0.011792 0.006808 0.000000 0.000000 0.013616 0.000000 0.000000 0.000000 0.016297 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 84.802 84.802 61.362 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of a hypothetical protein (BACUNI_04699) from Bacteroides uniformis ATCC 8492 at 2.00 A resolution 10.2210/pdb4iyk/pdb pdb_00004iyk 100 1 KOHZU: Double Crystal Si(111) CCD 2012-11-21 ADSC QUANTUM 315 Double Crystal Si(111) MAD M x-ray 1 0.918401 1.0 0.979369 1.0 0.979152 1.0 8.2.2 ALS 0.918401,0.979369,0.979152 SYNCHROTRON ALS BEAMLINE 8.2.2 25121.566 Uncharacterized protein UNP residues 15-238 1 man polymer 35.453 CHLORIDE ION 2 syn non-polymer 62.068 1,2-ETHANEDIOL 6 syn non-polymer 18.015 water 241 nat water no yes GLTSCEIDNYEGPDASIHGSILDEQTGELVGSD(MSE)ENGNAIKVREHGFTNATDQTWYITNTGEYRNN(MSE)VFAAT YDVRFENGNFYPFEVKDFVVKSGDNVYDFKVIPYIRVKSPKVEKNGNVITATFSLEAGKQEVKLKEIQLFAFSD(MSE)W VGNNVKLTLNGGTDKQVFSPSTAINSADIYTLSIDLGQNADVLKYSKNYYFRIGALADVSGVGTVRHNYAPVVVIKL GLTSCEIDNYEGPDASIHGSILDEQTGELVGSDMENGNAIKVREHGFTNATDQTWYITNTGEYRNNMVFAATYDVRFENG NFYPFEVKDFVVKSGDNVYDFKVIPYIRVKSPKVEKNGNVITATFSLEAGKQEVKLKEIQLFAFSDMWVGNNVKLTLNGG TDKQVFSPSTAINSADIYTLSIDLGQNADVLKYSKNYYFRIGALADVSGVGTVRHNYAPVVVIKL A JCSG-417960 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 8492 411479 Bacteroides uniformis 562 Escherichia coli PB1 Plasmid SpeedET 1 2.54 51.49 VAPOR DIFFUSION, SITTING DROP 7.0 1.00M lithium chloride, 20.00% polyethylene glycol 6000, 0.1M HEPES pH 7.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 Joint Center for Structural Genomics JCSG PSI:Biology software database_2 struct_conn struct_ref_seq_dif struct_site repository Initial release Structure summary Refinement description Database references Derived calculations 1 0 2013-02-20 1 1 2014-12-24 1 2 2017-11-15 1 3 2023-02-01 _software.classification _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2013-01-28 REL REL CL CHLORIDE ION EDO 1,2-ETHANEDIOL HOH water THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 15-238 OF THE TARGET SEQUENCE. CL 300 2 CL CL 300 A CL 301 2 CL CL 301 A EDO 302 3 EDO EDO 302 A EDO 303 3 EDO EDO 303 A EDO 304 3 EDO EDO 304 A EDO 305 3 EDO EDO 305 A EDO 306 3 EDO EDO 306 A EDO 307 3 EDO EDO 307 A HOH 308 4 HOH HOH 401 A HOH 309 4 HOH HOH 402 A HOH 310 4 HOH HOH 403 A HOH 311 4 HOH HOH 404 A HOH 312 4 HOH HOH 405 A HOH 313 4 HOH HOH 406 A HOH 314 4 HOH HOH 407 A HOH 315 4 HOH HOH 408 A HOH 316 4 HOH HOH 409 A HOH 317 4 HOH HOH 410 A HOH 318 4 HOH HOH 411 A HOH 319 4 HOH HOH 412 A HOH 320 4 HOH HOH 413 A HOH 321 4 HOH HOH 414 A HOH 322 4 HOH HOH 415 A HOH 323 4 HOH HOH 416 A HOH 324 4 HOH HOH 417 A HOH 325 4 HOH HOH 418 A HOH 326 4 HOH HOH 419 A HOH 327 4 HOH HOH 420 A HOH 328 4 HOH HOH 421 A HOH 329 4 HOH HOH 422 A HOH 330 4 HOH HOH 423 A HOH 331 4 HOH HOH 424 A HOH 332 4 HOH HOH 425 A HOH 333 4 HOH HOH 426 A HOH 334 4 HOH HOH 427 A HOH 335 4 HOH HOH 428 A HOH 336 4 HOH HOH 429 A HOH 337 4 HOH HOH 430 A HOH 338 4 HOH HOH 431 A HOH 339 4 HOH HOH 432 A HOH 340 4 HOH HOH 433 A HOH 341 4 HOH HOH 434 A HOH 342 4 HOH HOH 435 A HOH 343 4 HOH HOH 436 A HOH 344 4 HOH HOH 437 A HOH 345 4 HOH HOH 438 A HOH 346 4 HOH HOH 439 A HOH 347 4 HOH HOH 440 A HOH 348 4 HOH HOH 441 A HOH 349 4 HOH HOH 442 A HOH 350 4 HOH HOH 443 A HOH 351 4 HOH HOH 444 A HOH 352 4 HOH HOH 445 A HOH 353 4 HOH HOH 446 A HOH 354 4 HOH HOH 447 A HOH 355 4 HOH HOH 448 A HOH 356 4 HOH HOH 449 A HOH 357 4 HOH HOH 450 A HOH 358 4 HOH HOH 451 A HOH 359 4 HOH HOH 452 A HOH 360 4 HOH HOH 453 A HOH 361 4 HOH HOH 454 A HOH 362 4 HOH HOH 455 A HOH 363 4 HOH HOH 456 A HOH 364 4 HOH HOH 457 A HOH 365 4 HOH HOH 458 A HOH 366 4 HOH HOH 459 A HOH 367 4 HOH HOH 460 A HOH 368 4 HOH HOH 461 A HOH 369 4 HOH HOH 462 A HOH 370 4 HOH HOH 463 A HOH 371 4 HOH HOH 464 A HOH 372 4 HOH HOH 465 A HOH 373 4 HOH HOH 466 A HOH 374 4 HOH HOH 467 A HOH 375 4 HOH HOH 468 A HOH 376 4 HOH HOH 469 A HOH 377 4 HOH HOH 470 A HOH 378 4 HOH HOH 471 A HOH 379 4 HOH HOH 472 A HOH 380 4 HOH HOH 473 A HOH 381 4 HOH HOH 474 A HOH 382 4 HOH HOH 475 A HOH 383 4 HOH HOH 476 A HOH 384 4 HOH HOH 477 A HOH 385 4 HOH HOH 478 A HOH 386 4 HOH HOH 479 A HOH 387 4 HOH HOH 480 A HOH 388 4 HOH HOH 481 A HOH 389 4 HOH HOH 482 A HOH 390 4 HOH HOH 483 A HOH 391 4 HOH HOH 484 A HOH 392 4 HOH HOH 485 A HOH 393 4 HOH HOH 486 A HOH 394 4 HOH HOH 487 A HOH 395 4 HOH HOH 488 A HOH 396 4 HOH HOH 489 A HOH 397 4 HOH HOH 490 A HOH 398 4 HOH HOH 491 A HOH 399 4 HOH HOH 492 A HOH 400 4 HOH HOH 493 A HOH 401 4 HOH HOH 494 A HOH 402 4 HOH HOH 495 A HOH 403 4 HOH HOH 496 A HOH 404 4 HOH HOH 497 A HOH 405 4 HOH HOH 498 A HOH 406 4 HOH HOH 499 A HOH 407 4 HOH HOH 500 A HOH 408 4 HOH HOH 501 A HOH 409 4 HOH HOH 502 A HOH 410 4 HOH HOH 503 A HOH 411 4 HOH HOH 504 A HOH 412 4 HOH HOH 505 A HOH 413 4 HOH HOH 506 A HOH 414 4 HOH HOH 507 A HOH 415 4 HOH HOH 508 A HOH 416 4 HOH HOH 509 A HOH 417 4 HOH HOH 510 A HOH 418 4 HOH HOH 511 A HOH 419 4 HOH HOH 512 A HOH 420 4 HOH HOH 513 A HOH 421 4 HOH HOH 514 A HOH 422 4 HOH HOH 515 A HOH 423 4 HOH HOH 516 A HOH 424 4 HOH HOH 517 A HOH 425 4 HOH HOH 518 A HOH 426 4 HOH HOH 519 A HOH 427 4 HOH HOH 520 A HOH 428 4 HOH HOH 521 A HOH 429 4 HOH HOH 522 A HOH 430 4 HOH HOH 523 A HOH 431 4 HOH HOH 524 A HOH 432 4 HOH HOH 525 A HOH 433 4 HOH HOH 526 A HOH 434 4 HOH HOH 527 A HOH 435 4 HOH HOH 528 A HOH 436 4 HOH HOH 529 A HOH 437 4 HOH HOH 530 A HOH 438 4 HOH HOH 531 A HOH 439 4 HOH HOH 532 A HOH 440 4 HOH HOH 533 A HOH 441 4 HOH HOH 534 A HOH 442 4 HOH HOH 535 A HOH 443 4 HOH HOH 536 A HOH 444 4 HOH HOH 537 A HOH 445 4 HOH HOH 538 A HOH 446 4 HOH HOH 539 A HOH 447 4 HOH HOH 540 A HOH 448 4 HOH HOH 541 A HOH 449 4 HOH HOH 542 A HOH 450 4 HOH HOH 543 A HOH 451 4 HOH HOH 544 A HOH 452 4 HOH HOH 545 A HOH 453 4 HOH HOH 546 A HOH 454 4 HOH HOH 547 A HOH 455 4 HOH HOH 548 A HOH 456 4 HOH HOH 549 A HOH 457 4 HOH HOH 550 A HOH 458 4 HOH HOH 551 A HOH 459 4 HOH HOH 552 A HOH 460 4 HOH HOH 553 A HOH 461 4 HOH HOH 554 A HOH 462 4 HOH HOH 555 A HOH 463 4 HOH HOH 556 A HOH 464 4 HOH HOH 557 A HOH 465 4 HOH HOH 558 A HOH 466 4 HOH HOH 559 A HOH 467 4 HOH HOH 560 A HOH 468 4 HOH HOH 561 A HOH 469 4 HOH HOH 562 A HOH 470 4 HOH HOH 563 A HOH 471 4 HOH HOH 564 A HOH 472 4 HOH HOH 565 A HOH 473 4 HOH HOH 566 A HOH 474 4 HOH HOH 567 A HOH 475 4 HOH HOH 568 A HOH 476 4 HOH HOH 569 A HOH 477 4 HOH HOH 570 A HOH 478 4 HOH HOH 571 A HOH 479 4 HOH HOH 572 A HOH 480 4 HOH HOH 573 A HOH 481 4 HOH HOH 574 A HOH 482 4 HOH HOH 575 A HOH 483 4 HOH HOH 576 A HOH 484 4 HOH HOH 577 A HOH 485 4 HOH HOH 578 A HOH 486 4 HOH HOH 579 A HOH 487 4 HOH HOH 580 A HOH 488 4 HOH HOH 581 A HOH 489 4 HOH HOH 582 A HOH 490 4 HOH HOH 583 A HOH 491 4 HOH HOH 584 A HOH 492 4 HOH HOH 585 A HOH 493 4 HOH HOH 586 A HOH 494 4 HOH HOH 587 A HOH 495 4 HOH HOH 588 A HOH 496 4 HOH HOH 589 A HOH 497 4 HOH HOH 590 A HOH 498 4 HOH HOH 591 A HOH 499 4 HOH HOH 592 A HOH 500 4 HOH HOH 593 A HOH 501 4 HOH HOH 594 A HOH 502 4 HOH HOH 595 A HOH 503 4 HOH HOH 596 A HOH 504 4 HOH HOH 597 A HOH 505 4 HOH HOH 598 A HOH 506 4 HOH HOH 599 A HOH 507 4 HOH HOH 600 A HOH 508 4 HOH HOH 601 A HOH 509 4 HOH HOH 602 A HOH 510 4 HOH HOH 603 A HOH 511 4 HOH HOH 604 A HOH 512 4 HOH HOH 605 A HOH 513 4 HOH HOH 606 A HOH 514 4 HOH HOH 607 A HOH 515 4 HOH HOH 608 A HOH 516 4 HOH HOH 609 A HOH 517 4 HOH HOH 610 A HOH 518 4 HOH HOH 611 A HOH 519 4 HOH HOH 612 A HOH 520 4 HOH HOH 613 A HOH 521 4 HOH HOH 614 A HOH 522 4 HOH HOH 615 A HOH 523 4 HOH HOH 616 A HOH 524 4 HOH HOH 617 A HOH 525 4 HOH HOH 618 A HOH 526 4 HOH HOH 619 A HOH 527 4 HOH HOH 620 A HOH 528 4 HOH HOH 621 A HOH 529 4 HOH HOH 622 A HOH 530 4 HOH HOH 623 A HOH 531 4 HOH HOH 624 A HOH 532 4 HOH HOH 625 A HOH 533 4 HOH HOH 626 A HOH 534 4 HOH HOH 627 A HOH 535 4 HOH HOH 628 A HOH 536 4 HOH HOH 629 A HOH 537 4 HOH HOH 630 A HOH 538 4 HOH HOH 631 A HOH 539 4 HOH HOH 632 A HOH 540 4 HOH HOH 633 A HOH 541 4 HOH HOH 634 A HOH 542 4 HOH HOH 635 A HOH 543 4 HOH HOH 636 A HOH 544 4 HOH HOH 637 A HOH 545 4 HOH HOH 638 A HOH 546 4 HOH HOH 639 A HOH 547 4 HOH HOH 640 A HOH 548 4 HOH HOH 641 A n 1 0 A n 2 15 A n 3 16 A n 4 17 A n 5 18 A n 6 19 A n 7 20 A n 8 21 A n 9 22 A n 10 23 A n 11 24 A GLY 25 n 12 GLY 25 A PRO 26 n 13 PRO 26 A ASP 27 n 14 ASP 27 A ALA 28 n 15 ALA 28 A SER 29 n 16 SER 29 A ILE 30 n 17 ILE 30 A HIS 31 n 18 HIS 31 A GLY 32 n 19 GLY 32 A SER 33 n 20 SER 33 A ILE 34 n 21 ILE 34 A LEU 35 n 22 LEU 35 A ASP 36 n 23 ASP 36 A GLU 37 n 24 GLU 37 A GLN 38 n 25 GLN 38 A THR 39 n 26 THR 39 A GLY 40 n 27 GLY 40 A GLU 41 n 28 GLU 41 A LEU 42 n 29 LEU 42 A VAL 43 n 30 VAL 43 A GLY 44 n 31 GLY 44 A SER 45 n 32 SER 45 A ASP 46 n 33 ASP 46 A MSE 47 n 34 MSE 47 A GLU 48 n 35 GLU 48 A ASN 49 n 36 ASN 49 A GLY 50 n 37 GLY 50 A ASN 51 n 38 ASN 51 A ALA 52 n 39 ALA 52 A ILE 53 n 40 ILE 53 A LYS 54 n 41 LYS 54 A VAL 55 n 42 VAL 55 A ARG 56 n 43 ARG 56 A GLU 57 n 44 GLU 57 A HIS 58 n 45 HIS 58 A GLY 59 n 46 GLY 59 A n 47 60 A n 48 61 A n 49 62 A n 50 63 A THR 64 n 51 THR 64 A ASP 65 n 52 ASP 65 A GLN 66 n 53 GLN 66 A THR 67 n 54 THR 67 A TRP 68 n 55 TRP 68 A TYR 69 n 56 TYR 69 A ILE 70 n 57 ILE 70 A THR 71 n 58 THR 71 A ASN 72 n 59 ASN 72 A THR 73 n 60 THR 73 A GLY 74 n 61 GLY 74 A GLU 75 n 62 GLU 75 A TYR 76 n 63 TYR 76 A ARG 77 n 64 ARG 77 A ASN 78 n 65 ASN 78 A ASN 79 n 66 ASN 79 A MSE 80 n 67 MSE 80 A VAL 81 n 68 VAL 81 A PHE 82 n 69 PHE 82 A ALA 83 n 70 ALA 83 A ALA 84 n 71 ALA 84 A THR 85 n 72 THR 85 A TYR 86 n 73 TYR 86 A ASP 87 n 74 ASP 87 A VAL 88 n 75 VAL 88 A ARG 89 n 76 ARG 89 A PHE 90 n 77 PHE 90 A GLU 91 n 78 GLU 91 A ASN 92 n 79 ASN 92 A GLY 93 n 80 GLY 93 A ASN 94 n 81 ASN 94 A PHE 95 n 82 PHE 95 A TYR 96 n 83 TYR 96 A PRO 97 n 84 PRO 97 A PHE 98 n 85 PHE 98 A GLU 99 n 86 GLU 99 A VAL 100 n 87 VAL 100 A LYS 101 n 88 LYS 101 A ASP 102 n 89 ASP 102 A PHE 103 n 90 PHE 103 A VAL 104 n 91 VAL 104 A VAL 105 n 92 VAL 105 A LYS 106 n 93 LYS 106 A SER 107 n 94 SER 107 A GLY 108 n 95 GLY 108 A ASP 109 n 96 ASP 109 A ASN 110 n 97 ASN 110 A VAL 111 n 98 VAL 111 A TYR 112 n 99 TYR 112 A ASP 113 n 100 ASP 113 A PHE 114 n 101 PHE 114 A LYS 115 n 102 LYS 115 A VAL 116 n 103 VAL 116 A ILE 117 n 104 ILE 117 A PRO 118 n 105 PRO 118 A TYR 119 n 106 TYR 119 A ILE 120 n 107 ILE 120 A ARG 121 n 108 ARG 121 A VAL 122 n 109 VAL 122 A LYS 123 n 110 LYS 123 A SER 124 n 111 SER 124 A PRO 125 n 112 PRO 125 A LYS 126 n 113 LYS 126 A VAL 127 n 114 VAL 127 A GLU 128 n 115 GLU 128 A LYS 129 n 116 LYS 129 A ASN 130 n 117 ASN 130 A GLY 131 n 118 GLY 131 A ASN 132 n 119 ASN 132 A VAL 133 n 120 VAL 133 A ILE 134 n 121 ILE 134 A THR 135 n 122 THR 135 A ALA 136 n 123 ALA 136 A THR 137 n 124 THR 137 A PHE 138 n 125 PHE 138 A SER 139 n 126 SER 139 A LEU 140 n 127 LEU 140 A GLU 141 n 128 GLU 141 A ALA 142 n 129 ALA 142 A GLY 143 n 130 GLY 143 A LYS 144 n 131 LYS 144 A GLN 145 n 132 GLN 145 A GLU 146 n 133 GLU 146 A VAL 147 n 134 VAL 147 A LYS 148 n 135 LYS 148 A LEU 149 n 136 LEU 149 A LYS 150 n 137 LYS 150 A GLU 151 n 138 GLU 151 A ILE 152 n 139 ILE 152 A GLN 153 n 140 GLN 153 A LEU 154 n 141 LEU 154 A PHE 155 n 142 PHE 155 A ALA 156 n 143 ALA 156 A PHE 157 n 144 PHE 157 A SER 158 n 145 SER 158 A ASP 159 n 146 ASP 159 A MSE 160 n 147 MSE 160 A TRP 161 n 148 TRP 161 A VAL 162 n 149 VAL 162 A GLY 163 n 150 GLY 163 A ASN 164 n 151 ASN 164 A ASN 165 n 152 ASN 165 A VAL 166 n 153 VAL 166 A LYS 167 n 154 LYS 167 A LEU 168 n 155 LEU 168 A THR 169 n 156 THR 169 A LEU 170 n 157 LEU 170 A ASN 171 n 158 ASN 171 A GLY 172 n 159 GLY 172 A GLY 173 n 160 GLY 173 A THR 174 n 161 THR 174 A ASP 175 n 162 ASP 175 A LYS 176 n 163 LYS 176 A GLN 177 n 164 GLN 177 A VAL 178 n 165 VAL 178 A PHE 179 n 166 PHE 179 A SER 180 n 167 SER 180 A PRO 181 n 168 PRO 181 A SER 182 n 169 SER 182 A THR 183 n 170 THR 183 A ALA 184 n 171 ALA 184 A ILE 185 n 172 ILE 185 A ASN 186 n 173 ASN 186 A SER 187 n 174 SER 187 A ALA 188 n 175 ALA 188 A ASP 189 n 176 ASP 189 A ILE 190 n 177 ILE 190 A TYR 191 n 178 TYR 191 A THR 192 n 179 THR 192 A LEU 193 n 180 LEU 193 A SER 194 n 181 SER 194 A ILE 195 n 182 ILE 195 A ASP 196 n 183 ASP 196 A LEU 197 n 184 LEU 197 A GLY 198 n 185 GLY 198 A GLN 199 n 186 GLN 199 A ASN 200 n 187 ASN 200 A ALA 201 n 188 ALA 201 A ASP 202 n 189 ASP 202 A VAL 203 n 190 VAL 203 A LEU 204 n 191 LEU 204 A LYS 205 n 192 LYS 205 A TYR 206 n 193 TYR 206 A SER 207 n 194 SER 207 A LYS 208 n 195 LYS 208 A ASN 209 n 196 ASN 209 A TYR 210 n 197 TYR 210 A TYR 211 n 198 TYR 211 A PHE 212 n 199 PHE 212 A ARG 213 n 200 ARG 213 A ILE 214 n 201 ILE 214 A GLY 215 n 202 GLY 215 A ALA 216 n 203 ALA 216 A LEU 217 n 204 LEU 217 A ALA 218 n 205 ALA 218 A ASP 219 n 206 ASP 219 A VAL 220 n 207 VAL 220 A SER 221 n 208 SER 221 A GLY 222 n 209 GLY 222 A VAL 223 n 210 VAL 223 A GLY 224 n 211 GLY 224 A THR 225 n 212 THR 225 A VAL 226 n 213 VAL 226 A ARG 227 n 214 ARG 227 A HIS 228 n 215 HIS 228 A ASN 229 n 216 ASN 229 A TYR 230 n 217 TYR 230 A ALA 231 n 218 ALA 231 A PRO 232 n 219 PRO 232 A VAL 233 n 220 VAL 233 A VAL 234 n 221 VAL 234 A VAL 235 n 222 VAL 235 A ILE 236 n 223 ILE 236 A LYS 237 n 224 LYS 237 A LEU 238 n 225 LEU 238 A 3.0947 0.5034 0.4162 0.5762 0.4398 1.6726 -0.0429 -0.5755 -0.0438 -0.0046 0.0287 -0.0382 -0.1287 -0.4381 0.0143 -0.1576 0.0916 0.0452 0.0928 0.0180 -0.1456 refined 22.6843 35.2450 26.9267 X-RAY DIFFRACTION A 25 A 238 X-RAY DIFFRACTION 1 { A|25 - A|238 } author_and_software_defined_assembly PISA 1 monomeric A MSE 47 SELENOMETHIONINE A MSE 34 MET A MSE 80 SELENOMETHIONINE A MSE 67 MET A MSE 160 SELENOMETHIONINE A MSE 147 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ASN 78 A O ASN 65 A N ILE 30 A N ILE 17 A N SER 29 A N SER 16 A O GLY 108 A O GLY 95 A O ASN 78 A O ASN 65 A N ILE 30 A N ILE 17 A N LEU 35 A N LEU 22 A O PHE 114 A O PHE 101 A O TRP 68 A O TRP 55 A N ILE 53 A N ILE 40 A N LYS 54 A N LYS 41 A O ARG 89 A O ARG 76 A N TYR 86 A N TYR 73 A O PHE 103 A O PHE 90 A N LYS 123 A N LYS 110 A O SER 139 A O SER 126 A N PHE 138 A N PHE 125 A O TYR 191 A O TYR 178 A O THR 183 A O THR 170 A N LEU 149 A N LEU 136 A N GLN 153 A N GLN 140 A O GLY 215 A O GLY 202 A N ALA 216 A N ALA 203 A O ASN 229 A O ASN 216 A O THR 183 A O THR 170 A N LEU 149 A N LEU 136 A N GLN 153 A N GLN 140 A O GLY 215 A O GLY 202 A N TYR 210 A N TYR 197 A O ILE 236 A O ILE 223 1 A GLY 0 A GLY 1 1 Y 1 A LEU 15 A LEU 2 1 Y 1 A THR 16 A THR 3 1 Y 1 A SER 17 A SER 4 1 Y 1 A CYS 18 A CYS 5 1 Y 1 A GLU 19 A GLU 6 1 Y 1 A ILE 20 A ILE 7 1 Y 1 A ASP 21 A ASP 8 1 Y 1 A ASN 22 A ASN 9 1 Y 1 A TYR 23 A TYR 10 1 Y 1 A GLU 24 A GLU 11 1 Y 1 A PHE 60 A PHE 47 1 Y 1 A THR 61 A THR 48 1 Y 1 A ASN 62 A ASN 49 1 Y 1 A ALA 63 A ALA 50 1 Y 1 A SER 45 -151.07 -158.39 1 A SER 207 76.85 -1.89 133.920 42.1207 18.310 -4.6191 0.0000 0.0000 -4.6191 0.0000 9.2382 0.9480 0.9331 1.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3.ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4.CHLORIDE (CL) AND 1,2-ETHANEDIOL (EDO) FROM THE CRYSTALLIZATION AND CRYOPROTECTANT SOLUTION ARE MODELED. 0.2070 0.1735 0.1752 2.0000 28.310 864 17006 5.0800 99.4700 1.000 0.150 RANDOM 1 THROUGHOUT 0.000 MAD 0.310 2.0000 28.310 241 1914 26 0 1647 806 SINUSOIDAL 2.000 53 HARMONIC 2.000 252 HARMONIC 5.000 1738 HARMONIC 20.000 224 SEMIHARMONIC 5.000 2059 SEMIHARMONIC 4.000 0.010 1738 HARMONIC 2.000 1.090 2351 HARMONIC 2.000 3.830 2.770 0.2276 0.2129 0.2137 2.1200 150 2531 2681 9 5.5900 99.4700 31.372 2.00 28.310 4IYK 17020 -3.000 0.049 1 15.220 98.000 0.440 2.000 2.070 2.2 7641 3040 1 92.000 0.335 2.070 2.150 3.2 9317 3178 1 98.500 0.241 2.150 2.250 4.3 9723 3326 1 98.500 0.184 2.250 2.370 5.7 9874 3382 1 98.400 0.132 2.370 2.520 7.8 9657 3302 1 98.900 0.098 2.520 2.710 10.6 9439 3232 1 98.600 0.061 2.710 2.990 16.6 9901 3401 1 98.900 0.035 2.990 3.420 26.9 9487 3277 1 98.700 0.027 3.420 4.300 34.4 9402 3286 1 99.200 0.022 4.300 28.310 39.1 9559 3334 1 98.500 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package March 15, 2012 refinement Gerard Bricogne buster-develop@GlobalPhasing.com http://www.globalphasing.com/buster/ BUSTER-TNT program data reduction XDS phasing SHELXD phasing autoSHARP refinement BUSTER 2.10.0 Crystal structure of a putative carbohydrate binding protein (BACUNI_04699) from Bacteroides uniformis ATCC 8492 at 2.00 A resolution 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N A GLY 198 A GLY 185 HELX_P A ALA 201 A ALA 188 5 1 4 covale 1.355 both A ASP 46 A C ASP 33 1_555 A MSE 47 A N MSE 34 1_555 covale 1.334 both A MSE 47 A C MSE 34 1_555 A GLU 48 A N GLU 35 1_555 covale 1.342 both A ASN 79 A C ASN 66 1_555 A MSE 80 A N MSE 67 1_555 covale 1.336 both A MSE 80 A C MSE 67 1_555 A VAL 81 A N VAL 68 1_555 covale 1.351 both A ASP 159 A C ASP 146 1_555 A MSE 160 A N MSE 147 1_555 covale 1.347 both A MSE 160 A C MSE 147 1_555 A TRP 161 A N TRP 148 1_555 STRUCTURAL GENOMICS, UNKNOWN FUNCTION PF12866 family protein, DUF3823, putative carbohydrate binding protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION A SER 180 A SER 167 1 A PRO 181 A PRO 168 0.66 A7VAR7_BACUN UNP 1 15 A7VAR7 LTSCEIDNYEGPDASIHGSILDEQTGELVGSDMENGNAIKVREHGFTNATDQTWYITNTGEYRNNMVFAATYDVRFENGN FYPFEVKDFVVKSGDNVYDFKVIPYIRVKSPKVEKNGNVITATFSLEAGKQEVKLKEIQLFAFSDMWVGNNVKLTLNGGT DKQVFSPSTAINSADIYTLSIDLGQNADVLKYSKNYYFRIGALADVSGVGTVRHNYAPVVVIKL 15 238 4IYK 15 238 A7VAR7 A 1 2 225 1 expression tag GLY 0 4IYK A A7VAR7 UNP 1 3 3 4 3 4 4 anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 75 A GLU 62 A VAL 81 A VAL 68 A ALA 28 A ALA 15 A ASP 36 A ASP 23 A GLY 108 A GLY 95 A VAL 111 A VAL 98 A GLU 75 A GLU 62 A VAL 81 A VAL 68 A ALA 28 A ALA 15 A ASP 36 A ASP 23 A PHE 114 A PHE 101 A VAL 116 A VAL 103 A GLN 66 A GLN 53 A TRP 68 A TRP 55 A ILE 53 A ILE 40 A GLU 57 A GLU 44 A ALA 84 A ALA 71 A PHE 90 A PHE 77 A PHE 98 A PHE 85 A VAL 105 A VAL 92 A ILE 120 A ILE 107 A ASN 130 A ASN 117 A VAL 133 A VAL 120 A ALA 142 A ALA 129 A TYR 191 A TYR 178 A ASP 196 A ASP 183 A LYS 176 A LYS 163 A ALA 184 A ALA 171 A LYS 148 A LYS 135 A PHE 157 A PHE 144 A ASN 209 A ASN 196 A ASP 219 A ASP 206 A ASN 229 A ASN 216 A TYR 230 A TYR 217 A LYS 176 A LYS 163 A ALA 184 A ALA 171 A LYS 148 A LYS 135 A PHE 157 A PHE 144 A ASN 209 A ASN 196 A ASP 219 A ASP 206 A VAL 234 A VAL 221 A LYS 237 A LYS 224 BINDING SITE FOR RESIDUE CL A 300 A CL 300 Software 1 BINDING SITE FOR RESIDUE CL A 301 A CL 301 Software 1 BINDING SITE FOR RESIDUE EDO A 302 A EDO 302 Software 2 BINDING SITE FOR RESIDUE EDO A 303 A EDO 303 Software 4 BINDING SITE FOR RESIDUE EDO A 304 A EDO 304 Software 2 BINDING SITE FOR RESIDUE EDO A 305 A EDO 305 Software 6 BINDING SITE FOR RESIDUE EDO A 306 A EDO 306 Software 4 BINDING SITE FOR RESIDUE EDO A 307 A EDO 307 Software 2 A ASN 209 A ASN 196 1 1_555 A GLN 145 A GLN 132 1 1_555 A TYR 112 A TYR 99 2 1_555 A ASP 113 A ASP 100 2 1_555 A ASN 164 A ASN 151 4 1_555 A VAL 226 A VAL 213 4 1_555 A ARG 227 A ARG 214 4 1_555 A HOH 446 J HOH 4 1_555 A VAL 178 A VAL 165 2 1_555 A SER 180 A SER 167 2 1_555 A LYS 144 A LYS 131 6 1_555 A GLU 146 A GLU 133 6 1_555 A TYR 211 A TYR 198 6 4_665 A VAL 235 A VAL 222 6 4_665 A HOH 562 J HOH 6 4_665 A HOH 596 J HOH 6 1_555 A ARG 77 A ARG 64 4 1_555 A ASN 79 A ASN 66 4 1_555 A ASP 109 A ASP 96 4 1_555 A PRO 181 A PRO 168 4 4_664 A TYR 112 A TYR 99 2 1_555 A LYS 115 A LYS 102 2 1_555 173 P 63