0.032407
0.000000
0.004518
-0.000000
0.016817
0.000000
0.000000
-0.000000
0.029298
0.000000
0.000000
0.000000
Bell-Upp, P.C.
Schlessman, J.L.
Garcia-Moreno E., B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
97.940
90.000
30.858
59.465
34.462
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C10 H16 N2 O11 P2
402.188
THYMIDINE-3',5'-DIPHOSPHATE
DNA linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
S
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
N
N
125
S
C
N
126
N
C
N
127
N
O
N
128
N
C
Y
129
N
C
Y
130
N
N
Y
131
N
C
Y
132
N
C
Y
133
N
N
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
N
N
149
S
C
N
150
N
C
N
151
N
O
N
152
S
C
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
S
N
224
N
C
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
S
C
N
243
N
O
N
244
N
C
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
Y
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
N
270
N
O
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
P
N
283
N
O
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
P
N
319
N
O
N
320
N
O
N
321
N
O
N
322
N
P
N
323
N
O
N
324
N
O
N
325
N
O
N
326
N
O
N
327
N
C
N
328
R
C
N
329
N
O
N
330
S
C
N
331
N
O
N
332
N
C
N
333
R
C
N
334
N
N
N
335
N
C
N
336
N
O
N
337
N
N
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
Y
256
N
doub
Y
257
N
sing
Y
258
N
sing
N
259
N
sing
Y
260
N
doub
N
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
To be Published
0353
Crystal structure of Staphylococcal nuclease variant Delta+PHS R126E at cryogenic temperature
10.2210/pdb4iun/pdb
pdb_00004iun
100
1
multi-layer optics
CCD
2012-12-04
APEX II CCD
Ge(111)
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
SEALED TUBE
OTHER
16115.383
Thermonuclease
3.1.31.1
Nuclease A (UNP residues 83-231)
G50F/V51N/P117G/H124L/R126E/S128A/Del44-49
1
man
polymer
40.078
CALCIUM ION
1
syn
non-polymer
402.188
THYMIDINE-3',5'-DIPHOSPHATE
1
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
1
syn
non-polymer
18.015
water
138
nat
water
TNase, Micrococcal nuclease, Staphylococcal nuclease
no
no
ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG
RGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLEKAEAQAKKEKLNIWSEDNADSGQ
ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYG
RGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLEKAEAQAKKEKLNIWSEDNADSGQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1280
Staphylococcus aureus
469008
Escherichia coli
BL21(DE3)
plasmid
pET24a+
1
1.94
36.70
VAPOR DIFFUSION, HANGING DROP
7
40% MPD, 25 mM potassium phosphate, calcium chloride, pdTp, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
diffrn_source
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-02-06
1
1
2018-04-04
1
2
2023-09-20
_diffrn_source.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-01-21
REL
REL
CA
CALCIUM ION
THP
THYMIDINE-3',5'-DIPHOSPHATE
PO4
PHOSPHATE ION
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
HOH
water
3BDC
PDB ENTRY 3BDC
PDB
experimental model
CA
1
2
CA
CA
201
A
THP
1
3
THP
THP
202
A
PO4
1
4
PO4
PO4
203
A
MPD
1
5
MPD
MPD
204
A
HOH
1
6
HOH
HOH
301
A
HOH
2
6
HOH
HOH
302
A
HOH
3
6
HOH
HOH
303
A
HOH
4
6
HOH
HOH
304
A
HOH
5
6
HOH
HOH
305
A
HOH
6
6
HOH
HOH
306
A
HOH
7
6
HOH
HOH
307
A
HOH
8
6
HOH
HOH
308
A
HOH
9
6
HOH
HOH
309
A
HOH
10
6
HOH
HOH
310
A
HOH
11
6
HOH
HOH
311
A
HOH
12
6
HOH
HOH
312
A
HOH
13
6
HOH
HOH
313
A
HOH
14
6
HOH
HOH
314
A
HOH
15
6
HOH
HOH
315
A
HOH
16
6
HOH
HOH
316
A
HOH
17
6
HOH
HOH
317
A
HOH
18
6
HOH
HOH
318
A
HOH
19
6
HOH
HOH
319
A
HOH
20
6
HOH
HOH
320
A
HOH
21
6
HOH
HOH
321
A
HOH
22
6
HOH
HOH
322
A
HOH
23
6
HOH
HOH
323
A
HOH
24
6
HOH
HOH
324
A
HOH
26
6
HOH
HOH
325
A
HOH
27
6
HOH
HOH
326
A
HOH
30
6
HOH
HOH
327
A
HOH
31
6
HOH
HOH
328
A
HOH
32
6
HOH
HOH
329
A
HOH
33
6
HOH
HOH
330
A
HOH
34
6
HOH
HOH
331
A
HOH
35
6
HOH
HOH
332
A
HOH
36
6
HOH
HOH
333
A
HOH
37
6
HOH
HOH
334
A
HOH
38
6
HOH
HOH
335
A
HOH
39
6
HOH
HOH
336
A
HOH
41
6
HOH
HOH
337
A
HOH
42
6
HOH
HOH
338
A
HOH
43
6
HOH
HOH
339
A
HOH
44
6
HOH
HOH
340
A
HOH
45
6
HOH
HOH
341
A
HOH
46
6
HOH
HOH
342
A
HOH
47
6
HOH
HOH
343
A
HOH
48
6
HOH
HOH
344
A
HOH
49
6
HOH
HOH
345
A
HOH
52
6
HOH
HOH
346
A
HOH
54
6
HOH
HOH
347
A
HOH
55
6
HOH
HOH
348
A
HOH
56
6
HOH
HOH
349
A
HOH
57
6
HOH
HOH
350
A
HOH
58
6
HOH
HOH
351
A
HOH
60
6
HOH
HOH
352
A
HOH
62
6
HOH
HOH
353
A
HOH
67
6
HOH
HOH
354
A
HOH
68
6
HOH
HOH
355
A
HOH
69
6
HOH
HOH
356
A
HOH
70
6
HOH
HOH
357
A
HOH
71
6
HOH
HOH
358
A
HOH
72
6
HOH
HOH
359
A
HOH
73
6
HOH
HOH
360
A
HOH
77
6
HOH
HOH
361
A
HOH
78
6
HOH
HOH
362
A
HOH
79
6
HOH
HOH
363
A
HOH
80
6
HOH
HOH
364
A
HOH
81
6
HOH
HOH
365
A
HOH
85
6
HOH
HOH
366
A
HOH
87
6
HOH
HOH
367
A
HOH
90
6
HOH
HOH
368
A
HOH
91
6
HOH
HOH
369
A
HOH
98
6
HOH
HOH
370
A
HOH
99
6
HOH
HOH
371
A
HOH
101
6
HOH
HOH
372
A
HOH
103
6
HOH
HOH
373
A
HOH
104
6
HOH
HOH
374
A
HOH
105
6
HOH
HOH
375
A
HOH
106
6
HOH
HOH
376
A
HOH
107
6
HOH
HOH
377
A
HOH
108
6
HOH
HOH
378
A
HOH
109
6
HOH
HOH
379
A
HOH
110
6
HOH
HOH
380
A
HOH
111
6
HOH
HOH
381
A
HOH
112
6
HOH
HOH
382
A
HOH
113
6
HOH
HOH
383
A
HOH
116
6
HOH
HOH
384
A
HOH
117
6
HOH
HOH
385
A
HOH
119
6
HOH
HOH
386
A
HOH
124
6
HOH
HOH
387
A
HOH
125
6
HOH
HOH
388
A
HOH
129
6
HOH
HOH
389
A
HOH
131
6
HOH
HOH
390
A
HOH
132
6
HOH
HOH
391
A
HOH
133
6
HOH
HOH
392
A
HOH
134
6
HOH
HOH
393
A
HOH
135
6
HOH
HOH
394
A
HOH
136
6
HOH
HOH
395
A
HOH
137
6
HOH
HOH
396
A
HOH
138
6
HOH
HOH
397
A
HOH
142
6
HOH
HOH
398
A
HOH
143
6
HOH
HOH
399
A
HOH
144
6
HOH
HOH
400
A
HOH
148
6
HOH
HOH
401
A
HOH
152
6
HOH
HOH
402
A
HOH
153
6
HOH
HOH
403
A
HOH
174
6
HOH
HOH
404
A
HOH
175
6
HOH
HOH
405
A
HOH
177
6
HOH
HOH
406
A
HOH
178
6
HOH
HOH
407
A
HOH
179
6
HOH
HOH
408
A
HOH
180
6
HOH
HOH
409
A
HOH
181
6
HOH
HOH
410
A
HOH
182
6
HOH
HOH
411
A
HOH
184
6
HOH
HOH
412
A
HOH
185
6
HOH
HOH
413
A
HOH
186
6
HOH
HOH
414
A
HOH
187
6
HOH
HOH
415
A
HOH
188
6
HOH
HOH
416
A
HOH
189
6
HOH
HOH
417
A
HOH
192
6
HOH
HOH
418
A
HOH
195
6
HOH
HOH
419
A
HOH
200
6
HOH
HOH
420
A
HOH
201
6
HOH
HOH
421
A
HOH
204
6
HOH
HOH
422
A
HOH
205
6
HOH
HOH
423
A
HOH
206
6
HOH
HOH
424
A
HOH
216
6
HOH
HOH
425
A
HOH
224
6
HOH
HOH
426
A
HOH
225
6
HOH
HOH
427
A
HOH
227
6
HOH
HOH
428
A
HOH
228
6
HOH
HOH
429
A
HOH
229
6
HOH
HOH
430
A
HOH
230
6
HOH
HOH
431
A
HOH
232
6
HOH
HOH
432
A
HOH
241
6
HOH
HOH
433
A
HOH
243
6
HOH
HOH
434
A
HOH
244
6
HOH
HOH
435
A
HOH
245
6
HOH
HOH
436
A
HOH
275
6
HOH
HOH
437
A
HOH
276
6
HOH
HOH
438
A
2.500
2.500
34.130
34.130
Phaser MODE: MR_AUTO
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
SER
3
n
3
SER
3
A
THR
4
n
4
THR
4
A
LYS
5
n
5
LYS
5
A
LYS
6
n
6
LYS
6
A
LEU
7
n
7
LEU
7
A
HIS
8
n
8
HIS
8
A
LYS
9
n
9
LYS
9
A
GLU
10
n
10
GLU
10
A
PRO
11
n
11
PRO
11
A
ALA
12
n
12
ALA
12
A
THR
13
n
13
THR
13
A
LEU
14
n
14
LEU
14
A
ILE
15
n
15
ILE
15
A
LYS
16
n
16
LYS
16
A
ALA
17
n
17
ALA
17
A
ILE
18
n
18
ILE
18
A
ASP
19
n
19
ASP
19
A
GLY
20
n
20
GLY
20
A
ASP
21
n
21
ASP
21
A
THR
22
n
22
THR
22
A
VAL
23
n
23
VAL
23
A
LYS
24
n
24
LYS
24
A
LEU
25
n
25
LEU
25
A
MET
26
n
26
MET
26
A
TYR
27
n
27
TYR
27
A
LYS
28
n
28
LYS
28
A
GLY
29
n
29
GLY
29
A
GLN
30
n
30
GLN
30
A
PRO
31
n
31
PRO
31
A
MET
32
n
32
MET
32
A
THR
33
n
33
THR
33
A
PHE
34
n
34
PHE
34
A
ARG
35
n
35
ARG
35
A
LEU
36
n
36
LEU
36
A
LEU
37
n
37
LEU
37
A
LEU
38
n
38
LEU
38
A
VAL
39
n
39
VAL
39
A
ASP
40
n
40
ASP
40
A
THR
41
n
41
THR
41
A
PRO
42
n
42
PRO
42
A
GLU
43
n
43
GLU
43
A
PHE
50
n
44
PHE
50
A
ASN
51
n
45
ASN
51
A
GLU
52
n
46
GLU
52
A
LYS
53
n
47
LYS
53
A
TYR
54
n
48
TYR
54
A
GLY
55
n
49
GLY
55
A
PRO
56
n
50
PRO
56
A
GLU
57
n
51
GLU
57
A
ALA
58
n
52
ALA
58
A
SER
59
n
53
SER
59
A
ALA
60
n
54
ALA
60
A
PHE
61
n
55
PHE
61
A
THR
62
n
56
THR
62
A
LYS
63
n
57
LYS
63
A
LYS
64
n
58
LYS
64
A
MET
65
n
59
MET
65
A
VAL
66
n
60
VAL
66
A
GLU
67
n
61
GLU
67
A
ASN
68
n
62
ASN
68
A
ALA
69
n
63
ALA
69
A
LYS
70
n
64
LYS
70
A
LYS
71
n
65
LYS
71
A
ILE
72
n
66
ILE
72
A
GLU
73
n
67
GLU
73
A
VAL
74
n
68
VAL
74
A
GLU
75
n
69
GLU
75
A
PHE
76
n
70
PHE
76
A
ASP
77
n
71
ASP
77
A
LYS
78
n
72
LYS
78
A
GLY
79
n
73
GLY
79
A
GLN
80
n
74
GLN
80
A
ARG
81
n
75
ARG
81
A
THR
82
n
76
THR
82
A
ASP
83
n
77
ASP
83
A
LYS
84
n
78
LYS
84
A
TYR
85
n
79
TYR
85
A
GLY
86
n
80
GLY
86
A
ARG
87
n
81
ARG
87
A
GLY
88
n
82
GLY
88
A
LEU
89
n
83
LEU
89
A
ALA
90
n
84
ALA
90
A
TYR
91
n
85
TYR
91
A
ILE
92
n
86
ILE
92
A
TYR
93
n
87
TYR
93
A
ALA
94
n
88
ALA
94
A
ASP
95
n
89
ASP
95
A
GLY
96
n
90
GLY
96
A
LYS
97
n
91
LYS
97
A
MET
98
n
92
MET
98
A
VAL
99
n
93
VAL
99
A
ASN
100
n
94
ASN
100
A
GLU
101
n
95
GLU
101
A
ALA
102
n
96
ALA
102
A
LEU
103
n
97
LEU
103
A
VAL
104
n
98
VAL
104
A
ARG
105
n
99
ARG
105
A
GLN
106
n
100
GLN
106
A
GLY
107
n
101
GLY
107
A
LEU
108
n
102
LEU
108
A
ALA
109
n
103
ALA
109
A
LYS
110
n
104
LYS
110
A
VAL
111
n
105
VAL
111
A
ALA
112
n
106
ALA
112
A
TYR
113
n
107
TYR
113
A
VAL
114
n
108
VAL
114
A
TYR
115
n
109
TYR
115
A
LYS
116
n
110
LYS
116
A
GLY
117
n
111
GLY
117
A
ASN
118
n
112
ASN
118
A
ASN
119
n
113
ASN
119
A
THR
120
n
114
THR
120
A
HIS
121
n
115
HIS
121
A
GLU
122
n
116
GLU
122
A
GLN
123
n
117
GLN
123
A
LEU
124
n
118
LEU
124
A
LEU
125
n
119
LEU
125
A
GLU
126
n
120
GLU
126
A
LYS
127
n
121
LYS
127
A
ALA
128
n
122
ALA
128
A
GLU
129
n
123
GLU
129
A
ALA
130
n
124
ALA
130
A
GLN
131
n
125
GLN
131
A
ALA
132
n
126
ALA
132
A
LYS
133
n
127
LYS
133
A
LYS
134
n
128
LYS
134
A
GLU
135
n
129
GLU
135
A
LYS
136
n
130
LYS
136
A
LEU
137
n
131
LEU
137
A
ASN
138
n
132
ASN
138
A
ILE
139
n
133
ILE
139
A
TRP
140
n
134
TRP
140
A
SER
141
n
135
SER
141
A
GLU
142
n
136
GLU
142
A
n
137
143
A
n
138
144
A
n
139
145
A
n
140
146
A
n
141
147
A
n
142
148
A
n
143
149
A
0.5244
-0.2426
0.9946
0.2020
-0.7919
3.2334
0.1742
0.0787
-0.0989
-0.0649
0.1132
0.1118
0.1622
-0.2378
-0.2874
0.1214
0.0029
-0.1158
0.1463
0.0790
0.1566
refined
1.7460
-1.4419
-11.7392
X-RAY DIFFRACTION
0.7777
-1.0713
-0.5991
4.1997
1.3521
1.0322
-0.0027
0.0136
-0.0325
-0.0164
0.0112
-0.1119
0.0728
0.0633
-0.0085
0.0333
0.0147
-0.0073
0.0579
-0.0042
0.0418
refined
15.6856
-4.4021
3.1710
X-RAY DIFFRACTION
0.7572
-0.2673
0.0331
1.5370
0.1359
2.6590
-0.0035
-0.0642
-0.0418
0.1219
0.0328
-0.0268
0.0708
0.0486
-0.0293
0.0348
0.0064
0.0071
0.0701
0.0059
0.0775
refined
9.7816
1.2656
9.9181
X-RAY DIFFRACTION
2.2518
0.2409
0.4129
2.1550
-0.2764
1.7907
0.0342
0.0577
0.0847
0.0097
-0.0211
-0.0070
-0.0660
0.0764
-0.0130
0.0394
0.0140
-0.0093
0.0272
-0.0134
0.0224
refined
11.8141
2.1432
-0.8738
X-RAY DIFFRACTION
1.4049
0.2304
-0.6047
1.0908
-0.1994
1.8985
0.0026
0.0337
0.0623
-0.0181
0.0107
0.0452
-0.0859
-0.0675
-0.0133
0.0263
0.0041
-0.0040
0.0242
-0.0033
0.0406
refined
4.2947
9.1047
4.0117
X-RAY DIFFRACTION
3.3159
0.0740
1.3433
1.6672
0.6322
7.3821
-0.0644
-0.1275
0.2050
0.0602
-0.0256
0.1385
-0.3144
-0.2157
0.0901
0.0449
0.0057
0.0099
0.0276
0.0073
0.0643
refined
-0.2451
13.6018
14.5107
X-RAY DIFFRACTION
A
1
A
11
X-RAY DIFFRACTION
1
A
12
A
36
X-RAY DIFFRACTION
2
A
37
A
78
X-RAY DIFFRACTION
3
A
81
A
97
X-RAY DIFFRACTION
4
A
98
A
124
X-RAY DIFFRACTION
5
A
125
A
142
X-RAY DIFFRACTION
6
author_and_software_defined_assembly
PISA
1
monomeric
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
ASP
40
A
OD1
ASP
40
1_555
82.0
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
THR
41
A
O
THR
41
1_555
92.6
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
THR
41
A
O
THR
41
1_555
81.4
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O5P
THP
1_555
89.8
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O5P
THP
1_555
74.0
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O5P
THP
1_555
154.6
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
309
F
O
HOH
1_555
73.9
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
309
F
O
HOH
1_555
139.2
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
309
F
O
HOH
1_555
131.2
A
THP
202
C
O5P
THP
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
309
F
O
HOH
1_555
73.6
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
85.3
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
145.0
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
66.8
A
THP
202
C
O5P
THP
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
138.6
A
HOH
309
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
65.6
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
156.7
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
97.9
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
110.5
A
THP
202
C
O5P
THP
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
68.0
A
HOH
309
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
92.2
A
HOH
322
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
106.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
97
A
O
LYS
91
A
N
ALA
94
A
N
ALA
88
A
O
TYR
91
A
O
TYR
85
A
N
GLU
75
A
N
GLU
69
A
O
VAL
74
A
O
VAL
68
A
N
GLU
10
A
N
GLU
10
A
N
THR
13
A
N
THR
13
A
O
MET
26
A
O
MET
26
A
N
VAL
23
A
N
VAL
23
A
O
PHE
34
A
O
PHE
34
A
N
ARG
35
A
N
ARG
35
A
O
GLY
88
A
O
GLY
82
A
N
ASP
40
A
N
ASP
40
A
O
LYS
110
A
O
LYS
104
1
A
ASP
143
A
ASP
137
1
Y
1
A
ASN
144
A
ASN
138
1
Y
1
A
ALA
145
A
ALA
139
1
Y
1
A
ASP
146
A
ASP
140
1
Y
1
A
SER
147
A
SER
141
1
Y
1
A
GLY
148
A
GLY
142
1
Y
1
A
GLN
149
A
GLN
143
1
Y
1
A
ILE
18
-105.40
-61.12
1
A
TYR
54
81.49
-5.15
1
A
ASN
138
47.30
-111.30
58.360
14.7204
5.610
0.0300
0.0000
0.1100
0.4500
0.0000
-0.4800
0.9660
0.9570
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
U VALUES : WITH TLS ADDED
0.1789
0.1503
0.1518
0.1518
1.600
34.13
825
16297
16297
5.1
99.77
0.1702
0.1441
1.000
0.400
0.9018
2.4800
0.0500
0.0855
0.0834
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.0850
0.0830
0.8000
0.8000
1.2000
PDB ENTRY 3BDC
MAXIMUM LIKELIHOOD
MASK
1.600
34.13
138
1260
39
0
1083
0.018
0.020
1148
0.001
0.020
1134
1.942
2.015
1550
0.886
3.000
2625
6.043
5.000
139
36.264
25.417
48
13.903
15.000
222
10.562
15.000
4
0.107
0.200
170
0.012
0.020
1241
0.004
0.020
235
0.2030
0.1660
1.642
65
1121
1186
20
97.61
20.4
1.600
50.0
4IUN
16317
16317
0
0
0.0210
1
39.11
10.13
99.8
0.2199
1.6
1.63
4.49
572
1
2.55
95.3
data reduction
http://www.bruker-axs.de/
SAINT
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
Mon Jun 27 09:33:44 2011 (svn )
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
2.3.0
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
APEX
data scaling
SAINT
Crystal structure of Staphylococcal nuclease variant Delta+PHS R126E at cryogenic temperature
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
TYR
54
A
TYR
48
HELX_P
A
ASN
68
A
ASN
62
1
1
15
A
VAL
99
A
VAL
93
HELX_P
A
GLN
106
A
GLN
100
1
2
8
A
TYR
115
A
TYR
109
HELX_P
A
ASN
119
A
ASN
113
5
3
5
A
HIS
121
A
HIS
115
HELX_P
A
GLU
135
A
GLU
129
1
4
15
A
LEU
137
A
LEU
131
HELX_P
A
SER
141
A
SER
135
5
5
5
metalc
2.890
A
ASP
21
A
OD2
ASP
21
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.664
A
ASP
40
A
OD1
ASP
40
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.730
A
THR
41
A
O
THR
41
1_555
A
CA
201
B
CA
CA
1_555
metalc
2.894
A
CA
201
B
CA
CA
1_555
A
THP
202
C
O5P
THP
1_555
metalc
2.804
A
CA
201
B
CA
CA
1_555
A
HOH
309
F
O
HOH
1_555
metalc
2.832
A
CA
201
B
CA
CA
1_555
A
HOH
322
F
O
HOH
1_555
metalc
2.781
A
CA
201
B
CA
CA
1_555
A
HOH
351
F
O
HOH
1_555
HYDROLASE
nuclease, hyperstable, pdTp, ion pair, HYDROLASE
NUC_STAAU
UNP
1
83
P00644
ATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQ
RTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWSEDNADSGQ
83
231
4IUN
1
149
P00644
A
1
1
143
1
THR
deletion
4IUN
A
P00644
UNP
126
1
LYS
deletion
4IUN
A
P00644
UNP
127
1
HIS
deletion
4IUN
A
P00644
UNP
128
1
PRO
deletion
4IUN
A
P00644
UNP
129
1
LYS
deletion
4IUN
A
P00644
UNP
130
1
LYS
deletion
4IUN
A
P00644
UNP
131
1
GLY
engineered mutation
PHE
50
4IUN
A
P00644
UNP
132
44
1
VAL
engineered mutation
ASN
51
4IUN
A
P00644
UNP
133
45
1
PRO
engineered mutation
GLY
117
4IUN
A
P00644
UNP
199
111
1
HIS
engineered mutation
LEU
124
4IUN
A
P00644
UNP
206
118
1
ARG
engineered mutation
GLU
126
4IUN
A
P00644
UNP
208
120
1
SER
engineered mutation
ALA
128
4IUN
A
P00644
UNP
210
122
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
LYS
97
A
LYS
91
A
MET
98
A
MET
92
A
GLY
88
A
GLY
82
A
ALA
94
A
ALA
88
A
ILE
72
A
ILE
66
A
GLU
75
A
GLU
69
A
GLU
10
A
GLU
10
A
ASP
19
A
ASP
19
A
THR
22
A
THR
22
A
TYR
27
A
TYR
27
A
GLN
30
A
GLN
30
A
LEU
36
A
LEU
36
A
GLY
88
A
GLY
82
A
ALA
94
A
ALA
88
A
VAL
39
A
VAL
39
A
ASP
40
A
ASP
40
A
LYS
110
A
LYS
104
A
VAL
111
A
VAL
105
BINDING SITE FOR RESIDUE CA A 201
A
CA
201
Software
7
BINDING SITE FOR RESIDUE THP A 202
A
THP
202
Software
26
BINDING SITE FOR RESIDUE PO4 A 203
A
PO4
203
Software
5
BINDING SITE FOR RESIDUE MPD A 204
A
MPD
204
Software
7
A
ASP
21
A
ASP
21
7
1_555
A
ASP
40
A
ASP
40
7
1_555
A
THR
41
A
THR
41
7
1_555
A
THP
202
C
THP
7
1_555
A
HOH
309
F
HOH
7
1_555
A
HOH
322
F
HOH
7
1_555
A
HOH
351
F
HOH
7
1_555
A
ALA
1
A
ALA
1
26
1_656
A
ARG
35
A
ARG
35
26
1_555
A
LEU
36
A
LEU
36
26
1_555
A
ASP
40
A
ASP
40
26
1_555
A
ASP
83
A
ASP
77
26
1_555
A
LYS
84
A
LYS
78
26
1_555
A
TYR
85
A
TYR
79
26
1_555
A
ARG
87
A
ARG
81
26
1_555
A
LEU
89
A
LEU
83
26
1_555
A
TYR
113
A
TYR
107
26
1_555
A
LYS
127
A
LYS
121
26
1_655
A
CA
201
B
CA
26
1_555
A
MPD
204
E
MPD
26
1_555
A
HOH
302
F
HOH
26
1_555
A
HOH
305
F
HOH
26
1_555
A
HOH
309
F
HOH
26
1_555
A
HOH
325
F
HOH
26
1_555
A
HOH
327
F
HOH
26
1_555
A
HOH
330
F
HOH
26
1_555
A
HOH
347
F
HOH
26
1_555
A
HOH
351
F
HOH
26
1_555
A
HOH
356
F
HOH
26
1_555
A
HOH
365
F
HOH
26
1_555
A
HOH
400
F
HOH
26
1_555
A
HOH
427
F
HOH
26
1_555
A
HOH
437
F
HOH
26
1_555
A
HIS
8
A
HIS
8
5
1_555
A
GLU
10
A
GLU
10
5
1_555
A
TYR
27
A
TYR
27
5
1_555
A
LYS
64
A
LYS
58
5
1_554
A
ARG
81
A
ARG
75
5
1_555
A
ALA
1
A
ALA
1
7
1_656
A
THR
2
A
THR
2
7
1_656
A
LEU
124
A
LEU
118
7
1_655
A
LYS
127
A
LYS
121
7
1_655
A
THP
202
C
THP
7
1_555
A
HOH
337
F
HOH
7
1_655
A
HOH
384
F
HOH
7
1_555
4
P 1 21 1