_555
108.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
112
A
N
GLY
19
A
O
GLN
144
A
O
GLN
51
A
N
LEU
145
A
N
LEU
52
A
O
THR
230
A
O
THR
137
A
O
ASN
235
A
O
ASN
142
A
N
ARG
196
A
N
ARG
103
A
N
THR
125
A
N
THR
32
A
O
PHE
134
A
O
PHE
41
A
N
MET
133
A
N
MET
40
A
O
GLU
271
A
O
GLU
178
A
O
LEU
265
A
O
LEU
172
A
N
LEU
257
A
N
LEU
164
A
O
ILE
254
A
O
ILE
161
A
N
MET
160
A
N
MET
67
A
N
VAL
157
A
N
VAL
64
A
O
VAL
218
A
O
VAL
125
A
O
VAL
217
A
O
VAL
124
A
N
GLU
204
A
N
GLU
111
1
A
CB
SER
94
A
CB
SER
1
1
Y
1
A
OG
SER
94
A
OG
SER
1
1
Y
1
A
CZ
ARG
202
A
CZ
ARG
109
1
Y
1
A
NH1
ARG
202
A
NH1
ARG
109
1
Y
1
A
NH2
ARG
202
A
NH2
ARG
109
1
Y
1
A
CD
ARG
209
A
CD
ARG
116
1
Y
1
A
NE
ARG
209
A
NE
ARG
116
1
Y
1
A
CZ
ARG
209
A
CZ
ARG
116
1
Y
1
A
NH1
ARG
209
A
NH1
ARG
116
1
Y
1
A
NH2
ARG
209
A
NH2
ARG
116
1
Y
1
A
OD1
ASN
210
A
OD1
ASN
117
1
Y
1
A
ND2
ASN
210
A
ND2
ASN
117
1
Y
1
A
CD
ARG
280
A
CD
ARG
187
1
Y
1
A
NE
ARG
280
A
NE
ARG
187
1
Y
1
A
CZ
ARG
280
A
CZ
ARG
187
1
Y
1
A
NH1
ARG
280
A
NH1
ARG
187
1
Y
1
A
NH2
ARG
280
A
NH2
ARG
187
1
Y
1
A
NE
ARG
290
A
NE
ARG
197
1
Y
1
A
CZ
ARG
290
A
CZ
ARG
197
1
Y
1
A
NH1
ARG
290
A
NH1
ARG
197
1
Y
1
A
NH2
ARG
290
A
NH2
ARG
197
1
Y
1
A
CG
LYS
291
A
CG
LYS
198
1
Y
1
A
CD
LYS
291
A
CD
LYS
198
1
Y
1
A
CE
LYS
291
A
CE
LYS
198
1
Y
1
A
NZ
LYS
291
A
NZ
LYS
198
1
Y
1
A
LYS
292
A
LYS
199
1
Y
1
A
GLY
293
A
GLY
200
1
Y
1
A
A
OG
O
SER
HOH
240
451
2.18
B
1
A
A
O2
O
EDO
HOH
305
478
2.18
B
51.860
17.3819
4.950
0.1937
0.1616
0.1632
1.78
24.5290
1107
22322
22322
4.9600
99.6900
1.000
0.310
0.8798
0.1800
RANDOM
1
THROUGHOUT
1.370
MOLECULAR REPLACEMENT
19.3300
0.9000
1.1100
PDB entry 1TSR
ML
FLAT BULK SOLVENT MODEL
1.78
24.5290
259
1810
22
0
1529
0.011
1740
1.330
2375
0.094
256
0.006
322
12.843
670
0.2720
0.1999
1.8626
133
2615
2748
8
99.0000
0.2259
0.1831
1.9608
136
2651
2787
8
100.0000
0.2183
0.1685
2.0836
139
2666
2805
8
100.0000
0.2026
0.1619
2.2444
138
2631
2769
8
100.0000
0.2028
0.1681
2.4700
139
2652
2791
8
100.0000
0.2148
0.1776
2.8270
138
2670
2808
8
100.0000
0.1855
0.1525
3.5600
143
2661
2804
8
100.0000
0.1480
0.1388
24.5312
141
2669
2810
8
99.0000
1.780
27.000
4IJT
22336
0
0
0.141
1.058
1
5.600
5.100
99.700
0.529
1.780
1.810
1116
0.821
1
5.300
100.000
0.482
1.810
1.840
1098
0.873
1
5.300
100.000
0.411
1.840
1.880
1120
0.901
1
5.300
100.000
0.354
1.880
1.920
1110
0.981
1
5.300
100.000
0.300
1.920
1.960
1112
1.054
1
5.300
100.000
0.278
1.960
2.000
1124
1.089
1
5.300
100.000
0.242
2.000
2.050
1118
1.076
1
5.300
100.000
0.224
2.050
2.110
1112
1.119
1
5.300
100.000
0.205
2.110
2.170
1105
1.113
1
5.200
100.000
0.188
2.170
2.240
1123
1.099
1
5.200
99.900
0.186
2.240
2.320
1121
1.135
1
5.200
99.900
0.170
2.320
2.420
1123
1.127
1
5.200
99.900
0.159
2.420
2.530
1099
1.164
1
5.100
99.900
0.140
2.530
2.660
1130
1.121
1
5.100
99.800
0.128
2.660
2.820
1119
1.186
1
5.000
99.600
0.112
2.820
3.040
1114
1.098
1
4.900
99.700
0.093
3.040
3.350
1113
1.104
1
4.700
99.400
0.084
3.350
3.830
1128
1.061
1
4.500
99.400
0.078
3.830
4.820
1122
1.042
1
4.400
98.900
0.078
4.820
27.000
1129
1.020
1
4.300
97.100
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
dev_1223
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
DNA
data reduction
HKL-2000
data scaling
HKL-2000
Human p53 core domain with hot spot mutation R273H (form II)
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
A
GLN
165
A
GLN
72
HELX_P
A
MET
169
A
MET
76
5
1
5
A
HIS
178
A
HIS
85
HELX_P
A
CYS
182
A
CYS
89
5
2
5
A
CYS
277
A
CYS
184
HELX_P
A
LYS
291
A
LYS
198
1
3
15
metalc
2.297
A
CYS
176
A
SG
CYS
83
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
1.994
A
HIS
179
A
ND1
HIS
86
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.110
A
CYS
182
A
SG
CYS
89
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.321
A
CYS
238
A
SG
CYS
145
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.350
A
CYS
242
A
SG
CYS
149
1_555
A
ZN
301
B
ZN
ZN
1_555
metalc
2.402
A
ZN
302
C
ZN
ZN
1_555
A
DTT
303
D
S4
DTT
1_555
metalc
2.477
A
ZN
302
C
ZN
ZN
1_555
A
DTT
303
D
S1
DTT
1_555
DNA BINDING PROTEIN
METAL-BINDING, LOOP-SHEET-HELIX MOTIF, TRANSCRIPTION, ACTIVATOR, ANTI-ONCOGENE, APOPTOSIS, CELL CYCLE, DISEASE MUTATION, RESCUE MUTATION, TUMOR SUPPRESSOR, DNA BINDING PROTEIN
P53_HUMAN
UNP
1
94
P04637
SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVV
RRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILT
IITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKG
94
293
4IJT
94
293
P04637
A
1
1
200
1
ARG
engineered mutation
HIS
273
4IJT
A
P04637
UNP
273
180
4
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
110
A
ARG
17
A
GLY
112
A
GLY
19
A
CYS
141
A
CYS
48
A
TRP
146
A
TRP
53
A
THR
230
A
THR
137
A
TYR
236
A
TYR
143
A
ILE
195
A
ILE
102
A
VAL
197
A
VAL
104
A
CYS
124
A
CYS
31
A
SER
127
A
SER
34
A
LYS
132
A
LYS
39
A
CYS
135
A
CYS
42
A
LEU
264
A
LEU
171
A
VAL
274
A
VAL
181
A
ILE
251
A
ILE
158
A
GLU
258
A
GLU
165
A
ARG
156
A
ARG
63
A
TYR
163
A
TYR
70
A
HIS
214
A
HIS
121
A
PRO
219
A
PRO
126
A
GLU
204
A
GLU
111
A
ASP
207
A
ASP
114
BINDING SITE FOR RESIDUE ZN A 301
A
ZN
301
Software
4
BINDING SITE FOR RESIDUE ZN A 302
A
ZN
302
Software
3
BINDING SITE FOR RESIDUE DTT A 303
A
DTT
303
Software
4
BINDING SITE FOR RESIDUE EDO A 304
A
EDO
304
Software
7
BINDING SITE FOR RESIDUE EDO A 305
A
EDO
305
Software
13
BINDING SITE FOR RESIDUE EDO A 306
A
EDO
306
Software
8
A
CYS
176
A
CYS
83
4
1_555
A
HIS
179
A
HIS
86
4
1_555
A
CYS
238
A
CYS
145
4
1_555
A
CYS
242
A
CYS
149
4
1_555
A
HIS
115
A
HIS
22
3
6_555
A
CYS
182
A
CYS
89
3
1_555
A
DTT
303
D
DTT
3
1_555
A
SER
183
A
SER
90
4
1_555
A
ZN
302
C
ZN
4
1_555
A
HOH
495
H
HOH
4
1_555
A
HOH
622
H
HOH
4
1_555
A
LEU
114
A
LEU
21
7
3_654
A
LEU
264
A
LEU
171
7
1_555
A
ARG
267
A
ARG
174
7
1_555
A
HOH
426
H
HOH
7
3_654
A
HOH
533
H
HOH
7
3_654
A
HOH
558
H
HOH
7
1_555
A
HOH
604
H
HOH
7
1_555
A
TYR
103
A
TYR
10
13
2_545
A
GLN
104
A
GLN
11
13
2_545
A
GLY
105
A
GLY
12
13
2_545
A
GLY
108
A
GLY
15
13
2_545
A
THR
231
A
THR
138
13
1_555
A
HIS
233
A
HIS
140
13
1_555
A
HOH
410
H
HOH
13
1_555
A
HOH
411
H
HOH
13
2_545
A
HOH
424
H
HOH
13
1_555
A
HOH
478
H
HOH
13
1_555
A
HOH
496
H
HOH
13
2_545
A
HOH
517
H
HOH
13
2_545
A
HOH
607
H
HOH
13
2_545
A
LEU
114
A
LEU
21
8
1_555
A
SER
116
A
SER
23
8
1_555
A
CYS
124
A
CYS
31
8
1_555
A
PRO
142
A
PRO
49
8
1_555
A
HOH
414
H
HOH
8
1_555
A
HOH
530
H
HOH
8
1_555
A
HOH
536
H
HOH
8
1_555
A
HOH
542
H
HOH
8
2_545
169
P 61