0.011936
0.000000
0.000000
0.000000
0.011936
0.000000
0.000000
0.000000
0.005014
0.00000
0.00000
0.00000
Humm, A.
Fritsche, E.
Steinbacher, S.
Huber, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
83.780
83.780
199.450
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
16
3373
3385
10.1093/emboj/16.12.3373
9218780
Crystal structure and mechanism of human L-arginine:glycine amidinotransferase: a mitochondrial enzyme involved in creatine biosynthesis.
1997
GW
Biol.Chem.Hoppe-Seyler
BCHSEI
0858
0177-3593
378
193
Structure and Reaction Mechanism of L-Arginine:Glycine Amidinotransferase
1997
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
247
483
Substrate Binding and Catalysis by L-Arginine:Glycine Amidinotransferase--A Mutagenesis and Crystallographic Study
1997
UK
Biochem.J.
BIJOAK
0043
0264-6021
322
771
Recombinant Expression and Isolation of Human L-Arginine:Glycine Amidinotransferase and Identification of its Active-Site Cysteine Residue
1997
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
270
616
Bioincorporation of Telluromethionine Into Proteins: A Promising New Approach for X-Ray Structure Analysis of Proteins
1997
10.2210/pdb4jdw/pdb
pdb_00004jdw
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
290
1
IMAGE PLATE
1995-12
MARRESEARCH
GRAPHITE(002)
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
48489.305
L-ARGININE\:GLYCINE AMIDINOTRANSFERASE
2.1.4.1
RESIDUES 64 - 423
WITHOUT SIGNAL SEQUENCE (1-37) BUT WITH N-TERMINAL ATTACHED 6-HISTIDINE-TAG (14 RESIDUES), C407A
1
man
polymer
175.209
ARGININE
1
syn
non-polymer
18.015
water
195
nat
water
TRANSAMIDINASE, AT38
no
no
MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIV
GRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFES
TGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA
QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNP
DRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANS
LGGGFHAWTCDVRRRGTLQSYLD
MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIV
GRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFES
TGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA
QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNP
DRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANS
LGGGFHAWTCDVRRRGTLQSYLD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
BL21
INTERMEMBRANE SPACE OF MITOCHONDRIA AND CYTOPLASM
AT38H
9606
KIDNEY
MITOCHONDRIA
Homo sapiens
CYTOSOLIC
AT38H
562
Escherichia coli
BL21 (DE3) PLYSS
PRSET
PBLUESCRIPT DERIVATIVE WITH T7 EXPRESSION ELEMENTS
PRSETAT38H
1
3.8
65.
7.0
1 PART OF AT38H (13-16 MG/ML) 2 PARTS OF PRECIPITANT (3% PEG 6000, 40 MM HEPES, 1MM GLUTATHIONE, PH7.0), SEVERAL DAYS AT ROOM TEMPERATURE, MACRO SEEDING.
L-ARGININE WAS SOAKED INTO CRYSTAL AND IS BOUND TO ACTIVE
SITE.
room temp
database_2
software
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Refinement description
Refinement description
Data collection
1
0
1998-01-28
1
1
2008-03-25
1
2
2011-07-13
1
3
2021-11-03
1
4
2023-08-09
1
5
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_software.name
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1997-01-24
REL
ARG
ARGININE
HOH
water
1JDW
PDB ENTRY 1JDW
PDB
experimental model
ARG
500
2
ARG
ARG
500
A
HOH
1
3
HOH
HOH
501
A
HOH
2
3
HOH
HOH
502
A
HOH
3
3
HOH
HOH
503
A
HOH
4
3
HOH
HOH
504
A
HOH
5
3
HOH
HOH
505
A
HOH
6
3
HOH
HOH
506
A
HOH
7
3
HOH
HOH
507
A
HOH
8
3
HOH
HOH
508
A
HOH
9
3
HOH
HOH
509
A
HOH
10
3
HOH
HOH
510
A
HOH
11
3
HOH
HOH
511
A
HOH
12
3
HOH
HOH
512
A
HOH
13
3
HOH
HOH
513
A
HOH
14
3
HOH
HOH
514
A
HOH
15
3
HOH
HOH
515
A
HOH
16
3
HOH
HOH
516
A
HOH
17
3
HOH
HOH
517
A
HOH
18
3
HOH
HOH
518
A
HOH
19
3
HOH
HOH
519
A
HOH
20
3
HOH
HOH
520
A
HOH
21
3
HOH
HOH
521
A
HOH
22
3
HOH
HOH
522
A
HOH
23
3
HOH
HOH
523
A
HOH
24
3
HOH
HOH
524
A
HOH
25
3
HOH
HOH
525
A
HOH
26
3
HOH
HOH
526
A
HOH
27
3
HOH
HOH
527
A
HOH
28
3
HOH
HOH
528
A
HOH
29
3
HOH
HOH
529
A
HOH
30
3
HOH
HOH
530
A
HOH
31
3
HOH
HOH
531
A
HOH
32
3
HOH
HOH
532
A
HOH
33
3
HOH
HOH
533
A
HOH
34
3
HOH
HOH
534
A
HOH
35
3
HOH
HOH
535
A
HOH
36
3
HOH
HOH
536
A
HOH
37
3
HOH
HOH
537
A
HOH
38
3
HOH
HOH
538
A
HOH
39
3
HOH
HOH
539
A
HOH
40
3
HOH
HOH
540
A
HOH
41
3
HOH
HOH
541
A
HOH
42
3
HOH
HOH
542
A
HOH
43
3
HOH
HOH
543
A
HOH
44
3
HOH
HOH
544
A
HOH
45
3
HOH
HOH
545
A
HOH
46
3
HOH
HOH
546
A
HOH
47
3
HOH
HOH
547
A
HOH
48
3
HOH
HOH
548
A
HOH
49
3
HOH
HOH
549
A
HOH
51
3
HOH
HOH
550
A
HOH
52
3
HOH
HOH
551
A
HOH
53
3
HOH
HOH
552
A
HOH
54
3
HOH
HOH
553
A
HOH
55
3
HOH
HOH
554
A
HOH
56
3
HOH
HOH
555
A
HOH
57
3
HOH
HOH
556
A
HOH
58
3
HOH
HOH
557
A
HOH
59
3
HOH
HOH
558
A
HOH
60
3
HOH
HOH
559
A
HOH
61
3
HOH
HOH
560
A
HOH
62
3
HOH
HOH
561
A
HOH
63
3
HOH
HOH
562
A
HOH
64
3
HOH
HOH
563
A
HOH
65
3
HOH
HOH
564
A
HOH
66
3
HOH
HOH
565
A
HOH
67
3
HOH
HOH
566
A
HOH
68
3
HOH
HOH
567
A
HOH
69
3
HOH
HOH
568
A
HOH
70
3
HOH
HOH
569
A
HOH
71
3
HOH
HOH
570
A
HOH
72
3
HOH
HOH
571
A
HOH
73
3
HOH
HOH
572
A
HOH
74
3
HOH
HOH
573
A
HOH
75
3
HOH
HOH
574
A
HOH
76
3
HOH
HOH
575
A
HOH
77
3
HOH
HOH
576
A
HOH
78
3
HOH
HOH
577
A
HOH
79
3
HOH
HOH
578
A
HOH
80
3
HOH
HOH
579
A
HOH
81
3
HOH
HOH
580
A
HOH
82
3
HOH
HOH
581
A
HOH
83
3
HOH
HOH
582
A
HOH
84
3
HOH
HOH
583
A
HOH
85
3
HOH
HOH
584
A
HOH
86
3
HOH
HOH
585
A
HOH
87
3
HOH
HOH
586
A
HOH
88
3
HOH
HOH
587
A
HOH
89
3
HOH
HOH
588
A
HOH
90
3
HOH
HOH
589
A
HOH
91
3
HOH
HOH
590
A
HOH
92
3
HOH
HOH
591
A
HOH
93
3
HOH
HOH
592
A
HOH
95
3
HOH
HOH
593
A
HOH
97
3
HOH
HOH
594
A
HOH
98
3
HOH
HOH
595
A
HOH
99
3
HOH
HOH
596
A
HOH
100
3
HOH
HOH
597
A
HOH
101
3
HOH
HOH
598
A
HOH
102
3
HOH
HOH
599
A
HOH
103
3
HOH
HOH
600
A
HOH
104
3
HOH
HOH
601
A
HOH
105
3
HOH
HOH
602
A
HOH
106
3
HOH
HOH
603
A
HOH
107
3
HOH
HOH
604
A
HOH
108
3
HOH
HOH
605
A
HOH
109
3
HOH
HOH
606
A
HOH
110
3
HOH
HOH
607
A
HOH
111
3
HOH
HOH
608
A
HOH
112
3
HOH
HOH
609
A
HOH
113
3
HOH
HOH
610
A
HOH
114
3
HOH
HOH
611
A
HOH
115
3
HOH
HOH
612
A
HOH
116
3
HOH
HOH
613
A
HOH
117
3
HOH
HOH
614
A
HOH
118
3
HOH
HOH
615
A
HOH
119
3
HOH
HOH
616
A
HOH
120
3
HOH
HOH
617
A
HOH
121
3
HOH
HOH
618
A
HOH
122
3
HOH
HOH
619
A
HOH
123
3
HOH
HOH
620
A
HOH
124
3
HOH
HOH
621
A
HOH
125
3
HOH
HOH
622
A
HOH
126
3
HOH
HOH
623
A
HOH
127
3
HOH
HOH
624
A
HOH
130
3
HOH
HOH
625
A
HOH
131
3
HOH
HOH
626
A
HOH
132
3
HOH
HOH
627
A
HOH
134
3
HOH
HOH
628
A
HOH
135
3
HOH
HOH
629
A
HOH
136
3
HOH
HOH
630
A
HOH
137
3
HOH
HOH
631
A
HOH
138
3
HOH
HOH
632
A
HOH
139
3
HOH
HOH
633
A
HOH
140
3
HOH
HOH
634
A
HOH
141
3
HOH
HOH
635
A
HOH
142
3
HOH
HOH
636
A
HOH
143
3
HOH
HOH
637
A
HOH
144
3
HOH
HOH
638
A
HOH
146
3
HOH
HOH
639
A
HOH
147
3
HOH
HOH
640
A
HOH
148
3
HOH
HOH
641
A
HOH
150
3
HOH
HOH
642
A
HOH
151
3
HOH
HOH
643
A
HOH
152
3
HOH
HOH
644
A
HOH
153
3
HOH
HOH
645
A
HOH
154
3
HOH
HOH
646
A
HOH
156
3
HOH
HOH
647
A
HOH
157
3
HOH
HOH
648
A
HOH
158
3
HOH
HOH
649
A
HOH
159
3
HOH
HOH
650
A
HOH
160
3
HOH
HOH
651
A
HOH
161
3
HOH
HOH
652
A
HOH
164
3
HOH
HOH
653
A
HOH
165
3
HOH
HOH
654
A
HOH
166
3
HOH
HOH
655
A
HOH
167
3
HOH
HOH
656
A
HOH
168
3
HOH
HOH
657
A
HOH
169
3
HOH
HOH
658
A
HOH
170
3
HOH
HOH
659
A
HOH
172
3
HOH
HOH
660
A
HOH
173
3
HOH
HOH
661
A
HOH
174
3
HOH
HOH
662
A
HOH
175
3
HOH
HOH
663
A
HOH
176
3
HOH
HOH
664
A
HOH
177
3
HOH
HOH
665
A
HOH
179
3
HOH
HOH
666
A
HOH
182
3
HOH
HOH
667
A
HOH
183
3
HOH
HOH
668
A
HOH
184
3
HOH
HOH
669
A
HOH
185
3
HOH
HOH
670
A
HOH
186
3
HOH
HOH
671
A
HOH
187
3
HOH
HOH
672
A
HOH
190
3
HOH
HOH
673
A
HOH
191
3
HOH
HOH
674
A
HOH
192
3
HOH
HOH
675
A
HOH
193
3
HOH
HOH
676
A
HOH
196
3
HOH
HOH
677
A
HOH
197
3
HOH
HOH
678
A
HOH
198
3
HOH
HOH
679
A
HOH
200
3
HOH
HOH
680
A
HOH
202
3
HOH
HOH
681
A
HOH
205
3
HOH
HOH
682
A
HOH
206
3
HOH
HOH
683
A
HOH
208
3
HOH
HOH
684
A
HOH
209
3
HOH
HOH
685
A
HOH
210
3
HOH
HOH
686
A
HOH
211
3
HOH
HOH
687
A
HOH
213
3
HOH
HOH
688
A
HOH
215
3
HOH
HOH
689
A
HOH
216
3
HOH
HOH
690
A
HOH
217
3
HOH
HOH
691
A
HOH
218
3
HOH
HOH
692
A
HOH
220
3
HOH
HOH
693
A
HOH
221
3
HOH
HOH
694
A
HOH
224
3
HOH
HOH
695
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
n
15
15
A
n
16
16
A
n
17
17
A
n
18
18
A
n
19
19
A
n
20
20
A
n
21
21
A
n
22
22
A
n
23
23
A
n
24
24
A
n
25
25
A
n
26
26
A
n
27
27
A
n
28
28
A
n
29
29
A
n
30
30
A
n
31
31
A
n
32
32
A
n
33
33
A
n
34
34
A
n
35
35
A
n
36
36
A
n
37
37
A
n
38
38
A
n
39
39
A
n
40
40
A
n
41
41
A
n
42
42
A
n
43
43
A
n
44
44
A
n
45
45
A
n
46
46
A
n
47
47
A
n
48
48
A
n
49
49
A
n
50
50
A
n
51
51
A
n
52
52
A
n
53
53
A
n
54
54
A
n
55
55
A
n
56
56
A
n
57
57
A
n
58
58
A
n
59
59
A
n
60
60
A
n
61
61
A
n
62
62
A
n
63
63
A
CYS
64
n
64
CYS
64
A
PRO
65
n
65
PRO
65
A
VAL
66
n
66
VAL
66
A
SER
67
n
67
SER
67
A
SER
68
n
68
SER
68
A
TYR
69
n
69
TYR
69
A
ASN
70
n
70
ASN
70
A
GLU
71
n
71
GLU
71
A
TRP
72
n
72
TRP
72
A
ASP
73
n
73
ASP
73
A
PRO
74
n
74
PRO
74
A
LEU
75
n
75
LEU
75
A
GLU
76
n
76
GLU
76
A
GLU
77
n
77
GLU
77
A
VAL
78
n
78
VAL
78
A
ILE
79
n
79
ILE
79
A
VAL
80
n
80
VAL
80
A
GLY
81
n
81
GLY
81
A
ARG
82
n
82
ARG
82
A
ALA
83
n
83
ALA
83
A
GLU
84
n
84
GLU
84
A
ASN
85
n
85
ASN
85
A
ALA
86
n
86
ALA
86
A
CYS
87
n
87
CYS
87
A
VAL
88
n
88
VAL
88
A
PRO
89
n
89
PRO
89
A
PRO
90
n
90
PRO
90
A
PHE
91
n
91
PHE
91
A
THR
92
n
92
THR
92
A
ILE
93
n
93
ILE
93
A
GLU
94
n
94
GLU
94
A
VAL
95
n
95
VAL
95
A
LYS
96
n
96
LYS
96
A
ALA
97
n
97
ALA
97
A
ASN
98
n
98
ASN
98
A
THR
99
n
99
THR
99
A
TYR
100
n
100
TYR
100
A
GLU
101
n
101
GLU
101
A
LYS
102
n
102
LYS
102
A
TYR
103
n
103
TYR
103
A
TRP
104
n
104
TRP
104
A
PRO
105
n
105
PRO
105
A
PHE
106
n
106
PHE
106
A
TYR
107
n
107
TYR
107
A
GLN
108
n
108
GLN
108
A
LYS
109
n
109
LYS
109
A
GLN
110
n
110
GLN
110
A
GLY
111
n
111
GLY
111
A
GLY
112
n
112
GLY
112
A
HIS
113
n
113
HIS
113
A
TYR
114
n
114
TYR
114
A
PHE
115
n
115
PHE
115
A
PRO
116
n
116
PRO
116
A
LYS
117
n
117
LYS
117
A
ASP
118
n
118
ASP
118
A
HIS
119
n
119
HIS
119
A
LEU
120
n
120
LEU
120
A
LYS
121
n
121
LYS
121
A
LYS
122
n
122
LYS
122
A
ALA
123
n
123
ALA
123
A
VAL
124
n
124
VAL
124
A
ALA
125
n
125
ALA
125
A
GLU
126
n
126
GLU
126
A
ILE
127
n
127
ILE
127
A
GLU
128
n
128
GLU
128
A
GLU
129
n
129
GLU
129
A
MET
130
n
130
MET
130
A
CYS
131
n
131
CYS
131
A
ASN
132
n
132
ASN
132
A
ILE
133
n
133
ILE
133
A
LEU
134
n
134
LEU
134
A
LYS
135
n
135
LYS
135
A
THR
136
n
136
THR
136
A
GLU
137
n
137
GLU
137
A
GLY
138
n
138
GLY
138
A
VAL
139
n
139
VAL
139
A
THR
140
n
140
THR
140
A
VAL
141
n
141
VAL
141
A
ARG
142
n
142
ARG
142
A
ARG
143
n
143
ARG
143
A
PRO
144
n
144
PRO
144
A
ASP
145
n
145
ASP
145
A
PRO
146
n
146
PRO
146
A
ILE
147
n
147
ILE
147
A
ASP
148
n
148
ASP
148
A
TRP
149
n
149
TRP
149
A
SER
150
n
150
SER
150
A
LEU
151
n
151
LEU
151
A
LYS
152
n
152
LYS
152
A
TYR
153
n
153
TYR
153
A
LYS
154
n
154
LYS
154
A
THR
155
n
155
THR
155
A
PRO
156
n
156
PRO
156
A
ASP
157
n
157
ASP
157
A
PHE
158
n
158
PHE
158
A
GLU
159
n
159
GLU
159
A
SER
160
n
160
SER
160
A
THR
161
n
161
THR
161
A
GLY
162
n
162
GLY
162
A
LEU
163
n
163
LEU
163
A
TYR
164
n
164
TYR
164
A
SER
165
n
165
SER
165
A
ALA
166
n
166
ALA
166
A
MET
167
n
167
MET
167
A
PRO
168
n
168
PRO
168
A
ARG
169
n
169
ARG
169
A
ASP
170
n
170
ASP
170
A
ILE
171
n
171
ILE
171
A
LEU
172
n
172
LEU
172
A
ILE
173
n
173
ILE
173
A
VAL
174
n
174
VAL
174
A
VAL
175
n
175
VAL
175
A
GLY
176
n
176
GLY
176
A
ASN
177
n
177
ASN
177
A
GLU
178
n
178
GLU
178
A
ILE
179
n
179
ILE
179
A
ILE
180
n
180
ILE
180
A
GLU
181
n
181
GLU
181
A
ALA
182
n
182
ALA
182
A
PRO
183
n
183
PRO
183
A
MET
184
n
184
MET
184
A
ALA
185
n
185
ALA
185
A
TRP
186
n
186
TRP
186
A
ARG
187
n
187
ARG
187
A
SER
188
n
188
SER
188
A
ARG
189
n
189
ARG
189
A
PHE
190
n
190
PHE
190
A
PHE
191
n
191
PHE
191
A
GLU
192
n
192
GLU
192
A
TYR
193
n
193
TYR
193
A
ARG
194
n
194
ARG
194
A
ALA
195
n
195
ALA
195
A
TYR
196
n
196
TYR
196
A
ARG
197
n
197
ARG
197
A
SER
198
n
198
SER
198
A
ILE
199
n
199
ILE
199
A
ILE
200
n
200
ILE
200
A
LYS
201
n
201
LYS
201
A
ASP
202
n
202
ASP
202
A
TYR
203
n
203
TYR
203
A
PHE
204
n
204
PHE
204
A
HIS
205
n
205
HIS
205
A
ARG
206
n
206
ARG
206
A
GLY
207
n
207
GLY
207
A
ALA
208
n
208
ALA
208
A
LYS
209
n
209
LYS
209
A
TRP
210
n
210
TRP
210
A
THR
211
n
211
THR
211
A
THR
212
n
212
THR
212
A
ALA
213
n
213
ALA
213
A
PRO
214
n
214
PRO
214
A
LYS
215
n
215
LYS
215
A
PRO
216
n
216
PRO
216
A
THR
217
n
217
THR
217
A
MET
218
n
218
MET
218
A
ALA
219
n
219
ALA
219
A
ASP
220
n
220
ASP
220
A
GLU
221
n
221
GLU
221
A
LEU
222
n
222
LEU
222
A
TYR
223
n
223
TYR
223
A
ASN
224
n
224
ASN
224
A
GLN
225
n
225
GLN
225
A
ASP
226
n
226
ASP
226
A
TYR
227
n
227
TYR
227
A
PRO
228
n
228
PRO
228
A
ILE
229
n
229
ILE
229
A
HIS
230
n
230
HIS
230
A
SER
231
n
231
SER
231
A
VAL
232
n
232
VAL
232
A
GLU
233
n
233
GLU
233
A
ASP
234
n
234
ASP
234
A
ARG
235
n
235
ARG
235
A
HIS
236
n
236
HIS
236
A
LYS
237
n
237
LYS
237
A
LEU
238
n
238
LEU
238
A
ALA
239
n
239
ALA
239
A
ALA
240
n
240
ALA
240
A
GLN
241
n
241
GLN
241
A
GLY
242
n
242
GLY
242
A
LYS
243
n
243
LYS
243
A
PHE
244
n
244
PHE
244
A
VAL
245
n
245
VAL
245
A
THR
246
n
246
THR
246
A
THR
247
n
247
THR
247
A
GLU
248
n
248
GLU
248
A
PHE
249
n
249
PHE
249
A
GLU
250
n
250
GLU
250
A
PRO
251
n
251
PRO
251
A
CYS
252
n
252
CYS
252
A
PHE
253
n
253
PHE
253
A
ASP
254
n
254
ASP
254
A
ALA
255
n
255
ALA
255
A
ALA
256
n
256
ALA
256
A
ASP
257
n
257
ASP
257
A
PHE
258
n
258
PHE
258
A
ILE
259
n
259
ILE
259
A
ARG
260
n
260
ARG
260
A
ALA
261
n
261
ALA
261
A
GLY
262
n
262
GLY
262
A
ARG
263
n
263
ARG
263
A
ASP
264
n
264
ASP
264
A
ILE
265
n
265
ILE
265
A
PHE
266
n
266
PHE
266
A
ALA
267
n
267
ALA
267
A
GLN
268
n
268
GLN
268
A
ARG
269
n
269
ARG
269
A
SER
270
n
270
SER
270
A
GLN
271
n
271
GLN
271
A
VAL
272
n
272
VAL
272
A
THR
273
n
273
THR
273
A
ASN
274
n
274
ASN
274
A
TYR
275
n
275
TYR
275
A
LEU
276
n
276
LEU
276
A
GLY
277
n
277
GLY
277
A
ILE
278
n
278
ILE
278
A
GLU
279
n
279
GLU
279
A
TRP
280
n
280
TRP
280
A
MET
281
n
281
MET
281
A
ARG
282
n
282
ARG
282
A
ARG
283
n
283
ARG
283
A
HIS
284
n
284
HIS
284
A
LEU
285
n
285
LEU
285
A
ALA
286
n
286
ALA
286
A
PRO
287
n
287
PRO
287
A
ASP
288
n
288
ASP
288
A
TYR
289
n
289
TYR
289
A
ARG
290
n
290
ARG
290
A
VAL
291
n
291
VAL
291
A
HIS
292
n
292
HIS
292
A
ILE
293
n
293
ILE
293
A
ILE
294
n
294
ILE
294
A
SER
295
n
295
SER
295
A
PHE
296
n
296
PHE
296
A
LYS
297
n
297
LYS
297
A
ASP
298
n
298
ASP
298
A
PRO
299
n
299
PRO
299
A
ASN
300
n
300
ASN
300
A
PRO
301
n
301
PRO
301
A
MET
302
n
302
MET
302
A
HIS
303
n
303
HIS
303
A
ILE
304
n
304
ILE
304
A
ASP
305
n
305
ASP
305
A
ALA
306
n
306
ALA
306
A
THR
307
n
307
THR
307
A
PHE
308
n
308
PHE
308
A
ASN
309
n
309
ASN
309
A
ILE
310
n
310
ILE
310
A
ILE
311
n
311
ILE
311
A
GLY
312
n
312
GLY
312
A
PRO
313
n
313
PRO
313
A
GLY
314
n
314
GLY
314
A
ILE
315
n
315
ILE
315
A
VAL
316
n
316
VAL
316
A
LEU
317
n
317
LEU
317
A
SER
318
n
318
SER
318
A
ASN
319
n
319
ASN
319
A
PRO
320
n
320
PRO
320
A
ASP
321
n
321
ASP
321
A
ARG
322
n
322
ARG
322
A
PRO
323
n
323
PRO
323
A
CYS
324
n
324
CYS
324
A
HIS
325
n
325
HIS
325
A
GLN
326
n
326
GLN
326
A
ILE
327
n
327
ILE
327
A
ASP
328
n
328
ASP
328
A
LEU
329
n
329
LEU
329
A
PHE
330
n
330
PHE
330
A
LYS
331
n
331
LYS
331
A
LYS
332
n
332
LYS
332
A
ALA
333
n
333
ALA
333
A
GLY
334
n
334
GLY
334
A
TRP
335
n
335
TRP
335
A
THR
336
n
336
THR
336
A
ILE
337
n
337
ILE
337
A
ILE
338
n
338
ILE
338
A
THR
339
n
339
THR
339
A
PRO
340
n
340
PRO
340
A
PRO
341
n
341
PRO
341
A
THR
342
n
342
THR
342
A
PRO
343
n
343
PRO
343
A
ILE
344
n
344
ILE
344
A
ILE
345
n
345
ILE
345
A
PRO
346
n
346
PRO
346
A
ASP
347
n
347
ASP
347
A
ASP
348
n
348
ASP
348
A
HIS
349
n
349
HIS
349
A
PRO
350
n
350
PRO
350
A
LEU
351
n
351
LEU
351
A
TRP
352
n
352
TRP
352
A
MET
353
n
353
MET
353
A
SER
354
n
354
SER
354
A
SER
355
n
355
SER
355
A
LYS
356
n
356
LYS
356
A
TRP
357
n
357
TRP
357
A
LEU
358
n
358
LEU
358
A
SER
359
n
359
SER
359
A
MET
360
n
360
MET
360
A
ASN
361
n
361
ASN
361
A
VAL
362
n
362
VAL
362
A
LEU
363
n
363
LEU
363
A
MET
364
n
364
MET
364
A
LEU
365
n
365
LEU
365
A
ASP
366
n
366
ASP
366
A
GLU
367
n
367
GLU
367
A
LYS
368
n
368
LYS
368
A
ARG
369
n
369
ARG
369
A
VAL
370
n
370
VAL
370
A
MET
371
n
371
MET
371
A
VAL
372
n
372
VAL
372
A
ASP
373
n
373
ASP
373
A
ALA
374
n
374
ALA
374
A
ASN
375
n
375
ASN
375
A
GLU
376
n
376
GLU
376
A
VAL
377
n
377
VAL
377
A
PRO
378
n
378
PRO
378
A
ILE
379
n
379
ILE
379
A
GLN
380
n
380
GLN
380
A
LYS
381
n
381
LYS
381
A
MET
382
n
382
MET
382
A
PHE
383
n
383
PHE
383
A
GLU
384
n
384
GLU
384
A
LYS
385
n
385
LYS
385
A
LEU
386
n
386
LEU
386
A
GLY
387
n
387
GLY
387
A
ILE
388
n
388
ILE
388
A
THR
389
n
389
THR
389
A
THR
390
n
390
THR
390
A
ILE
391
n
391
ILE
391
A
LYS
392
n
392
LYS
392
A
VAL
393
n
393
VAL
393
A
ASN
394
n
394
ASN
394
A
ILE
395
n
395
ILE
395
A
ARG
396
n
396
ARG
396
A
ASN
397
n
397
ASN
397
A
ALA
398
n
398
ALA
398
A
ASN
399
n
399
ASN
399
A
SER
400
n
400
SER
400
A
LEU
401
n
401
LEU
401
A
GLY
402
n
402
GLY
402
A
GLY
403
n
403
GLY
403
A
GLY
404
n
404
GLY
404
A
PHE
405
n
405
PHE
405
A
HIS
406
n
406
HIS
406
A
ALA
407
n
407
ALA
407
A
TRP
408
n
408
TRP
408
A
THR
409
n
409
THR
409
A
CYS
410
n
410
CYS
410
A
ASP
411
n
411
ASP
411
A
VAL
412
n
412
VAL
412
A
ARG
413
n
413
ARG
413
A
ARG
414
n
414
ARG
414
A
ARG
415
n
415
ARG
415
A
GLY
416
n
416
GLY
416
A
THR
417
n
417
THR
417
A
LEU
418
n
418
LEU
418
A
GLN
419
n
419
GLN
419
A
SER
420
n
420
SER
420
A
TYR
421
n
421
TYR
421
A
LEU
422
n
422
LEU
422
A
ASP
423
n
423
ASP
423
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
140
A
O
THR
140
A
N
VAL
78
A
N
VAL
78
A
O
ILE
79
A
O
ILE
79
A
N
CYS
410
A
N
CYS
410
A
O
TYR
153
A
O
TYR
153
A
N
SER
160
A
N
SER
160
A
O
ILE
173
A
O
ILE
173
A
N
ILE
180
A
N
ILE
180
A
O
ILE
179
A
O
ILE
179
A
N
LYS
209
A
N
LYS
209
A
O
ILE
259
A
O
ILE
259
A
N
PHE
266
A
N
PHE
266
A
O
ILE
265
A
O
ILE
265
A
N
ARG
290
A
N
ARG
290
A
O
THR
336
A
O
THR
336
A
N
VAL
316
A
N
VAL
316
A
O
ILE
315
A
O
ILE
315
A
N
GLY
312
A
N
GLY
312
A
O
THR
389
A
O
THR
389
A
N
VAL
370
A
N
VAL
370
A
O
ARG
369
A
O
ARG
369
A
N
ASP
366
A
N
ASP
366
A
O
PRO
74
A
O
PRO
74
A
N
ARG
415
A
N
ARG
415
1
A
MET
1
A
MET
1
1
Y
1
A
LEU
2
A
LEU
2
1
Y
1
A
ARG
3
A
ARG
3
1
Y
1
A
VAL
4
A
VAL
4
1
Y
1
A
ARG
5
A
ARG
5
1
Y
1
A
CYS
6
A
CYS
6
1
Y
1
A
LEU
7
A
LEU
7
1
Y
1
A
ARG
8
A
ARG
8
1
Y
1
A
GLY
9
A
GLY
9
1
Y
1
A
GLY
10
A
GLY
10
1
Y
1
A
SER
11
A
SER
11
1
Y
1
A
ARG
12
A
ARG
12
1
Y
1
A
GLY
13
A
GLY
13
1
Y
1
A
ALA
14
A
ALA
14
1
Y
1
A
GLU
15
A
GLU
15
1
Y
1
A
ALA
16
A
ALA
16
1
Y
1
A
VAL
17
A
VAL
17
1
Y
1
A
HIS
18
A
HIS
18
1
Y
1
A
TYR
19
A
TYR
19
1
Y
1
A
ILE
20
A
ILE
20
1
Y
1
A
GLY
21
A
GLY
21
1
Y
1
A
SER
22
A
SER
22
1
Y
1
A
ARG
23
A
ARG
23
1
Y
1
A
LEU
24
A
LEU
24
1
Y
1
A
GLY
25
A
GLY
25
1
Y
1
A
ARG
26
A
ARG
26
1
Y
1
A
THR
27
A
THR
27
1
Y
1
A
LEU
28
A
LEU
28
1
Y
1
A
THR
29
A
THR
29
1
Y
1
A
GLY
30
A
GLY
30
1
Y
1
A
TRP
31
A
TRP
31
1
Y
1
A
VAL
32
A
VAL
32
1
Y
1
A
GLN
33
A
GLN
33
1
Y
1
A
ARG
34
A
ARG
34
1
Y
1
A
THR
35
A
THR
35
1
Y
1
A
PHE
36
A
PHE
36
1
Y
1
A
GLN
37
A
GLN
37
1
Y
1
A
SER
38
A
SER
38
1
Y
1
A
THR
39
A
THR
39
1
Y
1
A
GLN
40
A
GLN
40
1
Y
1
A
ALA
41
A
ALA
41
1
Y
1
A
ALA
42
A
ALA
42
1
Y
1
A
THR
43
A
THR
43
1
Y
1
A
ALA
44
A
ALA
44
1
Y
1
A
SER
45
A
SER
45
1
Y
1
A
SER
46
A
SER
46
1
Y
1
A
ARG
47
A
ARG
47
1
Y
1
A
ASN
48
A
ASN
48
1
Y
1
A
SER
49
A
SER
49
1
Y
1
A
CYS
50
A
CYS
50
1
Y
1
A
ALA
51
A
ALA
51
1
Y
1
A
ALA
52
A
ALA
52
1
Y
1
A
ASP
53
A
ASP
53
1
Y
1
A
ASP
54
A
ASP
54
1
Y
1
A
LYS
55
A
LYS
55
1
Y
1
A
ALA
56
A
ALA
56
1
Y
1
A
THR
57
A
THR
57
1
Y
1
A
GLU
58
A
GLU
58
1
Y
1
A
PRO
59
A
PRO
59
1
Y
1
A
LEU
60
A
LEU
60
1
Y
1
A
PRO
61
A
PRO
61
1
Y
1
A
LYS
62
A
LYS
62
1
Y
1
A
ASP
63
A
ASP
63
1
Y
1
A
A
HH21
H2
ARG
HOH
269
613
1.18
1
A
A
HH11
H1
ARG
HOH
142
681
1.27
1
A
A
HH22
H1
ARG
HOH
143
533
1.32
1
A
A
H
HE21
SER
GLN
295
326
1.32
1
A
A
HG
HH12
SER
ARG
68
260
1.34
1
A
A
H2
O
HOH
HOH
509
516
1.60
1
A
SER
67
-171.69
97.23
1
A
ASN
85
58.40
18.63
1
A
PRO
116
-37.88
111.28
1
A
LEU
163
-110.94
-82.54
1
A
MET
184
84.68
171.16
1
A
PRO
228
-67.31
54.87
1
A
ILE
229
-56.39
-95.76
1
A
HIS
230
-4.64
-31.82
1
A
SER
231
139.88
120.12
1
A
VAL
232
-151.64
-25.80
1
A
GLU
233
55.49
-24.82
1
A
PHE
244
-132.51
-159.97
1
A
SER
270
-123.23
-165.10
1
A
ASP
298
-165.28
117.08
1
A
ASN
300
-154.75
65.85
1
A
MET
302
-161.51
105.77
1
A
HIS
303
79.41
145.82
1
A
THR
307
-135.41
-45.40
1
A
PRO
313
-65.27
98.04
1
A
TRP
357
-64.90
15.16
23.58
RESIDUES 38 - 63 ARE NOT VISIBLE IN THE ELECTRON DENSITY
0.183
0.183
2.50
8.0
21405
87.2
1
FREE R
0.
ISOMORPHOUS WITH PDB ENTRY 1JDW
PDB ENTRY 1JDW
2.50
8.0
194
3145
11
0
2940
0.012
1.684
25.30
1.54
0.261
2.53
656
30
81.3
2.50
8.0
4JDW
22282
0.
0.081
1
3.76
87.2
0.261
2.50
2.53
3.7
81.3
data reduction
MOSFLM
5.23
data reduction
ROTAVATA/AGROVATA
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data scaling
CCP4
(AGROVATA
data scaling
ROTAVATA
phasing
X-PLOR
3.1
CRYSTAL STRUCTURE AND MECHANISM OF L-ARGININE: GLYCINE AMIDINOTRANSFERASE: A MITOCHONDRIAL ENZYME INVOLVED IN CREATINE BIOSYNTHESIS
1
N
N
2
N
N
3
N
N
A
ILE
93
A
ILE
93
HELX_P
A
ASN
98
A
ASN
98
1
1
6
A
GLU
101
A
GLU
101
HELX_P
A
GLN
110
A
GLN
110
5
2
10
A
LYS
117
A
LYS
117
HELX_P
A
THR
136
A
THR
136
1
3
20
A
PRO
168
A
PRO
168
HELX_P
A
ILE
171
A
ILE
171
1
4
4
A
ARG
187
A
ARG
187
HELX_P
A
ARG
189
A
ARG
189
5
5
3
A
GLU
192
A
GLU
192
HELX_P
A
HIS
205
A
HIS
205
5
6
14
A
ASP
220
A
ASP
220
HELX_P
A
LEU
222
A
LEU
222
5
7
3
A
ASP
234
A
ASP
234
HELX_P
A
GLN
241
A
GLN
241
5
8
8
A
ALA
255
A
ALA
255
HELX_P
A
ASP
257
A
ASP
257
5
9
3
A
TYR
275
A
TYR
275
HELX_P
A
LEU
285
A
LEU
285
1
10
11
A
ILE
327
A
ILE
327
HELX_P
A
LYS
332
A
LYS
332
1
11
6
A
TRP
357
A
TRP
357
HELX_P
A
MET
360
A
MET
360
5
12
4
A
VAL
377
A
VAL
377
HELX_P
A
LYS
385
A
LYS
385
1
13
9
A
ALA
398
A
ALA
398
HELX_P
A
LEU
401
A
LEU
401
5
14
4
A
PHE
405
A
PHE
405
HELX_P
A
TRP
408
A
TRP
408
1
15
4
TRANSFERASE
TRANSFERASE, CREATINE BIOSYNTHESIS, CATALYTIC TRIAD, REACTION MECHANISM, NOVEL FOLD, FIVEFOLD PSEUDOSYMMETRY
A
ALA
286
A
ALA
286
1
A
PRO
287
A
PRO
287
0.98
GATM_HUMAN
UNP
1
1
P50440
MLRVRCLRGGSRGAEAVHYIGSRLGRTLTGWVQRTFQSTQAATASSRNSCAADDKATEPLPKDCPVSSYNEWDPLEEVIV
GRAENACVPPFTIEVKANTYEKYWPFYQKQGGHYFPKDHLKKAVAEIEEMCNILKTEGVTVRRPDPIDWSLKYKTPDFES
TGLYSAMPRDILIVVGNEIIEAPMAWRSRFFEYRAYRSIIKDYFHRGAKWTTAPKPTMADELYNQDYPIHSVEDRHKLAA
QGKFVTTEFEPCFDAADFIRAGRDIFAQRSQVTNYLGIEWMRRHLAPDYRVHIISFKDPNPMHIDATFNIIGPGIVLSNP
DRPCHQIDLFKKAGWTIITPPTPIIPDDHPLWMSSKWLSMNVLMLDEKRVMVDANEVPIQKMFEKLGITTIKVNIRNANS
LGGGFHCWTCDVRRRGTLQSYLD
1
423
4JDW
1
423
P50440
A
1
1
423
1
CYS
engineered mutation
ALA
407
4JDW
A
P50440
UNP
407
407
3
2
3
3
3
3
2
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
THR
140
A
THR
140
A
ARG
143
A
ARG
143
A
GLU
77
A
GLU
77
A
VAL
80
A
VAL
80
A
THR
409
A
THR
409
A
ASP
411
A
ASP
411
A
LYS
152
A
LYS
152
A
LYS
154
A
LYS
154
A
GLU
159
A
GLU
159
A
THR
161
A
THR
161
A
LEU
172
A
LEU
172
A
VAL
175
A
VAL
175
A
GLU
178
A
GLU
178
A
GLU
181
A
GLU
181
A
LYS
209
A
LYS
209
A
THR
212
A
THR
212
A
PHE
258
A
PHE
258
A
ALA
261
A
ALA
261
A
ASP
264
A
ASP
264
A
ALA
267
A
ALA
267
A
ARG
290
A
ARG
290
A
ILE
293
A
ILE
293
A
THR
336
A
THR
336
A
ILE
338
A
ILE
338
A
ILE
315
A
ILE
315
A
SER
318
A
SER
318
A
PHE
308
A
PHE
308
A
GLY
312
A
GLY
312
A
THR
389
A
THR
389
A
VAL
393
A
VAL
393
A
ARG
369
A
ARG
369
A
ASP
373
A
ASP
373
A
LEU
363
A
LEU
363
A
ASP
366
A
ASP
366
A
PRO
74
A
PRO
74
A
GLU
77
A
GLU
77
A
ARG
413
A
ARG
413
A
ARG
415
A
ARG
415
BINDING SITE FOR RESIDUE ARG A 500
A
ARG
500
Software
16
A
ASP
170
A
ASP
170
16
1_555
A
ALA
256
A
ALA
256
16
1_555
A
MET
302
A
MET
302
16
1_555
A
HIS
303
A
HIS
303
16
1_555
A
ASP
305
A
ASP
305
16
1_555
A
ALA
306
A
ALA
306
16
1_555
A
ARG
322
A
ARG
322
16
1_555
A
SER
354
A
SER
354
16
1_555
A
SER
355
A
SER
355
16
1_555
A
GLY
402
A
GLY
402
16
1_555
A
ALA
407
A
ALA
407
16
1_555
A
HOH
601
C
HOH
16
1_555
A
HOH
634
C
HOH
16
1_555
A
HOH
658
C
HOH
16
1_555
A
HOH
668
C
HOH
16
1_555
A
HOH
688
C
HOH
16
1_555
96
P 43 21 2