0.003656
0.000000
0.000000
0.000000
0.003656
0.000000
0.000000
0.000000
0.003656
0.00000
0.00000
0.00000
Paetzel, M.
Chung, I.Y.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
96
90.00
90.00
90.00
273.520
273.520
273.520
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C2 H6 O S
78.133
BETA-MERCAPTOETHANOL
non-polymer
C3 H7 N O3 S
137.158
n
S-HYDROXYCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
C
N
76
N
O
N
77
N
S
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
R
C
N
86
N
C
N
87
N
S
N
88
N
C
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
N
N
100
R
C
N
101
N
C
N
102
N
O
N
103
N
C
N
104
N
S
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
S
C
N
115
N
C
N
116
N
O
N
117
N
C
N
118
N
C
N
119
N
C
N
120
N
O
N
121
N
N
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
Y
167
N
C
Y
168
N
N
Y
169
N
C
Y
170
N
C
Y
171
N
N
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
S
C
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
N
N
209
S
C
N
210
N
C
N
211
N
O
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
N
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
C
N
261
N
S
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
MG
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
R
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
N
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
C
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
doub
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
Y
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
Y
271
N
doub
Y
272
N
sing
Y
273
N
sing
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
doub
N
278
N
sing
Y
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
doub
Y
345
N
sing
Y
346
N
sing
N
347
N
sing
Y
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
288
13068
13081
10.1074/jbc.M112.386953
23511637
Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
2013
10.2210/pdb4izk/pdb
pdb_00004izk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
DCM WITH CRYO-COOLED. 1ST CRYSTAL SAGITTALLY BENT. 2ND CRYSTAL FOLLOWED BY VERTICALLY FOCUSING MIRROR.
CCD
2010-07-28
MARMOSAIC 225 mm CCD
A DOUBLE CRYSTAL MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
08ID-1
CLSI
0.9795
SYNCHROTRON
CLSI BEAMLINE 08ID-1
22269.332
Yellowtail Ascites Virus (YAV) VP4 protease
3.4.21.115
K674A
1
man
polymer
22253.332
Yellowtail Ascites Virus (YAV) VP4 protease
3.4.21.115
K674A
1
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
78.133
BETA-MERCAPTOETHANOL
1
syn
non-polymer
18.015
water
320
nat
water
no
yes
MASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDT
GCVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIV
PI(CSO)GVDIAAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
MASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDT
GCVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIV
PICGVDIAAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
A
polypeptide(L)
no
no
MASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDT
GCVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIV
PICGVDIAAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
MASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDT
GCVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIV
PICGVDIAAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Y-6
sample
VIRAL PROTEIN 4 (VP4)
360000
Yellowtail ascites virus
469008
Escherichia coli
TUNER (DE3)
PLASMID
PET28B+
Y-6
sample
VIRAL PROTEIN 4 (VP4)
360000
Yellowtail ascites virus
469008
Escherichia coli
TUNER (DE3)
PLASMID
PET28B+
1
4.79
74.31
VAPOR DIFFUSION, SITTING DROP
6.5
25% PEG 2000, 0.1 M MES, 0.45 M MAGNESIUM CHLORIDE, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 296K
296
pdbx_unobs_or_zero_occ_atoms
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Database references
Database references
Advisory
Refinement description
Advisory
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2013-02-27
1
1
2013-04-03
1
2
2013-05-22
1
3
2017-11-15
1
4
2023-09-20
1
5
2023-12-06
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
2013-02-27
SPRSDE
Crystal Structure of VP4 protease from blotched snakehead virus (BSNV)
Crystal structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P1
Crystal Structure of VP4 protease from infectious pancreatic necrosis virus (IPNV) in space group P6122
Crystal structure of VP4 protease from Tellina virus 1 (TV-1)
RCSB
Y
RCSB
2013-01-30
REL
REL
MG
MAGNESIUM ION
BME
BETA-MERCAPTOETHANOL
HOH
water
4IZJ
PDB entry 4IZJ
PDB
experimental model
MG
801
3
MG
MG
801
A
BME
801
4
BME
BME
801
B
MG
802
3
MG
MG
802
B
HOH
901
5
HOH
HOH
901
A
HOH
902
5
HOH
HOH
902
A
HOH
903
5
HOH
HOH
903
A
HOH
904
5
HOH
HOH
904
A
HOH
905
5
HOH
HOH
905
A
HOH
906
5
HOH
HOH
906
A
HOH
907
5
HOH
HOH
907
A
HOH
908
5
HOH
HOH
908
A
HOH
909
5
HOH
HOH
909
A
HOH
910
5
HOH
HOH
910
A
HOH
911
5
HOH
HOH
911
A
HOH
912
5
HOH
HOH
912
A
HOH
913
5
HOH
HOH
913
A
HOH
914
5
HOH
HOH
914
A
HOH
915
5
HOH
HOH
915
A
HOH
916
5
HOH
HOH
916
A
HOH
917
5
HOH
HOH
917
A
HOH
918
5
HOH
HOH
918
A
HOH
919
5
HOH
HOH
919
A
HOH
920
5
HOH
HOH
920
A
HOH
921
5
HOH
HOH
921
A
HOH
922
5
HOH
HOH
922
A
HOH
924
5
HOH
HOH
923
A
HOH
925
5
HOH
HOH
924
A
HOH
926
5
HOH
HOH
925
A
HOH
927
5
HOH
HOH
926
A
HOH
928
5
HOH
HOH
927
A
HOH
929
5
HOH
HOH
928
A
HOH
930
5
HOH
HOH
929
A
HOH
931
5
HOH
HOH
930
A
HOH
932
5
HOH
HOH
931
A
HOH
933
5
HOH
HOH
932
A
HOH
935
5
HOH
HOH
933
A
HOH
936
5
HOH
HOH
934
A
HOH
938
5
HOH
HOH
935
A
HOH
939
5
HOH
HOH
936
A
HOH
940
5
HOH
HOH
937
A
HOH
941
5
HOH
HOH
938
A
HOH
942
5
HOH
HOH
939
A
HOH
943
5
HOH
HOH
940
A
HOH
944
5
HOH
HOH
941
A
HOH
945
5
HOH
HOH
942
A
HOH
946
5
HOH
HOH
943
A
HOH
947
5
HOH
HOH
944
A
HOH
948
5
HOH
HOH
945
A
HOH
949
5
HOH
HOH
946
A
HOH
950
5
HOH
HOH
947
A
HOH
951
5
HOH
HOH
948
A
HOH
952
5
HOH
HOH
949
A
HOH
953
5
HOH
HOH
950
A
HOH
954
5
HOH
HOH
951
A
HOH
955
5
HOH
HOH
952
A
HOH
956
5
HOH
HOH
953
A
HOH
957
5
HOH
HOH
954
A
HOH
958
5
HOH
HOH
955
A
HOH
959
5
HOH
HOH
956
A
HOH
960
5
HOH
HOH
957
A
HOH
961
5
HOH
HOH
958
A
HOH
962
5
HOH
HOH
959
A
HOH
963
5
HOH
HOH
960
A
HOH
964
5
HOH
HOH
961
A
HOH
965
5
HOH
HOH
962
A
HOH
966
5
HOH
HOH
963
A
HOH
967
5
HOH
HOH
964
A
HOH
968
5
HOH
HOH
965
A
HOH
969
5
HOH
HOH
966
A
HOH
970
5
HOH
HOH
967
A
HOH
971
5
HOH
HOH
968
A
HOH
973
5
HOH
HOH
969
A
HOH
974
5
HOH
HOH
970
A
HOH
975
5
HOH
HOH
971
A
HOH
976
5
HOH
HOH
972
A
HOH
977
5
HOH
HOH
973
A
HOH
978
5
HOH
HOH
974
A
HOH
979
5
HOH
HOH
975
A
HOH
980
5
HOH
HOH
976
A
HOH
981
5
HOH
HOH
977
A
HOH
982
5
HOH
HOH
978
A
HOH
984
5
HOH
HOH
979
A
HOH
985
5
HOH
HOH
980
A
HOH
986
5
HOH
HOH
981
A
HOH
987
5
HOH
HOH
982
A
HOH
988
5
HOH
HOH
983
A
HOH
989
5
HOH
HOH
984
A
HOH
990
5
HOH
HOH
985
A
HOH
992
5
HOH
HOH
986
A
HOH
993
5
HOH
HOH
987
A
HOH
994
5
HOH
HOH
988
A
HOH
995
5
HOH
HOH
989
A
HOH
996
5
HOH
HOH
990
A
HOH
999
5
HOH
HOH
991
A
HOH
1000
5
HOH
HOH
992
A
HOH
1001
5
HOH
HOH
993
A
HOH
1003
5
HOH
HOH
994
A
HOH
1004
5
HOH
HOH
995
A
HOH
1005
5
HOH
HOH
996
A
HOH
1006
5
HOH
HOH
997
A
HOH
1007
5
HOH
HOH
998
A
HOH
1008
5
HOH
HOH
999
A
HOH
1010
5
HOH
HOH
1000
A
HOH
1011
5
HOH
HOH
1001
A
HOH
1012
5
HOH
HOH
1002
A
HOH
1013
5
HOH
HOH
1003
A
HOH
1014
5
HOH
HOH
1004
A
HOH
1015
5
HOH
HOH
1005
A
HOH
1018
5
HOH
HOH
1006
A
HOH
1020
5
HOH
HOH
1007
A
HOH
1021
5
HOH
HOH
1008
A
HOH
1022
5
HOH
HOH
1009
A
HOH
1023
5
HOH
HOH
1010
A
HOH
1024
5
HOH
HOH
1011
A
HOH
1025
5
HOH
HOH
1012
A
HOH
1026
5
HOH
HOH
1013
A
HOH
1027
5
HOH
HOH
1014
A
HOH
1028
5
HOH
HOH
1015
A
HOH
1029
5
HOH
HOH
1016
A
HOH
1030
5
HOH
HOH
1017
A
HOH
1031
5
HOH
HOH
1018
A
HOH
1033
5
HOH
HOH
1019
A
HOH
1034
5
HOH
HOH
1020
A
HOH
1035
5
HOH
HOH
1021
A
HOH
1037
5
HOH
HOH
1022
A
HOH
1038
5
HOH
HOH
1023
A
HOH
1040
5
HOH
HOH
1024
A
HOH
1041
5
HOH
HOH
1025
A
HOH
1042
5
HOH
HOH
1026
A
HOH
1044
5
HOH
HOH
1027
A
HOH
1045
5
HOH
HOH
1028
A
HOH
1046
5
HOH
HOH
1029
A
HOH
1047
5
HOH
HOH
1030
A
HOH
1048
5
HOH
HOH
1031
A
HOH
1049
5
HOH
HOH
1032
A
HOH
1050
5
HOH
HOH
1033
A
HOH
1051
5
HOH
HOH
1034
A
HOH
1052
5
HOH
HOH
1035
A
HOH
1054
5
HOH
HOH
1036
A
HOH
1055
5
HOH
HOH
1037
A
HOH
1056
5
HOH
HOH
1038
A
HOH
1057
5
HOH
HOH
1039
A
HOH
1059
5
HOH
HOH
1040
A
HOH
1060
5
HOH
HOH
1041
A
HOH
1061
5
HOH
HOH
1042
A
HOH
1062
5
HOH
HOH
1043
A
HOH
901
5
HOH
HOH
1044
A
HOH
902
5
HOH
HOH
1045
A
HOH
972
5
HOH
HOH
901
B
HOH
903
5
HOH
HOH
902
B
HOH
904
5
HOH
HOH
903
B
HOH
905
5
HOH
HOH
904
B
HOH
906
5
HOH
HOH
905
B
HOH
907
5
HOH
HOH
906
B
HOH
908
5
HOH
HOH
907
B
HOH
909
5
HOH
HOH
908
B
HOH
910
5
HOH
HOH
909
B
HOH
911
5
HOH
HOH
910
B
HOH
912
5
HOH
HOH
911
B
HOH
913
5
HOH
HOH
912
B
HOH
914
5
HOH
HOH
913
B
HOH
915
5
HOH
HOH
914
B
HOH
916
5
HOH
HOH
915
B
HOH
917
5
HOH
HOH
916
B
HOH
918
5
HOH
HOH
917
B
HOH
919
5
HOH
HOH
918
B
HOH
920
5
HOH
HOH
919
B
HOH
921
5
HOH
HOH
920
B
HOH
922
5
HOH
HOH
921
B
HOH
923
5
HOH
HOH
922
B
HOH
924
5
HOH
HOH
923
B
HOH
925
5
HOH
HOH
924
B
HOH
926
5
HOH
HOH
925
B
HOH
927
5
HOH
HOH
926
B
HOH
928
5
HOH
HOH
927
B
HOH
929
5
HOH
HOH
928
B
HOH
931
5
HOH
HOH
929
B
HOH
932
5
HOH
HOH
930
B
HOH
933
5
HOH
HOH
931
B
HOH
934
5
HOH
HOH
932
B
HOH
935
5
HOH
HOH
933
B
HOH
936
5
HOH
HOH
934
B
HOH
937
5
HOH
HOH
935
B
HOH
938
5
HOH
HOH
936
B
HOH
939
5
HOH
HOH
937
B
HOH
940
5
HOH
HOH
938
B
HOH
941
5
HOH
HOH
939
B
HOH
942
5
HOH
HOH
940
B
HOH
943
5
HOH
HOH
941
B
HOH
944
5
HOH
HOH
942
B
HOH
945
5
HOH
HOH
943
B
HOH
946
5
HOH
HOH
944
B
HOH
947
5
HOH
HOH
945
B
HOH
948
5
HOH
HOH
946
B
HOH
949
5
HOH
HOH
947
B
HOH
950
5
HOH
HOH
948
B
HOH
951
5
HOH
HOH
949
B
HOH
952
5
HOH
HOH
950
B
HOH
953
5
HOH
HOH
951
B
HOH
954
5
HOH
HOH
952
B
HOH
955
5
HOH
HOH
953
B
HOH
956
5
HOH
HOH
954
B
HOH
957
5
HOH
HOH
955
B
HOH
958
5
HOH
HOH
956
B
HOH
959
5
HOH
HOH
957
B
HOH
960
5
HOH
HOH
958
B
HOH
961
5
HOH
HOH
959
B
HOH
962
5
HOH
HOH
960
B
HOH
963
5
HOH
HOH
961
B
HOH
964
5
HOH
HOH
962
B
HOH
965
5
HOH
HOH
963
B
HOH
966
5
HOH
HOH
964
B
HOH
967
5
HOH
HOH
965
B
HOH
968
5
HOH
HOH
966
B
HOH
969
5
HOH
HOH
967
B
HOH
970
5
HOH
HOH
968
B
HOH
971
5
HOH
HOH
969
B
HOH
972
5
HOH
HOH
970
B
HOH
975
5
HOH
HOH
971
B
HOH
976
5
HOH
HOH
972
B
HOH
977
5
HOH
HOH
973
B
HOH
978
5
HOH
HOH
974
B
HOH
979
5
HOH
HOH
975
B
HOH
980
5
HOH
HOH
976
B
HOH
981
5
HOH
HOH
977
B
HOH
982
5
HOH
HOH
978
B
HOH
983
5
HOH
HOH
979
B
HOH
984
5
HOH
HOH
980
B
HOH
985
5
HOH
HOH
981
B
HOH
986
5
HOH
HOH
982
B
HOH
987
5
HOH
HOH
983
B
HOH
988
5
HOH
HOH
984
B
HOH
989
5
HOH
HOH
985
B
HOH
990
5
HOH
HOH
986
B
HOH
991
5
HOH
HOH
987
B
HOH
992
5
HOH
HOH
988
B
HOH
993
5
HOH
HOH
989
B
HOH
994
5
HOH
HOH
990
B
HOH
995
5
HOH
HOH
991
B
HOH
996
5
HOH
HOH
992
B
HOH
998
5
HOH
HOH
993
B
HOH
999
5
HOH
HOH
994
B
HOH
1000
5
HOH
HOH
995
B
HOH
1001
5
HOH
HOH
996
B
HOH
1002
5
HOH
HOH
997
B
HOH
1003
5
HOH
HOH
998
B
HOH
1004
5
HOH
HOH
999
B
HOH
1005
5
HOH
HOH
1000
B
HOH
1006
5
HOH
HOH
1001
B
HOH
1007
5
HOH
HOH
1002
B
HOH
1010
5
HOH
HOH
1003
B
HOH
1011
5
HOH
HOH
1004
B
HOH
1012
5
HOH
HOH
1005
B
HOH
1013
5
HOH
HOH
1006
B
HOH
1014
5
HOH
HOH
1007
B
HOH
1015
5
HOH
HOH
1008
B
HOH
1017
5
HOH
HOH
1009
B
HOH
1018
5
HOH
HOH
1010
B
HOH
1019
5
HOH
HOH
1011
B
HOH
1020
5
HOH
HOH
1012
B
HOH
1021
5
HOH
HOH
1013
B
HOH
1022
5
HOH
HOH
1014
B
HOH
1023
5
HOH
HOH
1015
B
HOH
1024
5
HOH
HOH
1016
B
HOH
1025
5
HOH
HOH
1017
B
HOH
1026
5
HOH
HOH
1018
B
HOH
1028
5
HOH
HOH
1019
B
HOH
1029
5
HOH
HOH
1020
B
HOH
1030
5
HOH
HOH
1021
B
HOH
1031
5
HOH
HOH
1022
B
HOH
1032
5
HOH
HOH
1023
B
HOH
1033
5
HOH
HOH
1024
B
HOH
1034
5
HOH
HOH
1025
B
HOH
1035
5
HOH
HOH
1026
B
HOH
1036
5
HOH
HOH
1027
B
HOH
1037
5
HOH
HOH
1028
B
HOH
1038
5
HOH
HOH
1029
B
HOH
1039
5
HOH
HOH
1030
B
HOH
1040
5
HOH
HOH
1031
B
HOH
1041
5
HOH
HOH
1032
B
HOH
1042
5
HOH
HOH
1033
B
HOH
1043
5
HOH
HOH
1034
B
HOH
1045
5
HOH
HOH
1035
B
HOH
1046
5
HOH
HOH
1036
B
HOH
1048
5
HOH
HOH
1037
B
HOH
1049
5
HOH
HOH
1038
B
HOH
1050
5
HOH
HOH
1039
B
HOH
1051
5
HOH
HOH
1040
B
HOH
1052
5
HOH
HOH
1041
B
HOH
1054
5
HOH
HOH
1042
B
HOH
1055
5
HOH
HOH
1043
B
HOH
1056
5
HOH
HOH
1044
B
HOH
1057
5
HOH
HOH
1045
B
HOH
1058
5
HOH
HOH
1046
B
HOH
1060
5
HOH
HOH
1047
B
HOH
1061
5
HOH
HOH
1048
B
HOH
1062
5
HOH
HOH
1049
B
HOH
1063
5
HOH
HOH
1050
B
HOH
1064
5
HOH
HOH
1051
B
HOH
1065
5
HOH
HOH
1052
B
HOH
1066
5
HOH
HOH
1053
B
HOH
1067
5
HOH
HOH
1054
B
HOH
1068
5
HOH
HOH
1055
B
HOH
1069
5
HOH
HOH
1056
B
HOH
1070
5
HOH
HOH
1057
B
HOH
1071
5
HOH
HOH
1058
B
HOH
1072
5
HOH
HOH
1059
B
HOH
1073
5
HOH
HOH
1060
B
HOH
1074
5
HOH
HOH
1061
B
HOH
1076
5
HOH
HOH
1062
B
HOH
1078
5
HOH
HOH
1063
B
HOH
1080
5
HOH
HOH
1064
B
HOH
1081
5
HOH
HOH
1065
B
HOH
1083
5
HOH
HOH
1066
B
HOH
1084
5
HOH
HOH
1067
B
HOH
1085
5
HOH
HOH
1068
B
HOH
1086
5
HOH
HOH
1069
B
HOH
1087
5
HOH
HOH
1070
B
HOH
1088
5
HOH
HOH
1071
B
HOH
1089
5
HOH
HOH
1072
B
HOH
1090
5
HOH
HOH
1073
B
HOH
1091
5
HOH
HOH
1074
B
HOH
1092
5
HOH
HOH
1075
B
n
1
507
A
n
2
508
A
n
3
509
A
n
4
510
A
n
5
511
A
n
6
512
A
n
7
513
A
n
8
514
A
ARG
515
n
9
ARG
515
A
PHE
516
n
10
PHE
516
A
SER
517
n
11
SER
517
A
ARG
518
n
12
ARG
518
A
ASN
519
n
13
ASN
519
A
LEU
520
n
14
LEU
520
A
LYS
521
n
15
LYS
521
A
ASP
522
n
16
ASP
522
A
ARG
523
n
17
ARG
523
A
LEU
524
n
18
LEU
524
A
GLU
525
n
19
GLU
525
A
SER
526
n
20
SER
526
A
ASN
527
n
21
ASN
527
A
ASN
528
n
22
ASN
528
A
TYR
529
n
23
TYR
529
A
GLU
530
n
24
GLU
530
A
GLU
531
n
25
GLU
531
A
MET
532
n
26
MET
532
A
GLU
533
n
27
GLU
533
A
LEU
534
n
28
LEU
534
A
PRO
535
n
29
PRO
535
A
PRO
536
n
30
PRO
536
A
PRO
537
n
31
PRO
537
A
THR
538
n
32
THR
538
A
LYS
539
n
33
LYS
539
A
GLY
540
n
34
GLY
540
A
VAL
541
n
35
VAL
541
A
ILE
542
n
36
ILE
542
A
ILE
543
n
37
ILE
543
A
PRO
544
n
38
PRO
544
A
VAL
545
n
39
VAL
545
A
VAL
546
n
40
VAL
546
A
HIS
547
n
41
HIS
547
A
THR
548
n
42
THR
548
A
VAL
549
n
43
VAL
549
A
GLU
550
n
44
GLU
550
A
SER
551
n
45
SER
551
A
ALA
552
n
46
ALA
552
A
PRO
553
n
47
PRO
553
A
GLY
554
n
48
GLY
554
A
GLU
555
n
49
GLU
555
A
ALA
556
n
50
ALA
556
A
PHE
557
n
51
PHE
557
A
GLY
558
n
52
GLY
558
A
SER
559
n
53
SER
559
A
LEU
560
n
54
LEU
560
A
LEU
561
n
55
LEU
561
A
VAL
562
n
56
VAL
562
A
ILE
563
n
57
ILE
563
A
ILE
564
n
58
ILE
564
A
PRO
565
n
59
PRO
565
A
GLY
566
n
60
GLY
566
A
ALA
567
n
61
ALA
567
A
TYR
568
n
62
TYR
568
A
PRO
569
n
63
PRO
569
A
GLU
570
n
64
GLU
570
A
LEU
571
n
65
LEU
571
A
LEU
572
n
66
LEU
572
A
ASP
573
n
67
ASP
573
A
PRO
574
n
68
PRO
574
A
ASN
575
n
69
ASN
575
A
GLN
576
n
70
GLN
576
A
GLN
577
n
71
GLN
577
A
VAL
578
n
72
VAL
578
A
LEU
579
n
73
LEU
579
A
SER
580
n
74
SER
580
A
HIS
581
n
75
HIS
581
A
PHE
582
n
76
PHE
582
A
LYS
583
n
77
LYS
583
A
ASN
584
n
78
ASN
584
A
ASP
585
n
79
ASP
585
A
THR
586
n
80
THR
586
A
GLY
587
n
81
GLY
587
A
CYS
588
n
82
CYS
588
A
VAL
589
n
83
VAL
589
A
TRP
590
n
84
TRP
590
A
GLY
591
n
85
GLY
591
A
ILE
592
n
86
ILE
592
A
GLY
593
n
87
GLY
593
A
GLU
594
n
88
GLU
594
A
ASP
595
n
89
ASP
595
A
ILE
596
n
90
ILE
596
A
PRO
597
n
91
PRO
597
A
PHE
598
n
92
PHE
598
A
GLU
599
n
93
GLU
599
A
GLY
600
n
94
GLY
600
A
ASP
601
n
95
ASP
601
A
ASP
602
n
96
ASP
602
A
ILE
603
n
97
ILE
603
A
CYS
604
n
98
CYS
604
A
TYR
605
n
99
TYR
605
A
THR
606
n
100
THR
606
A
ALA
607
n
101
ALA
607
A
LEU
608
n
102
LEU
608
A
PRO
609
n
103
PRO
609
A
LEU
610
n
104
LEU
610
A
LYS
611
n
105
LYS
611
A
GLU
612
n
106
GLU
612
A
ILE
613
n
107
ILE
613
A
LYS
614
n
108
LYS
614
A
LYS
615
n
109
LYS
615
A
ASN
616
n
110
ASN
616
A
GLY
617
n
111
GLY
617
A
ASN
618
n
112
ASN
618
A
ILE
619
n
113
ILE
619
A
VAL
620
n
114
VAL
620
A
VAL
621
n
115
VAL
621
A
GLU
622
n
116
GLU
622
A
LYS
623
n
117
LYS
623
A
VAL
624
n
118
VAL
624
A
PHE
625
n
119
PHE
625
A
ALA
626
n
120
ALA
626
A
GLY
627
n
121
GLY
627
A
PRO
628
n
122
PRO
628
A
ALA
629
n
123
ALA
629
A
MET
630
n
124
MET
630
A
GLY
631
n
125
GLY
631
A
PRO
632
n
126
PRO
632
A
SER
633
n
127
SER
633
A
CYS
634
n
128
CYS
634
A
GLN
635
n
129
GLN
635
A
LEU
636
n
130
LEU
636
A
GLY
637
n
131
GLY
637
A
LEU
638
n
132
LEU
638
A
SER
639
n
133
SER
639
A
LEU
640
n
134
LEU
640
A
LEU
641
n
135
LEU
641
A
VAL
642
n
136
VAL
642
A
ASN
643
n
137
ASN
643
A
ASP
644
n
138
ASP
644
A
ILE
645
n
139
ILE
645
A
ASP
646
n
140
ASP
646
A
LYS
647
n
141
LYS
647
A
GLY
648
n
142
GLY
648
A
VAL
649
n
143
VAL
649
A
PRO
650
n
144
PRO
650
A
ARG
651
n
145
ARG
651
A
MET
652
n
146
MET
652
A
VAL
653
n
147
VAL
653
A
PHE
654
n
148
PHE
654
A
THR
655
n
149
THR
655
A
GLY
656
n
150
GLY
656
A
GLU
657
n
151
GLU
657
A
ILE
658
n
152
ILE
658
A
ALA
659
n
153
ALA
659
A
ASN
660
n
154
ASN
660
A
ASP
661
n
155
ASP
661
A
GLU
662
n
156
GLU
662
A
GLU
663
n
157
GLU
663
A
THR
664
n
158
THR
664
A
ILE
665
n
159
ILE
665
A
VAL
666
n
160
VAL
666
A
PRO
667
n
161
PRO
667
A
ILE
668
n
162
ILE
668
A
CSO
669
n
163
CSO
669
A
GLY
670
n
164
GLY
670
A
VAL
671
n
165
VAL
671
A
ASP
672
n
166
ASP
672
A
ILE
673
n
167
ILE
673
A
ALA
674
n
168
ALA
674
A
ALA
675
n
169
ALA
675
A
ILE
676
n
170
ILE
676
A
ALA
677
n
171
ALA
677
A
ALA
678
n
172
ALA
678
A
HIS
679
n
173
HIS
679
A
GLU
680
n
174
GLU
680
A
HIS
681
n
175
HIS
681
A
GLY
682
n
176
GLY
682
A
LEU
683
n
177
LEU
683
A
PRO
684
n
178
PRO
684
A
LEU
685
n
179
LEU
685
A
VAL
686
n
180
VAL
686
A
GLY
687
n
181
GLY
687
A
CYS
688
n
182
CYS
688
A
GLN
689
n
183
GLN
689
A
PRO
690
n
184
PRO
690
A
GLY
691
n
185
GLY
691
A
VAL
692
n
186
VAL
692
A
ASP
693
n
187
ASP
693
A
GLU
694
n
188
GLU
694
A
VAL
695
n
189
VAL
695
A
VAL
696
n
190
VAL
696
A
ALA
697
n
191
ALA
697
A
ASN
698
n
192
ASN
698
A
THR
699
n
193
THR
699
A
SER
700
n
194
SER
700
A
LEU
701
n
195
LEU
701
A
ALA
702
n
196
ALA
702
A
SER
703
n
197
SER
703
A
HIS
704
n
198
HIS
704
A
LEU
705
n
199
LEU
705
A
ILE
706
n
200
ILE
706
A
GLN
707
n
201
GLN
707
A
SER
708
n
202
SER
708
A
GLY
709
n
203
GLY
709
A
ALA
710
n
204
ALA
710
A
LEU
711
n
205
LEU
711
A
PRO
712
n
206
PRO
712
A
VAL
713
n
207
VAL
713
A
GLN
714
n
208
GLN
714
A
LYS
715
n
209
LYS
715
A
ALA
716
n
210
ALA
716
A
n
1
507
B
n
2
508
B
n
3
509
B
n
4
510
B
n
5
511
B
n
6
512
B
n
7
513
B
GLY
514
n
8
GLY
514
B
ARG
515
n
9
ARG
515
B
PHE
516
n
10
PHE
516
B
SER
517
n
11
SER
517
B
ARG
518
n
12
ARG
518
B
ASN
519
n
13
ASN
519
B
LEU
520
n
14
LEU
520
B
LYS
521
n
15
LYS
521
B
ASP
522
n
16
ASP
522
B
ARG
523
n
17
ARG
523
B
LEU
524
n
18
LEU
524
B
GLU
525
n
19
GLU
525
B
SER
526
n
20
SER
526
B
ASN
527
n
21
ASN
527
B
ASN
528
n
22
ASN
528
B
TYR
529
n
23
TYR
529
B
GLU
530
n
24
GLU
530
B
GLU
531
n
25
GLU
531
B
MET
532
n
26
MET
532
B
GLU
533
n
27
GLU
533
B
LEU
534
n
28
LEU
534
B
PRO
535
n
29
PRO
535
B
PRO
536
n
30
PRO
536
B
PRO
537
n
31
PRO
537
B
THR
538
n
32
THR
538
B
LYS
539
n
33
LYS
539
B
GLY
540
n
34
GLY
540
B
VAL
541
n
35
VAL
541
B
ILE
542
n
36
ILE
542
B
ILE
543
n
37
ILE
543
B
PRO
544
n
38
PRO
544
B
VAL
545
n
39
VAL
545
B
VAL
546
n
40
VAL
546
B
HIS
547
n
41
HIS
547
B
THR
548
n
42
THR
548
B
VAL
549
n
43
VAL
549
B
GLU
550
n
44
GLU
550
B
SER
551
n
45
SER
551
B
ALA
552
n
46
ALA
552
B
PRO
553
n
47
PRO
553
B
GLY
554
n
48
GLY
554
B
GLU
555
n
49
GLU
555
B
ALA
556
n
50
ALA
556
B
PHE
557
n
51
PHE
557
B
GLY
558
n
52
GLY
558
B
SER
559
n
53
SER
559
B
LEU
560
n
54
LEU
560
B
LEU
561
n
55
LEU
561
B
VAL
562
n
56
VAL
562
B
ILE
563
n
57
ILE
563
B
ILE
564
n
58
ILE
564
B
PRO
565
n
59
PRO
565
B
GLY
566
n
60
GLY
566
B
ALA
567
n
61
ALA
567
B
TYR
568
n
62
TYR
568
B
PRO
569
n
63
PRO
569
B
GLU
570
n
64
GLU
570
B
LEU
571
n
65
LEU
571
B
LEU
572
n
66
LEU
572
B
ASP
573
n
67
ASP
573
B
PRO
574
n
68
PRO
574
B
ASN
575
n
69
ASN
575
B
GLN
576
n
70
GLN
576
B
GLN
577
n
71
GLN
577
B
VAL
578
n
72
VAL
578
B
LEU
579
n
73
LEU
579
B
SER
580
n
74
SER
580
B
HIS
581
n
75
HIS
581
B
PHE
582
n
76
PHE
582
B
LYS
583
n
77
LYS
583
B
ASN
584
n
78
ASN
584
B
ASP
585
n
79
ASP
585
B
THR
586
n
80
THR
586
B
GLY
587
n
81
GLY
587
B
CYS
588
n
82
CYS
588
B
VAL
589
n
83
VAL
589
B
TRP
590
n
84
TRP
590
B
GLY
591
n
85
GLY
591
B
ILE
592
n
86
ILE
592
B
GLY
593
n
87
GLY
593
B
GLU
594
n
88
GLU
594
B
ASP
595
n
89
ASP
595
B
ILE
596
n
90
ILE
596
B
PRO
597
n
91
PRO
597
B
PHE
598
n
92
PHE
598
B
GLU
599
n
93
GLU
599
B
GLY
600
n
94
GLY
600
B
ASP
601
n
95
ASP
601
B
ASP
602
n
96
ASP
602
B
ILE
603
n
97
ILE
603
B
CYS
604
n
98
CYS
604
B
TYR
605
n
99
TYR
605
B
THR
606
n
100
THR
606
B
ALA
607
n
101
ALA
607
B
LEU
608
n
102
LEU
608
B
PRO
609
n
103
PRO
609
B
LEU
610
n
104
LEU
610
B
LYS
611
n
105
LYS
611
B
GLU
612
n
106
GLU
612
B
ILE
613
n
107
ILE
613
B
LYS
614
n
108
LYS
614
B
LYS
615
n
109
LYS
615
B
ASN
616
n
110
ASN
616
B
GLY
617
n
111
GLY
617
B
ASN
618
n
112
ASN
618
B
ILE
619
n
113
ILE
619
B
VAL
620
n
114
VAL
620
B
VAL
621
n
115
VAL
621
B
GLU
622
n
116
GLU
622
B
LYS
623
n
117
LYS
623
B
VAL
624
n
118
VAL
624
B
PHE
625
n
119
PHE
625
B
ALA
626
n
120
ALA
626
B
GLY
627
n
121
GLY
627
B
PRO
628
n
122
PRO
628
B
ALA
629
n
123
ALA
629
B
MET
630
n
124
MET
630
B
GLY
631
n
125
GLY
631
B
PRO
632
n
126
PRO
632
B
SER
633
n
127
SER
633
B
CYS
634
n
128
CYS
634
B
GLN
635
n
129
GLN
635
B
LEU
636
n
130
LEU
636
B
GLY
637
n
131
GLY
637
B
LEU
638
n
132
LEU
638
B
SER
639
n
133
SER
639
B
LEU
640
n
134
LEU
640
B
LEU
641
n
135
LEU
641
B
VAL
642
n
136
VAL
642
B
ASN
643
n
137
ASN
643
B
ASP
644
n
138
ASP
644
B
ILE
645
n
139
ILE
645
B
ASP
646
n
140
ASP
646
B
LYS
647
n
141
LYS
647
B
GLY
648
n
142
GLY
648
B
VAL
649
n
143
VAL
649
B
PRO
650
n
144
PRO
650
B
ARG
651
n
145
ARG
651
B
MET
652
n
146
MET
652
B
VAL
653
n
147
VAL
653
B
PHE
654
n
148
PHE
654
B
THR
655
n
149
THR
655
B
GLY
656
n
150
GLY
656
B
GLU
657
n
151
GLU
657
B
ILE
658
n
152
ILE
658
B
ALA
659
n
153
ALA
659
B
ASN
660
n
154
ASN
660
B
ASP
661
n
155
ASP
661
B
GLU
662
n
156
GLU
662
B
GLU
663
n
157
GLU
663
B
THR
664
n
158
THR
664
B
ILE
665
n
159
ILE
665
B
VAL
666
n
160
VAL
666
B
PRO
667
n
161
PRO
667
B
ILE
668
n
162
ILE
668
B
CYS
669
n
163
CYS
669
B
GLY
670
n
164
GLY
670
B
VAL
671
n
165
VAL
671
B
ASP
672
n
166
ASP
672
B
ILE
673
n
167
ILE
673
B
ALA
674
n
168
ALA
674
B
ALA
675
n
169
ALA
675
B
ILE
676
n
170
ILE
676
B
ALA
677
n
171
ALA
677
B
ALA
678
n
172
ALA
678
B
HIS
679
n
173
HIS
679
B
GLU
680
n
174
GLU
680
B
HIS
681
n
175
HIS
681
B
GLY
682
n
176
GLY
682
B
LEU
683
n
177
LEU
683
B
PRO
684
n
178
PRO
684
B
LEU
685
n
179
LEU
685
B
VAL
686
n
180
VAL
686
B
GLY
687
n
181
GLY
687
B
CYS
688
n
182
CYS
688
B
GLN
689
n
183
GLN
689
B
PRO
690
n
184
PRO
690
B
GLY
691
n
185
GLY
691
B
VAL
692
n
186
VAL
692
B
ASP
693
n
187
ASP
693
B
GLU
694
n
188
GLU
694
B
VAL
695
n
189
VAL
695
B
VAL
696
n
190
VAL
696
B
ALA
697
n
191
ALA
697
B
ASN
698
n
192
ASN
698
B
THR
699
n
193
THR
699
B
SER
700
n
194
SER
700
B
LEU
701
n
195
LEU
701
B
ALA
702
n
196
ALA
702
B
SER
703
n
197
SER
703
B
HIS
704
n
198
HIS
704
B
LEU
705
n
199
LEU
705
B
ILE
706
n
200
ILE
706
B
GLN
707
n
201
GLN
707
B
SER
708
n
202
SER
708
B
GLY
709
n
203
GLY
709
B
ALA
710
n
204
ALA
710
B
LEU
711
n
205
LEU
711
B
PRO
712
n
206
PRO
712
B
VAL
713
n
207
VAL
713
B
GLN
714
n
208
GLN
714
B
LYS
715
n
209
LYS
715
B
ALA
716
n
210
ALA
716
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
B
HOH
1037
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1038
G
O
HOH
1_555
172.9
B
HOH
1037
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1039
G
O
HOH
1_555
77.4
B
HOH
1038
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1039
G
O
HOH
1_555
101.4
B
HOH
1037
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1040
G
O
HOH
1_555
80.9
B
HOH
1038
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1040
G
O
HOH
1_555
97.6
B
HOH
1039
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1040
G
O
HOH
1_555
150.5
B
HOH
1037
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1073
G
O
HOH
1_555
84.2
B
HOH
1038
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1073
G
O
HOH
1_555
88.7
B
HOH
1039
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1073
G
O
HOH
1_555
84.0
B
HOH
1040
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1073
G
O
HOH
1_555
74.0
B
HOH
1037
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
122.8
B
HOH
1038
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
64.1
B
HOH
1039
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
92.8
B
HOH
1040
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
115.8
B
HOH
1073
G
O
HOH
1_555
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
151.6
A
CSO
669
S-HYDROXYCYSTEINE
A
CSO
163
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
534
A
N
LEU
28
A
O
ILE
619
A
O
ILE
113
A
O
VAL
620
A
O
VAL
114
A
N
GLU
612
A
N
GLU
106
A
O
LEU
608
A
O
LEU
102
A
N
VAL
562
A
N
VAL
56
A
O
LEU
561
A
O
LEU
55
A
N
ILE
543
A
N
ILE
37
A
N
LEU
534
A
N
LEU
28
A
O
ILE
619
A
O
ILE
113
A
O
VAL
620
A
O
VAL
114
A
N
GLU
612
A
N
GLU
106
A
O
ALA
607
A
O
ALA
101
A
N
TRP
590
A
N
TRP
84
A
O
VAL
589
A
O
VAL
83
A
N
SER
580
A
N
SER
74
A
N
VAL
653
A
N
VAL
147
A
O
VAL
686
A
O
VAL
180
A
O
LEU
685
A
O
LEU
179
A
N
GLU
694
A
N
GLU
188
A
N
GLU
657
A
N
GLU
151
A
O
VAL
666
A
O
VAL
160
B
N
ARG
515
B
N
ARG
9
B
O
ALA
556
B
O
ALA
50
B
N
VAL
562
B
N
VAL
56
B
O
LEU
608
B
O
LEU
102
B
O
ALA
607
B
O
ALA
101
B
N
TRP
590
B
N
TRP
84
B
O
VAL
589
B
O
VAL
83
B
N
SER
580
B
N
SER
74
B
N
LEU
534
B
N
LEU
28
B
O
ILE
619
B
O
ILE
113
B
O
VAL
620
B
O
VAL
114
B
N
GLU
612
B
N
GLU
106
B
O
LEU
608
B
O
LEU
102
B
N
VAL
562
B
N
VAL
56
B
O
PHE
557
B
O
PHE
51
B
N
HIS
547
B
N
HIS
41
B
O
VAL
546
B
O
VAL
40
A
N
LYS
715
A
N
LYS
209
A
N
GLN
714
A
N
GLN
208
B
O
MET
630
B
O
MET
124
B
N
VAL
653
B
N
VAL
147
B
O
VAL
686
B
O
VAL
180
B
N
GLY
687
B
N
GLY
181
B
O
GLU
694
B
O
GLU
188
B
N
GLU
657
B
N
GLU
151
B
O
VAL
666
B
O
VAL
160
1
A
HOH
930
F
HOH
1
A
CG
GLU
530
A
CG
GLU
24
0
Y
1
A
CD
GLU
530
A
CD
GLU
24
0
Y
1
A
OE1
GLU
530
A
OE1
GLU
24
0
Y
1
A
OE2
GLU
530
A
OE2
GLU
24
0
Y
1
A
CB
LYS
615
A
CB
LYS
109
0
Y
1
A
CG
LYS
615
A
CG
LYS
109
0
Y
1
A
CD
LYS
615
A
CD
LYS
109
0
Y
1
A
CE
LYS
615
A
CE
LYS
109
0
Y
1
A
NZ
LYS
615
A
NZ
LYS
109
0
Y
1
B
CG
ARG
515
B
CG
ARG
9
0
Y
1
B
CD
ARG
515
B
CD
ARG
9
0
Y
1
B
NE
ARG
515
B
NE
ARG
9
0
Y
1
B
CZ
ARG
515
B
CZ
ARG
9
0
Y
1
B
NH1
ARG
515
B
NH1
ARG
9
0
Y
1
B
NH2
ARG
515
B
NH2
ARG
9
0
Y
1
B
CG
LYS
615
B
CG
LYS
109
0
Y
1
B
CD
LYS
615
B
CD
LYS
109
0
Y
1
B
CE
LYS
615
B
CE
LYS
109
0
Y
1
B
NZ
LYS
615
B
NZ
LYS
109
0
Y
1
A
MET
507
A
MET
1
1
Y
1
A
ALA
508
A
ALA
2
1
Y
1
A
SER
509
A
SER
3
1
Y
1
A
GLY
510
A
GLY
4
1
Y
1
A
THR
511
A
THR
5
1
Y
1
A
ASP
512
A
ASP
6
1
Y
1
A
THR
513
A
THR
7
1
Y
1
A
GLY
514
A
GLY
8
1
Y
1
B
MET
507
B
MET
1
1
Y
1
B
ALA
508
B
ALA
2
1
Y
1
B
SER
509
B
SER
3
1
Y
1
B
GLY
510
B
GLY
4
1
Y
1
B
THR
511
B
THR
5
1
Y
1
B
ASP
512
B
ASP
6
1
Y
1
B
THR
513
B
THR
7
1
Y
1
B
B
SG
S2
CYS
BME
669
801
2.00
1
A
GLU
663
-138.00
-37.41
35.166
0.958
0.949
HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT
0.19685
0.17269
0.17394
2.30
55.80
1978
39388
39388
5.0
100
3.450
0.085
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.151
0.138
0.80
0.80
1.20
PDB entry 4IZJ
MAXIMUM LIKELIHOOD
MASK
2.30
55.80
320
3352
6
0
3026
0.012
0.019
3083
1.428
1.990
4212
7.018
5.000
405
38.973
26.393
122
15.736
15.000
485
15.075
15.000
7
0.121
0.200
491
0.017
0.022
2347
0.246
0.210
2.4
123
2474
5637
20
100.00
36.3
2.3
55.8
4IZK
39388
39388
0
0
0.105
1
13.8
8.7
100
0.249
2.3
2.4
6.5
5637
1
8.1
100
data collection
MxDC
phasing
PHASER
refinement
REFMAC
5.6.0117
data reduction
MOSFLM
data scaling
SCALA
Crystal structure of yellowtail ascites virus VP4 protease active site mutant (K674A) reveals both an acyl-enzyme complex and an empty active site
1
N
N
2
N
N
3
N
N
4
N
N
3
N
N
5
N
N
5
N
N
AUTHORS STATE THAT THE BIOLOGICAL ASSEMBLY IS UNKNOWN.
A
SER
517
A
SER
11
HELX_P
A
LEU
524
A
LEU
18
1
1
8
A
TYR
568
A
TYR
62
HELX_P
A
LEU
572
A
LEU
66
5
2
5
A
ASP
573
A
ASP
67
HELX_P
A
GLN
577
A
GLN
71
5
3
5
A
CYS
634
A
CYS
128
HELX_P
A
ASP
644
A
ASP
138
1
4
11
A
GLY
670
A
GLY
164
HELX_P
A
HIS
681
A
HIS
175
1
5
12
A
ASN
698
A
ASN
192
HELX_P
A
GLY
709
A
GLY
203
1
6
12
B
SER
517
B
SER
11
HELX_P
B
SER
526
B
SER
20
1
7
10
B
TYR
568
B
TYR
62
HELX_P
B
LEU
572
B
LEU
66
5
8
5
B
ASP
573
B
ASP
67
HELX_P
B
GLN
577
B
GLN
71
5
9
5
B
CYS
634
B
CYS
128
HELX_P
B
ASP
644
B
ASP
138
1
10
11
B
GLY
670
B
GLY
164
HELX_P
B
HIS
681
B
HIS
175
1
11
12
B
ASN
698
B
ASN
192
HELX_P
B
GLY
709
B
GLY
203
1
12
12
disulf
2.078
A
CYS
588
A
SG
CYS
82
1_555
A
CYS
604
A
SG
CYS
98
1_555
disulf
2.122
B
CYS
588
B
SG
CYS
82
1_555
B
CYS
604
B
SG
CYS
98
1_555
covale
1.336
both
A
ILE
668
A
C
ILE
162
1_555
A
CSO
669
A
N
CSO
163
1_555
covale
1.329
both
A
CSO
669
A
C
CSO
163
1_555
A
GLY
670
A
N
GLY
164
1_555
covale
1.377
one
A
ALA
716
A
C
ALA
210
1_555
B
SER
633
B
OG
SER
127
1_555
metalc
2.172
B
MG
802
E
MG
MG
1_555
B
HOH
1037
G
O
HOH
1_555
metalc
2.141
B
MG
802
E
MG
MG
1_555
B
HOH
1038
G
O
HOH
1_555
metalc
2.198
B
MG
802
E
MG
MG
1_555
B
HOH
1039
G
O
HOH
1_555
metalc
2.160
B
MG
802
E
MG
MG
1_555
B
HOH
1040
G
O
HOH
1_555
metalc
2.017
B
MG
802
E
MG
MG
1_555
B
HOH
1073
G
O
HOH
1_555
metalc
2.719
B
MG
802
E
MG
MG
1_555
B
HOH
1074
G
O
HOH
1_555
HYDROLASE
VIRAL PROTEASE, BIRNAVIRUS, SERINE-LYSINE DYAD MECHANISM, ALPHA-BETA PROTEIN FOLD, LYSINE GENERAL BASE, ACYL-ENZYME, PRODUCT COMPLEX, HYDROLASE
P89521_9VIRU
UNP
1
508
P89521
ASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDTG
CVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIVP
ICGVDIKAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
P89521_9VIRU
UNP
2
508
P89521
ASGTDTGRFSRNLKDRLESNNYEEMELPPPTKGVIIPVVHTVESAPGEAFGSLLVIIPGAYPELLDPNQQVLSHFKNDTG
CVWGIGEDIPFEGDDICYTALPLKEIKKNGNIVVEKVFAGPAMGPSCQLGLSLLVNDIDKGVPRMVFTGEIANDEETIVP
ICGVDIKAIAAHEHGLPLVGCQPGVDEVVANTSLASHLIQSGALPVQKA
508
716
4IZK
508
716
P89521
A
1
2
210
508
716
4IZK
508
716
P89521
B
2
2
210
1
initiating methionine
MET
507
4IZK
A
P89521
UNP
1
1
LYS
engineered mutation
ALA
674
4IZK
A
P89521
UNP
674
168
2
initiating methionine
MET
507
4IZK
B
P89521
UNP
1
2
LYS
engineered mutation
ALA
674
4IZK
B
P89521
UNP
674
168
5
5
3
2
5
7
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
A
ASN
528
A
ASN
22
A
LEU
534
A
LEU
28
A
ILE
619
A
ILE
113
A
VAL
624
A
VAL
118
A
ILE
603
A
ILE
97
A
ILE
613
A
ILE
107
A
ALA
556
A
ALA
50
A
PRO
565
A
PRO
59
A
VAL
541
A
VAL
35
A
THR
548
A
THR
42
A
ASN
528
A
ASN
22
A
LEU
534
A
LEU
28
A
ILE
619
A
ILE
113
A
VAL
624
A
VAL
118
A
ILE
603
A
ILE
97
A
ILE
613
A
ILE
107
A
GLY
587
A
GLY
81
A
TRP
590
A
TRP
84
A
LEU
579
A
LEU
73
A
HIS
581
A
HIS
75
A
VAL
653
A
VAL
147
A
PHE
654
A
PHE
148
A
LEU
685
A
LEU
179
A
GLY
687
A
GLY
181
A
GLU
694
A
GLU
188
A
VAL
695
A
VAL
189
A
GLU
657
A
GLU
151
A
ILE
658
A
ILE
152
A
ILE
665
A
ILE
159
A
VAL
666
A
VAL
160
B
ARG
515
B
ARG
9
B
PHE
516
B
PHE
10
B
GLU
555
B
GLU
49
B
PRO
565
B
PRO
59
B
ILE
603
B
ILE
97
B
ILE
613
B
ILE
107
B
GLY
587
B
GLY
81
B
TRP
590
B
TRP
84
B
LEU
579
B
LEU
73
B
HIS
581
B
HIS
75
B
TYR
529
B
TYR
23
B
LEU
534
B
LEU
28
B
ILE
619
B
ILE
113
B
LYS
623
B
LYS
117
B
ILE
603
B
ILE
97
B
ILE
613
B
ILE
107
B
GLU
555
B
GLU
49
B
PRO
565
B
PRO
59
B
VAL
541
B
VAL
35
B
THR
548
B
THR
42
A
VAL
713
A
VAL
207
A
LYS
715
A
LYS
209
B
ALA
629
B
ALA
123
B
MET
630
B
MET
124
B
VAL
653
B
VAL
147
B
PHE
654
B
PHE
148
B
LEU
685
B
LEU
179
B
GLY
687
B
GLY
181
B
GLU
694
B
GLU
188
B
VAL
695
B
VAL
189
B
GLU
657
B
GLU
151
B
ILE
658
B
ILE
152
B
ILE
665
B
ILE
159
B
VAL
666
B
VAL
160
BINDING SITE FOR RESIDUE MG A 801
A
MG
801
Software
2
BINDING SITE FOR RESIDUE BME B 801
B
BME
801
Software
4
BINDING SITE FOR RESIDUE MG B 802
B
MG
802
Software
6
A
ILE
668
A
ILE
162
2
1_555
A
CSO
669
A
CSO
163
2
1_555
A
GLU
533
A
GLU
27
4
80_555
A
PRO
535
A
PRO
29
4
80_555
B
CYS
669
B
CYS
163
4
1_555
B
HOH
1069
G
HOH
4
1_555
B
HOH
1037
G
HOH
6
1_555
B
HOH
1038
G
HOH
6
1_555
B
HOH
1039
G
HOH
6
1_555
B
HOH
1040
G
HOH
6
1_555
B
HOH
1073
G
HOH
6
1_555
B
HOH
1074
G
HOH
6
1_555
210
F 41 3 2