0.023127
0.000000
0.000000
-0.000000
0.017057
0.000000
0.000000
-0.000000
0.008630
0.000000
0.000000
0.000000
Osipiuk, J.
Nocek, B.
Gu, M.
Kwon, K.
Anderson, W.F.
Joachimiak, A.
Center for Structural Genomics of Infectious Diseases (CSGID)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
43.239
58.626
115.874
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
To be Published
0353
30S ribosomal protein S15 from Campylobacter jejuni
10.2210/pdb4iyl/pdb
pdb_00004iyl
100
1
CCD
2010-08-25
ADSC QUANTUM 315r
double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
19-ID
APS
0.9792
SYNCHROTRON
APS BEAMLINE 19-ID
10519.337
30S ribosomal protein S15
1
man
polymer
18.015
water
4
nat
water
no
no
SNAMALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNS
YSKLITELNLRDK
SNAMALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNS
YSKLITELNLRDK
A
CSGID-IDP90515
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
NCTC 11168
sample
Cj0884, rpsO
192222
Campylobacter jejuni subsp. jejuni
469008
Escherichia coli
BL21(DE3)
plasmid
pMCSG7
1
3.49
64.76
VAPOR DIFFUSION, SITTING DROP
7.1
0.49 M sodium phosphate, 0.91 M di-potassium phosphate, pH 7.1, VAPOR DIFFUSION, SITTING DROP, temperature 289K
289
Center for Structural Genomics of Infectious Diseases
CSGID
NIAID, National Institute of Allergy and Infectious Diseases
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Refinement description
Data collection
Database references
Refinement description
1
0
2013-02-06
1
1
2017-11-15
1
2
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
2013-02-06
SPRSDE
Y
RCSB
Y
RCSB
2013-01-28
REL
REL
HOH
water
2Y0Y
PDB ENTRY 2Y0Y
PDB
experimental model
HOH
1
2
HOH
HOH
101
A
HOH
12
2
HOH
HOH
102
A
HOH
13
2
HOH
HOH
103
A
HOH
30
2
HOH
HOH
104
A
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
n
5
2
A
LEU
3
n
6
LEU
3
A
ASP
4
n
7
ASP
4
A
SER
5
n
8
SER
5
A
ALA
6
n
9
ALA
6
A
LYS
7
n
10
LYS
7
A
LYS
8
n
11
LYS
8
A
ALA
9
n
12
ALA
9
A
GLU
10
n
13
GLU
10
A
ILE
11
n
14
ILE
11
A
VAL
12
n
15
VAL
12
A
ALA
13
n
16
ALA
13
A
LYS
14
n
17
LYS
14
A
PHE
15
n
18
PHE
15
A
ALA
16
n
19
ALA
16
A
LYS
17
n
20
LYS
17
A
LYS
18
n
21
LYS
18
A
PRO
19
n
22
PRO
19
A
GLY
20
n
23
GLY
20
A
ASP
21
n
24
ASP
21
A
THR
22
n
25
THR
22
A
GLY
23
n
26
GLY
23
A
SER
24
n
27
SER
24
A
THR
25
n
28
THR
25
A
GLU
26
n
29
GLU
26
A
VAL
27
n
30
VAL
27
A
GLN
28
n
31
GLN
28
A
VAL
29
n
32
VAL
29
A
ALA
30
n
33
ALA
30
A
LEU
31
n
34
LEU
31
A
LEU
32
n
35
LEU
32
A
THR
33
n
36
THR
33
A
ALA
34
n
37
ALA
34
A
ARG
35
n
38
ARG
35
A
ILE
36
n
39
ILE
36
A
ALA
37
n
40
ALA
37
A
GLU
38
n
41
GLU
38
A
LEU
39
n
42
LEU
39
A
THR
40
n
43
THR
40
A
GLU
41
n
44
GLU
41
A
HIS
42
n
45
HIS
42
A
LEU
43
n
46
LEU
43
A
LYS
44
n
47
LYS
44
A
ILE
45
n
48
ILE
45
A
TYR
46
n
49
TYR
46
A
LYS
47
n
50
LYS
47
A
LYS
48
n
51
LYS
48
A
ASP
49
n
52
ASP
49
A
PHE
50
n
53
PHE
50
A
SER
51
n
54
SER
51
A
SER
52
n
55
SER
52
A
ARG
53
n
56
ARG
53
A
LEU
54
n
57
LEU
54
A
GLY
55
n
58
GLY
55
A
LEU
56
n
59
LEU
56
A
LEU
57
n
60
LEU
57
A
LYS
58
n
61
LYS
58
A
LEU
59
n
62
LEU
59
A
VAL
60
n
63
VAL
60
A
GLY
61
n
64
GLY
61
A
GLN
62
n
65
GLN
62
A
ARG
63
n
66
ARG
63
A
LYS
64
n
67
LYS
64
A
ARG
65
n
68
ARG
65
A
LEU
66
n
69
LEU
66
A
LEU
67
n
70
LEU
67
A
SER
68
n
71
SER
68
A
TYR
69
n
72
TYR
69
A
LEU
70
n
73
LEU
70
A
LYS
71
n
74
LYS
71
A
ARG
72
n
75
ARG
72
A
LYS
73
n
76
LYS
73
A
ASP
74
n
77
ASP
74
A
TYR
75
n
78
TYR
75
A
ASN
76
n
79
ASN
76
A
SER
77
n
80
SER
77
A
TYR
78
n
81
TYR
78
A
SER
79
n
82
SER
79
A
LYS
80
n
83
LYS
80
A
LEU
81
n
84
LEU
81
A
ILE
82
n
85
ILE
82
A
THR
83
n
86
THR
83
A
GLU
84
n
87
GLU
84
A
LEU
85
n
88
LEU
85
A
ASN
86
n
89
ASN
86
A
LEU
87
n
90
LEU
87
A
n
91
88
A
n
92
89
A
n
93
90
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
3230
-33
11650
8540
-76
21220
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_656
-x+1,y,-z+1
crystal symmetry operation
43.2390000000
0.0000000000
115.8740000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-x+1,-y,z
crystal symmetry operation
43.2390000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_556
x,-y,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
115.8740000000
1
A
SER
-2
A
SER
1
1
Y
1
A
ASN
-1
A
ASN
2
1
Y
1
A
ALA
0
A
ALA
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
ALA
2
A
ALA
5
1
Y
1
A
ARG
88
A
ARG
91
1
Y
1
A
ASP
89
A
ASP
92
1
Y
1
A
LYS
90
A
LYS
93
1
Y
151.270
81.4788
45.600
1.6400
0.0000
0.0000
-5.4800
0.0000
3.8400
0.9420
0.9290
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.2809
0.2458
0.2474
0.2474
2.3600
32.2700
278
5992
5992
4.6000
94.3300
1.000
1.000
9.5750
0.1970
RANDOM
1
THROUGHOUT
0.000
0
MOLECULAR REPLACEMENT
0.2870
0.2370
0.8000
0.8000
1.2000
PDB ENTRY 2Y0Y
MAXIMUM LIKELIHOOD
MASK
2.3600
32.2700
4
682
0
0
678
0.012
0.019
685
0.001
0.020
725
1.611
2.016
915
0.771
3.000
1672
6.362
5.000
84
34.974
23.200
25
20.520
15.000
148
11.195
15.000
5
0.070
0.200
109
0.005
0.020
726
0.001
0.020
141
0.3730
0.3580
2.4230
15
351
366
366
20
79.3900
68.7
2.36
32.3
4IYL
5992
5992
0
0
0.098
1.390
1
10.200
3.600
95.200
0.587
2.380
2.420
2.02
265
0.951
1
2.500
88.300
0.605
2.420
2.470
290
1.091
1
2.700
95.400
0.612
2.470
2.510
303
1.013
1
2.800
97.400
0.619
2.510
2.560
301
0.957
1
3.100
95.600
0.475
2.560
2.620
291
1.111
1
3.200
98.600
0.435
2.620
2.680
301
1.107
1
3.400
99.000
0.442
2.680
2.750
311
1.041
1
3.700
96.000
0.387
2.750
2.820
305
1.264
1
3.700
99.700
0.319
2.820
2.900
295
1.160
1
4.100
95.500
0.300
2.900
3.000
306
1.261
1
4.000
99.700
0.219
3.000
3.110
308
1.399
1
4.000
95.700
0.199
3.110
3.230
294
1.372
1
4.100
98.700
0.154
3.230
3.380
304
1.554
1
4.000
95.300
0.117
3.380
3.550
304
1.709
1
4.000
98.700
0.085
3.550
3.780
302
1.643
1
4.000
95.600
0.078
3.780
4.070
312
1.693
1
3.900
95.700
0.062
4.070
4.480
304
1.529
1
3.700
95.600
0.067
4.480
5.130
302
1.800
1
3.500
95.900
0.078
5.130
6.460
308
1.783
1
3.600
93.100
0.068
6.460
50.000
286
1.805
1
3.100
78.400
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.7.0029
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
SBC-Collect
data reduction
HKL-3000
data scaling
HKL-3000
phasing
MOLREP
phasing
HKL-3000
30S ribosomal protein S15 from Campylobacter jejuni
1
N
N
2
N
N
biological unit is the same as asymmetric unit, based on ribosome structure
A
ASP
4
A
ASP
7
HELX_P
A
ALA
16
A
ALA
19
1
1
13
A
SER
24
A
SER
27
HELX_P
A
SER
52
A
SER
55
1
2
29
A
GLY
55
A
GLY
58
HELX_P
A
ASP
74
A
ASP
77
1
3
20
A
ASP
74
A
ASP
77
HELX_P
A
LEU
85
A
LEU
88
1
4
12
RIBOSOMAL PROTEIN
structural genomics, Center for Structural Genomics of Infectious Diseases, CSGID, rRNA binding, translation, NIAID, National Institute of Allergy and Infectious Diseases, RIBOSOMAL PROTEIN
RS15_CAMJE
UNP
1
1
Q0PA13
MALDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLLKLVGQRKRLLSYLKRKDYNSYSK
LITELNLRDK
1
90
4IYL
1
90
Q0PA13
A
1
4
93
1
expression tag
SER
-2
4IYL
A
Q0PA13
UNP
1
1
expression tag
ASN
-1
4IYL
A
Q0PA13
UNP
2
1
expression tag
ALA
0
4IYL
A
Q0PA13
UNP
3
23
I 2 2 2