0.021316
0.000000
0.000000
0.000000
0.011792
0.000000
0.000000
0.000000
0.008734
0.00000
0.00000
0.00000
Gouge, J.
Delarue, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
46.913
84.804
114.493
C17 H12 F N O5
329.279
(2Z,5E)-6-[4-(4-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
N
2
N
O
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
F
N
7
N
C
N
8
N
C
N
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
N
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
C
Y
21
N
C
Y
22
N
C
Y
23
N
C
Y
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
N
N
38
S
C
N
39
N
C
N
40
N
O
N
41
N
C
N
42
N
O
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
N
N
51
S
C
N
52
N
C
N
53
N
O
N
54
N
C
N
55
N
C
N
56
N
C
N
57
N
N
N
58
N
C
N
59
N
N
N
60
N
N
N
61
N
O
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
N
N
78
S
C
N
79
N
C
N
80
N
O
N
81
N
C
N
82
N
C
N
83
N
O
N
84
N
N
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
O
N
101
N
O
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
R
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
S
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
O
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
N
N
174
S
C
N
175
N
C
N
176
N
O
N
177
N
C
Y
178
N
C
Y
179
N
N
Y
180
N
C
Y
181
N
C
Y
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
S
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
N
N
250
N
O
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
S
N
273
N
C
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
NA
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
N
298
N
O
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
C
N
316
N
C
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
O
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
R
C
N
346
N
O
N
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
N
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
N
N
386
S
C
N
387
N
C
N
388
N
O
N
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
N
396
N
O
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
N
414
N
C
N
415
N
C
N
416
N
O
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
E
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
N
13
N
sing
Y
14
N
doub
N
15
N
sing
Y
16
N
doub
N
17
N
sing
N
18
N
sing
N
19
N
sing
Y
20
N
doub
Y
21
N
sing
N
22
N
sing
Y
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
Z
doub
N
30
N
doub
Y
31
N
sing
Y
32
N
sing
Y
33
N
sing
N
34
N
sing
Y
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
Y
177
N
sing
Y
178
N
doub
Y
179
N
doub
N
180
N
sing
Y
181
N
sing
N
182
N
sing
Y
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
Y
285
N
doub
Y
286
N
sing
Y
287
N
sing
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
56
7431
7441
10.1021/jm4010187
23968551
New nucleotide-competitive non-nucleoside inhibitors of terminal deoxynucleotidyl transferase: discovery, characterization, and crystal structure in complex with the target.
2013
10.2210/pdb4iqu/pdb
pdb_00004iqu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2011-11-14
MARMOSAIC 225 mm CCD
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.872600
1.0
ID23-2
ESRF
0.872600
SYNCHROTRON
ESRF BEAMLINE ID23-2
45704.020
DNA nucleotidylexotransferase
2.7.7.31
SEE REMARK 999
1
man
polymer
DSP
22.990
SODIUM ION
1
syn
non-polymer
329.279
(2Z,5E)-6-[4-(4-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid
1
syn
non-polymer
18.015
water
270
nat
water
Terminal addition enzyme, Terminal deoxynucleotidyltransferase, TDT, Terminal transferase
no
no
HMSPSPVPGSQNVPAPAVKKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMK
DTEGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQ
KAGFLYYEDLVSCVNRPEAEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFW
KQQGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLG
WTGSRQFERDLRRYATHERKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNAMGSSHHHHHHSSGLVPRGS
HMSPSPVPGSQNVPAPAVKKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMK
DTEGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQ
KAGFLYYEDLVSCVNRPEAEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFW
KQQGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLG
WTGSRQFERDLRRYATHERKMMLDNHALYDRTKRVFLEAESEEEIFAHLGLDYIEPWERNAMGSSHHHHHHSSGLVPRGS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse
sample
3
353
Dntt, Tdt
10090
Mus musculus
562
Escherichia coli
mouse
sample
354
381
Dntt, Tdt
10090
Mus musculus
562
Escherichia coli
1
2.49
50.63
VAPOR DIFFUSION, HANGING DROP
6.0
20% PEG4000, 200 mM sodium formate, 100 mM MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
entity_src_gen
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
entity
pdbx_entity_src_syn
repository
Initial release
Database references
Refinement description
Source and taxonomy
Data collection
Database references
Derived calculations
Refinement description
Source and taxonomy
Structure summary
1
0
2013-09-04
1
1
2013-10-09
1
2
2017-07-26
1
3
2023-09-20
1
4
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_entity.details
RCSB
Y
RCSB
2013-01-13
REL
REL
NA
SODIUM ION
1FQ
(2Z,5E)-6-[4-(4-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid
HOH
water
PROTEIN FRAGMENT IS THE CATALYTIC CORE OF THE TDT-S (TDT-SMALL) ISOFORM (UNP RESIDUES 132-482, 503-530).
1JMS
PDB ENTRY 1JMS
PDB
experimental model
NA
702
2
NA
NA
601
A
1FQ
1
3
1FQ
1FQ
602
A
HOH
1
4
HOH
HOH
701
A
HOH
2
4
HOH
HOH
702
A
HOH
3
4
HOH
HOH
703
A
HOH
4
4
HOH
HOH
704
A
HOH
5
4
HOH
HOH
705
A
HOH
6
4
HOH
HOH
706
A
HOH
7
4
HOH
HOH
707
A
HOH
8
4
HOH
HOH
708
A
HOH
9
4
HOH
HOH
709
A
HOH
10
4
HOH
HOH
710
A
HOH
11
4
HOH
HOH
711
A
HOH
12
4
HOH
HOH
712
A
HOH
13
4
HOH
HOH
713
A
HOH
14
4
HOH
HOH
714
A
HOH
15
4
HOH
HOH
715
A
HOH
16
4
HOH
HOH
716
A
HOH
17
4
HOH
HOH
717
A
HOH
18
4
HOH
HOH
718
A
HOH
19
4
HOH
HOH
719
A
HOH
20
4
HOH
HOH
720
A
HOH
21
4
HOH
HOH
721
A
HOH
22
4
HOH
HOH
722
A
HOH
23
4
HOH
HOH
723
A
HOH
24
4
HOH
HOH
724
A
HOH
25
4
HOH
HOH
725
A
HOH
26
4
HOH
HOH
726
A
HOH
27
4
HOH
HOH
727
A
HOH
28
4
HOH
HOH
728
A
HOH
29
4
HOH
HOH
729
A
HOH
30
4
HOH
HOH
730
A
HOH
31
4
HOH
HOH
731
A
HOH
32
4
HOH
HOH
732
A
HOH
33
4
HOH
HOH
733
A
HOH
34
4
HOH
HOH
734
A
HOH
35
4
HOH
HOH
735
A
HOH
36
4
HOH
HOH
736
A
HOH
37
4
HOH
HOH
737
A
HOH
38
4
HOH
HOH
738
A
HOH
39
4
HOH
HOH
739
A
HOH
40
4
HOH
HOH
740
A
HOH
41
4
HOH
HOH
741
A
HOH
42
4
HOH
HOH
742
A
HOH
43
4
HOH
HOH
743
A
HOH
44
4
HOH
HOH
744
A
HOH
45
4
HOH
HOH
745
A
HOH
46
4
HOH
HOH
746
A
HOH
47
4
HOH
HOH
747
A
HOH
48
4
HOH
HOH
748
A
HOH
49
4
HOH
HOH
749
A
HOH
50
4
HOH
HOH
750
A
HOH
51
4
HOH
HOH
751
A
HOH
52
4
HOH
HOH
752
A
HOH
53
4
HOH
HOH
753
A
HOH
54
4
HOH
HOH
754
A
HOH
55
4
HOH
HOH
755
A
HOH
56
4
HOH
HOH
756
A
HOH
57
4
HOH
HOH
757
A
HOH
58
4
HOH
HOH
758
A
HOH
59
4
HOH
HOH
759
A
HOH
60
4
HOH
HOH
760
A
HOH
61
4
HOH
HOH
761
A
HOH
62
4
HOH
HOH
762
A
HOH
63
4
HOH
HOH
763
A
HOH
64
4
HOH
HOH
764
A
HOH
65
4
HOH
HOH
765
A
HOH
66
4
HOH
HOH
766
A
HOH
67
4
HOH
HOH
767
A
HOH
68
4
HOH
HOH
768
A
HOH
69
4
HOH
HOH
769
A
HOH
70
4
HOH
HOH
770
A
HOH
71
4
HOH
HOH
771
A
HOH
72
4
HOH
HOH
772
A
HOH
73
4
HOH
HOH
773
A
HOH
74
4
HOH
HOH
774
A
HOH
75
4
HOH
HOH
775
A
HOH
76
4
HOH
HOH
776
A
HOH
77
4
HOH
HOH
777
A
HOH
78
4
HOH
HOH
778
A
HOH
79
4
HOH
HOH
779
A
HOH
80
4
HOH
HOH
780
A
HOH
81
4
HOH
HOH
781
A
HOH
82
4
HOH
HOH
782
A
HOH
83
4
HOH
HOH
783
A
HOH
84
4
HOH
HOH
784
A
HOH
85
4
HOH
HOH
785
A
HOH
86
4
HOH
HOH
786
A
HOH
87
4
HOH
HOH
787
A
HOH
88
4
HOH
HOH
788
A
HOH
89
4
HOH
HOH
789
A
HOH
90
4
HOH
HOH
790
A
HOH
91
4
HOH
HOH
791
A
HOH
92
4
HOH
HOH
792
A
HOH
93
4
HOH
HOH
793
A
HOH
94
4
HOH
HOH
794
A
HOH
95
4
HOH
HOH
795
A
HOH
96
4
HOH
HOH
796
A
HOH
97
4
HOH
HOH
797
A
HOH
98
4
HOH
HOH
798
A
HOH
99
4
HOH
HOH
799
A
HOH
100
4
HOH
HOH
800
A
HOH
101
4
HOH
HOH
801
A
HOH
102
4
HOH
HOH
802
A
HOH
103
4
HOH
HOH
803
A
HOH
104
4
HOH
HOH
804
A
HOH
105
4
HOH
HOH
805
A
HOH
106
4
HOH
HOH
806
A
HOH
107
4
HOH
HOH
807
A
HOH
108
4
HOH
HOH
808
A
HOH
109
4
HOH
HOH
809
A
HOH
110
4
HOH
HOH
810
A
HOH
111
4
HOH
HOH
811
A
HOH
112
4
HOH
HOH
812
A
HOH
113
4
HOH
HOH
813
A
HOH
114
4
HOH
HOH
814
A
HOH
115
4
HOH
HOH
815
A
HOH
116
4
HOH
HOH
816
A
HOH
117
4
HOH
HOH
817
A
HOH
118
4
HOH
HOH
818
A
HOH
119
4
HOH
HOH
819
A
HOH
120
4
HOH
HOH
820
A
HOH
121
4
HOH
HOH
821
A
HOH
122
4
HOH
HOH
822
A
HOH
123
4
HOH
HOH
823
A
HOH
124
4
HOH
HOH
824
A
HOH
125
4
HOH
HOH
825
A
HOH
126
4
HOH
HOH
826
A
HOH
127
4
HOH
HOH
827
A
HOH
128
4
HOH
HOH
828
A
HOH
129
4
HOH
HOH
829
A
HOH
130
4
HOH
HOH
830
A
HOH
131
4
HOH
HOH
831
A
HOH
132
4
HOH
HOH
832
A
HOH
133
4
HOH
HOH
833
A
HOH
134
4
HOH
HOH
834
A
HOH
135
4
HOH
HOH
835
A
HOH
136
4
HOH
HOH
836
A
HOH
137
4
HOH
HOH
837
A
HOH
138
4
HOH
HOH
838
A
HOH
139
4
HOH
HOH
839
A
HOH
140
4
HOH
HOH
840
A
HOH
141
4
HOH
HOH
841
A
HOH
142
4
HOH
HOH
842
A
HOH
143
4
HOH
HOH
843
A
HOH
144
4
HOH
HOH
844
A
HOH
145
4
HOH
HOH
845
A
HOH
146
4
HOH
HOH
846
A
HOH
147
4
HOH
HOH
847
A
HOH
148
4
HOH
HOH
848
A
HOH
149
4
HOH
HOH
849
A
HOH
150
4
HOH
HOH
850
A
HOH
151
4
HOH
HOH
851
A
HOH
152
4
HOH
HOH
852
A
HOH
153
4
HOH
HOH
853
A
HOH
154
4
HOH
HOH
854
A
HOH
155
4
HOH
HOH
855
A
HOH
156
4
HOH
HOH
856
A
HOH
157
4
HOH
HOH
857
A
HOH
158
4
HOH
HOH
858
A
HOH
159
4
HOH
HOH
859
A
HOH
160
4
HOH
HOH
860
A
HOH
161
4
HOH
HOH
861
A
HOH
162
4
HOH
HOH
862
A
HOH
163
4
HOH
HOH
863
A
HOH
164
4
HOH
HOH
864
A
HOH
165
4
HOH
HOH
865
A
HOH
166
4
HOH
HOH
866
A
HOH
167
4
HOH
HOH
867
A
HOH
168
4
HOH
HOH
868
A
HOH
169
4
HOH
HOH
869
A
HOH
170
4
HOH
HOH
870
A
HOH
171
4
HOH
HOH
871
A
HOH
172
4
HOH
HOH
872
A
HOH
173
4
HOH
HOH
873
A
HOH
174
4
HOH
HOH
874
A
HOH
175
4
HOH
HOH
875
A
HOH
176
4
HOH
HOH
876
A
HOH
177
4
HOH
HOH
877
A
HOH
178
4
HOH
HOH
878
A
HOH
179
4
HOH
HOH
879
A
HOH
180
4
HOH
HOH
880
A
HOH
181
4
HOH
HOH
881
A
HOH
182
4
HOH
HOH
882
A
HOH
183
4
HOH
HOH
883
A
HOH
184
4
HOH
HOH
884
A
HOH
185
4
HOH
HOH
885
A
HOH
186
4
HOH
HOH
886
A
HOH
187
4
HOH
HOH
887
A
HOH
188
4
HOH
HOH
888
A
HOH
189
4
HOH
HOH
889
A
HOH
190
4
HOH
HOH
890
A
HOH
191
4
HOH
HOH
891
A
HOH
192
4
HOH
HOH
892
A
HOH
193
4
HOH
HOH
893
A
HOH
194
4
HOH
HOH
894
A
HOH
195
4
HOH
HOH
895
A
HOH
196
4
HOH
HOH
896
A
HOH
197
4
HOH
HOH
897
A
HOH
198
4
HOH
HOH
898
A
HOH
199
4
HOH
HOH
899
A
HOH
200
4
HOH
HOH
900
A
HOH
201
4
HOH
HOH
901
A
HOH
202
4
HOH
HOH
902
A
HOH
203
4
HOH
HOH
903
A
HOH
204
4
HOH
HOH
904
A
HOH
205
4
HOH
HOH
905
A
HOH
206
4
HOH
HOH
906
A
HOH
207
4
HOH
HOH
907
A
HOH
208
4
HOH
HOH
908
A
HOH
209
4
HOH
HOH
909
A
HOH
210
4
HOH
HOH
910
A
HOH
211
4
HOH
HOH
911
A
HOH
212
4
HOH
HOH
912
A
HOH
213
4
HOH
HOH
913
A
HOH
214
4
HOH
HOH
914
A
HOH
215
4
HOH
HOH
915
A
HOH
216
4
HOH
HOH
916
A
HOH
217
4
HOH
HOH
917
A
HOH
218
4
HOH
HOH
918
A
HOH
219
4
HOH
HOH
919
A
HOH
220
4
HOH
HOH
920
A
HOH
221
4
HOH
HOH
921
A
HOH
222
4
HOH
HOH
922
A
HOH
223
4
HOH
HOH
923
A
HOH
224
4
HOH
HOH
924
A
HOH
225
4
HOH
HOH
925
A
HOH
226
4
HOH
HOH
926
A
HOH
227
4
HOH
HOH
927
A
HOH
228
4
HOH
HOH
928
A
HOH
229
4
HOH
HOH
929
A
HOH
230
4
HOH
HOH
930
A
HOH
231
4
HOH
HOH
931
A
HOH
232
4
HOH
HOH
932
A
HOH
233
4
HOH
HOH
933
A
HOH
234
4
HOH
HOH
934
A
HOH
235
4
HOH
HOH
935
A
HOH
236
4
HOH
HOH
936
A
HOH
237
4
HOH
HOH
937
A
HOH
238
4
HOH
HOH
938
A
HOH
239
4
HOH
HOH
939
A
HOH
240
4
HOH
HOH
940
A
HOH
241
4
HOH
HOH
941
A
HOH
242
4
HOH
HOH
942
A
HOH
243
4
HOH
HOH
943
A
HOH
244
4
HOH
HOH
944
A
HOH
245
4
HOH
HOH
945
A
HOH
246
4
HOH
HOH
946
A
HOH
247
4
HOH
HOH
947
A
HOH
248
4
HOH
HOH
948
A
HOH
249
4
HOH
HOH
949
A
HOH
250
4
HOH
HOH
950
A
HOH
251
4
HOH
HOH
951
A
HOH
252
4
HOH
HOH
952
A
HOH
253
4
HOH
HOH
953
A
HOH
254
4
HOH
HOH
954
A
HOH
255
4
HOH
HOH
955
A
HOH
256
4
HOH
HOH
956
A
HOH
257
4
HOH
HOH
957
A
HOH
258
4
HOH
HOH
958
A
HOH
259
4
HOH
HOH
959
A
HOH
260
4
HOH
HOH
960
A
HOH
261
4
HOH
HOH
961
A
HOH
262
4
HOH
HOH
962
A
HOH
263
4
HOH
HOH
963
A
HOH
264
4
HOH
HOH
964
A
HOH
265
4
HOH
HOH
965
A
HOH
266
4
HOH
HOH
966
A
HOH
267
4
HOH
HOH
967
A
HOH
268
4
HOH
HOH
968
A
HOH
269
4
HOH
HOH
969
A
HOH
270
4
HOH
HOH
970
A
n
1
130
A
n
2
131
A
n
3
132
A
n
4
133
A
n
5
134
A
n
6
135
A
n
7
136
A
n
8
137
A
n
9
138
A
n
10
139
A
n
11
140
A
n
12
141
A
n
13
142
A
n
14
143
A
n
15
144
A
n
16
145
A
n
17
146
A
n
18
147
A
n
19
148
A
LYS
149
n
20
LYS
149
A
ILE
150
n
21
ILE
150
A
SER
151
n
22
SER
151
A
GLN
152
n
23
GLN
152
A
TYR
153
n
24
TYR
153
A
ALA
154
n
25
ALA
154
A
CYS
155
n
26
CYS
155
A
GLN
156
n
27
GLN
156
A
ARG
157
n
28
ARG
157
A
ARG
158
n
29
ARG
158
A
THR
159
n
30
THR
159
A
THR
160
n
31
THR
160
A
LEU
161
n
32
LEU
161
A
ASN
162
n
33
ASN
162
A
ASN
163
n
34
ASN
163
A
TYR
164
n
35
TYR
164
A
ASN
165
n
36
ASN
165
A
GLN
166
n
37
GLN
166
A
LEU
167
n
38
LEU
167
A
PHE
168
n
39
PHE
168
A
THR
169
n
40
THR
169
A
ASP
170
n
41
ASP
170
A
ALA
171
n
42
ALA
171
A
LEU
172
n
43
LEU
172
A
ASP
173
n
44
ASP
173
A
ILE
174
n
45
ILE
174
A
LEU
175
n
46
LEU
175
A
ALA
176
n
47
ALA
176
A
GLU
177
n
48
GLU
177
A
ASN
178
n
49
ASN
178
A
ASP
179
n
50
ASP
179
A
GLU
180
n
51
GLU
180
A
LEU
181
n
52
LEU
181
A
ARG
182
n
53
ARG
182
A
GLU
183
n
54
GLU
183
A
ASN
184
n
55
ASN
184
A
GLU
185
n
56
GLU
185
A
GLY
186
n
57
GLY
186
A
SER
187
n
58
SER
187
A
CYS
188
n
59
CYS
188
A
LEU
189
n
60
LEU
189
A
ALA
190
n
61
ALA
190
A
PHE
191
n
62
PHE
191
A
MET
192
n
63
MET
192
A
ARG
193
n
64
ARG
193
A
ALA
194
n
65
ALA
194
A
SER
195
n
66
SER
195
A
SER
196
n
67
SER
196
A
VAL
197
n
68
VAL
197
A
LEU
198
n
69
LEU
198
A
LYS
199
n
70
LYS
199
A
SER
200
n
71
SER
200
A
LEU
201
n
72
LEU
201
A
PRO
202
n
73
PRO
202
A
PHE
203
n
74
PHE
203
A
PRO
204
n
75
PRO
204
A
ILE
205
n
76
ILE
205
A
THR
206
n
77
THR
206
A
SER
207
n
78
SER
207
A
MET
208
n
79
MET
208
A
LYS
209
n
80
LYS
209
A
ASP
210
n
81
ASP
210
A
THR
211
n
82
THR
211
A
GLU
212
n
83
GLU
212
A
GLY
213
n
84
GLY
213
A
ILE
214
n
85
ILE
214
A
PRO
215
n
86
PRO
215
A
CYS
216
n
87
CYS
216
A
LEU
217
n
88
LEU
217
A
GLY
218
n
89
GLY
218
A
ASP
219
n
90
ASP
219
A
LYS
220
n
91
LYS
220
A
VAL
221
n
92
VAL
221
A
LYS
222
n
93
LYS
222
A
SER
223
n
94
SER
223
A
ILE
224
n
95
ILE
224
A
ILE
225
n
96
ILE
225
A
GLU
226
n
97
GLU
226
A
GLY
227
n
98
GLY
227
A
ILE
228
n
99
ILE
228
A
ILE
229
n
100
ILE
229
A
GLU
230
n
101
GLU
230
A
ASP
231
n
102
ASP
231
A
GLY
232
n
103
GLY
232
A
GLU
233
n
104
GLU
233
A
SER
234
n
105
SER
234
A
SER
235
n
106
SER
235
A
GLU
236
n
107
GLU
236
A
ALA
237
n
108
ALA
237
A
LYS
238
n
109
LYS
238
A
ALA
239
n
110
ALA
239
A
VAL
240
n
111
VAL
240
A
LEU
241
n
112
LEU
241
A
ASN
242
n
113
ASN
242
A
ASP
243
n
114
ASP
243
A
GLU
244
n
115
GLU
244
A
ARG
245
n
116
ARG
245
A
TYR
246
n
117
TYR
246
A
LYS
247
n
118
LYS
247
A
SER
248
n
119
SER
248
A
PHE
249
n
120
PHE
249
A
LYS
250
n
121
LYS
250
A
LEU
251
n
122
LEU
251
A
PHE
252
n
123
PHE
252
A
THR
253
n
124
THR
253
A
SER
254
n
125
SER
254
A
VAL
255
n
126
VAL
255
A
PHE
256
n
127
PHE
256
A
GLY
257
n
128
GLY
257
A
VAL
258
n
129
VAL
258
A
GLY
259
n
130
GLY
259
A
LEU
260
n
131
LEU
260
A
LYS
261
n
132
LYS
261
A
THR
262
n
133
THR
262
A
ALA
263
n
134
ALA
263
A
GLU
264
n
135
GLU
264
A
LYS
265
n
136
LYS
265
A
TRP
266
n
137
TRP
266
A
PHE
267
n
138
PHE
267
A
ARG
268
n
139
ARG
268
A
MET
269
n
140
MET
269
A
GLY
270
n
141
GLY
270
A
PHE
271
n
142
PHE
271
A
ARG
272
n
143
ARG
272
A
THR
273
n
144
THR
273
A
LEU
274
n
145
LEU
274
A
SER
275
n
146
SER
275
A
LYS
276
n
147
LYS
276
A
ILE
277
n
148
ILE
277
A
GLN
278
n
149
GLN
278
A
SER
279
n
150
SER
279
A
ASP
280
n
151
ASP
280
A
LYS
281
n
152
LYS
281
A
SER
282
n
153
SER
282
A
LEU
283
n
154
LEU
283
A
ARG
284
n
155
ARG
284
A
PHE
285
n
156
PHE
285
A
THR
286
n
157
THR
286
A
GLN
287
n
158
GLN
287
A
MET
288
n
159
MET
288
A
GLN
289
n
160
GLN
289
A
LYS
290
n
161
LYS
290
A
ALA
291
n
162
ALA
291
A
GLY
292
n
163
GLY
292
A
PHE
293
n
164
PHE
293
A
LEU
294
n
165
LEU
294
A
TYR
295
n
166
TYR
295
A
TYR
296
n
167
TYR
296
A
GLU
297
n
168
GLU
297
A
ASP
298
n
169
ASP
298
A
LEU
299
n
170
LEU
299
A
VAL
300
n
171
VAL
300
A
SER
301
n
172
SER
301
A
CYS
302
n
173
CYS
302
A
VAL
303
n
174
VAL
303
A
ASN
304
n
175
ASN
304
A
ARG
305
n
176
ARG
305
A
PRO
306
n
177
PRO
306
A
GLU
307
n
178
GLU
307
A
ALA
308
n
179
ALA
308
A
GLU
309
n
180
GLU
309
A
ALA
310
n
181
ALA
310
A
VAL
311
n
182
VAL
311
A
SER
312
n
183
SER
312
A
MET
313
n
184
MET
313
A
LEU
314
n
185
LEU
314
A
VAL
315
n
186
VAL
315
A
LYS
316
n
187
LYS
316
A
GLU
317
n
188
GLU
317
A
ALA
318
n
189
ALA
318
A
VAL
319
n
190
VAL
319
A
VAL
320
n
191
VAL
320
A
THR
321
n
192
THR
321
A
PHE
322
n
193
PHE
322
A
LEU
323
n
194
LEU
323
A
PRO
324
n
195
PRO
324
A
ASP
325
n
196
ASP
325
A
ALA
326
n
197
ALA
326
A
LEU
327
n
198
LEU
327
A
VAL
328
n
199
VAL
328
A
THR
329
n
200
THR
329
A
MET
330
n
201
MET
330
A
THR
331
n
202
THR
331
A
GLY
332
n
203
GLY
332
A
GLY
333
n
204
GLY
333
A
PHE
334
n
205
PHE
334
A
ARG
335
n
206
ARG
335
A
ARG
336
n
207
ARG
336
A
GLY
337
n
208
GLY
337
A
LYS
338
n
209
LYS
338
A
MET
339
n
210
MET
339
A
THR
340
n
211
THR
340
A
GLY
341
n
212
GLY
341
A
HIS
342
n
213
HIS
342
A
ASP
343
n
214
ASP
343
A
VAL
344
n
215
VAL
344
A
ASP
345
n
216
ASP
345
A
PHE
346
n
217
PHE
346
A
LEU
347
n
218
LEU
347
A
ILE
348
n
219
ILE
348
A
THR
349
n
220
THR
349
A
SER
350
n
221
SER
350
A
PRO
351
n
222
PRO
351
A
GLU
352
n
223
GLU
352
A
ALA
353
n
224
ALA
353
A
THR
354
n
225
THR
354
A
GLU
355
n
226
GLU
355
A
ASP
356
n
227
ASP
356
A
GLU
357
n
228
GLU
357
A
GLU
358
n
229
GLU
358
A
GLN
359
n
230
GLN
359
A
GLN
360
n
231
GLN
360
A
LEU
361
n
232
LEU
361
A
LEU
362
n
233
LEU
362
A
HIS
363
n
234
HIS
363
A
LYS
364
n
235
LYS
364
A
VAL
365
n
236
VAL
365
A
THR
366
n
237
THR
366
A
ASP
367
n
238
ASP
367
A
PHE
368
n
239
PHE
368
A
TRP
369
n
240
TRP
369
A
LYS
370
n
241
LYS
370
A
GLN
371
n
242
GLN
371
A
GLN
372
n
243
GLN
372
A
GLY
373
n
244
GLY
373
A
LEU
374
n
245
LEU
374
A
LEU
375
n
246
LEU
375
A
LEU
376
n
247
LEU
376
A
TYR
377
n
248
TYR
377
A
CYS
378
n
249
CYS
378
A
ASP
379
n
250
ASP
379
A
ILE
380
n
251
ILE
380
A
LEU
381
n
252
LEU
381
A
GLU
382
n
253
GLU
382
A
SER
383
n
254
SER
383
A
THR
384
n
255
THR
384
A
PHE
385
n
256
PHE
385
A
GLU
386
n
257
GLU
386
A
LYS
387
n
258
LYS
387
A
PHE
388
n
259
PHE
388
A
LYS
389
n
260
LYS
389
A
GLN
390
n
261
GLN
390
A
PRO
391
n
262
PRO
391
A
SER
392
n
263
SER
392
A
ARG
393
n
264
ARG
393
A
LYS
394
n
265
LYS
394
A
VAL
395
n
266
VAL
395
A
ASP
396
n
267
ASP
396
A
ALA
397
n
268
ALA
397
A
ALA
398
n
269
LEU
398
A
ASP
399
n
270
ASP
399
A
HIS
400
n
271
HIS
400
A
PHE
401
n
272
PHE
401
A
GLN
402
n
273
GLN
402
A
LYS
403
n
274
LYS
403
A
CYS
404
n
275
CYS
404
A
PHE
405
n
276
PHE
405
A
LEU
406
n
277
LEU
406
A
ILE
407
n
278
ILE
407
A
LEU
408
n
279
LEU
408
A
LYS
409
n
280
LYS
409
A
LEU
410
n
281
LEU
410
A
ASP
411
n
282
ASP
411
A
HIS
412
n
283
HIS
412
A
GLY
413
n
284
GLY
413
A
ARG
414
n
285
ARG
414
A
VAL
415
n
286
VAL
415
A
HIS
416
n
287
HIS
416
A
SER
417
n
288
SER
417
A
GLU
418
n
289
GLU
418
A
LYS
419
n
290
LYS
419
A
n
291
420
A
n
292
421
A
n
293
422
A
n
294
423
A
GLU
424
n
295
GLU
424
A
GLY
425
n
296
GLY
425
A
LYS
426
n
297
LYS
426
A
GLY
427
n
298
GLY
427
A
TRP
428
n
299
TRP
428
A
LYS
429
n
300
LYS
429
A
ALA
430
n
301
ALA
430
A
ILE
431
n
302
ILE
431
A
ARG
432
n
303
ARG
432
A
VAL
433
n
304
VAL
433
A
ASP
434
n
305
ASP
434
A
LEU
435
n
306
LEU
435
A
VAL
436
n
307
VAL
436
A
MET
437
n
308
MET
437
A
CYS
438
n
309
CYS
438
A
PRO
439
n
310
PRO
439
A
TYR
440
n
311
TYR
440
A
ASP
441
n
312
ASP
441
A
ARG
442
n
313
ARG
442
A
ARG
443
n
314
ARG
443
A
ALA
444
n
315
ALA
444
A
PHE
445
n
316
PHE
445
A
ALA
446
n
317
ALA
446
A
LEU
447
n
318
LEU
447
A
LEU
448
n
319
LEU
448
A
GLY
449
n
320
GLY
449
A
TRP
450
n
321
TRP
450
A
THR
451
n
322
THR
451
A
GLY
452
n
323
GLY
452
A
SER
453
n
324
SER
453
A
ARG
454
n
325
ARG
454
A
GLN
455
n
326
GLN
455
A
PHE
456
n
327
PHE
456
A
GLU
457
n
328
GLU
457
A
ARG
458
n
329
ARG
458
A
ASP
459
n
330
ASP
459
A
LEU
460
n
331
LEU
460
A
ARG
461
n
332
ARG
461
A
ARG
462
n
333
ARG
462
A
TYR
463
n
334
TYR
463
A
ALA
464
n
335
ALA
464
A
THR
465
n
336
THR
465
A
HIS
466
n
337
HIS
466
A
GLU
467
n
338
GLU
467
A
ARG
468
n
339
ARG
468
A
LYS
469
n
340
LYS
469
A
MET
470
n
341
MET
470
A
MET
471
n
342
MET
471
A
LEU
472
n
343
LEU
472
A
ASP
473
n
344
ASP
473
A
ASN
474
n
345
ASN
474
A
HIS
475
n
346
HIS
475
A
ALA
476
n
347
ALA
476
A
LEU
477
n
348
LEU
477
A
TYR
478
n
349
TYR
478
A
ASP
479
n
350
ASP
479
A
ARG
480
n
351
ARG
480
A
THR
481
n
352
THR
481
A
LYS
482
n
353
LYS
482
A
ARG
483
n
354
ARG
483
A
VAL
484
n
355
VAL
484
A
PHE
485
n
356
PHE
485
A
LEU
486
n
357
LEU
486
A
GLU
487
n
358
GLU
487
A
ALA
488
n
359
ALA
488
A
GLU
489
n
360
GLU
489
A
SER
490
n
361
SER
490
A
GLU
491
n
362
GLU
491
A
GLU
492
n
363
GLU
492
A
GLU
493
n
364
GLU
493
A
ILE
494
n
365
ILE
494
A
PHE
495
n
366
PHE
495
A
ALA
496
n
367
ALA
496
A
HIS
497
n
368
HIS
497
A
LEU
498
n
369
LEU
498
A
GLY
499
n
370
GLY
499
A
LEU
500
n
371
LEU
500
A
ASP
501
n
372
ASP
501
A
TYR
502
n
373
TYR
502
A
ILE
503
n
374
ILE
503
A
GLU
504
n
375
GLU
504
A
PRO
505
n
376
PRO
505
A
TRP
506
n
377
TRP
506
A
GLU
507
n
378
GLU
507
A
ARG
508
n
379
ARG
508
A
ASN
509
n
380
ASN
509
A
ALA
510
n
381
ALA
510
A
n
382
511
A
n
383
512
A
n
384
513
A
n
385
514
A
n
386
515
A
n
387
516
A
n
388
517
A
n
389
518
A
n
390
519
A
n
391
520
A
n
392
521
A
n
393
522
A
n
394
523
A
n
395
524
A
n
396
525
A
n
397
526
A
n
398
527
A
n
399
528
A
n
400
529
A
4.0050
0.5478
-0.5877
3.7105
0.5196
2.2672
-0.0146
0.3496
0.2661
-0.2864
-0.0419
0.0803
-0.3180
0.0026
0.0565
-0.1522
0.0005
0.0032
-0.0262
0.0148
-0.0272
refined
27.6425
11.8333
5.5357
X-RAY DIFFRACTION
0.7932
0.0980
0.0923
1.6934
0.6048
0.5073
-0.0083
-0.1131
0.0351
0.1434
-0.0344
0.1448
0.0196
-0.1367
0.0427
-0.1341
-0.0099
0.0389
-0.0862
-0.0148
0.0572
refined
11.9018
11.2086
29.8235
X-RAY DIFFRACTION
5.7337
-0.1726
0.7731
0.0000
-0.1500
0.8412
0.0526
0.3355
-0.3317
0.0581
-0.1256
0.2383
-0.0301
0.0638
0.0730
-0.1534
0.0116
-0.0166
-0.0453
-0.0976
0.1463
refined
7.2292
-1.3423
8.6159
X-RAY DIFFRACTION
A
149
A
239
X-RAY DIFFRACTION
1
{A|149 - 239}
A
240
A
453
X-RAY DIFFRACTION
2
{A|240 - 453}
A
454
A
510
X-RAY DIFFRACTION
3
{A|454 - 510}
author_and_software_defined_assembly
PISA
1
monomeric
A
THR
253
A
O
THR
124
1_555
A
NA
601
B
NA
NA
1_555
A
VAL
255
A
O
VAL
126
1_555
80.4
A
THR
253
A
O
THR
124
1_555
A
NA
601
B
NA
NA
1_555
A
VAL
258
A
O
VAL
129
1_555
96.5
A
VAL
255
A
O
VAL
126
1_555
A
NA
601
B
NA
NA
1_555
A
VAL
258
A
O
VAL
129
1_555
88.0
A
THR
253
A
O
THR
124
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
781
D
O
HOH
1_555
167.2
A
VAL
255
A
O
VAL
126
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
781
D
O
HOH
1_555
93.1
A
VAL
258
A
O
VAL
129
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
781
D
O
HOH
1_555
94.3
A
THR
253
A
O
THR
124
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
921
D
O
HOH
1_555
75.8
A
VAL
255
A
O
VAL
126
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
921
D
O
HOH
1_555
91.7
A
VAL
258
A
O
VAL
129
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
921
D
O
HOH
1_555
172.2
A
HOH
781
D
O
HOH
1_555
A
NA
601
B
NA
NA
1_555
A
HOH
921
D
O
HOH
1_555
93.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
303
A
N
VAL
174
A
O
GLY
341
A
O
GLY
212
A
N
LEU
327
A
N
LEU
198
A
O
THR
349
A
O
THR
220
A
N
ILE
348
A
N
ILE
219
A
O
VAL
436
A
O
VAL
307
A
O
VAL
433
A
O
VAL
304
A
N
LEU
406
A
N
LEU
277
A
O
LYS
403
A
O
LYS
274
A
N
LEU
381
A
N
LEU
252
A
N
MET
471
A
N
MET
342
A
O
TYR
478
A
O
TYR
349
A
N
ASP
479
A
N
ASP
350
A
O
VAL
484
A
O
VAL
355
1
A
CG
LYS
149
A
CG
LYS
20
1
Y
1
A
CD
LYS
149
A
CD
LYS
20
1
Y
1
A
CE
LYS
149
A
CE
LYS
20
1
Y
1
A
NZ
LYS
149
A
NZ
LYS
20
1
Y
1
A
CG
LYS
209
A
CG
LYS
80
1
Y
1
A
CD
LYS
209
A
CD
LYS
80
1
Y
1
A
CE
LYS
209
A
CE
LYS
80
1
Y
1
A
NZ
LYS
209
A
NZ
LYS
80
1
Y
1
A
CG
LEU
398
A
CG
LEU
269
1
Y
1
A
CD1
LEU
398
A
CD1
LEU
269
1
Y
1
A
CD2
LEU
398
A
CD2
LEU
269
1
Y
1
A
CG
GLU
424
A
CG
GLU
295
1
Y
1
A
CD
GLU
424
A
CD
GLU
295
1
Y
1
A
OE1
GLU
424
A
OE1
GLU
295
1
Y
1
A
OE2
GLU
424
A
OE2
GLU
295
1
Y
1
A
HIS
130
A
HIS
1
1
Y
1
A
MET
131
A
MET
2
1
Y
1
A
SER
132
A
SER
3
1
Y
1
A
PRO
133
A
PRO
4
1
Y
1
A
SER
134
A
SER
5
1
Y
1
A
PRO
135
A
PRO
6
1
Y
1
A
VAL
136
A
VAL
7
1
Y
1
A
PRO
137
A
PRO
8
1
Y
1
A
GLY
138
A
GLY
9
1
Y
1
A
SER
139
A
SER
10
1
Y
1
A
GLN
140
A
GLN
11
1
Y
1
A
ASN
141
A
ASN
12
1
Y
1
A
VAL
142
A
VAL
13
1
Y
1
A
PRO
143
A
PRO
14
1
Y
1
A
ALA
144
A
ALA
15
1
Y
1
A
PRO
145
A
PRO
16
1
Y
1
A
ALA
146
A
ALA
17
1
Y
1
A
VAL
147
A
VAL
18
1
Y
1
A
LYS
148
A
LYS
19
1
Y
1
A
SER
420
A
SER
291
1
Y
1
A
GLY
421
A
GLY
292
1
Y
1
A
GLN
422
A
GLN
293
1
Y
1
A
GLN
423
A
GLN
294
1
Y
1
A
MET
511
A
MET
382
1
Y
1
A
GLY
512
A
GLY
383
1
Y
1
A
SER
513
A
SER
384
1
Y
1
A
SER
514
A
SER
385
1
Y
1
A
HIS
515
A
HIS
386
1
Y
1
A
HIS
516
A
HIS
387
1
Y
1
A
HIS
517
A
HIS
388
1
Y
1
A
HIS
518
A
HIS
389
1
Y
1
A
HIS
519
A
HIS
390
1
Y
1
A
HIS
520
A
HIS
391
1
Y
1
A
SER
521
A
SER
392
1
Y
1
A
SER
522
A
SER
393
1
Y
1
A
GLY
523
A
GLY
394
1
Y
1
A
LEU
524
A
LEU
395
1
Y
1
A
VAL
525
A
VAL
396
1
Y
1
A
PRO
526
A
PRO
397
1
Y
1
A
ARG
527
A
ARG
398
1
Y
1
A
GLY
528
A
GLY
399
1
Y
1
A
SER
529
A
SER
400
1
Y
1
A
A
O
NH1
LYS
ARG
394
461
2.05
1
A
THR
331
-113.51
-152.90
1
A
ASN
509
-83.04
44.87
43.43
6.4643
0.0000
0.0000
3.9109
0.0000
-10.3752
0.9260
0.9141
0.2249
0.1852
0.1872
2.40
39.76
950
18520
5.13
99.88
0.328
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.3890
0.2300
0.2220
PDB ENTRY 1JMS
Engh & Huber
0.270
2.40
39.76
270
3185
25
0
2890
0.010
2973
HARMONIC
2.00
0.97
4001
HARMONIC
2.00
1406
SINUSOIDAL
2.00
85
HARMONIC
2.00
440
HARMONIC
5.00
2973
HARMONIC
20.00
0
SEMIHARMONIC
5.00
2.95
2.95
373
SEMIHARMONIC
5.00
3406
SEMIHARMONIC
4.00
0.2890
0.2068
0.2107
2.54
146
2813
2959
9
4.93
99.88
45.84
2.4
40
4IQU
18550
18521
0.115
1
10.5
3.8
99.9
0.656
2.40
2.53
2.0
1
3.8
100
data collection
DNA
phasing
PHASER
refinement
BUSTER
2.11.2
data reduction
XDS
data scaling
SCALA
Tdt core in complex with inhibitor (2Z,5E)-6-[4-(4-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid
1
N
N
2
N
N
3
N
N
4
N
N
A
TYR
153
A
TYR
24
HELX_P
A
ARG
157
A
ARG
28
5
1
5
A
ASN
165
A
ASN
36
HELX_P
A
ARG
182
A
ARG
53
1
2
18
A
ASN
184
A
ASN
55
HELX_P
A
SER
200
A
SER
71
1
3
17
A
SER
207
A
SER
78
HELX_P
A
GLU
212
A
GLU
83
5
4
6
A
GLY
218
A
GLY
89
HELX_P
A
GLY
232
A
GLY
103
1
5
15
A
SER
234
A
SER
105
HELX_P
A
ASP
243
A
ASP
114
1
6
10
A
ASP
243
A
ASP
114
HELX_P
A
SER
254
A
SER
125
1
7
12
A
GLY
259
A
GLY
130
HELX_P
A
MET
269
A
MET
140
1
8
11
A
THR
273
A
THR
144
HELX_P
A
ASP
280
A
ASP
151
1
9
8
A
THR
286
A
THR
157
HELX_P
A
TYR
295
A
TYR
166
1
10
10
A
TYR
295
A
TYR
166
HELX_P
A
SER
301
A
SER
172
1
11
7
A
ARG
305
A
ARG
176
HELX_P
A
LEU
323
A
LEU
194
1
12
19
A
THR
331
A
THR
202
HELX_P
A
ARG
336
A
ARG
207
1
13
6
A
THR
354
A
THR
225
HELX_P
A
GLN
372
A
GLN
243
1
14
19
A
GLY
413
A
GLY
284
HELX_P
A
VAL
415
A
VAL
286
5
15
3
A
PRO
439
A
PRO
310
HELX_P
A
ASP
441
A
ASP
312
5
16
3
A
ARG
442
A
ARG
313
HELX_P
A
GLY
452
A
GLY
323
1
17
11
A
SER
453
A
SER
324
HELX_P
A
LYS
469
A
LYS
340
1
18
17
A
SER
490
A
SER
361
HELX_P
A
GLY
499
A
GLY
370
1
19
10
A
GLU
504
A
GLU
375
HELX_P
A
ARG
508
A
ARG
379
5
20
5
metalc
2.393
A
THR
253
A
O
THR
124
1_555
A
NA
601
B
NA
NA
1_555
metalc
2.827
A
VAL
255
A
O
VAL
126
1_555
A
NA
601
B
NA
NA
1_555
metalc
2.705
A
VAL
258
A
O
VAL
129
1_555
A
NA
601
B
NA
NA
1_555
metalc
2.778
A
NA
601
B
NA
NA
1_555
A
HOH
781
D
O
HOH
1_555
metalc
2.923
A
NA
601
B
NA
NA
1_555
A
HOH
921
D
O
HOH
1_555
TRANSFERASE/TRANSFERASE INHIBITOR
terminal transferase, TRANSFERASE-TRANSFERASE INHIBITOR complex
A
GLY
452
A
GLY
323
1
A
SER
453
A
SER
324
-3.19
TDT_MOUSE
UNP
1
132
P09838
SPSPVPGSQNVPAPAVKKISQYACQRRTTLNNYNQLFTDALDILAENDELRENEGSCLAFMRASSVLKSLPFPITSMKDT
EGIPCLGDKVKSIIEGIIEDGESSEAKAVLNDERYKSFKLFTSVFGVGLKTAEKWFRMGFRTLSKIQSDKSLRFTQMQKA
GFLYYEDLVSCVNRPEAEAVSMLVKEAVVTFLPDALVTMTGGFRRGKMTGHDVDFLITSPEATEDEEQQLLHKVTDFWKQ
QGLLLYCDILESTFEKFKQPSRKVDALDHFQKCFLILKLDHGRVHSEKSGQQEGKGWKAIRVDLVMCPYDRRAFALLGWT
GSRQFERDLRRYATHERKMMLDNHALYDRTK
TDT_MOUSE
UNP
1
503
P09838
RVFLEAESEEEIFAHLGLDYIEPWERNA
132
482
4IQU
132
482
P09838
A
1
3
353
503
530
4IQU
483
510
P09838
A
2
354
381
1
expression tag
HIS
130
4IQU
A
P09838
UNP
1
1
expression tag
MET
131
4IQU
A
P09838
UNP
2
2
expression tag
MET
511
4IQU
A
P09838
UNP
382
2
expression tag
GLY
512
4IQU
A
P09838
UNP
383
2
expression tag
SER
513
4IQU
A
P09838
UNP
384
2
expression tag
SER
514
4IQU
A
P09838
UNP
385
2
expression tag
HIS
515
4IQU
A
P09838
UNP
386
2
expression tag
HIS
516
4IQU
A
P09838
UNP
387
2
expression tag
HIS
517
4IQU
A
P09838
UNP
388
2
expression tag
HIS
518
4IQU
A
P09838
UNP
389
2
expression tag
HIS
519
4IQU
A
P09838
UNP
390
2
expression tag
HIS
520
4IQU
A
P09838
UNP
391
2
expression tag
SER
521
4IQU
A
P09838
UNP
392
2
expression tag
SER
522
4IQU
A
P09838
UNP
393
2
expression tag
GLY
523
4IQU
A
P09838
UNP
394
2
expression tag
LEU
524
4IQU
A
P09838
UNP
395
2
expression tag
VAL
525
4IQU
A
P09838
UNP
396
2
expression tag
PRO
526
4IQU
A
P09838
UNP
397
2
expression tag
ARG
527
4IQU
A
P09838
UNP
398
2
expression tag
GLY
528
4IQU
A
P09838
UNP
399
2
expression tag
SER
529
4IQU
A
P09838
UNP
400
2
5
3
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
303
A
VAL
174
A
ASN
304
A
ASN
175
A
THR
340
A
THR
211
A
GLY
341
A
GLY
212
A
LEU
327
A
LEU
198
A
MET
330
A
MET
201
A
VAL
344
A
VAL
215
A
THR
349
A
THR
220
A
TRP
428
A
TRP
299
A
MET
437
A
MET
308
A
GLN
402
A
GLN
273
A
ASP
411
A
ASP
282
A
LEU
375
A
LEU
246
A
LEU
381
A
LEU
252
A
MET
470
A
MET
341
A
LEU
472
A
LEU
343
A
LEU
477
A
LEU
348
A
ASP
479
A
ASP
350
A
VAL
484
A
VAL
355
A
PHE
485
A
PHE
356
BINDING SITE FOR RESIDUE NA A 601
A
NA
601
Software
5
BINDING SITE FOR RESIDUE 1FQ A 602
A
1FQ
602
Software
12
A
THR
253
A
THR
124
5
1_555
A
VAL
255
A
VAL
126
5
1_555
A
VAL
258
A
VAL
129
5
1_555
A
HOH
781
D
HOH
5
1_555
A
HOH
921
D
HOH
5
1_555
A
GLY
332
A
GLY
203
12
1_555
A
ARG
336
A
ARG
207
12
1_555
A
ASP
399
A
ASP
270
12
1_555
A
TRP
450
A
TRP
321
12
1_555
A
SER
453
A
SER
324
12
1_555
A
ARG
454
A
ARG
325
12
1_555
A
GLN
455
A
GLN
326
12
1_555
A
ASN
474
A
ASN
345
12
1_555
A
ALA
510
A
ALA
381
12
1_555
A
HOH
733
D
HOH
12
1_555
A
HOH
739
D
HOH
12
1_555
A
HOH
890
D
HOH
12
1_555
19
P 21 21 21