0.011394
0.006578
0.000000
0.000000
0.013156
0.000000
0.000000
0.000000
0.013144
0.000000
0.000000
0.000000
Vorobiev, S.
Su, M.
Seetharaman, J.
Maglaqui, M.
Xiao, X.
Kohan, E.
Wang, D.
Everett, J.K.
Acton, T.B.
Montelione, G.T.
Tong, L.
Hunt, J.F.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
87.768
87.768
76.080
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus.
100
1
CCD
2012-12-19
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.97923
1.0
24-ID-E
APS
0.97923
SYNCHROTRON
APS BEAMLINE 24-ID-E
14908.289
Tll1086 protein
1
man
polymer
18.015
water
17
nat
water
no
yes
(MSE)(MSE)TT(MSE)NVLGTPLECCCQNPLTGFYRDGFCRTGAGDVGAHVVCAQ(MSE)TAEFLTFTRSRGNDLSTPV
PAYQFPGLKPGDRWCLCASRWREALEAGVAPPVILEATHASALEYVSLEDLKAHALGGNQQRLEHHHHHH
MMTTMNVLGTPLECCCQNPLTGFYRDGFCRTGAGDVGAHVVCAQMTAEFLTFTRSRGNDLSTPVPAYQFPGLKPGDRWCL
CASRWREALEAGVAPPVILEATHASALEYVSLEDLKAHALGGNQQRLEHHHHHH
A
NESG-TeR258
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BP-1
sample
tll1086
197221
Thermosynechococcus elongatus
469008
Escherichia coli
BL21(DE3)+ Magic
pET21_NESG
plasmid
TeR258-21.4
1
2.84
56.64
Microbatch crystallization under oil
8.0
1.11M sodium phosphate, 0.1M Tris-HCl, pH 8.0, Microbatch crystallization under oil, temperature 291K
291
Northeast Structural Genomics Consortium
NESG
PSI:Biology
repository
Initial release
Data collection
1
0
2013-01-30
1
1
2013-11-20
Y
RCSB
Y
RCSB
2013-01-07
REL
REL
HOH
water
WAT
201
2
HOH
HOH
201
A
WAT
202
2
HOH
HOH
202
A
WAT
203
2
HOH
HOH
203
A
WAT
204
2
HOH
HOH
204
A
WAT
205
2
HOH
HOH
205
A
WAT
206
2
HOH
HOH
206
A
WAT
208
2
HOH
HOH
207
A
WAT
209
2
HOH
HOH
208
A
WAT
211
2
HOH
HOH
209
A
WAT
212
2
HOH
HOH
210
A
WAT
214
2
HOH
HOH
211
A
WAT
215
2
HOH
HOH
212
A
WAT
216
2
HOH
HOH
213
A
WAT
217
2
HOH
HOH
214
A
WAT
218
2
HOH
HOH
215
A
WAT
219
2
HOH
HOH
216
A
WAT
220
2
HOH
HOH
217
A
n
1
1
A
MSE
2
n
2
MSE
2
A
THR
3
n
3
THR
3
A
THR
4
n
4
THR
4
A
MSE
5
n
5
MSE
5
A
ASN
6
n
6
ASN
6
A
VAL
7
n
7
VAL
7
A
LEU
8
n
8
LEU
8
A
GLY
9
n
9
GLY
9
A
THR
10
n
10
THR
10
A
PRO
11
n
11
PRO
11
A
LEU
12
n
12
LEU
12
A
GLU
13
n
13
GLU
13
A
CYS
14
n
14
CYS
14
A
CYS
15
n
15
CYS
15
A
CYS
16
n
16
CYS
16
A
GLN
17
n
17
GLN
17
A
ASN
18
n
18
ASN
18
A
PRO
19
n
19
PRO
19
A
LEU
20
n
20
LEU
20
A
THR
21
n
21
THR
21
A
GLY
22
n
22
GLY
22
A
PHE
23
n
23
PHE
23
A
TYR
24
n
24
TYR
24
A
ARG
25
n
25
ARG
25
A
ASP
26
n
26
ASP
26
A
GLY
27
n
27
GLY
27
A
PHE
28
n
28
PHE
28
A
CYS
29
n
29
CYS
29
A
ARG
30
n
30
ARG
30
A
THR
31
n
31
THR
31
A
GLY
32
n
32
GLY
32
A
ALA
33
n
33
ALA
33
A
GLY
34
n
34
GLY
34
A
ASP
35
n
35
ASP
35
A
VAL
36
n
36
VAL
36
A
GLY
37
n
37
GLY
37
A
ALA
38
n
38
ALA
38
A
HIS
39
n
39
HIS
39
A
VAL
40
n
40
VAL
40
A
VAL
41
n
41
VAL
41
A
CYS
42
n
42
CYS
42
A
ALA
43
n
43
ALA
43
A
GLN
44
n
44
GLN
44
A
MSE
45
n
45
MSE
45
A
THR
46
n
46
THR
46
A
ALA
47
n
47
ALA
47
A
GLU
48
n
48
GLU
48
A
PHE
49
n
49
PHE
49
A
LEU
50
n
50
LEU
50
A
THR
51
n
51
THR
51
A
PHE
52
n
52
PHE
52
A
THR
53
n
53
THR
53
A
ARG
54
n
54
ARG
54
A
SER
55
n
55
SER
55
A
ARG
56
n
56
ARG
56
A
GLY
57
n
57
GLY
57
A
ASN
58
n
58
ASN
58
A
ASP
59
n
59
ASP
59
A
LEU
60
n
60
LEU
60
A
SER
61
n
61
SER
61
A
THR
62
n
62
THR
62
A
PRO
63
n
63
PRO
63
A
VAL
64
n
64
VAL
64
A
PRO
65
n
65
PRO
65
A
ALA
66
n
66
ALA
66
A
TYR
67
n
67
TYR
67
A
GLN
68
n
68
GLN
68
A
PHE
69
n
69
PHE
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
LEU
72
n
72
LEU
72
A
LYS
73
n
73
LYS
73
A
PRO
74
n
74
PRO
74
A
GLY
75
n
75
GLY
75
A
ASP
76
n
76
ASP
76
A
ARG
77
n
77
ARG
77
A
TRP
78
n
78
TRP
78
A
CYS
79
n
79
CYS
79
A
LEU
80
n
80
LEU
80
A
CYS
81
n
81
CYS
81
A
ALA
82
n
82
ALA
82
A
SER
83
n
83
SER
83
A
ARG
84
n
84
ARG
84
A
TRP
85
n
85
TRP
85
A
ARG
86
n
86
ARG
86
A
GLU
87
n
87
GLU
87
A
ALA
88
n
88
ALA
88
A
LEU
89
n
89
LEU
89
A
GLU
90
n
90
GLU
90
A
ALA
91
n
91
ALA
91
A
GLY
92
n
92
GLY
92
A
VAL
93
n
93
VAL
93
A
ALA
94
n
94
ALA
94
A
PRO
95
n
95
PRO
95
A
PRO
96
n
96
PRO
96
A
VAL
97
n
97
VAL
97
A
ILE
98
n
98
ILE
98
A
LEU
99
n
99
LEU
99
A
GLU
100
n
100
GLU
100
A
ALA
101
n
101
ALA
101
A
THR
102
n
102
THR
102
A
HIS
103
n
103
HIS
103
A
ALA
104
n
104
ALA
104
A
SER
105
n
105
SER
105
A
ALA
106
n
106
ALA
106
A
LEU
107
n
107
LEU
107
A
GLU
108
n
108
GLU
108
A
TYR
109
n
109
TYR
109
A
VAL
110
n
110
VAL
110
A
SER
111
n
111
SER
111
A
LEU
112
n
112
LEU
112
A
GLU
113
n
113
GLU
113
A
ASP
114
n
114
ASP
114
A
LEU
115
n
115
LEU
115
A
LYS
116
n
116
LYS
116
A
ALA
117
n
117
ALA
117
A
HIS
118
n
118
HIS
118
A
ALA
119
n
119
ALA
119
A
LEU
120
n
120
LEU
120
A
GLY
121
n
121
GLY
121
A
n
122
122
A
n
123
123
A
n
124
124
A
n
125
125
A
n
126
126
A
n
127
127
A
n
128
128
A
n
129
129
A
n
130
130
A
n
131
131
A
n
132
132
A
n
133
133
A
n
134
134
A
author_and_software_defined_assembly
PISA
2
dimeric
2960
-25
11950
A
MSE
2
SELENOMETHIONINE
A
MSE
2
MET
A
MSE
5
SELENOMETHIONINE
A
MSE
5
MET
A
MSE
45
SELENOMETHIONINE
A
MSE
45
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_555
x,x-y,-z+1/6
crystal symmetry operation
0.0000000000
0.0000000000
12.6800000000
A
N
ALA
43
A
N
ALA
43
A
O
TRP
78
A
O
TRP
78
1
A
HOH
213
B
HOH
1
A
HOH
216
B
HOH
1
A
MSE
1
A
MSE
1
1
Y
1
A
GLY
122
A
GLY
122
1
Y
1
A
ASN
123
A
ASN
123
1
Y
1
A
GLN
124
A
GLN
124
1
Y
1
A
GLN
125
A
GLN
125
1
Y
1
A
ARG
126
A
ARG
126
1
Y
1
A
LEU
127
A
LEU
127
1
Y
1
A
GLU
128
A
GLU
128
1
Y
1
A
HIS
129
A
HIS
129
1
Y
1
A
HIS
130
A
HIS
130
1
Y
1
A
HIS
131
A
HIS
131
1
Y
1
A
HIS
132
A
HIS
132
1
Y
1
A
HIS
133
A
HIS
133
1
Y
1
A
HIS
134
A
HIS
134
1
Y
1
A
CYS
29
-77.23
49.03
1
A
VAL
64
-163.13
96.52
1
A
PRO
65
-79.78
43.37
1
A
GLN
68
57.47
70.22
1
A
HIS
118
-105.61
45.52
1
A
ALA
119
-75.30
-154.40
155.41
91.813
39.61
1.604
-0.000
-0.000
1.604
0.000
-3.207
Cys15 makes a disulfide bond with Cys42 form symmetry-related mate (x,x-y,-z+1/6 + (0 0 0))
0.292
0.240
0.243
2.530
33.999
485
10899
4.450
99.450
1.00
0.47
0.690
RANDOM
1
THROUGHOUT
1.35
SAD
29.510
0.730
1.000
ML
FLAT BULK SOLVENT MODEL
71.871
0.332
2.530
33.999
17
919
0
0
902
0.010
928
1.399
1259
0.082
141
0.006
165
18.884
328
0.358
0.356
2.5711
154
3459
3613
3
99.000
0.316
0.265
3.647
179
3487
3666
3
100.000
0.270
0.215
34.002
152
3468
3620
3
99.000
2.53
50
4IOH
10991
10905
0.0
0.0
0.054
1
30.5
13.6
99.2
0.0127
2.53
2.65
2.2
1422
1
14.3
99.2
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.2_869
data extraction
PDB
help@deposit.rcsb.org
Jan. 22, 2010
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.100
data collection
ADSC
Quantum
data reduction
XDS
data scaling
XSCALE
phasing
AutoSol
Tll1086 protein
Crystal Structure of the Tll1086 protein from Thermosynechococcus elongatus, Northeast Structural Genomics Consortium Target TeR258
1
N
N
2
N
N
dimer,35.35 kD,91.5%, heptamer,109.8 kD,4.5%
A
THR
46
A
THR
46
HELX_P
A
GLY
57
A
GLY
57
1
1
12
A
ALA
82
A
ALA
82
HELX_P
A
ALA
91
A
ALA
91
1
2
10
A
ILE
98
A
ILE
98
HELX_P
A
THR
102
A
THR
102
5
3
5
A
HIS
103
A
HIS
103
HELX_P
A
TYR
109
A
TYR
109
5
4
7
A
SER
111
A
SER
111
HELX_P
A
HIS
118
A
HIS
118
1
5
8
disulf
2.023
A
CYS
14
A
SG
CYS
14
1_555
A
CYS
16
A
SG
CYS
16
1_555
disulf
2.070
A
CYS
15
A
SG
CYS
15
1_555
A
CYS
42
A
SG
CYS
42
12_555
disulf
2.042
A
CYS
29
A
SG
CYS
29
1_555
A
CYS
79
A
SG
CYS
79
1_555
covale
1.333
A
MSE
2
A
C
MSE
2
1_555
A
THR
3
A
N
THR
3
1_555
covale
1.338
A
THR
4
A
C
THR
4
1_555
A
MSE
5
A
N
MSE
5
1_555
covale
1.333
A
MSE
5
A
C
MSE
5
1_555
A
ASN
6
A
N
ASN
6
1_555
covale
1.324
A
GLN
44
A
C
GLN
44
1_555
A
MSE
45
A
N
MSE
45
1_555
covale
1.338
A
MSE
45
A
C
MSE
45
1_555
A
THR
46
A
N
THR
46
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION
A
ASN
18
A
ASN
18
1
A
PRO
19
A
PRO
19
10.23
Q8DJY4_THEEB
UNP
1
1
Q8DJY4
MMTTMNVLGTPLECCCQNPLTGFYRDGFCRTGAGDVGAHVVCAQMTAEFLTFTRSRGNDLSTPVPAYQFPGLKPGDRWCL
CASRWREALEAGVAPPVILEATHASALEYVSLEDLKAHALGGNQQR
1
126
4IOH
1
126
Q8DJY4
A
1
1
126
1
EXPRESSION TAG
LEU
127
4IOH
A
Q8DJY4
UNP
127
1
EXPRESSION TAG
GLU
128
4IOH
A
Q8DJY4
UNP
128
1
EXPRESSION TAG
HIS
129
4IOH
A
Q8DJY4
UNP
129
1
EXPRESSION TAG
HIS
130
4IOH
A
Q8DJY4
UNP
130
1
EXPRESSION TAG
HIS
131
4IOH
A
Q8DJY4
UNP
131
1
EXPRESSION TAG
HIS
132
4IOH
A
Q8DJY4
UNP
132
1
EXPRESSION TAG
HIS
133
4IOH
A
Q8DJY4
UNP
133
1
EXPRESSION TAG
HIS
134
4IOH
A
Q8DJY4
UNP
134
2
anti-parallel
A
HIS
39
A
HIS
39
A
GLN
44
A
GLN
44
A
ARG
77
A
ARG
77
A
CYS
81
A
CYS
81
178
P 61 2 2