0.014217 0.000000 0.000000 0.000000 0.014217 0.000000 0.000000 0.000000 0.013362 0.000000 0.000000 0.000000 Kumar, R. Lovell, S. Battaile, K.P. Rivera, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 70.340 70.340 74.840 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N NA N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C Y 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N N N 278 S C N 279 N C N 280 N O N 281 N C N 282 N O N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 R C N 296 N O N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N N Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing US Biochemistry BICHAW 0033 0006-2960 52 2705 2707 10.1021/bi400280z 23578210 The Hemophore HasA from Yersinia pestis (HasAyp) Coordinates Hemin with a Single Residue, Tyr75, and with Minimal Conformational Change. 2013 10.2210/pdb4jer/pdb pdb_00004jer 100 1 PIXEL 2012-02-25 DECTRIS PILATUS 6M SINGLE WAVELENGTH x-ray 1 1.0000 1.0 17-ID APS 1.0000 SYNCHROTRON APS BEAMLINE 17-ID 21025.088 Hemophore HasA UNP residues 1-193 1 man polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 220 nat water Secreted hemophore no no MSTTIQYNSNYADYSISSYLREWANNFGDIDQAPAETKDRGSFSGSSTLFSGTQYAIGSSHSNPEGMIAEGDLKYSFMPQ HTFHGQIDTLQFGKDLATNAGGPSAGKHLEKIDITFNELDLSGEFDSGKSMTENHQGDMHKSVRGLMKGNPDPMLEVMKA KGINVDTAFKDLSIASQYPDSGYMSDAPMVDTV MSTTIQYNSNYADYSISSYLREWANNFGDIDQAPAETKDRGSFSGSSTLFSGTQYAIGSSHSNPEGMIAEGDLKYSFMPQ HTFHGQIDTLQFGKDLATNAGGPSAGKHLEKIDITFNELDLSGEFDSGKSMTENHQGDMHKSVRGLMKGNPDPMLEVMKA KGINVDTAFKDLSIASQYPDSGYMSDAPMVDTV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample hasA, y0314, YP_3127, YPO3922 632 Yersinia pestis 469008 Escherichia coli BL21-GOLD (DE3) plasmid pET11a 1 2.20 44.13 VAPOR DIFFUSION 7.8 0.2 M potassium sodium tartarate tetrahydrate, 20% (w/v) PEG 3350, pH 7.8, vapor diffusion, temperature 293K 293 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_site repository Initial release Database references Refinement description Data collection Database references Derived calculations Refinement description 1 0 2013-04-24 1 1 2013-05-29 1 2 2017-11-15 1 3 2023-09-20 _software.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-02-27 REL REL NA SODIUM ION HOH water 1DK0 PDB entry 1DK0 PDB experimental model NA 1 2 NA NA 201 A HOH 1 3 HOH HOH 301 A HOH 2 3 HOH HOH 302 A HOH 3 3 HOH HOH 303 A HOH 4 3 HOH HOH 304 A HOH 5 3 HOH HOH 305 A HOH 6 3 HOH HOH 306 A HOH 7 3 HOH HOH 307 A HOH 8 3 HOH HOH 308 A HOH 9 3 HOH HOH 309 A HOH 10 3 HOH HOH 310 A HOH 11 3 HOH HOH 311 A HOH 12 3 HOH HOH 312 A HOH 13 3 HOH HOH 313 A HOH 14 3 HOH HOH 314 A HOH 15 3 HOH HOH 315 A HOH 16 3 HOH HOH 316 A HOH 17 3 HOH HOH 317 A HOH 18 3 HOH HOH 318 A HOH 19 3 HOH HOH 319 A HOH 20 3 HOH HOH 320 A HOH 21 3 HOH HOH 321 A HOH 22 3 HOH HOH 322 A HOH 23 3 HOH HOH 323 A HOH 24 3 HOH HOH 324 A HOH 25 3 HOH HOH 325 A HOH 26 3 HOH HOH 326 A HOH 27 3 HOH HOH 327 A HOH 28 3 HOH HOH 328 A HOH 29 3 HOH HOH 329 A HOH 30 3 HOH HOH 330 A HOH 31 3 HOH HOH 331 A HOH 32 3 HOH HOH 332 A HOH 33 3 HOH HOH 333 A HOH 34 3 HOH HOH 334 A HOH 35 3 HOH HOH 335 A HOH 36 3 HOH HOH 336 A HOH 37 3 HOH HOH 337 A HOH 38 3 HOH HOH 338 A HOH 39 3 HOH HOH 339 A HOH 40 3 HOH HOH 340 A HOH 41 3 HOH HOH 341 A HOH 42 3 HOH HOH 342 A HOH 43 3 HOH HOH 343 A HOH 44 3 HOH HOH 344 A HOH 45 3 HOH HOH 345 A HOH 46 3 HOH HOH 346 A HOH 47 3 HOH HOH 347 A HOH 48 3 HOH HOH 348 A HOH 49 3 HOH HOH 349 A HOH 50 3 HOH HOH 350 A HOH 51 3 HOH HOH 351 A HOH 52 3 HOH HOH 352 A HOH 53 3 HOH HOH 353 A HOH 54 3 HOH HOH 354 A HOH 55 3 HOH HOH 355 A HOH 56 3 HOH HOH 356 A HOH 57 3 HOH HOH 357 A HOH 58 3 HOH HOH 358 A HOH 59 3 HOH HOH 359 A HOH 60 3 HOH HOH 360 A HOH 61 3 HOH HOH 361 A HOH 62 3 HOH HOH 362 A HOH 63 3 HOH HOH 363 A HOH 64 3 HOH HOH 364 A HOH 65 3 HOH HOH 365 A HOH 66 3 HOH HOH 366 A HOH 67 3 HOH HOH 367 A HOH 68 3 HOH HOH 368 A HOH 69 3 HOH HOH 369 A HOH 70 3 HOH HOH 370 A HOH 71 3 HOH HOH 371 A HOH 72 3 HOH HOH 372 A HOH 73 3 HOH HOH 373 A HOH 74 3 HOH HOH 374 A HOH 75 3 HOH HOH 375 A HOH 76 3 HOH HOH 376 A HOH 77 3 HOH HOH 377 A HOH 78 3 HOH HOH 378 A HOH 79 3 HOH HOH 379 A HOH 80 3 HOH HOH 380 A HOH 81 3 HOH HOH 381 A HOH 82 3 HOH HOH 382 A HOH 83 3 HOH HOH 383 A HOH 84 3 HOH HOH 384 A HOH 85 3 HOH HOH 385 A HOH 86 3 HOH HOH 386 A HOH 87 3 HOH HOH 387 A HOH 88 3 HOH HOH 388 A HOH 89 3 HOH HOH 389 A HOH 90 3 HOH HOH 390 A HOH 91 3 HOH HOH 391 A HOH 92 3 HOH HOH 392 A HOH 93 3 HOH HOH 393 A HOH 94 3 HOH HOH 394 A HOH 95 3 HOH HOH 395 A HOH 96 3 HOH HOH 396 A HOH 97 3 HOH HOH 397 A HOH 98 3 HOH HOH 398 A HOH 99 3 HOH HOH 399 A HOH 100 3 HOH HOH 400 A HOH 101 3 HOH HOH 401 A HOH 102 3 HOH HOH 402 A HOH 103 3 HOH HOH 403 A HOH 104 3 HOH HOH 404 A HOH 105 3 HOH HOH 405 A HOH 106 3 HOH HOH 406 A HOH 107 3 HOH HOH 407 A HOH 108 3 HOH HOH 408 A HOH 109 3 HOH HOH 409 A HOH 110 3 HOH HOH 410 A HOH 111 3 HOH HOH 411 A HOH 112 3 HOH HOH 412 A HOH 113 3 HOH HOH 413 A HOH 114 3 HOH HOH 414 A HOH 115 3 HOH HOH 415 A HOH 116 3 HOH HOH 416 A HOH 117 3 HOH HOH 417 A HOH 118 3 HOH HOH 418 A HOH 119 3 HOH HOH 419 A HOH 120 3 HOH HOH 420 A HOH 121 3 HOH HOH 421 A HOH 122 3 HOH HOH 422 A HOH 123 3 HOH HOH 423 A HOH 124 3 HOH HOH 424 A HOH 125 3 HOH HOH 425 A HOH 126 3 HOH HOH 426 A HOH 127 3 HOH HOH 427 A HOH 128 3 HOH HOH 428 A HOH 129 3 HOH HOH 429 A HOH 130 3 HOH HOH 430 A HOH 131 3 HOH HOH 431 A HOH 132 3 HOH HOH 432 A HOH 133 3 HOH HOH 433 A HOH 134 3 HOH HOH 434 A HOH 135 3 HOH HOH 435 A HOH 136 3 HOH HOH 436 A HOH 137 3 HOH HOH 437 A HOH 138 3 HOH HOH 438 A HOH 139 3 HOH HOH 439 A HOH 140 3 HOH HOH 440 A HOH 141 3 HOH HOH 441 A HOH 142 3 HOH HOH 442 A HOH 143 3 HOH HOH 443 A HOH 144 3 HOH HOH 444 A HOH 145 3 HOH HOH 445 A HOH 146 3 HOH HOH 446 A HOH 147 3 HOH HOH 447 A HOH 148 3 HOH HOH 448 A HOH 149 3 HOH HOH 449 A HOH 150 3 HOH HOH 450 A HOH 151 3 HOH HOH 451 A HOH 152 3 HOH HOH 452 A HOH 153 3 HOH HOH 453 A HOH 154 3 HOH HOH 454 A HOH 155 3 HOH HOH 455 A HOH 156 3 HOH HOH 456 A HOH 157 3 HOH HOH 457 A HOH 158 3 HOH HOH 458 A HOH 159 3 HOH HOH 459 A HOH 160 3 HOH HOH 460 A HOH 161 3 HOH HOH 461 A HOH 162 3 HOH HOH 462 A HOH 163 3 HOH HOH 463 A HOH 164 3 HOH HOH 464 A HOH 165 3 HOH HOH 465 A HOH 166 3 HOH HOH 466 A HOH 167 3 HOH HOH 467 A HOH 168 3 HOH HOH 468 A HOH 169 3 HOH HOH 469 A HOH 170 3 HOH HOH 470 A HOH 171 3 HOH HOH 471 A HOH 172 3 HOH HOH 472 A HOH 173 3 HOH HOH 473 A HOH 174 3 HOH HOH 474 A HOH 175 3 HOH HOH 475 A HOH 176 3 HOH HOH 476 A HOH 177 3 HOH HOH 477 A HOH 178 3 HOH HOH 478 A HOH 179 3 HOH HOH 479 A HOH 180 3 HOH HOH 480 A HOH 181 3 HOH HOH 481 A HOH 182 3 HOH HOH 482 A HOH 183 3 HOH HOH 483 A HOH 184 3 HOH HOH 484 A HOH 185 3 HOH HOH 485 A HOH 186 3 HOH HOH 486 A HOH 187 3 HOH HOH 487 A HOH 188 3 HOH HOH 488 A HOH 189 3 HOH HOH 489 A HOH 190 3 HOH HOH 490 A HOH 191 3 HOH HOH 491 A HOH 192 3 HOH HOH 492 A HOH 193 3 HOH HOH 493 A HOH 194 3 HOH HOH 494 A HOH 195 3 HOH HOH 495 A HOH 196 3 HOH HOH 496 A HOH 197 3 HOH HOH 497 A HOH 198 3 HOH HOH 498 A HOH 199 3 HOH HOH 499 A HOH 200 3 HOH HOH 500 A HOH 201 3 HOH HOH 501 A HOH 202 3 HOH HOH 502 A HOH 203 3 HOH HOH 503 A HOH 204 3 HOH HOH 504 A HOH 205 3 HOH HOH 505 A HOH 206 3 HOH HOH 506 A HOH 207 3 HOH HOH 507 A HOH 208 3 HOH HOH 508 A HOH 209 3 HOH HOH 509 A HOH 210 3 HOH HOH 510 A HOH 211 3 HOH HOH 511 A HOH 212 3 HOH HOH 512 A HOH 213 3 HOH HOH 513 A HOH 214 3 HOH HOH 514 A HOH 215 3 HOH HOH 515 A HOH 216 3 HOH HOH 516 A HOH 217 3 HOH HOH 517 A HOH 218 3 HOH HOH 518 A HOH 219 3 HOH HOH 519 A HOH 220 3 HOH HOH 520 A n 1 1 A SER 2 n 2 SER 2 A THR 3 n 3 THR 3 A THR 4 n 4 THR 4 A ILE 5 n 5 ILE 5 A GLN 6 n 6 GLN 6 A TYR 7 n 7 TYR 7 A ASN 8 n 8 ASN 8 A SER 9 n 9 SER 9 A ASN 10 n 10 ASN 10 A TYR 11 n 11 TYR 11 A ALA 12 n 12 ALA 12 A ASP 13 n 13 ASP 13 A TYR 14 n 14 TYR 14 A SER 15 n 15 SER 15 A ILE 16 n 16 ILE 16 A SER 17 n 17 SER 17 A SER 18 n 18 SER 18 A TYR 19 n 19 TYR 19 A LEU 20 n 20 LEU 20 A ARG 21 n 21 ARG 21 A GLU 22 n 22 GLU 22 A TRP 23 n 23 TRP 23 A ALA 24 n 24 ALA 24 A ASN 25 n 25 ASN 25 A ASN 26 n 26 ASN 26 A PHE 27 n 27 PHE 27 A GLY 28 n 28 GLY 28 A ASP 29 n 29 ASP 29 A ILE 30 n 30 ILE 30 A ASP 31 n 31 ASP 31 A GLN 32 n 32 GLN 32 A ALA 33 n 33 ALA 33 A PRO 34 n 34 PRO 34 A ALA 35 n 35 ALA 35 A GLU 36 n 36 GLU 36 A THR 37 n 37 THR 37 A LYS 38 n 38 LYS 38 A ASP 39 n 39 ASP 39 A ARG 40 n 40 ARG 40 A GLY 41 n 41 GLY 41 A SER 42 n 42 SER 42 A PHE 43 n 43 PHE 43 A SER 44 n 44 SER 44 A GLY 45 n 45 GLY 45 A SER 46 n 46 SER 46 A SER 47 n 47 SER 47 A n 48 48 A n 49 49 A PHE 50 n 50 PHE 50 A SER 51 n 51 SER 51 A GLY 52 n 52 GLY 52 A THR 53 n 53 THR 53 A GLN 54 n 54 GLN 54 A TYR 55 n 55 TYR 55 A ALA 56 n 56 ALA 56 A ILE 57 n 57 ILE 57 A GLY 58 n 58 GLY 58 A SER 59 n 59 SER 59 A SER 60 n 60 SER 60 A HIS 61 n 61 HIS 61 A SER 62 n 62 SER 62 A ASN 63 n 63 ASN 63 A PRO 64 n 64 PRO 64 A GLU 65 n 65 GLU 65 A GLY 66 n 66 GLY 66 A MET 67 n 67 MET 67 A ILE 68 n 68 ILE 68 A ALA 69 n 69 ALA 69 A GLU 70 n 70 GLU 70 A GLY 71 n 71 GLY 71 A ASP 72 n 72 ASP 72 A LEU 73 n 73 LEU 73 A LYS 74 n 74 LYS 74 A TYR 75 n 75 TYR 75 A SER 76 n 76 SER 76 A PHE 77 n 77 PHE 77 A MET 78 n 78 MET 78 A PRO 79 n 79 PRO 79 A GLN 80 n 80 GLN 80 A HIS 81 n 81 HIS 81 A THR 82 n 82 THR 82 A PHE 83 n 83 PHE 83 A HIS 84 n 84 HIS 84 A GLY 85 n 85 GLY 85 A GLN 86 n 86 GLN 86 A ILE 87 n 87 ILE 87 A ASP 88 n 88 ASP 88 A THR 89 n 89 THR 89 A LEU 90 n 90 LEU 90 A GLN 91 n 91 GLN 91 A PHE 92 n 92 PHE 92 A GLY 93 n 93 GLY 93 A LYS 94 n 94 LYS 94 A ASP 95 n 95 ASP 95 A LEU 96 n 96 LEU 96 A ALA 97 n 97 ALA 97 A THR 98 n 98 THR 98 A ASN 99 n 99 ASN 99 A ALA 100 n 100 ALA 100 A GLY 101 n 101 GLY 101 A GLY 102 n 102 GLY 102 A PRO 103 n 103 PRO 103 A SER 104 n 104 SER 104 A ALA 105 n 105 ALA 105 A GLY 106 n 106 GLY 106 A LYS 107 n 107 LYS 107 A HIS 108 n 108 HIS 108 A LEU 109 n 109 LEU 109 A GLU 110 n 110 GLU 110 A LYS 111 n 111 LYS 111 A ILE 112 n 112 ILE 112 A ASP 113 n 113 ASP 113 A ILE 114 n 114 ILE 114 A THR 115 n 115 THR 115 A PHE 116 n 116 PHE 116 A ASN 117 n 117 ASN 117 A GLU 118 n 118 GLU 118 A LEU 119 n 119 LEU 119 A ASP 120 n 120 ASP 120 A LEU 121 n 121 LEU 121 A SER 122 n 122 SER 122 A GLY 123 n 123 GLY 123 A GLU 124 n 124 GLU 124 A PHE 125 n 125 PHE 125 A ASP 126 n 126 ASP 126 A SER 127 n 127 SER 127 A GLY 128 n 128 GLY 128 A LYS 129 n 129 LYS 129 A SER 130 n 130 SER 130 A MET 131 n 131 MET 131 A THR 132 n 132 THR 132 A GLU 133 n 133 GLU 133 A ASN 134 n 134 ASN 134 A HIS 135 n 135 HIS 135 A GLN 136 n 136 GLN 136 A GLY 137 n 137 GLY 137 A ASP 138 n 138 ASP 138 A MET 139 n 139 MET 139 A HIS 140 n 140 HIS 140 A LYS 141 n 141 LYS 141 A SER 142 n 142 SER 142 A VAL 143 n 143 VAL 143 A ARG 144 n 144 ARG 144 A GLY 145 n 145 GLY 145 A LEU 146 n 146 LEU 146 A MET 147 n 147 MET 147 A LYS 148 n 148 LYS 148 A GLY 149 n 149 GLY 149 A ASN 150 n 150 ASN 150 A PRO 151 n 151 PRO 151 A ASP 152 n 152 ASP 152 A PRO 153 n 153 PRO 153 A MET 154 n 154 MET 154 A LEU 155 n 155 LEU 155 A GLU 156 n 156 GLU 156 A VAL 157 n 157 VAL 157 A MET 158 n 158 MET 158 A LYS 159 n 159 LYS 159 A ALA 160 n 160 ALA 160 A LYS 161 n 161 LYS 161 A GLY 162 n 162 GLY 162 A ILE 163 n 163 ILE 163 A ASN 164 n 164 ASN 164 A VAL 165 n 165 VAL 165 A ASP 166 n 166 ASP 166 A THR 167 n 167 THR 167 A ALA 168 n 168 ALA 168 A PHE 169 n 169 PHE 169 A LYS 170 n 170 LYS 170 A ASP 171 n 171 ASP 171 A LEU 172 n 172 LEU 172 A SER 173 n 173 SER 173 A ILE 174 n 174 ILE 174 A ALA 175 n 175 ALA 175 A SER 176 n 176 SER 176 A GLN 177 n 177 GLN 177 A TYR 178 n 178 TYR 178 A PRO 179 n 179 PRO 179 A ASP 180 n 180 ASP 180 A SER 181 n 181 SER 181 A GLY 182 n 182 GLY 182 A TYR 183 n 183 TYR 183 A MET 184 n 184 MET 184 A n 185 185 A n 186 186 A n 187 187 A n 188 188 A n 189 189 A n 190 190 A n 191 191 A n 192 192 A n 193 193 A author_and_software_defined_assembly PISA 1 monomeric A PHE 169 A O PHE 169 1_555 A NA 201 B NA NA 1_555 A LEU 172 A O LEU 172 1_555 87.4 A PHE 169 A O PHE 169 1_555 A NA 201 B NA NA 1_555 A ALA 175 A O ALA 175 1_555 105.0 A LEU 172 A O LEU 172 1_555 A NA 201 B NA NA 1_555 A ALA 175 A O ALA 175 1_555 71.5 A PHE 169 A O PHE 169 1_555 A NA 201 B NA NA 1_555 A HOH 361 C O HOH 1_555 97.1 A LEU 172 A O LEU 172 1_555 A NA 201 B NA NA 1_555 A HOH 361 C O HOH 1_555 152.2 A ALA 175 A O ALA 175 1_555 A NA 201 B NA NA 1_555 A HOH 361 C O HOH 1_555 80.9 A PHE 169 A O PHE 169 1_555 A NA 201 B NA NA 1_555 A HOH 513 C O HOH 1_555 125.7 A LEU 172 A O LEU 172 1_555 A NA 201 B NA NA 1_555 A HOH 513 C O HOH 1_555 82.8 A ALA 175 A O ALA 175 1_555 A NA 201 B NA NA 1_555 A HOH 513 C O HOH 1_555 121.4 A HOH 361 C O HOH 1_555 A NA 201 B NA NA 1_555 A HOH 513 C O HOH 1_555 115.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 42 A N SER 42 A O ALA 56 A O ALA 56 A N TYR 55 A N TYR 55 A O ALA 69 A O ALA 69 A N ILE 68 A N ILE 68 A O GLN 91 A O GLN 91 A N ILE 87 A N ILE 87 A O LEU 121 A O LEU 121 A N SER 42 A N SER 42 A O ALA 56 A O ALA 56 A N TYR 55 A N TYR 55 A O ALA 69 A O ALA 69 A N ILE 68 A N ILE 68 A O GLN 91 A O GLN 91 A N LEU 90 A N LEU 90 A O PHE 116 A O PHE 116 A O ASN 117 A O ASN 117 A N THR 4 A N THR 4 A N ILE 5 A N ILE 5 A O SER 176 A O SER 176 1 A CD LYS 111 A CD LYS 111 1 Y 1 A CE LYS 111 A CE LYS 111 1 Y 1 A NZ LYS 111 A NZ LYS 111 1 Y 1 A CE LYS 129 A CE LYS 129 1 Y 1 A NZ LYS 129 A NZ LYS 129 1 Y 1 A MET 1 A MET 1 1 Y 1 A THR 48 A THR 48 1 Y 1 A LEU 49 A LEU 49 1 Y 1 A SER 185 A SER 185 1 Y 1 A ASP 186 A ASP 186 1 Y 1 A ALA 187 A ALA 187 1 Y 1 A PRO 188 A PRO 188 1 Y 1 A MET 189 A MET 189 1 Y 1 A VAL 190 A VAL 190 1 Y 1 A ASP 191 A ASP 191 1 Y 1 A THR 192 A THR 192 1 Y 1 A VAL 193 A VAL 193 1 Y 1 A A O O THR HOH 37 473 2.17 1 12.18 1.60 100.20 112.38 A A A CG SD CE MET MET MET 67 67 67 A A A N 1 A PHE 77 54.20 -143.10 1 A ASP 95 64.32 68.46 42.380 16.9167 6.510 0.1460 0.1387 0.1391 1.1000 33.0360 3844 76478 5.0300 99.9500 1.000 0.370 0.0800 RANDOM 1 1.720 MOLECULAR REPLACEMENT 11.0700 0.9000 1.1100 PDB entry 1DK0 ML FLAT BULK SOLVENT MODEL 1.1000 33.0360 220 1602 1 0 1381 0.010 1505 1.214 2051 0.092 213 0.009 276 13.080 580 0.2149 0.2011 1.1139 134 2651 2785 27 100.0000 0.1948 0.1852 1.1286 130 2652 2782 27 100.0000 0.1940 0.1639 1.1441 148 2640 2788 27 100.0000 0.1621 0.1576 1.1604 153 2631 2784 27 100.0000 0.1631 0.1414 1.1777 134 2676 2810 27 100.0000 0.1550 0.1424 1.1961 121 2679 2800 27 100.0000 0.1586 0.1354 1.2157 145 2658 2803 27 100.0000 0.1433 0.1325 1.2367 145 2652 2797 27 100.0000 0.1331 0.1233 1.2592 142 2662 2804 27 100.0000 0.1587 0.1228 1.2834 133 2668 2801 27 100.0000 0.1325 0.1144 1.3096 148 2662 2810 27 100.0000 0.1431 0.1073 1.3381 130 2659 2789 27 100.0000 0.1322 0.1067 1.3692 138 2678 2816 27 100.0000 0.1337 0.1066 1.4034 146 2675 2821 27 100.0000 0.1181 0.1029 1.4414 147 2660 2807 27 100.0000 0.1354 0.0997 1.4838 141 2676 2817 27 100.0000 0.1184 0.1003 1.5317 155 2696 2851 27 100.0000 0.1085 0.0991 1.5864 140 2671 2811 27 100.0000 0.1083 0.1062 1.6500 141 2674 2815 27 100.0000 0.1247 0.1118 1.7251 145 2703 2848 27 100.0000 0.1328 0.1186 1.8160 137 2706 2843 27 100.0000 0.1305 0.1249 1.9298 144 2692 2836 27 100.0000 0.1342 0.1275 2.0787 163 2716 2879 27 100.0000 0.1428 0.1334 2.2879 148 2720 2868 27 100.0000 0.1768 0.1494 2.6188 135 2764 2899 27 100.0000 0.1455 0.1712 3.2990 166 2763 2929 27 100.0000 0.1676 0.1617 33.0510 135 2950 3085 27 100.0000 1.100 51.255 4JER 76552 76552 0 -3 0.042 1 21.8 8.300 100.000 0.755 1.10 1.12 2.9 3745 1 8.2 100 data reduction Andrew G.W. Leslie andrew@mrc-lmb.cam.ac.uk http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ MOSFLM package data scaling Phil R. Evans pre@mrc-lmb.cam.ac.uk 11/07/12 Fortran_77 http://www.ccp4.ac.uk/dist/html/scala.html SCALA other 0.1.27 phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package dev_1131 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection JDirector data reduction XDS 1.1A resolution Apo structure of the hemophore HasA from Yersinia pestis (Tetragonal Form) 1 N N 2 N N 3 N N A SER 9 A SER 9 HELX_P A ALA 12 A ALA 12 5 1 4 A SER 15 A SER 15 HELX_P A GLY 28 A GLY 28 1 2 14 A ASP 29 A ASP 29 HELX_P A ALA 33 A ALA 33 5 3 5 A PRO 34 A PRO 34 HELX_P A LYS 38 A LYS 38 5 4 5 A GLY 102 A GLY 102 HELX_P A ALA 105 A ALA 105 5 5 4 A SER 130 A SER 130 HELX_P A HIS 135 A HIS 135 1 6 6 A GLY 137 A GLY 137 HELX_P A LYS 148 A LYS 148 1 7 12 A PRO 151 A PRO 151 HELX_P A LYS 161 A LYS 161 1 8 11 A ALA 168 A ALA 168 HELX_P A LEU 172 A LEU 172 5 9 5 metalc 2.795 A PHE 169 A O PHE 169 1_555 A NA 201 B NA NA 1_555 metalc 2.739 A LEU 172 A O LEU 172 1_555 A NA 201 B NA NA 1_555 metalc 2.834 A ALA 175 A O ALA 175 1_555 A NA 201 B NA NA 1_555 metalc 2.751 A NA 201 B NA NA 1_555 A HOH 361 C O HOH 1_555 metalc 2.698 A NA 201 B NA NA 1_555 A HOH 513 C O HOH 1_555 TRANSPORT PROTEIN HEME BINDING PROTEIN, TRANSPORT PROTEIN A MET 78 A MET 78 1 A PRO 79 A PRO 79 -2.65 A MET 78 A MET 78 1 A PRO 79 A PRO 79 -1.53 Q7CL15_YERPE UNP 1 1 Q7CL15 MSTTIQYNSNYADYSISSYLREWANNFGDIDQAPAETKDRGSFSGSSTLFSGTQYAIGSSHSNPEGMIAEGDLKYSFMPQ HTFHGQIDTLQFGKDLATNAGGPSAGKHLEKIDITFNELDLSGEFDSGKSMTENHQGDMHKSVRGLMKGNPDPMLEVMKA KGINVDTAFKDLSIASQYPDSGYMSDAPMVDTV 1 193 4JER 1 193 Q7CL15 A 1 1 193 5 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel A SER 42 A SER 42 A SER 44 A SER 44 A SER 51 A SER 51 A GLY 58 A GLY 58 A GLU 65 A GLU 65 A TYR 75 A TYR 75 A PHE 83 A PHE 83 A THR 98 A THR 98 A LEU 121 A LEU 121 A GLY 123 A GLY 123 A SER 42 A SER 42 A SER 44 A SER 44 A SER 51 A SER 51 A GLY 58 A GLY 58 A GLU 65 A GLU 65 A TYR 75 A TYR 75 A PHE 83 A PHE 83 A THR 98 A THR 98 A LYS 107 A LYS 107 A ASN 117 A ASN 117 A THR 4 A THR 4 A TYR 7 A TYR 7 A ALA 175 A ALA 175 A GLN 177 A GLN 177 BINDING SITE FOR RESIDUE NA A 201 A NA 201 Software 6 A PHE 169 A PHE 169 6 1_555 A LYS 170 A LYS 170 6 1_555 A LEU 172 A LEU 172 6 1_555 A ALA 175 A ALA 175 6 1_555 A HOH 361 C HOH 6 1_555 A HOH 513 C HOH 6 1_555 92 P 41 21 2