0.008158 0.004710 0.000000 0.000000 0.009420 0.000000 0.000000 0.000000 0.019560 0.00000 0.00000 0.00000 Prasad, B.V.V. Muhaxhiri, Z. Deng, L. Shanker, S. Sankaran, B. Estes, M.K. Palzkill, T. Song, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 122.575 122.575 51.126 C7 H16 N2 O2 160.214 (4S)-4-amino-5-hydroxy-N,N-dimethylpentanamide N,N-dimethyl-L-glutamine aldehyde, bound form peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C8 H7 Cl O2 170.593 benzyl chlorocarbonate non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C N S -1 58.082 THIOCYANATE ION non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Virol. JOVIAM 0825 0022-538X 87 4281 4292 10.1128/JVI.02869-12 23365454 Structural basis of substrate specificity and protease inhibition in norwalk virus. 2013 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 77 1 CCD 2011-03-10 ADSC QUANTUM 315 ROSENBAUM-ROCK HIGH-RESOLUTION DOUBLE-CRYSTAL MONOCHROMATOR. LN2 COOLED FIRST CRYSTAL, SAGITTAL FOCUSING 2ND CRYSTAL SINGLE WAVELENGTH M x-ray 1 0.97921 1.0 19-ID APS 0.97921 SYNCHROTRON APS BEAMLINE 19-ID 19410.318 Genome polyprotein 3.6.1.15, 3.4.22.66, 2.7.7.48 norwalk virus protease (unp residues 1101-1281) 1 man polymer 573.123 peptide inhibitor, syc 10 1 syn polymer 58.082 THIOCYANATE ION 4 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 220 nat water Protein p48, NTPase, p41, Protein p22, Viral genome-linked protein, VPG, 3C-like protease, 3CLpro, Calicivirin, RNA-directed RNA polymerase, RdRp no no DKAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCP EGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHA AATKSGNTVVCAVQAGEGETALE DKAPPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCP EGTVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHA AATKSGNTVVCAVQAGEGETALE A polypeptide(L) no yes (PHQ)LF(1HB) XLFX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Hu/NV/NV/1968/US GI/Human/United States/Norwalk/1968 sample ORF1 524364 Norovirus Hu/1968/US 562 Escherichia coli 1 2.78 55.69 7 0.1-0.3 M potassium thiocyanate and 25-30% polyethylene glycol monomethyl ether 2,000 , pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K 293.15 repository Initial release Database references 1 0 2013-02-20 1 1 2013-04-10 RCSB Y RCSB 2013-01-03 REL REL SCN THIOCYANATE ION NA SODIUM ION HOH water 32630 synthetic construct sample Inhibitor peptide inhibitor, syc 10 Oligopeptide SCN 201 3 SCN SCN 201 A NA 202 4 NA NA 202 A SCN 203 3 SCN SCN 203 A SCN 204 3 SCN SCN 204 A SCN 205 3 SCN SCN 205 A HOH 1 5 HOH HOH 301 A HOH 2 5 HOH HOH 302 A HOH 3 5 HOH HOH 303 A HOH 4 5 HOH HOH 304 A HOH 5 5 HOH HOH 305 A HOH 6 5 HOH HOH 306 A HOH 7 5 HOH HOH 307 A HOH 8 5 HOH HOH 308 A HOH 9 5 HOH HOH 309 A HOH 10 5 HOH HOH 310 A HOH 11 5 HOH HOH 311 A HOH 12 5 HOH HOH 312 A HOH 13 5 HOH HOH 313 A HOH 14 5 HOH HOH 314 A HOH 15 5 HOH HOH 315 A HOH 16 5 HOH HOH 316 A HOH 17 5 HOH HOH 317 A HOH 18 5 HOH HOH 318 A HOH 19 5 HOH HOH 319 A HOH 20 5 HOH HOH 320 A HOH 21 5 HOH HOH 321 A HOH 22 5 HOH HOH 322 A HOH 23 5 HOH HOH 323 A HOH 24 5 HOH HOH 324 A HOH 25 5 HOH HOH 325 A HOH 26 5 HOH HOH 326 A HOH 27 5 HOH HOH 327 A HOH 28 5 HOH HOH 328 A HOH 29 5 HOH HOH 329 A HOH 30 5 HOH HOH 330 A HOH 31 5 HOH HOH 331 A HOH 32 5 HOH HOH 332 A HOH 33 5 HOH HOH 333 A HOH 34 5 HOH HOH 334 A HOH 35 5 HOH HOH 335 A HOH 36 5 HOH HOH 336 A HOH 37 5 HOH HOH 337 A HOH 38 5 HOH HOH 338 A HOH 39 5 HOH HOH 339 A HOH 40 5 HOH HOH 340 A HOH 41 5 HOH HOH 341 A HOH 42 5 HOH HOH 342 A HOH 43 5 HOH HOH 343 A HOH 44 5 HOH HOH 344 A HOH 45 5 HOH HOH 345 A HOH 46 5 HOH HOH 346 A HOH 47 5 HOH HOH 347 A HOH 48 5 HOH HOH 348 A HOH 49 5 HOH HOH 349 A HOH 50 5 HOH HOH 350 A HOH 51 5 HOH HOH 351 A HOH 52 5 HOH HOH 352 A HOH 53 5 HOH HOH 353 A HOH 54 5 HOH HOH 354 A HOH 55 5 HOH HOH 355 A HOH 56 5 HOH HOH 356 A HOH 57 5 HOH HOH 357 A HOH 58 5 HOH HOH 358 A HOH 59 5 HOH HOH 359 A HOH 60 5 HOH HOH 360 A HOH 61 5 HOH HOH 361 A HOH 62 5 HOH HOH 362 A HOH 63 5 HOH HOH 363 A HOH 64 5 HOH HOH 364 A HOH 65 5 HOH HOH 365 A HOH 66 5 HOH HOH 366 A HOH 67 5 HOH HOH 367 A HOH 68 5 HOH HOH 368 A HOH 69 5 HOH HOH 369 A HOH 70 5 HOH HOH 370 A HOH 71 5 HOH HOH 371 A HOH 72 5 HOH HOH 372 A HOH 73 5 HOH HOH 373 A HOH 74 5 HOH HOH 374 A HOH 75 5 HOH HOH 375 A HOH 76 5 HOH HOH 376 A HOH 77 5 HOH HOH 377 A HOH 78 5 HOH HOH 378 A HOH 79 5 HOH HOH 379 A HOH 80 5 HOH HOH 380 A HOH 81 5 HOH HOH 381 A HOH 82 5 HOH HOH 382 A HOH 83 5 HOH HOH 383 A HOH 84 5 HOH HOH 384 A HOH 85 5 HOH HOH 385 A HOH 86 5 HOH HOH 386 A HOH 87 5 HOH HOH 387 A HOH 88 5 HOH HOH 388 A HOH 89 5 HOH HOH 389 A HOH 90 5 HOH HOH 390 A HOH 91 5 HOH HOH 391 A HOH 92 5 HOH HOH 392 A HOH 93 5 HOH HOH 393 A HOH 94 5 HOH HOH 394 A HOH 95 5 HOH HOH 395 A HOH 96 5 HOH HOH 396 A HOH 97 5 HOH HOH 397 A HOH 98 5 HOH HOH 398 A HOH 99 5 HOH HOH 399 A HOH 100 5 HOH HOH 400 A HOH 101 5 HOH HOH 401 A HOH 102 5 HOH HOH 402 A HOH 103 5 HOH HOH 403 A HOH 104 5 HOH HOH 404 A HOH 105 5 HOH HOH 405 A HOH 106 5 HOH HOH 406 A HOH 107 5 HOH HOH 407 A HOH 108 5 HOH HOH 408 A HOH 109 5 HOH HOH 409 A HOH 110 5 HOH HOH 410 A HOH 111 5 HOH HOH 411 A HOH 112 5 HOH HOH 412 A HOH 113 5 HOH HOH 413 A HOH 114 5 HOH HOH 414 A HOH 115 5 HOH HOH 415 A HOH 116 5 HOH HOH 416 A HOH 117 5 HOH HOH 417 A HOH 118 5 HOH HOH 418 A HOH 119 5 HOH HOH 419 A HOH 120 5 HOH HOH 420 A HOH 121 5 HOH HOH 421 A HOH 122 5 HOH HOH 422 A HOH 123 5 HOH HOH 423 A HOH 124 5 HOH HOH 424 A HOH 125 5 HOH HOH 425 A HOH 126 5 HOH HOH 426 A HOH 127 5 HOH HOH 427 A HOH 128 5 HOH HOH 428 A HOH 129 5 HOH HOH 429 A HOH 131 5 HOH HOH 430 A HOH 132 5 HOH HOH 431 A HOH 133 5 HOH HOH 432 A HOH 134 5 HOH HOH 433 A HOH 135 5 HOH HOH 434 A HOH 136 5 HOH HOH 435 A HOH 137 5 HOH HOH 436 A HOH 138 5 HOH HOH 437 A HOH 139 5 HOH HOH 438 A HOH 141 5 HOH HOH 439 A HOH 142 5 HOH HOH 440 A HOH 143 5 HOH HOH 441 A HOH 144 5 HOH HOH 442 A HOH 145 5 HOH HOH 443 A HOH 146 5 HOH HOH 444 A HOH 147 5 HOH HOH 445 A HOH 148 5 HOH HOH 446 A HOH 149 5 HOH HOH 447 A HOH 150 5 HOH HOH 448 A HOH 151 5 HOH HOH 449 A HOH 152 5 HOH HOH 450 A HOH 153 5 HOH HOH 451 A HOH 154 5 HOH HOH 452 A HOH 156 5 HOH HOH 453 A HOH 157 5 HOH HOH 454 A HOH 158 5 HOH HOH 455 A HOH 159 5 HOH HOH 456 A HOH 160 5 HOH HOH 457 A HOH 161 5 HOH HOH 458 A HOH 162 5 HOH HOH 459 A HOH 165 5 HOH HOH 460 A HOH 166 5 HOH HOH 461 A HOH 168 5 HOH HOH 462 A HOH 169 5 HOH HOH 463 A HOH 170 5 HOH HOH 464 A HOH 171 5 HOH HOH 465 A HOH 173 5 HOH HOH 466 A HOH 174 5 HOH HOH 467 A HOH 175 5 HOH HOH 468 A HOH 176 5 HOH HOH 469 A HOH 177 5 HOH HOH 470 A HOH 178 5 HOH HOH 471 A HOH 179 5 HOH HOH 472 A HOH 180 5 HOH HOH 473 A HOH 181 5 HOH HOH 474 A HOH 182 5 HOH HOH 475 A HOH 183 5 HOH HOH 476 A HOH 478 5 HOH HOH 477 A HOH 185 5 HOH HOH 478 A HOH 186 5 HOH HOH 479 A HOH 187 5 HOH HOH 480 A HOH 189 5 HOH HOH 481 A HOH 190 5 HOH HOH 482 A HOH 191 5 HOH HOH 483 A HOH 192 5 HOH HOH 484 A HOH 193 5 HOH HOH 485 A HOH 194 5 HOH HOH 486 A HOH 195 5 HOH HOH 487 A HOH 196 5 HOH HOH 488 A HOH 197 5 HOH HOH 489 A HOH 198 5 HOH HOH 490 A HOH 199 5 HOH HOH 491 A HOH 200 5 HOH HOH 492 A HOH 201 5 HOH HOH 493 A HOH 202 5 HOH HOH 494 A HOH 203 5 HOH HOH 495 A HOH 204 5 HOH HOH 496 A HOH 205 5 HOH HOH 497 A HOH 206 5 HOH HOH 498 A HOH 207 5 HOH HOH 499 A HOH 208 5 HOH HOH 500 A HOH 209 5 HOH HOH 501 A HOH 210 5 HOH HOH 502 A HOH 211 5 HOH HOH 503 A HOH 212 5 HOH HOH 504 A HOH 213 5 HOH HOH 505 A HOH 214 5 HOH HOH 506 A HOH 215 5 HOH HOH 507 A HOH 216 5 HOH HOH 508 A HOH 217 5 HOH HOH 509 A HOH 218 5 HOH HOH 510 A HOH 219 5 HOH HOH 511 A HOH 220 5 HOH HOH 512 A HOH 221 5 HOH HOH 513 A HOH 222 5 HOH HOH 514 A HOH 223 5 HOH HOH 515 A HOH 224 5 HOH HOH 516 A HOH 225 5 HOH HOH 517 A HOH 1 5 HOH HOH 518 A HOH 130 5 HOH HOH 101 B HOH 167 5 HOH HOH 102 B ASP -1 n 1 ASP -1 A LYS 0 n 2 LYS 0 A ALA 1 n 3 ALA 1 A PRO 2 n 4 PRO 2 A PRO 3 n 5 PRO 3 A THR 4 n 6 THR 4 A LEU 5 n 7 LEU 5 A TRP 6 n 8 TRP 6 A SER 7 n 9 SER 7 A ARG 8 n 10 ARG 8 A VAL 9 n 11 VAL 9 A THR 10 n 12 THR 10 A LYS 11 n 13 LYS 11 A PHE 12 n 14 PHE 12 A GLY 13 n 15 GLY 13 A SER 14 n 16 SER 14 A GLY 15 n 17 GLY 15 A TRP 16 n 18 TRP 16 A GLY 17 n 19 GLY 17 A PHE 18 n 20 PHE 18 A TRP 19 n 21 TRP 19 A VAL 20 n 22 VAL 20 A SER 21 n 23 SER 21 A PRO 22 n 24 PRO 22 A THR 23 n 25 THR 23 A VAL 24 n 26 VAL 24 A PHE 25 n 27 PHE 25 A ILE 26 n 28 ILE 26 A THR 27 n 29 THR 27 A THR 28 n 30 THR 28 A THR 29 n 31 THR 29 A HIS 30 n 32 HIS 30 A VAL 31 n 33 VAL 31 A VAL 32 n 34 VAL 32 A PRO 33 n 35 PRO 33 A THR 34 n 36 THR 34 A GLY 35 n 37 GLY 35 A VAL 36 n 38 VAL 36 A LYS 37 n 39 LYS 37 A GLU 38 n 40 GLU 38 A PHE 39 n 41 PHE 39 A PHE 40 n 42 PHE 40 A GLY 41 n 43 GLY 41 A GLU 42 n 44 GLU 42 A PRO 43 n 45 PRO 43 A LEU 44 n 46 LEU 44 A SER 45 n 47 SER 45 A SER 46 n 48 SER 46 A ILE 47 n 49 ILE 47 A ALA 48 n 50 ALA 48 A ILE 49 n 51 ILE 49 A HIS 50 n 52 HIS 50 A GLN 51 n 53 GLN 51 A ALA 52 n 54 ALA 52 A GLY 53 n 55 GLY 53 A GLU 54 n 56 GLU 54 A PHE 55 n 57 PHE 55 A THR 56 n 58 THR 56 A GLN 57 n 59 GLN 57 A PHE 58 n 60 PHE 58 A ARG 59 n 61 ARG 59 A PHE 60 n 62 PHE 60 A SER 61 n 63 SER 61 A LYS 62 n 64 LYS 62 A LYS 63 n 65 LYS 63 A MET 64 n 66 MET 64 A ARG 65 n 67 ARG 65 A PRO 66 n 68 PRO 66 A ASP 67 n 69 ASP 67 A LEU 68 n 70 LEU 68 A THR 69 n 71 THR 69 A GLY 70 n 72 GLY 70 A MET 71 n 73 MET 71 A VAL 72 n 74 VAL 72 A LEU 73 n 75 LEU 73 A GLU 74 n 76 GLU 74 A GLU 75 n 77 GLU 75 A GLY 76 n 78 GLY 76 A CYS 77 n 79 CYS 77 A PRO 78 n 80 PRO 78 A GLU 79 n 81 GLU 79 A GLY 80 n 82 GLY 80 A THR 81 n 83 THR 81 A VAL 82 n 84 VAL 82 A CYS 83 n 85 CYS 83 A SER 84 n 86 SER 84 A VAL 85 n 87 VAL 85 A LEU 86 n 88 LEU 86 A ILE 87 n 89 ILE 87 A LYS 88 n 90 LYS 88 A ARG 89 n 91 ARG 89 A ASP 90 n 92 ASP 90 A SER 91 n 93 SER 91 A GLY 92 n 94 GLY 92 A GLU 93 n 95 GLU 93 A LEU 94 n 96 LEU 94 A LEU 95 n 97 LEU 95 A PRO 96 n 98 PRO 96 A LEU 97 n 99 LEU 97 A ALA 98 n 100 ALA 98 A VAL 99 n 101 VAL 99 A ARG 100 n 102 ARG 100 A MET 101 n 103 MET 101 A GLY 102 n 104 GLY 102 A ALA 103 n 105 ALA 103 A ILE 104 n 106 ILE 104 A ALA 105 n 107 ALA 105 A SER 106 n 108 SER 106 A MET 107 n 109 MET 107 A ARG 108 n 110 ARG 108 A ILE 109 n 111 ILE 109 A GLN 110 n 112 GLN 110 A GLY 111 n 113 GLY 111 A ARG 112 n 114 ARG 112 A LEU 113 n 115 LEU 113 A VAL 114 n 116 VAL 114 A HIS 115 n 117 HIS 115 A GLY 116 n 118 GLY 116 A GLN 117 n 119 GLN 117 A SER 118 n 120 SER 118 A GLY 119 n 121 GLY 119 A MET 120 n 122 MET 120 A LEU 121 n 123 LEU 121 A LEU 122 n 124 LEU 122 A ALA 123 n 125 THR 123 A n 126 124 A n 127 125 A n 128 126 A n 129 127 A n 130 128 A n 131 129 A n 132 130 A n 133 131 A n 134 132 A GLY 133 n 135 GLY 133 A THR 134 n 136 THR 134 A ILE 135 n 137 ILE 135 A PRO 136 n 138 PRO 136 A GLY 137 n 139 GLY 137 A ASP 138 n 140 ASP 138 A CYS 139 n 141 CYS 139 A GLY 140 n 142 GLY 140 A ALA 141 n 143 ALA 141 A PRO 142 n 144 PRO 142 A TYR 143 n 145 TYR 143 A VAL 144 n 146 VAL 144 A HIS 145 n 147 HIS 145 A LYS 146 n 148 LYS 146 A ARG 147 n 149 ARG 147 A GLY 148 n 150 GLY 148 A ASN 149 n 151 ASN 149 A ASP 150 n 152 ASP 150 A TRP 151 n 153 TRP 151 A VAL 152 n 154 VAL 152 A VAL 153 n 155 VAL 153 A CYS 154 n 156 CYS 154 A GLY 155 n 157 GLY 155 A VAL 156 n 158 VAL 156 A HIS 157 n 159 HIS 157 A ALA 158 n 160 ALA 158 A ALA 159 n 161 ALA 159 A ALA 160 n 162 ALA 160 A THR 161 n 163 THR 161 A LYS 162 n 164 LYS 162 A SER 163 n 165 SER 163 A GLY 164 n 166 GLY 164 A ASN 165 n 167 ASN 165 A THR 166 n 168 THR 166 A VAL 167 n 169 VAL 167 A VAL 168 n 170 VAL 168 A CYS 169 n 171 CYS 169 A ALA 170 n 172 ALA 170 A VAL 171 n 173 VAL 171 A GLN 172 n 174 GLN 172 A ALA 173 n 175 ALA 173 A GLY 174 n 176 GLY 174 A GLU 175 n 177 GLU 175 A GLY 176 n 178 GLY 176 A GLU 177 n 179 GLU 177 A THR 178 n 180 THR 178 A ALA 179 n 181 ALA 179 A n 182 180 A GLU 181 n 183 GLU 181 A PHQ 1 n 1 PHQ 1 B LEU 2 n 2 LEU 2 B PHE 3 n 3 PHE 3 B 1HB 4 n 4 1HB 4 B 0.6612 -0.3667 -0.4874 0.8120 0.2667 0.3959 0.0051 -0.0240 0.0682 -0.0411 0.0195 -0.1274 -0.0382 0.0562 -0.0332 0.0781 0.0183 0.0029 0.0822 -0.0078 0.0686 refined 33.6835 31.1250 -2.9713 X-RAY DIFFRACTION 0.7304 -0.3160 0.0109 0.4363 -0.5028 0.8283 0.0942 -0.1588 0.3000 0.0145 -0.1180 -0.2371 -0.3327 0.5151 0.2237 0.1246 -0.0672 0.0709 0.1632 0.0077 0.2533 refined 44.8852 41.7955 -7.2079 X-RAY DIFFRACTION 0.6959 0.1699 -0.4603 0.0797 -0.1585 0.5738 0.1042 0.1041 0.2978 -0.0557 0.0787 0.0863 -0.1033 -0.0014 -0.1690 0.1585 -0.0034 0.0270 0.1111 0.0070 0.1501 refined 34.7752 44.4193 -4.6527 X-RAY DIFFRACTION 1.4631 -0.0346 0.1806 1.2322 -0.5109 0.2316 -0.0560 0.3350 -0.0666 -0.3730 -0.0084 -0.0184 -0.0765 0.0141 0.0776 0.1627 0.0131 0.0265 0.1378 0.0058 0.0734 refined 32.7726 32.9061 -15.1298 X-RAY DIFFRACTION 0.2748 0.0069 -0.0547 0.4076 0.1730 0.1278 0.0026 -0.0429 0.1299 0.1390 0.0094 -0.0347 0.0582 -0.0970 0.0121 0.1060 0.0191 -0.0006 0.0933 -0.0220 0.0713 refined 27.6007 29.4594 4.0789 X-RAY DIFFRACTION 0.1507 -0.0965 0.0026 0.1379 -0.0584 0.0463 -0.0296 -0.0384 0.0074 0.1316 -0.0073 0.0198 0.0850 0.0656 -0.3470 0.1137 0.0163 0.0328 0.0863 -0.0194 0.0671 refined 28.4910 35.2090 12.7820 X-RAY DIFFRACTION 0.3534 -0.1298 -0.0122 0.8390 0.1478 0.1445 0.0154 -0.0033 0.0064 0.1796 0.0040 0.1192 0.0969 0.0245 0.0127 0.1004 0.0112 0.0127 0.0993 -0.0081 0.0733 refined 27.5847 32.2630 6.9691 X-RAY DIFFRACTION 1.6904 0.0997 1.1340 0.8462 -0.2134 0.8544 0.1463 -0.3727 -0.1541 0.4502 -0.0540 -0.0851 0.1277 -0.0017 0.0113 0.2001 -0.0025 -0.0138 0.1603 0.0140 0.0795 refined 31.2638 33.2055 16.2631 X-RAY DIFFRACTION 0.2976 -0.2227 0.0539 0.5691 -0.1335 0.5403 0.1015 -0.3224 0.1262 0.4242 -0.1372 0.6956 -0.0848 -0.8874 0.0690 0.2535 0.0257 0.0845 0.3330 -0.0590 0.3395 refined 19.0364 46.1824 7.0213 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resseq -1:31) X-RAY DIFFRACTION 2 chain 'A' and (resseq 32:43) X-RAY DIFFRACTION 3 chain 'A' and (resseq 44:60) X-RAY DIFFRACTION 4 chain 'A' and (resseq 61:70) X-RAY DIFFRACTION 5 chain 'A' and (resseq 71:93) X-RAY DIFFRACTION 6 chain 'A' and (resseq 94:111) X-RAY DIFFRACTION 7 chain 'A' and (resseq 112:160) X-RAY DIFFRACTION 8 chain 'A' and (resseq 161:170) X-RAY DIFFRACTION 9 chain 'A' and (resseq 171:181) author_and_software_defined_assembly PISA 4 tetrameric 5360 -52 15720 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_554 x,x-y,-z-1/6 crystal symmetry operation 0.0000000000 0.0000000000 -8.5210000000 A N THR 10 A N THR 12 A O GLY 17 A O GLY 19 A N PHE 18 A N PHE 20 A O ILE 26 A O ILE 28 A N PHE 25 A N PHE 27 A O PHE 58 A O PHE 60 A O GLN 57 A O GLN 59 A N HIS 50 A N HIS 52 A N PHE 39 A N PHE 41 A O GLU 42 A O GLU 44 A N VAL 72 A N VAL 74 A O VAL 153 A O VAL 155 A N VAL 156 A N VAL 158 A O ALA 170 A O ALA 172 A O VAL 167 A O VAL 169 A N GLY 119 A N GLY 121 A O SER 118 A O SER 120 A N GLY 102 A N GLY 104 A O LEU 95 A O LEU 97 A N ILE 87 A N ILE 89 A N SER 84 A N SER 86 A O VAL 144 A O VAL 146 A N ARG 147 A N ARG 149 A O ASP 150 A O ASP 152 1 A OG1 THR 123 A OG1 THR 125 1 Y 1 A CG2 THR 123 A CG2 THR 125 1 Y 1 A GLY 124 A GLY 126 1 Y 1 A ALA 125 A ALA 127 1 Y 1 A ASN 126 A ASN 128 1 Y 1 A ALA 127 A ALA 129 1 Y 1 A LYS 128 A LYS 130 1 Y 1 A GLY 129 A GLY 131 1 Y 1 A MET 130 A MET 132 1 Y 1 A ASP 131 A ASP 133 1 Y 1 A LEU 132 A LEU 134 1 Y 1 A LEU 180 A LEU 182 1 Y 1 A A O O HOH HOH 421 469 1.96 1 A A N O GLY HOH 133 439 2.03 1 A A NH1 O ARG HOH 112 382 2.04 1 A A O O HOH HOH 386 393 2.10 1 A B O O HOH HOH 462 102 2.18 1 A A O O HOH HOH 379 420 2.18 1 A A O O HOH HOH 468 492 2.18 1 A A NZ O LYS HOH 63 467 1.97 1_555 7_554 1 A A O O HOH HOH 516 516 2.09 1_555 10_665 0.14110 -0.00000 -0.00000 0.14110 -0.00000 -0.28220 0.194 0.163 0.164 1.70 35.38 1291 25322 25294 5.100 99.9 0.160 1 1.340 MOLECULAR REPLACEMENT 16.330 0.72 1.00 ML FLAT BULK SOLVENT MODEL 45.56 0.36 1.70 35.38 220 1563 13 0 1330 0.017 1466 1.579 1936 14.576 514 0.102 215 0.007 251 0.2785 0.2067 1.7693 120 2607 99.00 0.2184 0.1827 1.8498 156 2590 100.00 0.1853 0.1555 1.9473 149 2622 100.00 0.2029 0.1528 2.0693 130 2630 100.00 0.1938 0.1510 2.2291 137 2660 100.00 0.1864 0.1596 2.4533 163 2638 100.00 0.2054 0.1702 2.8082 151 2660 100.00 0.2061 0.1631 3.5375 138 2718 100.00 0.1697 0.1585 35.3920 147 2878 100.00 1.700 50.000 4IMZ 25322 2.000 0.07700 1 37.6000 100.0 0.55700 1.70 1.73 6.000 1 11.90 99.8 data collection HKL-3000 phasing PHASER refinement PHENIX (phenix.refine: 1.7_650) data reduction HKL-2000 data scaling HKL-2000 3C-like protease (E.C.3.4.22.66 ) Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus 1 N N 2 N N 3 N N 4 N N 3 N N 3 N N 3 N N 5 N N 5 N N A PRO 2 A PRO 4 HELX_P A ARG 8 A ARG 10 1 1 7 A HIS 30 A HIS 32 HELX_P A VAL 32 A VAL 34 5 2 3 A ILE 135 A ILE 137 HELX_P A CYS 139 A CYS 141 5 3 5 covale 1.283 B PHQ 1 B C1 PHQ 1 1_555 B LEU 2 B N LEU 2 1_555 covale 1.743 A CYS 139 A SG CYS 141 1_555 B 1HB 4 B C 1HB 4 1_555 hydrolase/hydrolase inhibitor protease, hydrolase-hydrolase inhibitor complex POLG_NVN68 UNP 1 1101 Q83883 APPTLWSRVTKFGSGWGFWVSPTVFITTTHVVPTGVKEFFGEPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEGCPEG TVCSVLIKRDSGELLPLAVRMGAIASMRIQGRLVHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAA TKSGNTVVCAVQAGEGETALE 4IMZ PDB 2 4IMZ 1101 1281 4IMZ 1 181 Q83883 A 1 3 183 1 4 4IMZ 1 4 4IMZ B 2 1 4 1 EXPRESSION TAG ASP -1 4IMZ A Q83883 UNP 1 1 EXPRESSION TAG LYS 0 4IMZ A Q83883 UNP 2 5 2 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 9 A VAL 11 A PHE 12 A PHE 14 A GLY 15 A GLY 17 A TRP 19 A TRP 21 A VAL 24 A VAL 26 A THR 28 A THR 30 A PHE 55 A PHE 57 A PHE 60 A PHE 62 A ILE 47 A ILE 49 A ALA 52 A ALA 54 A GLU 38 A GLU 40 A PHE 39 A PHE 41 A GLU 42 A GLU 44 A PRO 43 A PRO 45 A VAL 72 A VAL 74 A LEU 73 A LEU 75 A ASP 150 A ASP 152 A ALA 160 A ALA 162 A THR 166 A THR 168 A ALA 170 A ALA 172 A ARG 112 A ARG 114 A LEU 121 A LEU 123 A LEU 94 A LEU 96 A ILE 109 A ILE 111 A VAL 82 A VAL 84 A LYS 88 A LYS 90 A PRO 142 A PRO 144 A ARG 147 A ARG 149 A ASP 150 A ASP 152 A ALA 160 A ALA 162 BINDING SITE FOR RESIDUE SCN A 201 Software 4 BINDING SITE FOR RESIDUE NA A 202 Software 1 BINDING SITE FOR RESIDUE SCN A 203 Software 7 BINDING SITE FOR RESIDUE SCN A 204 Software 3 BINDING SITE FOR RESIDUE SCN A 205 Software 3 A PRO 2 A PRO 4 4 1_555 A THR 4 A THR 6 4 1_555 A LEU 5 A LEU 7 4 1_555 A ARG 8 A ARG 10 4 1_555 A LYS 0 A LYS 2 1 1_555 A VAL 82 A VAL 84 7 1_555 A SER 84 A SER 86 7 1_555 A HIS 145 A HIS 147 7 1_555 A LYS 146 A LYS 148 7 1_555 A HOH 344 H HOH 7 1_555 A HOH 366 H HOH 7 1_555 A HOH 389 H HOH 7 1_555 A HIS 50 A HIS 52 3 1_555 A GLN 172 A GLN 174 3 1_555 A ALA 173 A ALA 175 3 1_555 A LYS 37 A LYS 39 3 10_665 A HOH 369 H HOH 3 10_665 A HOH 403 H HOH 3 1_555 179 P 65 2 2