0.032700
0.000000
0.000000
0.000000
0.014472
0.000000
0.000000
0.000000
0.011843
0.000000
0.000000
0.000000
Sha, F.
Koide, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
30.581
69.098
84.441
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
110
14924
14929
10.1073/pnas.1303640110
23980151
Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains.
2013
10.2210/pdb4je4/pdb
pdb_00004je4
100
1
CCD
2012-06-20
ADSC QUANTUM 315
Si(220)
SINGLE WAVELENGTH
M
x-ray
1
0.979180
1.0
24-ID-E
APS
0.979180
SYNCHROTRON
APS BEAMLINE 24-ID-E
12104.635
Tyrosine-protein phosphatase non-receptor type 11
N-terminal SH2 domain
1
man
polymer
10129.182
Monobody NSa1
1
man
polymer
18.015
water
85
nat
water
Protein-tyrosine phosphatase 1D, PTP-1D, Protein-tyrosine phosphatase 2C, PTP-2C, SH-PTP2, SHP-2, Shp2, SH-PTP3
no
no
MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQY
YMEHHGQLKEKNGDVIELKYPLNKEK
MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQY
YMEHHGQLKEKNGDVIELKYPLNKEK
A
polypeptide(L)
no
no
VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYVITYGETGSGGYAWQEFEVPGSKSTATISGLKPGVDYTITVYAGYYGY
PTYYSSPISINYRT
VSSVPTKLEVVAATPTSLLISWDAPAVTVDYYVITYGETGSGGYAWQEFEVPGSKSTATISGLKPGVDYTITVYAGYYGY
PTYYSSPISINYRT
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
PTP2C, PTPN11, SHPTP2
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pHBT
human
sample
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pHFT2
1
2.01
38.69
VAPOR DIFFUSION, HANGING DROP
8.0
30% PEG 4000, 0.1M Tris-HCl, 0.2M Magnesium Chloride, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Database references
Database references
Structure summary
Data collection
Database references
1
0
2013-08-28
1
1
2013-09-11
1
2
2013-09-25
1
3
2014-03-12
1
4
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2013-02-26
REL
REL
HOH
water
HOH
3
3
HOH
HOH
201
A
HOH
4
3
HOH
HOH
202
A
HOH
5
3
HOH
HOH
203
A
HOH
7
3
HOH
HOH
204
A
HOH
8
3
HOH
HOH
205
A
HOH
10
3
HOH
HOH
206
A
HOH
11
3
HOH
HOH
207
A
HOH
13
3
HOH
HOH
208
A
HOH
14
3
HOH
HOH
209
A
HOH
15
3
HOH
HOH
210
A
HOH
16
3
HOH
HOH
211
A
HOH
19
3
HOH
HOH
212
A
HOH
22
3
HOH
HOH
213
A
HOH
23
3
HOH
HOH
214
A
HOH
25
3
HOH
HOH
215
A
HOH
28
3
HOH
HOH
216
A
HOH
30
3
HOH
HOH
217
A
HOH
33
3
HOH
HOH
218
A
HOH
36
3
HOH
HOH
219
A
HOH
37
3
HOH
HOH
220
A
HOH
38
3
HOH
HOH
221
A
HOH
39
3
HOH
HOH
222
A
HOH
40
3
HOH
HOH
223
A
HOH
41
3
HOH
HOH
224
A
HOH
42
3
HOH
HOH
225
A
HOH
44
3
HOH
HOH
226
A
HOH
45
3
HOH
HOH
227
A
HOH
46
3
HOH
HOH
228
A
HOH
50
3
HOH
HOH
229
A
HOH
53
3
HOH
HOH
230
A
HOH
55
3
HOH
HOH
231
A
HOH
57
3
HOH
HOH
232
A
HOH
58
3
HOH
HOH
233
A
HOH
59
3
HOH
HOH
234
A
HOH
60
3
HOH
HOH
235
A
HOH
61
3
HOH
HOH
236
A
HOH
63
3
HOH
HOH
237
A
HOH
65
3
HOH
HOH
238
A
HOH
66
3
HOH
HOH
239
A
HOH
67
3
HOH
HOH
240
A
HOH
69
3
HOH
HOH
241
A
HOH
71
3
HOH
HOH
242
A
HOH
73
3
HOH
HOH
243
A
HOH
74
3
HOH
HOH
244
A
HOH
75
3
HOH
HOH
245
A
HOH
76
3
HOH
HOH
246
A
HOH
79
3
HOH
HOH
247
A
HOH
80
3
HOH
HOH
248
A
HOH
81
3
HOH
HOH
249
A
HOH
82
3
HOH
HOH
250
A
HOH
83
3
HOH
HOH
251
A
HOH
85
3
HOH
HOH
252
A
HOH
1
3
HOH
HOH
101
B
HOH
2
3
HOH
HOH
102
B
HOH
6
3
HOH
HOH
103
B
HOH
9
3
HOH
HOH
104
B
HOH
12
3
HOH
HOH
105
B
HOH
17
3
HOH
HOH
106
B
HOH
18
3
HOH
HOH
107
B
HOH
20
3
HOH
HOH
108
B
HOH
21
3
HOH
HOH
109
B
HOH
24
3
HOH
HOH
110
B
HOH
26
3
HOH
HOH
111
B
HOH
27
3
HOH
HOH
112
B
HOH
29
3
HOH
HOH
113
B
HOH
31
3
HOH
HOH
114
B
HOH
32
3
HOH
HOH
115
B
HOH
34
3
HOH
HOH
116
B
HOH
35
3
HOH
HOH
117
B
HOH
43
3
HOH
HOH
118
B
HOH
47
3
HOH
HOH
119
B
HOH
48
3
HOH
HOH
120
B
HOH
49
3
HOH
HOH
121
B
HOH
51
3
HOH
HOH
122
B
HOH
52
3
HOH
HOH
123
B
HOH
54
3
HOH
HOH
124
B
HOH
56
3
HOH
HOH
125
B
HOH
62
3
HOH
HOH
126
B
HOH
64
3
HOH
HOH
127
B
HOH
68
3
HOH
HOH
128
B
HOH
70
3
HOH
HOH
129
B
HOH
72
3
HOH
HOH
130
B
HOH
77
3
HOH
HOH
131
B
HOH
78
3
HOH
HOH
132
B
HOH
84
3
HOH
HOH
133
B
n
1
1
A
n
2
2
A
SER
3
n
3
SER
3
A
ARG
4
n
4
ARG
4
A
ARG
5
n
5
ARG
5
A
TRP
6
n
6
TRP
6
A
PHE
7
n
7
PHE
7
A
HIS
8
n
8
HIS
8
A
PRO
9
n
9
PRO
9
A
ASN
10
n
10
ASN
10
A
ILE
11
n
11
ILE
11
A
THR
12
n
12
THR
12
A
GLY
13
n
13
GLY
13
A
VAL
14
n
14
VAL
14
A
GLU
15
n
15
GLU
15
A
ALA
16
n
16
ALA
16
A
GLU
17
n
17
GLU
17
A
ASN
18
n
18
ASN
18
A
LEU
19
n
19
LEU
19
A
LEU
20
n
20
LEU
20
A
LEU
21
n
21
LEU
21
A
THR
22
n
22
THR
22
A
ARG
23
n
23
ARG
23
A
GLY
24
n
24
GLY
24
A
VAL
25
n
25
VAL
25
A
ASP
26
n
26
ASP
26
A
GLY
27
n
27
GLY
27
A
SER
28
n
28
SER
28
A
PHE
29
n
29
PHE
29
A
LEU
30
n
30
LEU
30
A
ALA
31
n
31
ALA
31
A
ARG
32
n
32
ARG
32
A
PRO
33
n
33
PRO
33
A
SER
34
n
34
SER
34
A
LYS
35
n
35
LYS
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PRO
38
n
38
PRO
38
A
GLY
39
n
39
GLY
39
A
ASP
40
n
40
ASP
40
A
PHE
41
n
41
PHE
41
A
THR
42
n
42
THR
42
A
LEU
43
n
43
LEU
43
A
SER
44
n
44
SER
44
A
VAL
45
n
45
VAL
45
A
ARG
46
n
46
ARG
46
A
ARG
47
n
47
ARG
47
A
ASN
48
n
48
ASN
48
A
GLY
49
n
49
GLY
49
A
ALA
50
n
50
ALA
50
A
VAL
51
n
51
VAL
51
A
THR
52
n
52
THR
52
A
HIS
53
n
53
HIS
53
A
ILE
54
n
54
ILE
54
A
LYS
55
n
55
LYS
55
A
ILE
56
n
56
ILE
56
A
GLN
57
n
57
GLN
57
A
ASN
58
n
58
ASN
58
A
THR
59
n
59
THR
59
A
GLY
60
n
60
GLY
60
A
ASP
61
n
61
ASP
61
A
TYR
62
n
62
TYR
62
A
TYR
63
n
63
TYR
63
A
ASP
64
n
64
ASP
64
A
LEU
65
n
65
LEU
65
A
TYR
66
n
66
TYR
66
A
GLY
67
n
67
GLY
67
A
GLY
68
n
68
GLY
68
A
GLU
69
n
69
GLU
69
A
LYS
70
n
70
LYS
70
A
PHE
71
n
71
PHE
71
A
ALA
72
n
72
ALA
72
A
THR
73
n
73
THR
73
A
LEU
74
n
74
LEU
74
A
ALA
75
n
75
ALA
75
A
GLU
76
n
76
GLU
76
A
LEU
77
n
77
LEU
77
A
VAL
78
n
78
VAL
78
A
GLN
79
n
79
GLN
79
A
TYR
80
n
80
TYR
80
A
TYR
81
n
81
TYR
81
A
MET
82
n
82
MET
82
A
GLU
83
n
83
GLU
83
A
HIS
84
n
84
HIS
84
A
HIS
85
n
85
HIS
85
A
GLY
86
n
86
GLY
86
A
GLN
87
n
87
GLN
87
A
LEU
88
n
88
LEU
88
A
LYS
89
n
89
LYS
89
A
GLU
90
n
90
GLU
90
A
LYS
91
n
91
LYS
91
A
ASN
92
n
92
ASN
92
A
GLY
93
n
93
GLY
93
A
ASP
94
n
94
ASP
94
A
VAL
95
n
95
VAL
95
A
ILE
96
n
96
ILE
96
A
GLU
97
n
97
GLU
97
A
LEU
98
n
98
LEU
98
A
LYS
99
n
99
LYS
99
A
TYR
100
n
100
TYR
100
A
PRO
101
n
101
PRO
101
A
LEU
102
n
102
LEU
102
A
ASN
103
n
103
ASN
103
A
LYS
104
n
104
LYS
104
A
n
105
105
A
n
106
106
A
n
1
1
B
SER
2
n
2
SER
2
B
SER
3
n
3
SER
3
B
VAL
4
n
4
VAL
4
B
PRO
5
n
5
PRO
5
B
THR
6
n
6
THR
6
B
LYS
7
n
7
LYS
7
B
LEU
8
n
8
LEU
8
B
GLU
9
n
9
GLU
9
B
VAL
10
n
10
VAL
10
B
VAL
11
n
11
VAL
11
B
ALA
12
n
12
ALA
12
B
ALA
13
n
13
ALA
13
B
THR
14
n
14
THR
14
B
PRO
15
n
15
PRO
15
B
THR
16
n
16
THR
16
B
SER
17
n
17
SER
17
B
LEU
18
n
18
LEU
18
B
LEU
19
n
19
LEU
19
B
ILE
20
n
20
ILE
20
B
SER
21
n
21
SER
21
B
TRP
22
n
22
TRP
22
B
ASP
23
n
23
ASP
23
B
ALA
24
n
24
ALA
24
B
PRO
25
n
25
PRO
25
B
ALA
26
n
26
ALA
26
B
VAL
27
n
27
VAL
27
B
THR
28
n
28
THR
28
B
VAL
29
n
29
VAL
29
B
ASP
30
n
30
ASP
30
B
TYR
31
n
31
TYR
31
B
TYR
32
n
32
TYR
32
B
VAL
33
n
33
VAL
33
B
ILE
34
n
34
ILE
34
B
THR
35
n
35
THR
35
B
TYR
36
n
36
TYR
36
B
GLY
37
n
37
GLY
37
B
GLU
38
n
38
GLU
38
B
THR
39
n
39
THR
39
B
GLY
40
n
40
GLY
40
B
SER
41
n
41
SER
41
B
GLY
42
n
42
GLY
42
B
GLY
43
n
43
GLY
43
B
TYR
44
n
44
TYR
44
B
ALA
45
n
45
ALA
45
B
TRP
46
n
46
TRP
46
B
GLN
47
n
47
GLN
47
B
GLU
48
n
48
GLU
48
B
PHE
49
n
49
PHE
49
B
GLU
50
n
50
GLU
50
B
VAL
51
n
51
VAL
51
B
PRO
52
n
52
PRO
52
B
GLY
53
n
53
GLY
53
B
SER
54
n
54
SER
54
B
LYS
55
n
55
LYS
55
B
SER
56
n
56
SER
56
B
THR
57
n
57
THR
57
B
ALA
58
n
58
ALA
58
B
THR
59
n
59
THR
59
B
ILE
60
n
60
ILE
60
B
SER
61
n
61
SER
61
B
GLY
62
n
62
GLY
62
B
LEU
63
n
63
LEU
63
B
LYS
64
n
64
LYS
64
B
PRO
65
n
65
PRO
65
B
GLY
66
n
66
GLY
66
B
VAL
67
n
67
VAL
67
B
ASP
68
n
68
ASP
68
B
TYR
69
n
69
TYR
69
B
THR
70
n
70
THR
70
B
ILE
71
n
71
ILE
71
B
THR
72
n
72
THR
72
B
VAL
73
n
73
VAL
73
B
TYR
74
n
74
TYR
74
B
ALA
75
n
75
ALA
75
B
GLY
76
n
76
GLY
76
B
TYR
77
n
77
TYR
77
B
TYR
78
n
78
TYR
78
B
GLY
79
n
79
GLY
79
B
TYR
80
n
80
TYR
80
B
PRO
81
n
81
PRO
81
B
THR
82
n
82
THR
82
B
TYR
83
n
83
TYR
83
B
TYR
84
n
84
TYR
84
B
SER
85
n
85
SER
85
B
SER
86
n
86
SER
86
B
PRO
87
n
87
PRO
87
B
ILE
88
n
88
ILE
88
B
SER
89
n
89
SER
89
B
ILE
90
n
90
ILE
90
B
ASN
91
n
91
ASN
91
B
TYR
92
n
92
TYR
92
B
ARG
93
n
93
ARG
93
B
THR
94
n
94
THR
94
B
author_and_software_defined_assembly
PISA
2
dimeric
1780
-8
9510
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASP
64
A
O
ASP
64
A
N
GLN
57
A
N
GLN
57
A
O
ALA
50
A
O
ALA
50
A
N
ARG
47
A
N
ARG
47
A
O
THR
42
A
O
THR
42
A
N
ARG
32
A
N
ARG
32
A
N
PHE
29
A
N
PHE
29
A
O
TYR
100
A
O
TYR
100
A
O
ASP
64
A
O
ASP
64
A
N
GLN
57
A
N
GLN
57
A
N
HIS
53
A
N
HIS
53
B
O
TYR
84
B
O
TYR
84
B
O
TYR
83
B
O
TYR
83
B
N
TYR
77
B
N
TYR
77
B
O
THR
72
B
O
THR
72
B
N
THR
35
B
N
THR
35
B
N
TYR
32
B
N
TYR
32
B
O
VAL
51
B
O
VAL
51
B
N
GLU
9
B
N
GLU
9
B
O
SER
21
B
O
SER
21
B
N
LEU
18
B
N
LEU
18
B
O
ILE
60
B
O
ILE
60
1
A
MET
1
A
MET
1
1
Y
1
A
THR
2
A
THR
2
1
Y
1
A
GLU
105
A
GLU
105
1
Y
1
A
LYS
106
A
LYS
106
1
Y
1
B
VAL
1
B
VAL
1
1
Y
1
A
ARG
4
72.16
-77.41
1
B
SER
85
-163.74
-149.40
54.320
19.2185
7.330
-0.0058
-0.0000
-0.0000
-0.9718
0.0000
0.9776
0.2545
0.2040
0.2063
2.31
34.55
314
8427
6926
4.5300
82.8100
1.000
1.000
0.8243
0.1800
random
1
1.380
MOLECULAR REPLACEMENT
23.5800
0.6000
0.9000
ML
FLAT BULK SOLVENT MODEL
31.7930
0.3930
2.31
34.55
85
1616
0
0
1531
0.003
1573
0.768
2145
0.051
234
0.004
272
12.294
558
0.2815
0.2178
2.9054
116
2785
2901
2
71.0000
0.2459
0.1986
34.5529
198
3827
4025
2
94.0000
2.31
34.55
4JE4
8458
8427
0.0
3.0
0.075
1
3.8
99.6
0.277
2.31
2.42
5.0
1181
1
3.6
98.7
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7.3_928
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
ADSC
Quantum
phasing
PHASER
Crystal Structure of Monobody NSa1/SHP2 N-SH2 Domain Complex
1
N
N
2
N
N
3
N
N
3
N
N
A
THR
12
A
THR
12
HELX_P
A
GLY
24
A
GLY
24
1
1
13
A
THR
73
A
THR
73
HELX_P
A
HIS
84
A
HIS
84
1
2
12
Signaling protein/protein binding
engineered binding protein, SHP2 SH2-monobody complex, Phosphatase, Phosphotyrosine Binding, Phosphorylation, Signaling protein-protein binding complex
A
PRO
38
A
PRO
38
1
A
GLY
39
A
GLY
39
-5.86
B
TYR
80
B
TYR
80
1
B
PRO
81
B
PRO
81
1.61
PTN11_HUMAN
UNP
1
1
Q06124
MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQY
YMEHHGQLKEKNGDVIELKYPLN
4JE4
PDB
2
4JE4
1
103
4JE4
1
103
Q06124
A
1
1
103
1
94
4JE4
1
94
4JE4
B
2
1
94
1
expression tag
LYS
104
4JE4
A
Q06124
UNP
104
1
expression tag
GLU
105
4JE4
A
Q06124
UNP
105
1
expression tag
LYS
106
4JE4
A
Q06124
UNP
106
5
6
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
63
A
TYR
63
A
ASP
64
A
ASP
64
A
ALA
50
A
ALA
50
A
ASN
58
A
ASN
58
A
PHE
41
A
PHE
41
A
ARG
47
A
ARG
47
A
SER
28
A
SER
28
A
PRO
33
A
PRO
33
A
TYR
100
A
TYR
100
A
PRO
101
A
PRO
101
A
TYR
63
A
TYR
63
A
ASP
64
A
ASP
64
A
ALA
50
A
ALA
50
A
ASN
58
A
ASN
58
B
TYR
83
B
TYR
83
B
ARG
93
B
ARG
93
B
ASP
68
B
ASP
68
B
TYR
77
B
TYR
77
B
TYR
31
B
TYR
31
B
GLU
38
B
GLU
38
B
GLN
47
B
GLN
47
B
PRO
52
B
PRO
52
B
THR
6
B
THR
6
B
ALA
13
B
ALA
13
B
LEU
18
B
LEU
18
B
ASP
23
B
ASP
23
B
THR
57
B
THR
57
B
ILE
60
B
ILE
60
19
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