0.015794
0.000000
0.002964
0.000000
0.013268
0.000000
0.000000
0.000000
0.029070
0.00000
0.00000
0.00000
Schellenberg, M.J.
Appel, C.D.
Krahn, J.
Williams, R.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
100.63
90.00
63.315
75.372
35.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
32
1225
1237
10.1038/emboj.2013.51
23481255
Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.
2013
10.2210/pdb4j5q/pdb
pdb_00004j5q
100
1
CCD
2010-11-11
MARMOSAIC 300 mm CCD
Si 111
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
22-BM
APS
1.0000
SYNCHROTRON
APS BEAMLINE 22-BM
16446.037
O-acetyl-ADP-ribose deacetylase 1
3.5.1.-
1
man
polymer
18.015
water
235
nat
water
no
no
EDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKR
ASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
EDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKR
ASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
C6orf130, OARD1
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET15b
1
2.50
50.71
VAPOR DIFFUSION
5.6
100mM sodium citrate, 20% isopropanol, 20% PEG 4000 , pH 5.6, VAPOR DIFFUSION, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Database references
Data collection
Database references
Refinement description
1
0
2013-03-27
1
1
2013-05-01
1
2
2013-07-03
1
3
2023-09-20
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2013-02-09
REL
REL
HOH
water
2JYC
pdb entry 2JYC
PDB
experimental model
HOH
201
2
HOH
HOH
201
A
HOH
202
2
HOH
HOH
202
A
HOH
203
2
HOH
HOH
203
A
HOH
204
2
HOH
HOH
204
A
HOH
205
2
HOH
HOH
205
A
HOH
206
2
HOH
HOH
206
A
HOH
207
2
HOH
HOH
207
A
HOH
208
2
HOH
HOH
208
A
HOH
209
2
HOH
HOH
209
A
HOH
210
2
HOH
HOH
210
A
HOH
211
2
HOH
HOH
211
A
HOH
212
2
HOH
HOH
212
A
HOH
213
2
HOH
HOH
213
A
HOH
214
2
HOH
HOH
214
A
HOH
215
2
HOH
HOH
215
A
HOH
216
2
HOH
HOH
216
A
HOH
217
2
HOH
HOH
217
A
HOH
218
2
HOH
HOH
218
A
HOH
219
2
HOH
HOH
219
A
HOH
220
2
HOH
HOH
220
A
HOH
221
2
HOH
HOH
221
A
HOH
222
2
HOH
HOH
222
A
HOH
223
2
HOH
HOH
223
A
HOH
224
2
HOH
HOH
224
A
HOH
225
2
HOH
HOH
225
A
HOH
226
2
HOH
HOH
226
A
HOH
227
2
HOH
HOH
227
A
HOH
228
2
HOH
HOH
228
A
HOH
229
2
HOH
HOH
229
A
HOH
230
2
HOH
HOH
230
A
HOH
231
2
HOH
HOH
231
A
HOH
232
2
HOH
HOH
232
A
HOH
233
2
HOH
HOH
233
A
HOH
234
2
HOH
HOH
234
A
HOH
235
2
HOH
HOH
235
A
HOH
236
2
HOH
HOH
236
A
HOH
237
2
HOH
HOH
237
A
HOH
238
2
HOH
HOH
238
A
HOH
239
2
HOH
HOH
239
A
HOH
240
2
HOH
HOH
240
A
HOH
241
2
HOH
HOH
241
A
HOH
242
2
HOH
HOH
242
A
HOH
243
2
HOH
HOH
243
A
HOH
244
2
HOH
HOH
244
A
HOH
245
2
HOH
HOH
245
A
HOH
246
2
HOH
HOH
246
A
HOH
247
2
HOH
HOH
247
A
HOH
248
2
HOH
HOH
248
A
HOH
249
2
HOH
HOH
249
A
HOH
250
2
HOH
HOH
250
A
HOH
251
2
HOH
HOH
251
A
HOH
252
2
HOH
HOH
252
A
HOH
253
2
HOH
HOH
253
A
HOH
254
2
HOH
HOH
254
A
HOH
255
2
HOH
HOH
255
A
HOH
256
2
HOH
HOH
256
A
HOH
257
2
HOH
HOH
257
A
HOH
258
2
HOH
HOH
258
A
HOH
259
2
HOH
HOH
259
A
HOH
260
2
HOH
HOH
260
A
HOH
261
2
HOH
HOH
261
A
HOH
262
2
HOH
HOH
262
A
HOH
263
2
HOH
HOH
263
A
HOH
264
2
HOH
HOH
264
A
HOH
265
2
HOH
HOH
265
A
HOH
266
2
HOH
HOH
266
A
HOH
267
2
HOH
HOH
267
A
HOH
268
2
HOH
HOH
268
A
HOH
269
2
HOH
HOH
269
A
HOH
270
2
HOH
HOH
270
A
HOH
271
2
HOH
HOH
271
A
HOH
272
2
HOH
HOH
272
A
HOH
273
2
HOH
HOH
273
A
HOH
274
2
HOH
HOH
274
A
HOH
275
2
HOH
HOH
275
A
HOH
276
2
HOH
HOH
276
A
HOH
277
2
HOH
HOH
277
A
HOH
278
2
HOH
HOH
278
A
HOH
279
2
HOH
HOH
279
A
HOH
280
2
HOH
HOH
280
A
HOH
281
2
HOH
HOH
281
A
HOH
282
2
HOH
HOH
282
A
HOH
283
2
HOH
HOH
283
A
HOH
284
2
HOH
HOH
284
A
HOH
285
2
HOH
HOH
285
A
HOH
286
2
HOH
HOH
286
A
HOH
287
2
HOH
HOH
287
A
HOH
288
2
HOH
HOH
288
A
HOH
289
2
HOH
HOH
289
A
HOH
290
2
HOH
HOH
290
A
HOH
291
2
HOH
HOH
291
A
HOH
292
2
HOH
HOH
292
A
HOH
293
2
HOH
HOH
293
A
HOH
294
2
HOH
HOH
294
A
HOH
295
2
HOH
HOH
295
A
HOH
296
2
HOH
HOH
296
A
HOH
297
2
HOH
HOH
297
A
HOH
298
2
HOH
HOH
298
A
HOH
299
2
HOH
HOH
299
A
HOH
300
2
HOH
HOH
300
A
HOH
301
2
HOH
HOH
301
A
HOH
302
2
HOH
HOH
302
A
HOH
303
2
HOH
HOH
303
A
HOH
304
2
HOH
HOH
304
A
HOH
305
2
HOH
HOH
305
A
HOH
306
2
HOH
HOH
306
A
HOH
307
2
HOH
HOH
307
A
HOH
308
2
HOH
HOH
308
A
HOH
309
2
HOH
HOH
309
A
HOH
310
2
HOH
HOH
310
A
HOH
311
2
HOH
HOH
311
A
HOH
312
2
HOH
HOH
312
A
HOH
313
2
HOH
HOH
313
A
HOH
314
2
HOH
HOH
314
A
HOH
315
2
HOH
HOH
315
A
HOH
316
2
HOH
HOH
316
A
HOH
317
2
HOH
HOH
317
A
HOH
318
2
HOH
HOH
318
A
HOH
319
2
HOH
HOH
319
A
HOH
320
2
HOH
HOH
320
A
HOH
321
2
HOH
HOH
321
A
HOH
322
2
HOH
HOH
322
A
HOH
323
2
HOH
HOH
323
A
HOH
324
2
HOH
HOH
324
A
HOH
325
2
HOH
HOH
325
A
HOH
326
2
HOH
HOH
326
A
HOH
327
2
HOH
HOH
327
A
HOH
328
2
HOH
HOH
328
A
HOH
329
2
HOH
HOH
329
A
HOH
330
2
HOH
HOH
330
A
HOH
331
2
HOH
HOH
331
A
HOH
332
2
HOH
HOH
332
A
HOH
333
2
HOH
HOH
333
A
HOH
334
2
HOH
HOH
334
A
HOH
335
2
HOH
HOH
335
A
HOH
336
2
HOH
HOH
336
A
HOH
337
2
HOH
HOH
337
A
HOH
338
2
HOH
HOH
338
A
HOH
339
2
HOH
HOH
339
A
HOH
340
2
HOH
HOH
340
A
HOH
341
2
HOH
HOH
341
A
HOH
342
2
HOH
HOH
342
A
HOH
343
2
HOH
HOH
343
A
HOH
344
2
HOH
HOH
344
A
HOH
345
2
HOH
HOH
345
A
HOH
346
2
HOH
HOH
346
A
HOH
347
2
HOH
HOH
347
A
HOH
348
2
HOH
HOH
348
A
HOH
349
2
HOH
HOH
349
A
HOH
350
2
HOH
HOH
350
A
HOH
351
2
HOH
HOH
351
A
HOH
352
2
HOH
HOH
352
A
HOH
353
2
HOH
HOH
353
A
HOH
354
2
HOH
HOH
354
A
HOH
355
2
HOH
HOH
355
A
HOH
356
2
HOH
HOH
356
A
HOH
357
2
HOH
HOH
357
A
HOH
358
2
HOH
HOH
358
A
HOH
359
2
HOH
HOH
359
A
HOH
360
2
HOH
HOH
360
A
HOH
361
2
HOH
HOH
361
A
HOH
362
2
HOH
HOH
362
A
HOH
363
2
HOH
HOH
363
A
HOH
364
2
HOH
HOH
364
A
HOH
365
2
HOH
HOH
365
A
HOH
366
2
HOH
HOH
366
A
HOH
367
2
HOH
HOH
367
A
HOH
368
2
HOH
HOH
368
A
HOH
369
2
HOH
HOH
369
A
HOH
370
2
HOH
HOH
370
A
HOH
371
2
HOH
HOH
371
A
HOH
372
2
HOH
HOH
372
A
HOH
373
2
HOH
HOH
373
A
HOH
374
2
HOH
HOH
374
A
HOH
375
2
HOH
HOH
375
A
HOH
376
2
HOH
HOH
376
A
HOH
377
2
HOH
HOH
377
A
HOH
378
2
HOH
HOH
378
A
HOH
379
2
HOH
HOH
379
A
HOH
380
2
HOH
HOH
380
A
HOH
381
2
HOH
HOH
381
A
HOH
382
2
HOH
HOH
382
A
HOH
383
2
HOH
HOH
383
A
HOH
384
2
HOH
HOH
384
A
HOH
385
2
HOH
HOH
385
A
HOH
386
2
HOH
HOH
386
A
HOH
387
2
HOH
HOH
387
A
HOH
388
2
HOH
HOH
388
A
HOH
389
2
HOH
HOH
389
A
HOH
390
2
HOH
HOH
390
A
HOH
391
2
HOH
HOH
391
A
HOH
392
2
HOH
HOH
392
A
HOH
393
2
HOH
HOH
393
A
HOH
394
2
HOH
HOH
394
A
HOH
395
2
HOH
HOH
395
A
HOH
396
2
HOH
HOH
396
A
HOH
397
2
HOH
HOH
397
A
HOH
398
2
HOH
HOH
398
A
HOH
399
2
HOH
HOH
399
A
HOH
400
2
HOH
HOH
400
A
HOH
401
2
HOH
HOH
401
A
HOH
402
2
HOH
HOH
402
A
HOH
403
2
HOH
HOH
403
A
HOH
404
2
HOH
HOH
404
A
HOH
405
2
HOH
HOH
405
A
HOH
406
2
HOH
HOH
406
A
HOH
407
2
HOH
HOH
407
A
HOH
408
2
HOH
HOH
408
A
HOH
409
2
HOH
HOH
409
A
HOH
410
2
HOH
HOH
410
A
HOH
411
2
HOH
HOH
411
A
HOH
412
2
HOH
HOH
412
A
HOH
413
2
HOH
HOH
413
A
HOH
414
2
HOH
HOH
414
A
HOH
415
2
HOH
HOH
415
A
HOH
416
2
HOH
HOH
416
A
HOH
417
2
HOH
HOH
417
A
HOH
418
2
HOH
HOH
418
A
HOH
419
2
HOH
HOH
419
A
HOH
420
2
HOH
HOH
420
A
HOH
421
2
HOH
HOH
421
A
HOH
422
2
HOH
HOH
422
A
HOH
423
2
HOH
HOH
423
A
HOH
424
2
HOH
HOH
424
A
HOH
425
2
HOH
HOH
425
A
HOH
426
2
HOH
HOH
426
A
HOH
427
2
HOH
HOH
427
A
HOH
428
2
HOH
HOH
428
A
HOH
429
2
HOH
HOH
429
A
HOH
430
2
HOH
HOH
430
A
HOH
431
2
HOH
HOH
431
A
HOH
432
2
HOH
HOH
432
A
HOH
433
2
HOH
HOH
433
A
HOH
434
2
HOH
HOH
434
A
HOH
435
2
HOH
HOH
435
A
GLU
7
n
1
GLU
7
A
ASP
8
n
2
ASP
8
A
PRO
9
n
3
PRO
9
A
GLU
10
n
4
GLU
10
A
GLY
11
n
5
GLY
11
A
SER
12
n
6
SER
12
A
ARG
13
n
7
ARG
13
A
ILE
14
n
8
ILE
14
A
THR
15
n
9
THR
15
A
TYR
16
n
10
TYR
16
A
VAL
17
n
11
VAL
17
A
LYS
18
n
12
LYS
18
A
GLY
19
n
13
GLY
19
A
ASP
20
n
14
ASP
20
A
LEU
21
n
15
LEU
21
A
PHE
22
n
16
PHE
22
A
ALA
23
n
17
ALA
23
A
CYS
24
n
18
CYS
24
A
PRO
25
n
19
PRO
25
A
LYS
26
n
20
LYS
26
A
THR
27
n
21
THR
27
A
ASP
28
n
22
ASP
28
A
SER
29
n
23
SER
29
A
LEU
30
n
24
LEU
30
A
ALA
31
n
25
ALA
31
A
HIS
32
n
26
HIS
32
A
CYS
33
n
27
CYS
33
A
ILE
34
n
28
ILE
34
A
SER
35
n
29
SER
35
A
GLU
36
n
30
GLU
36
A
ASP
37
n
31
ASP
37
A
CYS
38
n
32
CYS
38
A
ARG
39
n
33
ARG
39
A
MET
40
n
34
MET
40
A
GLY
41
n
35
GLY
41
A
ALA
42
n
36
ALA
42
A
GLY
43
n
37
GLY
43
A
ILE
44
n
38
ILE
44
A
ALA
45
n
39
ALA
45
A
VAL
46
n
40
VAL
46
A
LEU
47
n
41
LEU
47
A
PHE
48
n
42
PHE
48
A
LYS
49
n
43
LYS
49
A
LYS
50
n
44
LYS
50
A
LYS
51
n
45
LYS
51
A
PHE
52
n
46
PHE
52
A
GLY
53
n
47
GLY
53
A
GLY
54
n
48
GLY
54
A
VAL
55
n
49
VAL
55
A
GLN
56
n
50
GLN
56
A
GLU
57
n
51
GLU
57
A
LEU
58
n
52
LEU
58
A
LEU
59
n
53
LEU
59
A
ASN
60
n
54
ASN
60
A
GLN
61
n
55
GLN
61
A
GLN
62
n
56
GLN
62
A
LYS
63
n
57
LYS
63
A
LYS
64
n
58
LYS
64
A
SER
65
n
59
SER
65
A
GLY
66
n
60
GLY
66
A
GLU
67
n
61
GLU
67
A
VAL
68
n
62
VAL
68
A
ALA
69
n
63
ALA
69
A
VAL
70
n
64
VAL
70
A
LEU
71
n
65
LEU
71
A
LYS
72
n
66
LYS
72
A
ARG
73
n
67
ARG
73
A
ASP
74
n
68
ASP
74
A
GLY
75
n
69
GLY
75
A
ARG
76
n
70
ARG
76
A
TYR
77
n
71
TYR
77
A
ILE
78
n
72
ILE
78
A
TYR
79
n
73
TYR
79
A
TYR
80
n
74
TYR
80
A
LEU
81
n
75
LEU
81
A
ILE
82
n
76
ILE
82
A
THR
83
n
77
THR
83
A
LYS
84
n
78
LYS
84
A
LYS
85
n
79
LYS
85
A
ARG
86
n
80
ARG
86
A
ALA
87
n
81
ALA
87
A
SER
88
n
82
SER
88
A
HIS
89
n
83
HIS
89
A
LYS
90
n
84
LYS
90
A
PRO
91
n
85
PRO
91
A
THR
92
n
86
THR
92
A
TYR
93
n
87
TYR
93
A
GLU
94
n
88
GLU
94
A
ASN
95
n
89
ASN
95
A
LEU
96
n
90
LEU
96
A
GLN
97
n
91
GLN
97
A
LYS
98
n
92
LYS
98
A
SER
99
n
93
SER
99
A
LEU
100
n
94
LEU
100
A
GLU
101
n
95
GLU
101
A
ALA
102
n
96
ALA
102
A
MET
103
n
97
MET
103
A
LYS
104
n
98
LYS
104
A
SER
105
n
99
SER
105
A
HIS
106
n
100
HIS
106
A
CYS
107
n
101
CYS
107
A
LEU
108
n
102
LEU
108
A
LYS
109
n
103
LYS
109
A
ASN
110
n
104
ASN
110
A
GLY
111
n
105
GLY
111
A
VAL
112
n
106
VAL
112
A
THR
113
n
107
THR
113
A
ASP
114
n
108
ASP
114
A
LEU
115
n
109
LEU
115
A
SER
116
n
110
SER
116
A
MET
117
n
111
MET
117
A
PRO
118
n
112
PRO
118
A
ARG
119
n
113
ARG
119
A
ILE
120
n
114
ILE
120
A
GLY
121
n
115
GLY
121
A
CYS
122
n
116
CYS
122
A
GLY
123
n
117
GLY
123
A
LEU
124
n
118
LEU
124
A
ASP
125
n
119
ASP
125
A
ARG
126
n
120
ARG
126
A
LEU
127
n
121
LEU
127
A
GLN
128
n
122
GLN
128
A
TRP
129
n
123
TRP
129
A
GLU
130
n
124
GLU
130
A
ASN
131
n
125
ASN
131
A
VAL
132
n
126
VAL
132
A
SER
133
n
127
SER
133
A
ALA
134
n
128
ALA
134
A
MET
135
n
129
MET
135
A
ILE
136
n
130
ILE
136
A
GLU
137
n
131
GLU
137
A
GLU
138
n
132
GLU
138
A
VAL
139
n
133
VAL
139
A
PHE
140
n
134
PHE
140
A
GLU
141
n
135
GLU
141
A
ALA
142
n
136
ALA
142
A
THR
143
n
137
THR
143
A
ASP
144
n
138
ASP
144
A
ILE
145
n
139
ILE
145
A
LYS
146
n
140
LYS
146
A
ILE
147
n
141
ILE
147
A
THR
148
n
142
THR
148
A
VAL
149
n
143
VAL
149
A
TYR
150
n
144
TYR
150
A
THR
151
n
145
THR
151
A
LEU
152
n
146
LEU
152
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
15
A
N
THR
9
A
O
VAL
149
A
O
VAL
143
A
O
LYS
146
A
O
LYS
140
A
N
LEU
115
A
N
LEU
109
A
O
SER
116
A
O
SER
110
A
N
SER
29
A
N
SER
23
A
N
LEU
30
A
N
LEU
24
A
O
TYR
79
A
O
TYR
73
A
O
TYR
80
A
O
TYR
74
A
N
ALA
69
A
N
ALA
63
1
A
HOH
262
B
HOH
1
A
HOH
304
B
HOH
1
A
HOH
434
B
HOH
22.6861
0.3295
-0.0000
0.4410
-1.5800
-0.0000
1.2505
0.1614
0.1307
0.1323
1.350
30.055
1756
35292
34392
5.11
97.14
1.000
0.150
0.10
1
1.38
MOLECULAR REPLACEMENT
18.59
0.90
1.10
pdb entry 2JYC
ML
FLAT BULK SOLVENT MODEL
1.350
30.055
235
1384
0
0
1149
0.015
1269
1.713
1724
13.268
520
0.109
194
0.010
220
0.2015
0.1777
1.3865
121
2330
91.00
0.1947
0.1616
1.4273
132
2426
95.00
0.1856
0.1401
1.4734
156
2482
97.00
0.1658
0.1336
1.5261
141
2511
97.00
0.1500
0.1112
1.5872
123
2551
97.00
0.1452
0.1082
1.6594
130
2497
98.00
0.1397
0.1064
1.7469
143
2545
99.00
0.1419
0.1073
1.8563
115
2577
99.00
0.1327
0.1030
1.9996
152
2522
99.00
0.1278
0.1025
2.2008
149
2576
99.00
0.1466
0.1181
2.5191
136
2589
100.00
0.1912
0.1409
3.1732
146
2593
100.00
0.1744
0.1564
30.0628
112
2437
92.00
1.350
50.000
4J5Q
35292
34621
1
1
0.099
1
8.800
3.500
98.100
0.445
1.350
1.400
1
2.900
96.200
0.406
1.400
1.450
1
3.200
97.800
0.334
1.450
1.520
1
3.400
98.200
0.261
1.520
1.600
1
3.500
98.600
0.211
1.600
1.700
1
3.700
98.900
0.154
1.700
1.830
1
3.700
99.200
0.120
1.830
2.020
1
3.600
99.300
0.098
2.020
2.310
1
3.600
99.600
0.083
2.310
2.910
1
3.700
99.700
0.085
2.910
50.000
1
3.300
93.800
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
program
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
program
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.8.1_1168
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
HKL-2000
phasing
PHASER
TARG1 (C6orf130), Terminal ADP-ribose Glycohydrolase 1, apo structure
1
N
N
2
N
N
A
ASP
20
A
ASP
14
HELX_P
A
CYS
24
A
CYS
18
5
1
5
A
ILE
44
A
ILE
38
HELX_P
A
GLY
53
A
GLY
47
1
2
10
A
GLY
54
A
GLY
48
HELX_P
A
GLN
61
A
GLN
55
1
3
8
A
THR
92
A
THR
86
HELX_P
A
GLY
111
A
GLY
105
1
4
20
A
CYS
122
A
CYS
116
HELX_P
A
ARG
126
A
ARG
120
5
5
5
A
GLN
128
A
GLN
122
HELX_P
A
GLU
141
A
GLU
135
1
6
14
HYDROLASE
DNA repair, cellular signalling, macro domain, glycohydrolase, poly-ADP ribose, PARP, ADP-ribose, hydrolase
OARD1_HUMAN
UNP
1
7
Q9Y530
EDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKR
ASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
7
152
4J5Q
7
152
Q9Y530
A
1
1
146
6
parallel
parallel
parallel
parallel
anti-parallel
A
ILE
14
A
ILE
8
A
LYS
18
A
LYS
12
A
LYS
146
A
LYS
140
A
THR
151
A
THR
145
A
ASP
114
A
ASP
108
A
MET
117
A
MET
111
A
SER
29
A
SER
23
A
SER
35
A
SER
29
A
ARG
76
A
ARG
70
A
LYS
84
A
LYS
78
A
GLU
67
A
GLU
61
A
ARG
73
A
ARG
67
5
C 1 2 1