0.009761
0.005635
0.000000
-0.000000
0.011271
0.000000
0.000000
-0.000000
0.005900
0.00000
0.00000
0.00000
Kuglstatter, A.
Stihle, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
102.452
102.452
169.488
C18 H13 F4 N5 O2
407.322
N-{3-[(4S)-2-amino-5,5-difluoro-4-(fluoromethyl)-5,6-dihydro-4H-1,3-oxazin-4-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O S
78.133
DIMETHYL SULFOXIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Med.Chem.
JMCMAR
0151
0022-2623
56
3980
3995
10.1021/jm400225m
23590342
beta-Secretase (BACE1) Inhibitors with High In Vivo Efficacy Suitable for Clinical Evaluation in Alzheimer s Disease
2013
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2012-10-28
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
X10SA
SLS
1.0000
SYNCHROTRON
SLS BEAMLINE X10SA
45554.008
Beta-secretase 1
3.4.23.46
K307A
1
man
polymer
22.990
SODIUM ION
2
syn
non-polymer
78.133
DIMETHYL SULFOXIDE
1
syn
non-polymer
407.322
N-{3-[(4S)-2-amino-5,5-difluoro-4-(fluoromethyl)-5,6-dihydro-4H-1,3-oxazin-4-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
1
syn
non-polymer
18.015
water
253
nat
water
Aspartyl protease 2, ASP2, Asp 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Memapsin-2, Membrane-associated aspartic protease 2
no
no
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVASIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
BACE1, BACE, KIAA1149
9606
Homo sapiens
562
Escherichia coli
1
2.82
56.36
VAPOR DIFFUSION, SITTING DROP
7.0
2.5M SODIUM FORMATE, 100MM HEPES, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
software
repository
Initial release
Database references
Refinement description
1
0
2013-05-01
1
1
2013-06-19
1
2
2017-11-15
_software.name
RCSB
Y
RCSB
2013-02-01
REL
REL
NA
SODIUM ION
DMS
DIMETHYL SULFOXIDE
1HO
N-{3-[(4S)-2-amino-5,5-difluoro-4-(fluoromethyl)-5,6-dihydro-4H-1,3-oxazin-4-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
HOH
water
NA
1
2
NA
NA
501
A
NA
1
2
NA
NA
502
A
DMS
1
3
DMS
DMS
503
A
578
1
4
1HO
1HO
504
A
HOH
1
5
HOH
HOH
601
A
HOH
2
5
HOH
HOH
602
A
HOH
3
5
HOH
HOH
603
A
HOH
4
5
HOH
HOH
604
A
HOH
5
5
HOH
HOH
605
A
HOH
6
5
HOH
HOH
606
A
HOH
7
5
HOH
HOH
607
A
HOH
8
5
HOH
HOH
608
A
HOH
9
5
HOH
HOH
609
A
HOH
10
5
HOH
HOH
610
A
HOH
11
5
HOH
HOH
611
A
HOH
12
5
HOH
HOH
612
A
HOH
13
5
HOH
HOH
613
A
HOH
14
5
HOH
HOH
614
A
HOH
15
5
HOH
HOH
615
A
HOH
16
5
HOH
HOH
616
A
HOH
17
5
HOH
HOH
617
A
HOH
18
5
HOH
HOH
618
A
HOH
19
5
HOH
HOH
619
A
HOH
21
5
HOH
HOH
620
A
HOH
22
5
HOH
HOH
621
A
HOH
23
5
HOH
HOH
622
A
HOH
24
5
HOH
HOH
623
A
HOH
25
5
HOH
HOH
624
A
HOH
26
5
HOH
HOH
625
A
HOH
27
5
HOH
HOH
626
A
HOH
28
5
HOH
HOH
627
A
HOH
29
5
HOH
HOH
628
A
HOH
30
5
HOH
HOH
629
A
HOH
32
5
HOH
HOH
630
A
HOH
33
5
HOH
HOH
631
A
HOH
34
5
HOH
HOH
632
A
HOH
35
5
HOH
HOH
633
A
HOH
36
5
HOH
HOH
634
A
HOH
37
5
HOH
HOH
635
A
HOH
38
5
HOH
HOH
636
A
HOH
40
5
HOH
HOH
637
A
HOH
41
5
HOH
HOH
638
A
HOH
42
5
HOH
HOH
639
A
HOH
43
5
HOH
HOH
640
A
HOH
45
5
HOH
HOH
641
A
HOH
46
5
HOH
HOH
642
A
HOH
47
5
HOH
HOH
643
A
HOH
48
5
HOH
HOH
644
A
HOH
49
5
HOH
HOH
645
A
HOH
50
5
HOH
HOH
646
A
HOH
51
5
HOH
HOH
647
A
HOH
52
5
HOH
HOH
648
A
HOH
53
5
HOH
HOH
649
A
HOH
55
5
HOH
HOH
650
A
HOH
56
5
HOH
HOH
651
A
HOH
57
5
HOH
HOH
652
A
HOH
58
5
HOH
HOH
653
A
HOH
59
5
HOH
HOH
654
A
HOH
60
5
HOH
HOH
655
A
HOH
62
5
HOH
HOH
656
A
HOH
63
5
HOH
HOH
657
A
HOH
64
5
HOH
HOH
658
A
HOH
65
5
HOH
HOH
659
A
HOH
66
5
HOH
HOH
660
A
HOH
67
5
HOH
HOH
661
A
HOH
68
5
HOH
HOH
662
A
HOH
69
5
HOH
HOH
663
A
HOH
70
5
HOH
HOH
664
A
HOH
71
5
HOH
HOH
665
A
HOH
72
5
HOH
HOH
666
A
HOH
73
5
HOH
HOH
667
A
HOH
74
5
HOH
HOH
668
A
HOH
75
5
HOH
HOH
669
A
HOH
76
5
HOH
HOH
670
A
HOH
77
5
HOH
HOH
671
A
HOH
78
5
HOH
HOH
672
A
HOH
79
5
HOH
HOH
673
A
HOH
80
5
HOH
HOH
674
A
HOH
81
5
HOH
HOH
675
A
HOH
82
5
HOH
HOH
676
A
HOH
83
5
HOH
HOH
677
A
HOH
84
5
HOH
HOH
678
A
HOH
86
5
HOH
HOH
679
A
HOH
87
5
HOH
HOH
680
A
HOH
88
5
HOH
HOH
681
A
HOH
89
5
HOH
HOH
682
A
HOH
90
5
HOH
HOH
683
A
HOH
91
5
HOH
HOH
684
A
HOH
92
5
HOH
HOH
685
A
HOH
93
5
HOH
HOH
686
A
HOH
95
5
HOH
HOH
687
A
HOH
96
5
HOH
HOH
688
A
HOH
98
5
HOH
HOH
689
A
HOH
99
5
HOH
HOH
690
A
HOH
101
5
HOH
HOH
691
A
HOH
102
5
HOH
HOH
692
A
HOH
103
5
HOH
HOH
693
A
HOH
104
5
HOH
HOH
694
A
HOH
106
5
HOH
HOH
695
A
HOH
107
5
HOH
HOH
696
A
HOH
108
5
HOH
HOH
697
A
HOH
109
5
HOH
HOH
698
A
HOH
110
5
HOH
HOH
699
A
HOH
111
5
HOH
HOH
700
A
HOH
112
5
HOH
HOH
701
A
HOH
113
5
HOH
HOH
702
A
HOH
114
5
HOH
HOH
703
A
HOH
115
5
HOH
HOH
704
A
HOH
116
5
HOH
HOH
705
A
HOH
119
5
HOH
HOH
706
A
HOH
120
5
HOH
HOH
707
A
HOH
122
5
HOH
HOH
708
A
HOH
125
5
HOH
HOH
709
A
HOH
126
5
HOH
HOH
710
A
HOH
127
5
HOH
HOH
711
A
HOH
128
5
HOH
HOH
712
A
HOH
130
5
HOH
HOH
713
A
HOH
132
5
HOH
HOH
714
A
HOH
133
5
HOH
HOH
715
A
HOH
134
5
HOH
HOH
716
A
HOH
135
5
HOH
HOH
717
A
HOH
137
5
HOH
HOH
718
A
HOH
138
5
HOH
HOH
719
A
HOH
139
5
HOH
HOH
720
A
HOH
140
5
HOH
HOH
721
A
HOH
141
5
HOH
HOH
722
A
HOH
142
5
HOH
HOH
723
A
HOH
143
5
HOH
HOH
724
A
HOH
144
5
HOH
HOH
725
A
HOH
146
5
HOH
HOH
726
A
HOH
147
5
HOH
HOH
727
A
HOH
148
5
HOH
HOH
728
A
HOH
149
5
HOH
HOH
729
A
HOH
150
5
HOH
HOH
730
A
HOH
151
5
HOH
HOH
731
A
HOH
153
5
HOH
HOH
732
A
HOH
154
5
HOH
HOH
733
A
HOH
158
5
HOH
HOH
734
A
HOH
160
5
HOH
HOH
735
A
HOH
161
5
HOH
HOH
736
A
HOH
164
5
HOH
HOH
737
A
HOH
165
5
HOH
HOH
738
A
HOH
167
5
HOH
HOH
739
A
HOH
170
5
HOH
HOH
740
A
HOH
171
5
HOH
HOH
741
A
HOH
173
5
HOH
HOH
742
A
HOH
175
5
HOH
HOH
743
A
HOH
176
5
HOH
HOH
744
A
HOH
178
5
HOH
HOH
745
A
HOH
181
5
HOH
HOH
746
A
HOH
182
5
HOH
HOH
747
A
HOH
183
5
HOH
HOH
748
A
HOH
184
5
HOH
HOH
749
A
HOH
185
5
HOH
HOH
750
A
HOH
186
5
HOH
HOH
751
A
HOH
191
5
HOH
HOH
752
A
HOH
192
5
HOH
HOH
753
A
HOH
193
5
HOH
HOH
754
A
HOH
194
5
HOH
HOH
755
A
HOH
195
5
HOH
HOH
756
A
HOH
197
5
HOH
HOH
757
A
HOH
198
5
HOH
HOH
758
A
HOH
200
5
HOH
HOH
759
A
HOH
201
5
HOH
HOH
760
A
HOH
206
5
HOH
HOH
761
A
HOH
207
5
HOH
HOH
762
A
HOH
209
5
HOH
HOH
763
A
HOH
212
5
HOH
HOH
764
A
HOH
213
5
HOH
HOH
765
A
HOH
215
5
HOH
HOH
766
A
HOH
219
5
HOH
HOH
767
A
HOH
220
5
HOH
HOH
768
A
HOH
225
5
HOH
HOH
769
A
HOH
228
5
HOH
HOH
770
A
HOH
230
5
HOH
HOH
771
A
HOH
235
5
HOH
HOH
772
A
HOH
236
5
HOH
HOH
773
A
HOH
237
5
HOH
HOH
774
A
HOH
243
5
HOH
HOH
775
A
HOH
247
5
HOH
HOH
776
A
HOH
248
5
HOH
HOH
777
A
HOH
250
5
HOH
HOH
778
A
HOH
253
5
HOH
HOH
779
A
HOH
256
5
HOH
HOH
780
A
HOH
257
5
HOH
HOH
781
A
HOH
259
5
HOH
HOH
782
A
HOH
260
5
HOH
HOH
783
A
HOH
261
5
HOH
HOH
784
A
HOH
262
5
HOH
HOH
785
A
HOH
264
5
HOH
HOH
786
A
HOH
266
5
HOH
HOH
787
A
HOH
1189
5
HOH
HOH
788
A
HOH
1190
5
HOH
HOH
789
A
HOH
1192
5
HOH
HOH
790
A
HOH
1193
5
HOH
HOH
791
A
HOH
1194
5
HOH
HOH
792
A
HOH
1195
5
HOH
HOH
793
A
HOH
1196
5
HOH
HOH
794
A
HOH
1197
5
HOH
HOH
795
A
HOH
1199
5
HOH
HOH
796
A
HOH
1200
5
HOH
HOH
797
A
HOH
1202
5
HOH
HOH
798
A
HOH
1203
5
HOH
HOH
799
A
HOH
1204
5
HOH
HOH
800
A
HOH
1205
5
HOH
HOH
801
A
HOH
1207
5
HOH
HOH
802
A
HOH
1208
5
HOH
HOH
803
A
HOH
1209
5
HOH
HOH
804
A
HOH
1210
5
HOH
HOH
805
A
HOH
1211
5
HOH
HOH
806
A
HOH
1213
5
HOH
HOH
807
A
HOH
1215
5
HOH
HOH
808
A
HOH
1216
5
HOH
HOH
809
A
HOH
1217
5
HOH
HOH
810
A
HOH
1218
5
HOH
HOH
811
A
HOH
1221
5
HOH
HOH
812
A
HOH
1222
5
HOH
HOH
813
A
HOH
1223
5
HOH
HOH
814
A
HOH
1227
5
HOH
HOH
815
A
HOH
1228
5
HOH
HOH
816
A
HOH
1229
5
HOH
HOH
817
A
HOH
1231
5
HOH
HOH
818
A
HOH
1233
5
HOH
HOH
819
A
HOH
1236
5
HOH
HOH
820
A
HOH
1237
5
HOH
HOH
821
A
HOH
1238
5
HOH
HOH
822
A
HOH
1239
5
HOH
HOH
823
A
HOH
1240
5
HOH
HOH
824
A
HOH
1242
5
HOH
HOH
825
A
HOH
1246
5
HOH
HOH
826
A
HOH
1248
5
HOH
HOH
827
A
HOH
1249
5
HOH
HOH
828
A
HOH
1251
5
HOH
HOH
829
A
HOH
1265
5
HOH
HOH
830
A
HOH
1270
5
HOH
HOH
831
A
HOH
1272
5
HOH
HOH
832
A
HOH
1282
5
HOH
HOH
833
A
HOH
1283
5
HOH
HOH
834
A
HOH
1292
5
HOH
HOH
835
A
HOH
2219
5
HOH
HOH
836
A
HOH
2222
5
HOH
HOH
837
A
HOH
2224
5
HOH
HOH
838
A
HOH
2227
5
HOH
HOH
839
A
HOH
2228
5
HOH
HOH
840
A
HOH
2233
5
HOH
HOH
841
A
HOH
2234
5
HOH
HOH
842
A
HOH
2236
5
HOH
HOH
843
A
HOH
2237
5
HOH
HOH
844
A
HOH
2238
5
HOH
HOH
845
A
HOH
2240
5
HOH
HOH
846
A
HOH
2242
5
HOH
HOH
847
A
HOH
2243
5
HOH
HOH
848
A
HOH
2245
5
HOH
HOH
849
A
HOH
2255
5
HOH
HOH
850
A
HOH
2256
5
HOH
HOH
851
A
HOH
2257
5
HOH
HOH
852
A
HOH
2274
5
HOH
HOH
853
A
n
1
46
A
n
2
47
A
n
3
48
A
n
4
49
A
n
5
50
A
n
6
51
A
n
7
52
A
n
8
53
A
n
9
54
A
n
10
55
A
n
11
56
A
ARG
57
n
12
ARG
57
A
GLY
58
n
13
GLY
58
A
SER
59
n
14
SER
59
A
PHE
60
n
15
PHE
60
A
VAL
61
n
16
VAL
61
A
GLU
62
n
17
GLU
62
A
MET
63
n
18
MET
63
A
VAL
64
n
19
VAL
64
A
ASP
65
n
20
ASP
65
A
ASN
66
n
21
ASN
66
A
LEU
67
n
22
LEU
67
A
ARG
68
n
23
ARG
68
A
GLY
69
n
24
GLY
69
A
LYS
70
n
25
LYS
70
A
SER
71
n
26
SER
71
A
GLY
72
n
27
GLY
72
A
GLN
73
n
28
GLN
73
A
GLY
74
n
29
GLY
74
A
TYR
75
n
30
TYR
75
A
TYR
76
n
31
TYR
76
A
VAL
77
n
32
VAL
77
A
GLU
78
n
33
GLU
78
A
MET
79
n
34
MET
79
A
THR
80
n
35
THR
80
A
VAL
81
n
36
VAL
81
A
GLY
82
n
37
GLY
82
A
SER
83
n
38
SER
83
A
PRO
84
n
39
PRO
84
A
PRO
85
n
40
PRO
85
A
GLN
86
n
41
GLN
86
A
THR
87
n
42
THR
87
A
LEU
88
n
43
LEU
88
A
ASN
89
n
44
ASN
89
A
ILE
90
n
45
ILE
90
A
LEU
91
n
46
LEU
91
A
VAL
92
n
47
VAL
92
A
ASP
93
n
48
ASP
93
A
THR
94
n
49
THR
94
A
GLY
95
n
50
GLY
95
A
SER
96
n
51
SER
96
A
SER
97
n
52
SER
97
A
ASN
98
n
53
ASN
98
A
PHE
99
n
54
PHE
99
A
ALA
100
n
55
ALA
100
A
VAL
101
n
56
VAL
101
A
GLY
102
n
57
GLY
102
A
ALA
103
n
58
ALA
103
A
ALA
104
n
59
ALA
104
A
PRO
105
n
60
PRO
105
A
HIS
106
n
61
HIS
106
A
PRO
107
n
62
PRO
107
A
PHE
108
n
63
PHE
108
A
LEU
109
n
64
LEU
109
A
HIS
110
n
65
HIS
110
A
ARG
111
n
66
ARG
111
A
TYR
112
n
67
TYR
112
A
TYR
113
n
68
TYR
113
A
GLN
114
n
69
GLN
114
A
ARG
115
n
70
ARG
115
A
GLN
116
n
71
GLN
116
A
LEU
117
n
72
LEU
117
A
SER
118
n
73
SER
118
A
SER
119
n
74
SER
119
A
THR
120
n
75
THR
120
A
TYR
121
n
76
TYR
121
A
ARG
122
n
77
ARG
122
A
ASP
123
n
78
ASP
123
A
LEU
124
n
79
LEU
124
A
ARG
125
n
80
ARG
125
A
LYS
126
n
81
LYS
126
A
GLY
127
n
82
GLY
127
A
VAL
128
n
83
VAL
128
A
TYR
129
n
84
TYR
129
A
VAL
130
n
85
VAL
130
A
PRO
131
n
86
PRO
131
A
TYR
132
n
87
TYR
132
A
THR
133
n
88
THR
133
A
GLN
134
n
89
GLN
134
A
GLY
135
n
90
GLY
135
A
LYS
136
n
91
LYS
136
A
TRP
137
n
92
TRP
137
A
GLU
138
n
93
GLU
138
A
GLY
139
n
94
GLY
139
A
GLU
140
n
95
GLU
140
A
LEU
141
n
96
LEU
141
A
GLY
142
n
97
GLY
142
A
THR
143
n
98
THR
143
A
ASP
144
n
99
ASP
144
A
LEU
145
n
100
LEU
145
A
VAL
146
n
101
VAL
146
A
SER
147
n
102
SER
147
A
ILE
148
n
103
ILE
148
A
PRO
149
n
104
PRO
149
A
HIS
150
n
105
HIS
150
A
GLY
151
n
106
GLY
151
A
PRO
152
n
107
PRO
152
A
ASN
153
n
108
ASN
153
A
VAL
154
n
109
VAL
154
A
THR
155
n
110
THR
155
A
VAL
156
n
111
VAL
156
A
ARG
157
n
112
ARG
157
A
ALA
158
n
113
ALA
158
A
ASN
159
n
114
ASN
159
A
ILE
160
n
115
ILE
160
A
ALA
161
n
116
ALA
161
A
ALA
162
n
117
ALA
162
A
ILE
163
n
118
ILE
163
A
THR
164
n
119
THR
164
A
GLU
165
n
120
GLU
165
A
SER
166
n
121
SER
166
A
ASP
167
n
122
ASP
167
A
LYS
168
n
123
LYS
168
A
PHE
169
n
124
PHE
169
A
PHE
170
n
125
PHE
170
A
ILE
171
n
126
ILE
171
A
ASN
172
n
127
ASN
172
A
GLY
173
n
128
GLY
173
A
SER
174
n
129
SER
174
A
ASN
175
n
130
ASN
175
A
TRP
176
n
131
TRP
176
A
GLU
177
n
132
GLU
177
A
GLY
178
n
133
GLY
178
A
ILE
179
n
134
ILE
179
A
LEU
180
n
135
LEU
180
A
GLY
181
n
136
GLY
181
A
LEU
182
n
137
LEU
182
A
ALA
183
n
138
ALA
183
A
TYR
184
n
139
TYR
184
A
ALA
185
n
140
ALA
185
A
GLU
186
n
141
GLU
186
A
ILE
187
n
142
ILE
187
A
ALA
188
n
143
ALA
188
A
ARG
189
n
144
ARG
189
A
PRO
190
n
145
PRO
190
A
ASP
191
n
146
ASP
191
A
ASP
192
n
147
ASP
192
A
SER
193
n
148
SER
193
A
LEU
194
n
149
LEU
194
A
GLU
195
n
150
GLU
195
A
PRO
196
n
151
PRO
196
A
PHE
197
n
152
PHE
197
A
PHE
198
n
153
PHE
198
A
ASP
199
n
154
ASP
199
A
SER
200
n
155
SER
200
A
LEU
201
n
156
LEU
201
A
VAL
202
n
157
VAL
202
A
LYS
203
n
158
LYS
203
A
GLN
204
n
159
GLN
204
A
THR
205
n
160
THR
205
A
HIS
206
n
161
HIS
206
A
VAL
207
n
162
VAL
207
A
PRO
208
n
163
PRO
208
A
ASN
209
n
164
ASN
209
A
LEU
210
n
165
LEU
210
A
PHE
211
n
166
PHE
211
A
SER
212
n
167
SER
212
A
LEU
213
n
168
LEU
213
A
GLN
214
n
169
GLN
214
A
LEU
215
n
170
LEU
215
A
CYS
216
n
171
CYS
216
A
GLY
217
n
172
GLY
217
A
ALA
218
n
173
ALA
218
A
n
174
219
A
n
175
220
A
n
176
221
A
n
177
222
A
n
178
223
A
n
179
224
A
n
180
225
A
n
181
226
A
n
182
227
A
n
183
228
A
n
184
229
A
SER
230
n
185
SER
230
A
VAL
231
n
186
VAL
231
A
GLY
232
n
187
GLY
232
A
GLY
233
n
188
GLY
233
A
SER
234
n
189
SER
234
A
MET
235
n
190
MET
235
A
ILE
236
n
191
ILE
236
A
ILE
237
n
192
ILE
237
A
GLY
238
n
193
GLY
238
A
GLY
239
n
194
GLY
239
A
ILE
240
n
195
ILE
240
A
ASP
241
n
196
ASP
241
A
HIS
242
n
197
HIS
242
A
SER
243
n
198
SER
243
A
LEU
244
n
199
LEU
244
A
TYR
245
n
200
TYR
245
A
THR
246
n
201
THR
246
A
GLY
247
n
202
GLY
247
A
SER
248
n
203
SER
248
A
LEU
249
n
204
LEU
249
A
TRP
250
n
205
TRP
250
A
TYR
251
n
206
TYR
251
A
THR
252
n
207
THR
252
A
PRO
253
n
208
PRO
253
A
ILE
254
n
209
ILE
254
A
ARG
255
n
210
ARG
255
A
ARG
256
n
211
ARG
256
A
GLU
257
n
212
GLU
257
A
TRP
258
n
213
TRP
258
A
TYR
259
n
214
TYR
259
A
TYR
260
n
215
TYR
260
A
GLU
261
n
216
GLU
261
A
VAL
262
n
217
VAL
262
A
ILE
263
n
218
ILE
263
A
ILE
264
n
219
ILE
264
A
VAL
265
n
220
VAL
265
A
ARG
266
n
221
ARG
266
A
VAL
267
n
222
VAL
267
A
GLU
268
n
223
GLU
268
A
ILE
269
n
224
ILE
269
A
ASN
270
n
225
ASN
270
A
GLY
271
n
226
GLY
271
A
GLN
272
n
227
GLN
272
A
ASP
273
n
228
ASP
273
A
LEU
274
n
229
LEU
274
A
LYS
275
n
230
LYS
275
A
MET
276
n
231
MET
276
A
ASP
277
n
232
ASP
277
A
CYS
278
n
233
CYS
278
A
LYS
279
n
234
LYS
279
A
GLU
280
n
235
GLU
280
A
TYR
281
n
236
TYR
281
A
ASN
282
n
237
ASN
282
A
TYR
283
n
238
TYR
283
A
ASP
284
n
239
ASP
284
A
LYS
285
n
240
LYS
285
A
SER
286
n
241
SER
286
A
ILE
287
n
242
ILE
287
A
VAL
288
n
243
VAL
288
A
ASP
289
n
244
ASP
289
A
SER
290
n
245
SER
290
A
GLY
291
n
246
GLY
291
A
THR
292
n
247
THR
292
A
THR
293
n
248
THR
293
A
ASN
294
n
249
ASN
294
A
LEU
295
n
250
LEU
295
A
ARG
296
n
251
ARG
296
A
LEU
297
n
252
LEU
297
A
PRO
298
n
253
PRO
298
A
LYS
299
n
254
LYS
299
A
LYS
300
n
255
LYS
300
A
VAL
301
n
256
VAL
301
A
PHE
302
n
257
PHE
302
A
GLU
303
n
258
GLU
303
A
ALA
304
n
259
ALA
304
A
ALA
305
n
260
ALA
305
A
VAL
306
n
261
VAL
306
A
ALA
307
n
262
ALA
307
A
SER
308
n
263
SER
308
A
ILE
309
n
264
ILE
309
A
LYS
310
n
265
LYS
310
A
ALA
311
n
266
ALA
311
A
ALA
312
n
267
ALA
312
A
SER
313
n
268
SER
313
A
SER
314
n
269
SER
314
A
THR
315
n
270
THR
315
A
GLU
316
n
271
GLU
316
A
LYS
317
n
272
LYS
317
A
PHE
318
n
273
PHE
318
A
PRO
319
n
274
PRO
319
A
ASP
320
n
275
ASP
320
A
GLY
321
n
276
GLY
321
A
PHE
322
n
277
PHE
322
A
TRP
323
n
278
TRP
323
A
LEU
324
n
279
LEU
324
A
GLY
325
n
280
GLY
325
A
GLU
326
n
281
GLU
326
A
GLN
327
n
282
GLN
327
A
LEU
328
n
283
LEU
328
A
VAL
329
n
284
VAL
329
A
CYS
330
n
285
CYS
330
A
TRP
331
n
286
TRP
331
A
GLN
332
n
287
GLN
332
A
ALA
333
n
288
ALA
333
A
GLY
334
n
289
GLY
334
A
THR
335
n
290
THR
335
A
THR
336
n
291
THR
336
A
PRO
337
n
292
PRO
337
A
TRP
338
n
293
TRP
338
A
ASN
339
n
294
ASN
339
A
ILE
340
n
295
ILE
340
A
PHE
341
n
296
PHE
341
A
PRO
342
n
297
PRO
342
A
VAL
343
n
298
VAL
343
A
ILE
344
n
299
ILE
344
A
SER
345
n
300
SER
345
A
LEU
346
n
301
LEU
346
A
TYR
347
n
302
TYR
347
A
LEU
348
n
303
LEU
348
A
MET
349
n
304
MET
349
A
GLY
350
n
305
GLY
350
A
GLU
351
n
306
GLU
351
A
VAL
352
n
307
VAL
352
A
THR
353
n
308
THR
353
A
ASN
354
n
309
ASN
354
A
GLN
355
n
310
GLN
355
A
SER
356
n
311
SER
356
A
PHE
357
n
312
PHE
357
A
ARG
358
n
313
ARG
358
A
ILE
359
n
314
ILE
359
A
THR
360
n
315
THR
360
A
ILE
361
n
316
ILE
361
A
LEU
362
n
317
LEU
362
A
PRO
363
n
318
PRO
363
A
GLN
364
n
319
GLN
364
A
GLN
365
n
320
GLN
365
A
TYR
366
n
321
TYR
366
A
LEU
367
n
322
LEU
367
A
ARG
368
n
323
ARG
368
A
PRO
369
n
324
PRO
369
A
VAL
370
n
325
VAL
370
A
n
326
371
A
n
327
372
A
n
328
373
A
n
329
374
A
n
330
375
A
n
331
376
A
n
332
377
A
n
333
378
A
ASP
379
n
334
ASP
379
A
CYS
380
n
335
CYS
380
A
TYR
381
n
336
TYR
381
A
LYS
382
n
337
LYS
382
A
PHE
383
n
338
PHE
383
A
ALA
384
n
339
ALA
384
A
ILE
385
n
340
ILE
385
A
SER
386
n
341
SER
386
A
GLN
387
n
342
GLN
387
A
SER
388
n
343
SER
388
A
SER
389
n
344
SER
389
A
THR
390
n
345
THR
390
A
GLY
391
n
346
GLY
391
A
THR
392
n
347
THR
392
A
VAL
393
n
348
VAL
393
A
MET
394
n
349
MET
394
A
GLY
395
n
350
GLY
395
A
ALA
396
n
351
ALA
396
A
VAL
397
n
352
VAL
397
A
ILE
398
n
353
ILE
398
A
MET
399
n
354
MET
399
A
GLU
400
n
355
GLU
400
A
GLY
401
n
356
GLY
401
A
PHE
402
n
357
PHE
402
A
TYR
403
n
358
TYR
403
A
VAL
404
n
359
VAL
404
A
VAL
405
n
360
VAL
405
A
PHE
406
n
361
PHE
406
A
ASP
407
n
362
ASP
407
A
ARG
408
n
363
ARG
408
A
ALA
409
n
364
ALA
409
A
ARG
410
n
365
ARG
410
A
LYS
411
n
366
LYS
411
A
ARG
412
n
367
ARG
412
A
ILE
413
n
368
ILE
413
A
GLY
414
n
369
GLY
414
A
PHE
415
n
370
PHE
415
A
ALA
416
n
371
ALA
416
A
VAL
417
n
372
VAL
417
A
SER
418
n
373
SER
418
A
ALA
419
n
374
ALA
419
A
CYS
420
n
375
CYS
420
A
HIS
421
n
376
HIS
421
A
VAL
422
n
377
VAL
422
A
HIS
423
n
378
HIS
423
A
ASP
424
n
379
ASP
424
A
GLU
425
n
380
GLU
425
A
PHE
426
n
381
PHE
426
A
ARG
427
n
382
ARG
427
A
THR
428
n
383
THR
428
A
ALA
429
n
384
ALA
429
A
ALA
430
n
385
ALA
430
A
VAL
431
n
386
VAL
431
A
GLU
432
n
387
GLU
432
A
GLY
433
n
388
GLY
433
A
PRO
434
n
389
PRO
434
A
PHE
435
n
390
PHE
435
A
VAL
436
n
391
VAL
436
A
THR
437
n
392
THR
437
A
LEU
438
n
393
LEU
438
A
ASP
439
n
394
ASP
439
A
MET
440
n
395
MET
440
A
GLU
441
n
396
GLU
441
A
ASP
442
n
397
ASP
442
A
CYS
443
n
398
CYS
443
A
GLY
444
n
399
GLY
444
A
TYR
445
n
400
TYR
445
A
ASN
446
n
401
ASN
446
A
n
402
447
A
n
403
448
A
n
404
449
A
n
405
450
A
n
406
451
A
n
407
452
A
n
408
453
A
n
409
454
A
2.0442
-1.0703
0.8322
0.9090
-0.2947
1.1243
0.0022
-0.0308
-0.1187
-0.0012
0.0133
0.0849
0.0016
-0.0168
-0.0155
0.0048
-0.0095
-0.0106
0.0230
0.0073
0.0926
refined
-13.3673
-40.9675
0.0844
X-RAY DIFFRACTION
A
601
A
853
X-RAY DIFFRACTION
1
A
501
A
504
X-RAY DIFFRACTION
1
A
57
A
446
X-RAY DIFFRACTION
1
author_and_software_defined_assembly
PISA
1
monomeric
A
HOH
793
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
THR
205
A
O
THR
160
1_555
78.3
A
HOH
793
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
733
F
O
HOH
1_555
165.1
A
THR
205
A
O
THR
160
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
733
F
O
HOH
1_555
101.0
A
HOH
793
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
VAL
202
A
O
VAL
157
1_555
93.7
A
THR
205
A
O
THR
160
1_555
A
NA
502
C
NA
NA
1_555
A
VAL
202
A
O
VAL
157
1_555
84.7
A
HOH
733
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
VAL
202
A
O
VAL
157
1_555
101.1
A
HOH
793
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
767
F
O
HOH
1_555
85.6
A
THR
205
A
O
THR
160
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
767
F
O
HOH
1_555
158.8
A
HOH
733
F
O
HOH
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
767
F
O
HOH
1_555
98.1
A
VAL
202
A
O
VAL
157
1_555
A
NA
502
C
NA
NA
1_555
A
HOH
767
F
O
HOH
1_555
82.6
A
HOH
672
F
O
HOH
1_555
A
NA
501
B
NA
NA
1_555
A
TYR
245
A
O
TYR
200
1_555
98.7
A
HOH
672
F
O
HOH
1_555
A
NA
501
B
NA
NA
1_555
A
HIS
242
A
O
HIS
197
1_555
155.3
A
TYR
245
A
O
TYR
200
1_555
A
NA
501
B
NA
NA
1_555
A
HIS
242
A
O
HIS
197
1_555
82.0
A
HOH
672
F
O
HOH
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
801
F
O
HOH
1_555
106.0
A
TYR
245
A
O
TYR
200
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
801
F
O
HOH
1_555
70.3
A
HIS
242
A
O
HIS
197
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
801
F
O
HOH
1_555
97.5
A
HOH
672
F
O
HOH
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
745
F
O
HOH
1_555
58.1
A
TYR
245
A
O
TYR
200
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
745
F
O
HOH
1_555
139.9
A
HIS
242
A
O
HIS
197
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
745
F
O
HOH
1_555
106.1
A
HOH
801
F
O
HOH
1_555
A
NA
501
B
NA
NA
1_555
A
HOH
745
F
O
HOH
1_555
143.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
130
A
N
VAL
85
A
O
TRP
137
A
O
TRP
92
A
O
SER
147
A
O
SER
102
A
N
THR
80
A
N
THR
35
A
O
TYR
76
A
O
TYR
31
A
N
ARG
68
A
N
ARG
23
A
N
LEU
67
A
N
LEU
22
A
O
GLY
233
A
O
GLY
188
A
O
SER
234
A
O
SER
189
A
N
GLN
214
A
N
GLN
169
A
N
PHE
211
A
N
PHE
166
A
O
PHE
406
A
O
PHE
361
A
N
TYR
403
A
N
TYR
358
A
O
ALA
416
A
O
ALA
371
A
O
ILE
413
A
O
ILE
368
A
N
THR
252
A
N
THR
207
A
N
VAL
130
A
N
VAL
85
A
O
TRP
137
A
O
TRP
92
A
N
GLU
140
A
N
GLU
95
A
O
ALA
162
A
O
ALA
117
A
O
ILE
163
A
O
ILE
118
A
N
VAL
101
A
N
VAL
56
A
N
ALA
100
A
N
ALA
55
A
O
ILE
179
A
O
ILE
134
A
O
LEU
180
A
O
LEU
135
A
N
LEU
91
A
N
LEU
46
A
O
LEU
88
A
O
LEU
43
A
N
MET
79
A
N
MET
34
A
O
TYR
76
A
O
TYR
31
A
N
ARG
68
A
N
ARG
23
A
N
LEU
67
A
N
LEU
22
A
O
GLY
233
A
O
GLY
188
A
O
SER
234
A
O
SER
189
A
N
GLN
214
A
N
GLN
169
A
N
PHE
211
A
N
PHE
166
A
O
PHE
406
A
O
PHE
361
A
N
TYR
403
A
N
TYR
358
A
O
ALA
416
A
O
ALA
371
A
O
ILE
413
A
O
ILE
368
A
N
THR
252
A
N
THR
207
A
N
VAL
262
A
N
VAL
217
A
O
SER
286
A
O
SER
241
A
N
ILE
287
A
N
ILE
242
A
O
MET
394
A
O
MET
349
A
O
VAL
393
A
O
VAL
348
A
N
ARG
296
A
N
ARG
251
A
N
LEU
297
A
N
LEU
252
A
O
SER
386
A
O
SER
341
A
O
GLN
272
A
O
GLN
227
A
N
ILE
269
A
N
ILE
224
A
N
ARG
266
A
N
ARG
221
A
O
TYR
347
A
O
TYR
302
A
N
LEU
346
A
N
LEU
301
A
O
ILE
359
A
O
ILE
314
A
N
ARG
358
A
N
ARG
313
A
O
GLU
432
A
O
GLU
387
A
N
VAL
329
A
N
VAL
284
A
O
TYR
381
A
O
TYR
336
A
O
LYS
382
A
O
LYS
337
A
N
ARG
368
A
N
ARG
323
1
A
HOH
783
F
HOH
1
A
GLU
46
A
GLU
1
1
Y
1
A
THR
47
A
THR
2
1
Y
1
A
ASP
48
A
ASP
3
1
Y
1
A
GLU
49
A
GLU
4
1
Y
1
A
GLU
50
A
GLU
5
1
Y
1
A
PRO
51
A
PRO
6
1
Y
1
A
GLU
52
A
GLU
7
1
Y
1
A
GLU
53
A
GLU
8
1
Y
1
A
PRO
54
A
PRO
9
1
Y
1
A
GLY
55
A
GLY
10
1
Y
1
A
ARG
56
A
ARG
11
1
Y
1
A
GLY
219
A
GLY
174
1
Y
1
A
PHE
220
A
PHE
175
1
Y
1
A
PRO
221
A
PRO
176
1
Y
1
A
LEU
222
A
LEU
177
1
Y
1
A
ASN
223
A
ASN
178
1
Y
1
A
GLN
224
A
GLN
179
1
Y
1
A
SER
225
A
SER
180
1
Y
1
A
GLU
226
A
GLU
181
1
Y
1
A
VAL
227
A
VAL
182
1
Y
1
A
LEU
228
A
LEU
183
1
Y
1
A
ALA
229
A
ALA
184
1
Y
1
A
GLU
371
A
GLU
326
1
Y
1
A
ASP
372
A
ASP
327
1
Y
1
A
VAL
373
A
VAL
328
1
Y
1
A
ALA
374
A
ALA
329
1
Y
1
A
THR
375
A
THR
330
1
Y
1
A
SER
376
A
SER
331
1
Y
1
A
GLN
377
A
GLN
332
1
Y
1
A
ASP
378
A
ASP
333
1
Y
1
A
ILE
447
A
ILE
402
1
Y
1
A
PRO
448
A
PRO
403
1
Y
1
A
GLN
449
A
GLN
404
1
Y
1
A
THR
450
A
THR
405
1
Y
1
A
ASP
451
A
ASP
406
1
Y
1
A
GLU
452
A
GLU
407
1
Y
1
A
SER
453
A
SER
408
1
Y
1
A
THR
454
A
THR
409
1
Y
1
A
A
OE2
O
GLU
HOH
303
788
1.43
1
A
A
O
O
HOH
HOH
674
771
1.63
1
A
A
O
O
HOH
HOH
668
746
1.99
1
A
A
NZ
OE1
LYS
GLU
136
165
2.03
1
A
A
TRP
TYR
258
259
149.74
1
4.04
0.50
120.30
124.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
189
189
189
N
1
A
A
CB
OG
SER
SER
308
308
-0.079
0.013
1.418
1.339
N
1
A
A
O
O
HOH
HOH
794
794
1.61
1_555
10_444
1
A
A
O
O
HOH
HOH
839
839
1.87
1_555
10_444
1
A
PHE
60
-146.14
54.10
1
A
GLU
177
-140.39
18.09
1
A
TRP
258
-140.22
-85.46
1
A
SER
314
-60.83
1.33
52.754
0.08
0.08
0.00
0.08
0.00
-0.26
0.972
0.952
0.21718
0.16645
0.16892
2.01
49.04
1787
33889
5.0
99.98
8.280
0.097
RANDOM
1
THROUGHOUT
FOURIER SYNTHESIS
0.134
0.137
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
MASK
2.01
49.04
253
3206
35
0
2918
0.020
0.019
3061
2.022
1.958
4170
7.174
5.000
378
32.332
23.478
138
15.033
15.000
486
14.113
15.000
19
0.140
0.200
452
0.011
0.021
2352
0.395
0.349
2.062
131
2453
20
99.96
37.2
2.01
49.04
4J1C
35745
0.152
1
17.0
19.2
100.0
2.01
2.12
1.6
5094
1
19.8
100.0
data collection
RemDAq
refinement
REFMAC
data reduction
XDS
data scaling
SCALA
phasing
REFMAC
Beta-secretase 1 (E.C.3.4.23.46)
CRYSTAL STRUCTURE OF BACE-1 IN COMPLEX WITH 5-Cyano-pyridine-2-carboxylic acid [3-((S)-2-amino-5,5-difluoro-4-fluoromethyl-5,6-dihydro-4H-[1,3]oxazin-4-yl)-4-fluoro-phenyl]-amide
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
PHE
60
A
PHE
15
HELX_P
A
VAL
64
A
VAL
19
5
1
5
A
GLN
114
A
GLN
69
HELX_P
A
SER
118
A
SER
73
5
2
5
A
TYR
184
A
TYR
139
HELX_P
A
ALA
188
A
ALA
143
5
3
5
A
PRO
196
A
PRO
151
HELX_P
A
THR
205
A
THR
160
1
4
10
A
ASP
241
A
ASP
196
HELX_P
A
SER
243
A
SER
198
5
5
3
A
ASP
277
A
ASP
232
HELX_P
A
TYR
283
A
TYR
238
5
6
7
A
LYS
299
A
LYS
254
HELX_P
A
SER
313
A
SER
268
1
7
15
A
PRO
319
A
PRO
274
HELX_P
A
LEU
324
A
LEU
279
1
8
6
A
PRO
337
A
PRO
292
HELX_P
A
PHE
341
A
PHE
296
5
9
5
A
LEU
362
A
LEU
317
HELX_P
A
TYR
366
A
TYR
321
1
10
5
A
GLY
395
A
GLY
350
HELX_P
A
GLU
400
A
GLU
355
1
11
6
A
ARG
408
A
ARG
363
HELX_P
A
ARG
410
A
ARG
365
5
12
3
A
MET
440
A
MET
395
HELX_P
A
GLY
444
A
GLY
399
5
13
5
disulf
2.139
A
CYS
216
A
SG
CYS
171
1_555
A
CYS
420
A
SG
CYS
375
1_555
disulf
2.097
A
CYS
278
A
SG
CYS
233
1_555
A
CYS
443
A
SG
CYS
398
1_555
disulf
2.095
A
CYS
330
A
SG
CYS
285
1_555
A
CYS
380
A
SG
CYS
335
1_555
metalc
2.222
A
NA
502
C
NA
NA
1_555
A
HOH
793
F
O
HOH
1_555
metalc
2.249
A
THR
205
A
O
THR
160
1_555
A
NA
502
C
NA
NA
1_555
metalc
2.272
A
NA
502
C
NA
NA
1_555
A
HOH
733
F
O
HOH
1_555
metalc
2.382
A
VAL
202
A
O
VAL
157
1_555
A
NA
502
C
NA
NA
1_555
metalc
2.448
A
NA
501
B
NA
NA
1_555
A
HOH
672
F
O
HOH
1_555
metalc
2.469
A
TYR
245
A
O
TYR
200
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.472
A
HIS
242
A
O
HIS
197
1_555
A
NA
501
B
NA
NA
1_555
metalc
2.511
A
NA
501
B
NA
NA
1_555
A
HOH
801
F
O
HOH
1_555
metalc
2.726
A
NA
502
C
NA
NA
1_555
A
HOH
767
F
O
HOH
1_555
metalc
3.100
A
NA
501
B
NA
NA
1_555
A
HOH
745
F
O
HOH
1_555
HYDROLASE/HYDROLASE INHIBITOR
protease inhibitor, HYDROLASE-HYDROLASE INHIBITOR complex
A
SER
83
A
SER
38
1
A
PRO
84
A
PRO
39
-4.01
A
ARG
189
A
ARG
144
1
A
PRO
190
A
PRO
145
7.00
A
TYR
283
A
TYR
238
1
A
ASP
284
A
ASP
239
2.23
A
GLY
433
A
GLY
388
1
A
PRO
434
A
PRO
389
-3.73
BACE1_HUMAN
UNP
1
46
P56817
ETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLR
KGVYVPYTQGKWEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQT
HVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDK
SIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQ
YLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVTLDMEDCGY
NIPQTDEST
46
454
4J1C
46
454
P56817
A
1
1
409
1
LYS
ENGINEERED MUTATION
ALA
307
4J1C
A
P56817
UNP
307
262
9
13
5
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
122
A
ARG
77
A
PRO
131
A
PRO
86
A
LYS
136
A
LYS
91
A
SER
147
A
SER
102
A
TYR
75
A
TYR
30
A
VAL
81
A
VAL
36
A
LEU
67
A
LEU
22
A
GLY
69
A
GLY
24
A
VAL
231
A
VAL
186
A
ILE
237
A
ILE
192
A
PHE
211
A
PHE
166
A
CYS
216
A
CYS
171
A
PHE
402
A
PHE
357
A
ASP
407
A
ASP
362
A
ARG
412
A
ARG
367
A
SER
418
A
SER
373
A
TYR
245
A
TYR
200
A
PRO
253
A
PRO
208
A
ARG
122
A
ARG
77
A
PRO
131
A
PRO
86
A
LYS
136
A
LYS
91
A
SER
147
A
SER
102
A
VAL
156
A
VAL
111
A
ASP
167
A
ASP
122
A
PHE
99
A
PHE
54
A
GLY
102
A
GLY
57
A
GLY
178
A
GLY
133
A
GLY
181
A
GLY
136
A
GLN
86
A
GLN
41
A
ASP
93
A
ASP
48
A
TYR
75
A
TYR
30
A
VAL
81
A
VAL
36
A
LEU
67
A
LEU
22
A
GLY
69
A
GLY
24
A
VAL
231
A
VAL
186
A
ILE
237
A
ILE
192
A
PHE
211
A
PHE
166
A
CYS
216
A
CYS
171
A
PHE
402
A
PHE
357
A
ASP
407
A
ASP
362
A
ARG
412
A
ARG
367
A
SER
418
A
SER
373
A
TYR
245
A
TYR
200
A
PRO
253
A
PRO
208
A
GLU
261
A
GLU
216
A
VAL
262
A
VAL
217
A
SER
286
A
SER
241
A
VAL
288
A
VAL
243
A
THR
392
A
THR
347
A
MET
394
A
MET
349
A
LEU
295
A
LEU
250
A
PRO
298
A
PRO
253
A
ILE
385
A
ILE
340
A
SER
388
A
SER
343
A
GLN
272
A
GLN
227
A
ASP
273
A
ASP
228
A
ILE
264
A
ILE
219
A
ILE
269
A
ILE
224
A
ILE
344
A
ILE
299
A
MET
349
A
MET
304
A
GLN
355
A
GLN
310
A
ILE
361
A
ILE
316
A
ALA
430
A
ALA
385
A
VAL
436
A
VAL
391
A
VAL
329
A
VAL
284
A
CYS
330
A
CYS
285
A
CYS
380
A
CYS
335
A
PHE
383
A
PHE
338
A
LEU
367
A
LEU
322
A
PRO
369
A
PRO
324
BINDING SITE FOR RESIDUE NA A 501
Software
5
BINDING SITE FOR RESIDUE NA A 502
Software
5
BINDING SITE FOR RESIDUE DMS A 503
Software
3
BINDING SITE FOR RESIDUE 1HO A 504
Software
16
A
HIS
242
A
HIS
197
5
1_555
A
TYR
245
A
TYR
200
5
1_555
A
HOH
672
F
HOH
5
1_555
A
HOH
745
F
HOH
5
1_555
A
HOH
801
F
HOH
5
1_555
A
VAL
202
A
VAL
157
5
1_555
A
THR
205
A
THR
160
5
1_555
A
HOH
733
F
HOH
5
1_555
A
HOH
767
F
HOH
5
1_555
A
HOH
793
F
HOH
5
1_555
A
ARG
157
A
ARG
112
3
1_555
A
ASN
159
A
ASN
114
3
1_555
A
GLU
195
A
GLU
150
3
1_555
A
GLY
72
A
GLY
27
16
1_555
A
GLN
73
A
GLN
28
16
1_555
A
GLY
74
A
GLY
29
16
1_555
A
LEU
91
A
LEU
46
16
1_555
A
ASP
93
A
ASP
48
16
1_555
A
SER
96
A
SER
51
16
1_555
A
TYR
132
A
TYR
87
16
1_555
A
PHE
169
A
PHE
124
16
1_555
A
ILE
171
A
ILE
126
16
1_555
A
ILE
179
A
ILE
134
16
1_555
A
ASP
289
A
ASP
244
16
1_555
A
SER
290
A
SER
245
16
1_555
A
GLY
291
A
GLY
246
16
1_555
A
THR
293
A
THR
248
16
1_555
A
ALA
396
A
ALA
351
16
1_555
A
HOH
846
F
HOH
16
1_555
178
P 61 2 2