0.023207 0.000000 0.000000 -0.000000 0.011612 0.000000 0.000000 -0.000000 0.015743 0.000000 0.000000 0.000000 Lima, L.M.T.R. Polikarpov, I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 43.090 86.120 63.520 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C19 H16 Cl N O4 357.788 INDOMETHACIN non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 N C N 109 N C N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N N N 118 S C N 119 N C N 120 N O N 121 N C Y 122 N C Y 123 N N Y 124 N C Y 125 N C Y 126 N N N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N O N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 S C N 146 N C N 147 N C N 148 N C N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H Y 163 N C Y 164 N C Y 165 N C Y 166 N C Y 167 N C Y 168 N C N 169 N C Y 170 N C Y 171 N C N 172 N C Y 173 N C Y 174 N C Y 175 N C Y 176 N C Y 177 N C Y 178 N C N 179 N C N 180 N C N 181 N C Y 182 N N N 183 N O N 184 N O N 185 N O N 186 N O N 187 N CL N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C N 209 N C N 210 N C N 211 N C N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N N N 227 S C N 228 N C N 229 N O N 230 N C N 231 N C N 232 N C N 233 N C N 234 N N N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N S N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C Y 276 N C Y 277 N C Y 278 N C Y 279 N C Y 280 N C Y 281 N C N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N C N 300 N C N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N O N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 R C N 330 N O N 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 N C Y 347 N C Y 348 N C Y 349 N C Y 350 N N Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C N 380 N O N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C N 398 N C N 399 N C N 400 N O N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing Y 121 N sing Y 122 N doub Y 123 N doub N 124 N sing Y 125 N sing N 126 N sing Y 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing Y 154 N doub Y 155 N sing Y 156 N sing Y 157 N sing Y 158 N sing Y 159 N doub N 160 N sing Y 161 N sing N 162 N sing Y 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing Y 170 N doub N 171 N sing N 172 N sing Y 173 N sing N 174 N sing N 175 N sing N 176 N doub Y 177 N doub Y 178 N sing Y 179 N sing N 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing Y 272 N doub Y 273 N sing Y 274 N sing N 275 N sing Y 276 N doub N 277 N sing Y 278 N doub N 279 N sing Y 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing Y 341 N doub Y 342 N sing Y 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N sing Y 350 N doub N 351 N sing Y 352 N doub N 353 N sing Y 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N doub N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing To be Published 0353 Crystal structure of wild-type human transthyretin in complex with indomethacin 10.2210/pdb4iki/pdb pdb_00004iki 100 1 IMAGE PLATE 2005-05-01 MAR scanner 345 mm plate SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU ULTRAX 18 13777.360 Transthyretin 2 man polymer 357.788 INDOMETHACIN 2 syn non-polymer 18.015 water 127 nat water ATTR, Prealbumin, TBPA no no GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample TTR, PALB 9606 Homo sapiens 562 Escherichia coli plasmid 1 2.14 42.49 VAPOR DIFFUSION, HANGING DROP 7.4 10mg/mL wtTTR, 22% peg 400, 100mM Tris pH 7.4, 100mM KCl, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Data collection Database references Derived calculations 1 0 2013-01-30 1 1 2024-03-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y PDBJ 2012-12-26 REL REL IMN INDOMETHACIN HOH water IMN 1 2 IMN IMN 201 A IMN 1 2 IMN IMN 201 B HOH 2 3 HOH HOH 301 A HOH 4 3 HOH HOH 302 A HOH 6 3 HOH HOH 303 A HOH 7 3 HOH HOH 304 A HOH 8 3 HOH HOH 305 A HOH 10 3 HOH HOH 306 A HOH 11 3 HOH HOH 307 A HOH 12 3 HOH HOH 308 A HOH 14 3 HOH HOH 309 A HOH 17 3 HOH HOH 310 A HOH 18 3 HOH HOH 311 A HOH 19 3 HOH HOH 312 A HOH 21 3 HOH HOH 313 A HOH 22 3 HOH HOH 314 A HOH 23 3 HOH HOH 315 A HOH 26 3 HOH HOH 316 A HOH 28 3 HOH HOH 317 A HOH 30 3 HOH HOH 318 A HOH 31 3 HOH HOH 319 A HOH 33 3 HOH HOH 320 A HOH 34 3 HOH HOH 321 A HOH 36 3 HOH HOH 322 A HOH 37 3 HOH HOH 323 A HOH 38 3 HOH HOH 324 A HOH 41 3 HOH HOH 325 A HOH 42 3 HOH HOH 326 A HOH 44 3 HOH HOH 327 A HOH 46 3 HOH HOH 328 A HOH 47 3 HOH HOH 329 A HOH 48 3 HOH HOH 330 A HOH 49 3 HOH HOH 331 A HOH 50 3 HOH HOH 332 A HOH 51 3 HOH HOH 333 A HOH 53 3 HOH HOH 334 A HOH 55 3 HOH HOH 335 A HOH 56 3 HOH HOH 336 A HOH 57 3 HOH HOH 337 A HOH 59 3 HOH HOH 338 A HOH 63 3 HOH HOH 339 A HOH 64 3 HOH HOH 340 A HOH 69 3 HOH HOH 341 A HOH 70 3 HOH HOH 342 A HOH 74 3 HOH HOH 343 A HOH 75 3 HOH HOH 344 A HOH 77 3 HOH HOH 345 A HOH 81 3 HOH HOH 346 A HOH 83 3 HOH HOH 347 A HOH 85 3 HOH HOH 348 A HOH 86 3 HOH HOH 349 A HOH 87 3 HOH HOH 350 A HOH 88 3 HOH HOH 351 A HOH 90 3 HOH HOH 352 A HOH 92 3 HOH HOH 353 A HOH 94 3 HOH HOH 354 A HOH 95 3 HOH HOH 355 A HOH 99 3 HOH HOH 356 A HOH 100 3 HOH HOH 357 A HOH 103 3 HOH HOH 358 A HOH 104 3 HOH HOH 359 A HOH 105 3 HOH HOH 360 A HOH 106 3 HOH HOH 361 A HOH 108 3 HOH HOH 362 A HOH 110 3 HOH HOH 363 A HOH 113 3 HOH HOH 364 A HOH 115 3 HOH HOH 365 A HOH 116 3 HOH HOH 366 A HOH 118 3 HOH HOH 367 A HOH 119 3 HOH HOH 368 A HOH 120 3 HOH HOH 369 A HOH 121 3 HOH HOH 370 A HOH 122 3 HOH HOH 371 A HOH 123 3 HOH HOH 372 A HOH 124 3 HOH HOH 373 A HOH 126 3 HOH HOH 374 A HOH 127 3 HOH HOH 375 A HOH 128 3 HOH HOH 376 A HOH 129 3 HOH HOH 377 A HOH 132 3 HOH HOH 378 A HOH 134 3 HOH HOH 379 A HOH 1 3 HOH HOH 301 B HOH 3 3 HOH HOH 302 B HOH 5 3 HOH HOH 303 B HOH 9 3 HOH HOH 304 B HOH 13 3 HOH HOH 305 B HOH 15 3 HOH HOH 306 B HOH 16 3 HOH HOH 307 B HOH 20 3 HOH HOH 308 B HOH 25 3 HOH HOH 309 B HOH 27 3 HOH HOH 310 B HOH 29 3 HOH HOH 311 B HOH 32 3 HOH HOH 312 B HOH 35 3 HOH HOH 313 B HOH 39 3 HOH HOH 314 B HOH 40 3 HOH HOH 315 B HOH 43 3 HOH HOH 316 B HOH 45 3 HOH HOH 317 B HOH 52 3 HOH HOH 318 B HOH 58 3 HOH HOH 319 B HOH 60 3 HOH HOH 320 B HOH 61 3 HOH HOH 321 B HOH 62 3 HOH HOH 322 B HOH 66 3 HOH HOH 323 B HOH 67 3 HOH HOH 324 B HOH 68 3 HOH HOH 325 B HOH 71 3 HOH HOH 326 B HOH 72 3 HOH HOH 327 B HOH 73 3 HOH HOH 328 B HOH 76 3 HOH HOH 329 B HOH 78 3 HOH HOH 330 B HOH 79 3 HOH HOH 331 B HOH 80 3 HOH HOH 332 B HOH 84 3 HOH HOH 333 B HOH 96 3 HOH HOH 334 B HOH 98 3 HOH HOH 335 B HOH 101 3 HOH HOH 336 B HOH 102 3 HOH HOH 337 B HOH 107 3 HOH HOH 338 B HOH 109 3 HOH HOH 339 B HOH 112 3 HOH HOH 340 B HOH 114 3 HOH HOH 341 B HOH 117 3 HOH HOH 342 B HOH 125 3 HOH HOH 343 B HOH 130 3 HOH HOH 344 B HOH 131 3 HOH HOH 345 B HOH 133 3 HOH HOH 346 B HOH 135 3 HOH HOH 347 B HOH 136 3 HOH HOH 348 B 2.260 2.260 43.060 43.060 n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A CYS 10 n 10 CYS 10 A PRO 11 n 11 PRO 11 A LEU 12 n 12 LEU 12 A MET 13 n 13 MET 13 A VAL 14 n 14 VAL 14 A LYS 15 n 15 LYS 15 A VAL 16 n 16 VAL 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ALA 19 n 19 ALA 19 A VAL 20 n 20 VAL 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A SER 23 n 23 SER 23 A PRO 24 n 24 PRO 24 A ALA 25 n 25 ALA 25 A ILE 26 n 26 ILE 26 A ASN 27 n 27 ASN 27 A VAL 28 n 28 VAL 28 A ALA 29 n 29 ALA 29 A VAL 30 n 30 VAL 30 A HIS 31 n 31 HIS 31 A VAL 32 n 32 VAL 32 A PHE 33 n 33 PHE 33 A ARG 34 n 34 ARG 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A ASP 38 n 38 ASP 38 A ASP 39 n 39 ASP 39 A THR 40 n 40 THR 40 A TRP 41 n 41 TRP 41 A GLU 42 n 42 GLU 42 A PRO 43 n 43 PRO 43 A PHE 44 n 44 PHE 44 A ALA 45 n 45 ALA 45 A SER 46 n 46 SER 46 A GLY 47 n 47 GLY 47 A LYS 48 n 48 LYS 48 A THR 49 n 49 THR 49 A SER 50 n 50 SER 50 A GLU 51 n 51 GLU 51 A SER 52 n 52 SER 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A HIS 56 n 56 HIS 56 A GLY 57 n 57 GLY 57 A LEU 58 n 58 LEU 58 A THR 59 n 59 THR 59 A THR 60 n 60 THR 60 A GLU 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A GLU 63 n 63 GLU 63 A PHE 64 n 64 PHE 64 A VAL 65 n 65 VAL 65 A GLU 66 n 66 GLU 66 A GLY 67 n 67 GLY 67 A ILE 68 n 68 ILE 68 A TYR 69 n 69 TYR 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A GLU 72 n 72 GLU 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A THR 75 n 75 THR 75 A LYS 76 n 76 LYS 76 A SER 77 n 77 SER 77 A TYR 78 n 78 TYR 78 A TRP 79 n 79 TRP 79 A LYS 80 n 80 LYS 80 A ALA 81 n 81 ALA 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A ILE 84 n 84 ILE 84 A SER 85 n 85 SER 85 A PRO 86 n 86 PRO 86 A PHE 87 n 87 PHE 87 A HIS 88 n 88 HIS 88 A GLU 89 n 89 GLU 89 A HIS 90 n 90 HIS 90 A ALA 91 n 91 ALA 91 A GLU 92 n 92 GLU 92 A VAL 93 n 93 VAL 93 A VAL 94 n 94 VAL 94 A PHE 95 n 95 PHE 95 A THR 96 n 96 THR 96 A ALA 97 n 97 ALA 97 A ASN 98 n 98 ASN 98 A ASP 99 n 99 ASP 99 A SER 100 n 100 SER 100 A GLY 101 n 101 GLY 101 A PRO 102 n 102 PRO 102 A ARG 103 n 103 ARG 103 A ARG 104 n 104 ARG 104 A TYR 105 n 105 TYR 105 A THR 106 n 106 THR 106 A ILE 107 n 107 ILE 107 A ALA 108 n 108 ALA 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A LEU 111 n 111 LEU 111 A SER 112 n 112 SER 112 A PRO 113 n 113 PRO 113 A TYR 114 n 114 TYR 114 A SER 115 n 115 SER 115 A TYR 116 n 116 TYR 116 A SER 117 n 117 SER 117 A THR 118 n 118 THR 118 A THR 119 n 119 THR 119 A ALA 120 n 120 ALA 120 A VAL 121 n 121 VAL 121 A VAL 122 n 122 VAL 122 A THR 123 n 123 THR 123 A ASN 124 n 124 ASN 124 A PRO 125 n 125 PRO 125 A n 126 126 A n 127 127 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B n 6 6 B n 7 7 B n 8 8 B n 9 9 B CYS 10 n 10 CYS 10 B PRO 11 n 11 PRO 11 B LEU 12 n 12 LEU 12 B MET 13 n 13 MET 13 B VAL 14 n 14 VAL 14 B LYS 15 n 15 LYS 15 B VAL 16 n 16 VAL 16 B LEU 17 n 17 LEU 17 B ASP 18 n 18 ASP 18 B ALA 19 n 19 ALA 19 B VAL 20 n 20 VAL 20 B ARG 21 n 21 ARG 21 B GLY 22 n 22 GLY 22 B SER 23 n 23 SER 23 B PRO 24 n 24 PRO 24 B ALA 25 n 25 ALA 25 B ILE 26 n 26 ILE 26 B ASN 27 n 27 ASN 27 B VAL 28 n 28 VAL 28 B ALA 29 n 29 ALA 29 B VAL 30 n 30 VAL 30 B HIS 31 n 31 HIS 31 B VAL 32 n 32 VAL 32 B PHE 33 n 33 PHE 33 B ARG 34 n 34 ARG 34 B LYS 35 n 35 LYS 35 B ALA 36 n 36 ALA 36 B ALA 37 n 37 ALA 37 B ASP 38 n 38 ASP 38 B ASP 39 n 39 ASP 39 B THR 40 n 40 THR 40 B TRP 41 n 41 TRP 41 B GLU 42 n 42 GLU 42 B PRO 43 n 43 PRO 43 B PHE 44 n 44 PHE 44 B ALA 45 n 45 ALA 45 B SER 46 n 46 SER 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B THR 49 n 49 THR 49 B SER 50 n 50 SER 50 B GLU 51 n 51 GLU 51 B SER 52 n 52 SER 52 B GLY 53 n 53 GLY 53 B GLU 54 n 54 GLU 54 B LEU 55 n 55 LEU 55 B HIS 56 n 56 HIS 56 B GLY 57 n 57 GLY 57 B LEU 58 n 58 LEU 58 B THR 59 n 59 THR 59 B THR 60 n 60 THR 60 B GLU 61 n 61 GLU 61 B GLU 62 n 62 GLU 62 B GLU 63 n 63 GLU 63 B PHE 64 n 64 PHE 64 B VAL 65 n 65 VAL 65 B GLU 66 n 66 GLU 66 B GLY 67 n 67 GLY 67 B ILE 68 n 68 ILE 68 B TYR 69 n 69 TYR 69 B LYS 70 n 70 LYS 70 B VAL 71 n 71 VAL 71 B GLU 72 n 72 GLU 72 B ILE 73 n 73 ILE 73 B ASP 74 n 74 ASP 74 B THR 75 n 75 THR 75 B LYS 76 n 76 LYS 76 B SER 77 n 77 SER 77 B TYR 78 n 78 TYR 78 B TRP 79 n 79 TRP 79 B LYS 80 n 80 LYS 80 B ALA 81 n 81 ALA 81 B LEU 82 n 82 LEU 82 B GLY 83 n 83 GLY 83 B ILE 84 n 84 ILE 84 B SER 85 n 85 SER 85 B PRO 86 n 86 PRO 86 B PHE 87 n 87 PHE 87 B HIS 88 n 88 HIS 88 B GLU 89 n 89 GLU 89 B HIS 90 n 90 HIS 90 B ALA 91 n 91 ALA 91 B GLU 92 n 92 GLU 92 B VAL 93 n 93 VAL 93 B VAL 94 n 94 VAL 94 B PHE 95 n 95 PHE 95 B THR 96 n 96 THR 96 B ALA 97 n 97 ALA 97 B ASN 98 n 98 ASN 98 B ASP 99 n 99 ASP 99 B SER 100 n 100 SER 100 B GLY 101 n 101 GLY 101 B PRO 102 n 102 PRO 102 B ARG 103 n 103 ARG 103 B ARG 104 n 104 ARG 104 B TYR 105 n 105 TYR 105 B THR 106 n 106 THR 106 B ILE 107 n 107 ILE 107 B ALA 108 n 108 ALA 108 B ALA 109 n 109 ALA 109 B LEU 110 n 110 LEU 110 B LEU 111 n 111 LEU 111 B SER 112 n 112 SER 112 B PRO 113 n 113 PRO 113 B TYR 114 n 114 TYR 114 B SER 115 n 115 SER 115 B TYR 116 n 116 TYR 116 B SER 117 n 117 SER 117 B THR 118 n 118 THR 118 B THR 119 n 119 THR 119 B ALA 120 n 120 ALA 120 B VAL 121 n 121 VAL 121 B VAL 122 n 122 VAL 122 B THR 123 n 123 THR 123 B ASN 124 n 124 ASN 124 B n 125 125 B n 126 126 B n 127 127 B author_and_software_defined_assembly PISA 4 tetrameric 9350 -68 18590 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_455 -x-1,-y,z crystal symmetry operation -43.0900000000 0.0000000000 0.0000000000 A O SER 23 A O SER 23 A N ASP 18 A N ASP 18 A N MET 13 A N MET 13 A O ILE 107 A O ILE 107 A N SER 112 A N SER 112 A O SER 115 A O SER 115 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O THR 119 B O THR 119 B N ALA 108 B N ALA 108 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N ASP 18 B N ASP 18 B O SER 23 B O SER 23 A O LEU 55 A O LEU 55 A N VAL 14 A N VAL 14 A N MET 13 A N MET 13 A O ILE 107 A O ILE 107 A N SER 112 A N SER 112 A O SER 115 A O SER 115 A N TYR 116 A N TYR 116 B O THR 118 B O THR 118 B O THR 119 B O THR 119 B N ALA 108 B N ALA 108 B O LEU 111 B O LEU 111 B N LEU 17 B N LEU 17 B N VAL 14 B N VAL 14 B O LEU 55 B O LEU 55 A O ALA 45 A O ALA 45 A N VAL 32 A N VAL 32 A N HIS 31 A N HIS 31 A O GLU 72 A O GLU 72 A N VAL 71 A N VAL 71 A O VAL 93 A O VAL 93 A N GLU 89 A N GLU 89 B O VAL 94 B O VAL 94 B O VAL 93 B O VAL 93 B N VAL 71 B N VAL 71 B O GLU 72 B O GLU 72 B N HIS 31 B N HIS 31 B N VAL 32 B N VAL 32 B O ALA 45 B O ALA 45 1 B IMN 201 D IMN 1 B HOH 329 F HOH 1 A GLY 1 A GLY 1 1 Y 1 A PRO 2 A PRO 2 1 Y 1 A THR 3 A THR 3 1 Y 1 A GLY 4 A GLY 4 1 Y 1 A THR 5 A THR 5 1 Y 1 A GLY 6 A GLY 6 1 Y 1 A GLU 7 A GLU 7 1 Y 1 A SER 8 A SER 8 1 Y 1 A LYS 9 A LYS 9 1 Y 1 A LYS 126 A LYS 126 1 Y 1 A GLU 127 A GLU 127 1 Y 1 B GLY 1 B GLY 1 1 Y 1 B PRO 2 B PRO 2 1 Y 1 B THR 3 B THR 3 1 Y 1 B GLY 4 B GLY 4 1 Y 1 B THR 5 B THR 5 1 Y 1 B GLY 6 B GLY 6 1 Y 1 B GLU 7 B GLU 7 1 Y 1 B SER 8 B SER 8 1 Y 1 B LYS 9 B LYS 9 1 Y 1 B PRO 125 B PRO 125 1 Y 1 B LYS 126 B LYS 126 1 Y 1 B GLU 127 B GLU 127 1 Y 1 A A OG O SER HOH 77 375 1.70 1 B B NE2 OE2 HIS GLU 90 92 1.89 B 1 B B OD2 O ASP HOH 74 346 1.95 B 1 B B ND1 O HIS HOH 90 348 2.04 1 A ASP 38 -68.89 12.50 74.900 24.9220 9.470 0.6400 0.0000 -0.0000 -0.9900 -0.0000 0.3600 0.9610 0.9260 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES: REFINED INDIVIDUALLY 0.2348 0.1716 0.1746 2.0000 43.1000 830 16452 5.0000 99.1400 0.2199 0.1619 1.000 0.500 0.8674 3.8880 0.1090 0.1940 0.1779 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1940 0.1780 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD MASK 2.0000 43.1000 127 1962 50 0 1785 0.019 0.019 2100 2.134 1.970 2902 6.582 5.000 273 37.120 24.362 94 17.916 15.000 319 18.602 15.000 10 0.142 0.200 309 0.011 0.021 1704 0.3190 0.2130 2.0520 67 1130 1197 20 97.8700 2.000 63.520 4IKI 16478 16478 0.071 0.071 1 20.400 6.500 99.400 0.446 0.410 2.000 2.110 1.800 14790 2328 0.171 0.446 0.410 1 4.300 6.400 98.900 0.294 0.270 2.110 2.240 2.800 14224 2222 0.113 0.294 0.270 1 6.600 6.400 98.900 0.237 0.218 2.240 2.390 3.400 13358 2097 0.091 0.237 0.218 1 8.900 6.400 98.900 0.170 0.157 2.390 2.580 4.800 12448 1940 0.066 0.170 0.157 1 12.200 6.400 99.100 0.118 0.109 2.580 2.830 6.800 11891 1845 0.046 0.118 0.109 1 16.900 6.400 99.800 0.079 0.073 2.830 3.160 9.800 11177 1661 0.030 0.079 0.073 1 24.500 6.700 100.000 0.049 0.045 3.160 3.650 15.000 10190 1486 0.018 0.049 0.045 1 36.200 6.900 100.000 0.039 0.036 3.650 4.470 16.700 8726 1274 0.015 0.039 0.036 1 46.700 6.800 100.000 0.031 0.029 4.470 6.320 18.800 6852 1021 0.012 0.031 0.029 1 53.700 6.700 100.000 0.033 0.030 6.320 43.073 13.000 3679 604 0.014 0.033 0.030 1 48.100 6.100 99.700 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk 21/9/2006 http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package 3.2.25 data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 21/9/2006 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 3.2.25 phasing Alexei Vaguine alexei@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/molrep.html MOLREP program refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection MAR345dtb Crystal structure of wild-type human transthyretin in complex with indomethacin 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A ASP 74 A ASP 74 HELX_P A LEU 82 A LEU 82 1 1 9 B ASP 74 B ASP 74 HELX_P B LEU 82 B LEU 82 1 2 9 TRANSPORT PROTEIN Hormone carrier, Retinol binding protein, TRANSPORT PROTEIN TTHY_HUMAN UNP 1 21 P02766 GPTGTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWK ALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNPKE 21 147 4IKI 1 127 P02766 A 1 1 127 21 147 4IKI 1 127 P02766 B 1 1 127 8 8 8 anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 23 A SER 23 A PRO 24 A PRO 24 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B SER 23 B SER 23 B PRO 24 B PRO 24 A GLU 54 A GLU 54 A LEU 55 A LEU 55 A LEU 12 A LEU 12 A ASP 18 A ASP 18 A ARG 104 A ARG 104 A SER 112 A SER 112 A SER 115 A SER 115 A THR 123 A THR 123 B SER 115 B SER 115 B THR 123 B THR 123 B ARG 104 B ARG 104 B SER 112 B SER 112 B LEU 12 B LEU 12 B ASP 18 B ASP 18 B GLU 54 B GLU 54 B LEU 55 B LEU 55 A TRP 41 A TRP 41 A LYS 48 A LYS 48 A ALA 29 A ALA 29 A LYS 35 A LYS 35 A GLY 67 A GLY 67 A ILE 73 A ILE 73 A HIS 88 A HIS 88 A ALA 97 A ALA 97 B HIS 88 B HIS 88 B ALA 97 B ALA 97 B GLY 67 B GLY 67 B ILE 73 B ILE 73 B ALA 29 B ALA 29 B LYS 35 B LYS 35 B TRP 41 B TRP 41 B LYS 48 B LYS 48 BINDING SITE FOR RESIDUE IMN A 201 A IMN 201 Software 15 BINDING SITE FOR RESIDUE IMN B 201 B IMN 201 Software 14 A LYS 15 A LYS 15 15 1_555 A LYS 15 A LYS 15 15 2_455 A LEU 17 A LEU 17 15 1_555 A LEU 17 A LEU 17 15 2_455 A GLU 54 A GLU 54 15 2_455 A ALA 108 A ALA 108 15 1_555 A ALA 108 A ALA 108 15 2_455 A ALA 109 A ALA 109 15 2_455 A LEU 110 A LEU 110 15 2_455 A SER 117 A SER 117 15 2_455 A THR 118 A THR 118 15 2_455 A THR 119 A THR 119 15 2_455 A VAL 121 A VAL 121 15 2_455 A HOH 350 E HOH 15 2_455 A HOH 378 E HOH 15 2_455 B LYS 15 B LYS 15 14 2_455 B LYS 15 B LYS 15 14 1_555 B LEU 17 B LEU 17 14 1_555 B THR 106 B THR 106 14 2_455 B ALA 108 B ALA 108 14 1_555 B ALA 108 B ALA 108 14 2_455 B SER 117 B SER 117 14 1_555 B THR 118 B THR 118 14 1_555 B THR 119 B THR 119 14 1_555 B VAL 121 B VAL 121 14 2_455 B HOH 333 F HOH 14 1_555 B HOH 333 F HOH 14 2_455 B HOH 345 F HOH 14 1_555 B HOH 345 F HOH 14 2_455 18 P 21 21 2