0.021151 0.000000 0.000000 0.000000 0.021151 0.000000 0.000000 0.000000 0.003425 0.00000 0.00000 0.00000 Miller, R.M. Paavilainen, V.O. Krishnan, S. Serafimova, I.M. Taunton, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 47.280 47.280 291.970 C11 H10 N4 O 214.223 (2S)-2-cyano-3-(1H-indazol-5-yl)propanamide non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Am.Chem.Soc. JACSAT 0004 0002-7863 135 5298 5301 10.1021/ja401221b 23540679 Electrophilic fragment-based design of reversible covalent kinase inhibitors. 2013 100 1 CCD 2009-08-18 ADSC QUANTUM 315r Double crystal, Si(111) SINGLE WAVELENGTH M x-ray 1 0.999974 1.0 8.2.1 ALS 0.999974 SYNCHROTRON ALS BEAMLINE 8.2.1 40067.551 Ribosomal protein S6 kinase alpha-3 2.7.11.1 1 man polymer 214.223 (2S)-2-cyano-3-(1H-indazol-5-yl)propanamide 1 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 42 nat water S6K-alpha-3, 90 kDa ribosomal protein S6 kinase 3, p90-RSK 3, p90RSK3, Insulin-stimulated protein kinase 1, ISPK-1, MAP kinase-activated protein kinase 1b, MAPK-activated protein kinase 1b, MAPKAP kinase 1b, MAPKAPK-1b, Ribosomal S6 kinase 2, RSK-2, pp90RSK2 no no AHHHHHHVDDDDKMQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAA TYSALNRNQSPVLEPVGRSTLAQRRGIKKITSTAL AHHHHHHVDDDDKMQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT PEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAA TYSALNRNQSPVLEPVGRSTLAQRRGIKKITSTAL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample RPS6KA3, ISPK1, MAPKAPK1B, RSK2 9606 Homo sapiens 562 Escherichia coli 1 2.04 39.65 VAPOR DIFFUSION, HANGING DROP 7.0 100 mM HEPES, 50 mM Ammonium Sulfate, 7.5% PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 repository Initial release Database references Database references 1 0 2013-04-10 1 1 2013-04-17 1 2 2013-04-24 RCSB Y RCSB 2013-02-28 REL REL 1LB (2S)-2-cyano-3-(1H-indazol-5-yl)propanamide NA SODIUM ION HOH water 1LB 801 2 1LB 1LB 801 A NA 1 3 NA NA 802 A HOH 901 4 HOH HOH 901 A HOH 903 4 HOH HOH 902 A HOH 905 4 HOH HOH 903 A HOH 907 4 HOH HOH 904 A HOH 908 4 HOH HOH 905 A HOH 910 4 HOH HOH 906 A HOH 911 4 HOH HOH 907 A HOH 912 4 HOH HOH 908 A HOH 913 4 HOH HOH 909 A HOH 914 4 HOH HOH 910 A HOH 915 4 HOH HOH 911 A HOH 916 4 HOH HOH 912 A HOH 917 4 HOH HOH 913 A HOH 918 4 HOH HOH 914 A HOH 919 4 HOH HOH 915 A HOH 920 4 HOH HOH 916 A HOH 922 4 HOH HOH 917 A HOH 923 4 HOH HOH 918 A HOH 924 4 HOH HOH 919 A HOH 925 4 HOH HOH 920 A HOH 927 4 HOH HOH 921 A HOH 928 4 HOH HOH 922 A HOH 929 4 HOH HOH 923 A HOH 930 4 HOH HOH 924 A HOH 931 4 HOH HOH 925 A HOH 932 4 HOH HOH 926 A HOH 933 4 HOH HOH 927 A HOH 934 4 HOH HOH 928 A HOH 936 4 HOH HOH 929 A HOH 937 4 HOH HOH 930 A HOH 939 4 HOH HOH 931 A HOH 940 4 HOH HOH 932 A HOH 941 4 HOH HOH 933 A HOH 943 4 HOH HOH 934 A HOH 944 4 HOH HOH 935 A HOH 945 4 HOH HOH 936 A HOH 946 4 HOH HOH 937 A HOH 947 4 HOH HOH 938 A HOH 948 4 HOH HOH 939 A HOH 949 4 HOH HOH 940 A HOH 950 4 HOH HOH 941 A HOH 951 4 HOH HOH 942 A n 1 386 A n 2 387 A n 3 388 A n 4 389 A n 5 390 A n 6 391 A n 7 392 A n 8 393 A n 9 394 A n 10 395 A n 11 396 A n 12 397 A n 13 398 A n 14 399 A n 15 400 A n 16 401 A n 17 402 A n 18 403 A n 19 404 A n 20 405 A SER 406 n 21 SER 406 A ILE 407 n 22 ILE 407 A VAL 408 n 23 VAL 408 A GLN 409 n 24 GLN 409 A GLN 410 n 25 GLN 410 A LEU 411 n 26 LEU 411 A HIS 412 n 27 HIS 412 A ARG 413 n 28 ARG 413 A ASN 414 n 29 ASN 414 A SER 415 n 30 SER 415 A ILE 416 n 31 ILE 416 A GLN 417 n 32 GLN 417 A PHE 418 n 33 PHE 418 A THR 419 n 34 THR 419 A ASP 420 n 35 ASP 420 A GLY 421 n 36 GLY 421 A TYR 422 n 37 TYR 422 A GLU 423 n 38 GLU 423 A VAL 424 n 39 VAL 424 A LYS 425 n 40 LYS 425 A GLU 426 n 41 GLU 426 A ASP 427 n 42 ASP 427 A ILE 428 n 43 ILE 428 A n 44 429 A n 45 430 A n 46 431 A n 47 432 A n 48 433 A SER 434 n 49 SER 434 A VAL 435 n 50 VAL 435 A CYS 436 n 51 CYS 436 A LYS 437 n 52 LYS 437 A ARG 438 n 53 ARG 438 A CYS 439 n 54 CYS 439 A ILE 440 n 55 ILE 440 A HIS 441 n 56 HIS 441 A LYS 442 n 57 LYS 442 A ALA 443 n 58 ALA 443 A THR 444 n 59 THR 444 A ASN 445 n 60 ASN 445 A MET 446 n 61 MET 446 A GLU 447 n 62 GLU 447 A PHE 448 n 63 PHE 448 A ALA 449 n 64 ALA 449 A VAL 450 n 65 VAL 450 A LYS 451 n 66 LYS 451 A ILE 452 n 67 ILE 452 A ILE 453 n 68 ILE 453 A ASP 454 n 69 ASP 454 A LYS 455 n 70 LYS 455 A SER 456 n 71 SER 456 A LYS 457 n 72 LYS 457 A ARG 458 n 73 ARG 458 A ASP 459 n 74 ASP 459 A PRO 460 n 75 PRO 460 A THR 461 n 76 THR 461 A GLU 462 n 77 GLU 462 A GLU 463 n 78 GLU 463 A ILE 464 n 79 ILE 464 A GLU 465 n 80 GLU 465 A ILE 466 n 81 ILE 466 A LEU 467 n 82 LEU 467 A LEU 468 n 83 LEU 468 A ARG 469 n 84 ARG 469 A TYR 470 n 85 TYR 470 A GLY 471 n 86 GLY 471 A GLN 472 n 87 GLN 472 A HIS 473 n 88 HIS 473 A PRO 474 n 89 PRO 474 A ASN 475 n 90 ASN 475 A ILE 476 n 91 ILE 476 A ILE 477 n 92 ILE 477 A THR 478 n 93 THR 478 A LEU 479 n 94 LEU 479 A LYS 480 n 95 LYS 480 A ASP 481 n 96 ASP 481 A VAL 482 n 97 VAL 482 A TYR 483 n 98 TYR 483 A ASP 484 n 99 ASP 484 A ASP 485 n 100 ASP 485 A GLY 486 n 101 GLY 486 A LYS 487 n 102 LYS 487 A TYR 488 n 103 TYR 488 A VAL 489 n 104 VAL 489 A TYR 490 n 105 TYR 490 A VAL 491 n 106 VAL 491 A VAL 492 n 107 VAL 492 A THR 493 n 108 THR 493 A GLU 494 n 109 GLU 494 A LEU 495 n 110 LEU 495 A MET 496 n 111 MET 496 A LYS 497 n 112 LYS 497 A GLY 498 n 113 GLY 498 A GLY 499 n 114 GLY 499 A GLU 500 n 115 GLU 500 A LEU 501 n 116 LEU 501 A LEU 502 n 117 LEU 502 A ASP 503 n 118 ASP 503 A LYS 504 n 119 LYS 504 A ILE 505 n 120 ILE 505 A LEU 506 n 121 LEU 506 A ARG 507 n 122 ARG 507 A GLN 508 n 123 GLN 508 A LYS 509 n 124 LYS 509 A PHE 510 n 125 PHE 510 A PHE 511 n 126 PHE 511 A SER 512 n 127 SER 512 A GLU 513 n 128 GLU 513 A ARG 514 n 129 ARG 514 A GLU 515 n 130 GLU 515 A ALA 516 n 131 ALA 516 A SER 517 n 132 SER 517 A ALA 518 n 133 ALA 518 A VAL 519 n 134 VAL 519 A LEU 520 n 135 LEU 520 A PHE 521 n 136 PHE 521 A THR 522 n 137 THR 522 A ILE 523 n 138 ILE 523 A THR 524 n 139 THR 524 A LYS 525 n 140 LYS 525 A THR 526 n 141 THR 526 A VAL 527 n 142 VAL 527 A GLU 528 n 143 GLU 528 A TYR 529 n 144 TYR 529 A LEU 530 n 145 LEU 530 A HIS 531 n 146 HIS 531 A ALA 532 n 147 ALA 532 A GLN 533 n 148 GLN 533 A GLY 534 n 149 GLY 534 A VAL 535 n 150 VAL 535 A VAL 536 n 151 VAL 536 A HIS 537 n 152 HIS 537 A ARG 538 n 153 ARG 538 A ASP 539 n 154 ASP 539 A LEU 540 n 155 LEU 540 A LYS 541 n 156 LYS 541 A PRO 542 n 157 PRO 542 A SER 543 n 158 SER 543 A ASN 544 n 159 ASN 544 A ILE 545 n 160 ILE 545 A LEU 546 n 161 LEU 546 A TYR 547 n 162 TYR 547 A VAL 548 n 163 VAL 548 A ASP 549 n 164 ASP 549 A GLU 550 n 165 GLU 550 A SER 551 n 166 SER 551 A GLY 552 n 167 GLY 552 A ASN 553 n 168 ASN 553 A PRO 554 n 169 PRO 554 A GLU 555 n 170 GLU 555 A SER 556 n 171 SER 556 A ILE 557 n 172 ILE 557 A ARG 558 n 173 ARG 558 A ILE 559 n 174 ILE 559 A CYS 560 n 175 CYS 560 A ASP 561 n 176 ASP 561 A PHE 562 n 177 PHE 562 A GLY 563 n 178 GLY 563 A PHE 564 n 179 PHE 564 A ALA 565 n 180 ALA 565 A LYS 566 n 181 LYS 566 A GLN 567 n 182 GLN 567 A LEU 568 n 183 LEU 568 A ARG 569 n 184 ARG 569 A ALA 570 n 185 ALA 570 A GLU 571 n 186 GLU 571 A ASN 572 n 187 ASN 572 A GLY 573 n 188 GLY 573 A LEU 574 n 189 LEU 574 A LEU 575 n 190 LEU 575 A MET 576 n 191 MET 576 A THR 577 n 192 THR 577 A PRO 578 n 193 PRO 578 A CYS 579 n 194 CYS 579 A TYR 580 n 195 TYR 580 A THR 581 n 196 THR 581 A ALA 582 n 197 ALA 582 A ASN 583 n 198 ASN 583 A PHE 584 n 199 PHE 584 A VAL 585 n 200 VAL 585 A ALA 586 n 201 ALA 586 A PRO 587 n 202 PRO 587 A GLU 588 n 203 GLU 588 A VAL 589 n 204 VAL 589 A LEU 590 n 205 LEU 590 A GLU 591 n 206 GLU 591 A ARG 592 n 207 ARG 592 A GLN 593 n 208 GLN 593 A GLY 594 n 209 GLY 594 A TYR 595 n 210 TYR 595 A ASP 596 n 211 ASP 596 A ALA 597 n 212 ALA 597 A ALA 598 n 213 ALA 598 A CYS 599 n 214 CYS 599 A ASP 600 n 215 ASP 600 A ILE 601 n 216 ILE 601 A TRP 602 n 217 TRP 602 A SER 603 n 218 SER 603 A LEU 604 n 219 LEU 604 A GLY 605 n 220 GLY 605 A VAL 606 n 221 VAL 606 A LEU 607 n 222 LEU 607 A LEU 608 n 223 LEU 608 A TYR 609 n 224 TYR 609 A THR 610 n 225 THR 610 A MET 611 n 226 MET 611 A LEU 612 n 227 LEU 612 A THR 613 n 228 THR 613 A GLY 614 n 229 GLY 614 A TYR 615 n 230 TYR 615 A THR 616 n 231 THR 616 A PRO 617 n 232 PRO 617 A PHE 618 n 233 PHE 618 A ALA 619 n 234 ALA 619 A ASN 620 n 235 ASN 620 A GLY 621 n 236 GLY 621 A PRO 622 n 237 PRO 622 A ASP 623 n 238 ASP 623 A ASP 624 n 239 ASP 624 A THR 625 n 240 THR 625 A PRO 626 n 241 PRO 626 A GLU 627 n 242 GLU 627 A GLU 628 n 243 GLU 628 A ILE 629 n 244 ILE 629 A LEU 630 n 245 LEU 630 A ALA 631 n 246 ALA 631 A ARG 632 n 247 ARG 632 A ILE 633 n 248 ILE 633 A GLY 634 n 249 GLY 634 A SER 635 n 250 SER 635 A GLY 636 n 251 GLY 636 A LYS 637 n 252 LYS 637 A PHE 638 n 253 PHE 638 A SER 639 n 254 SER 639 A LEU 640 n 255 LEU 640 A SER 641 n 256 SER 641 A GLY 642 n 257 GLY 642 A GLY 643 n 258 GLY 643 A TYR 644 n 259 TYR 644 A TRP 645 n 260 TRP 645 A ASN 646 n 261 ASN 646 A SER 647 n 262 SER 647 A VAL 648 n 263 VAL 648 A SER 649 n 264 SER 649 A ASP 650 n 265 ASP 650 A THR 651 n 266 THR 651 A ALA 652 n 267 ALA 652 A LYS 653 n 268 LYS 653 A ASP 654 n 269 ASP 654 A LEU 655 n 270 LEU 655 A VAL 656 n 271 VAL 656 A SER 657 n 272 SER 657 A LYS 658 n 273 LYS 658 A MET 659 n 274 MET 659 A LEU 660 n 275 LEU 660 A HIS 661 n 276 HIS 661 A VAL 662 n 277 VAL 662 A ASP 663 n 278 ASP 663 A PRO 664 n 279 PRO 664 A HIS 665 n 280 HIS 665 A GLN 666 n 281 GLN 666 A ARG 667 n 282 ARG 667 A LEU 668 n 283 LEU 668 A THR 669 n 284 THR 669 A ALA 670 n 285 ALA 670 A ALA 671 n 286 ALA 671 A LEU 672 n 287 LEU 672 A VAL 673 n 288 VAL 673 A LEU 674 n 289 LEU 674 A ARG 675 n 290 ARG 675 A HIS 676 n 291 HIS 676 A PRO 677 n 292 PRO 677 A TRP 678 n 293 TRP 678 A ILE 679 n 294 ILE 679 A VAL 680 n 295 VAL 680 A HIS 681 n 296 HIS 681 A TRP 682 n 297 TRP 682 A ASP 683 n 298 ASP 683 A GLN 684 n 299 GLN 684 A LEU 685 n 300 LEU 685 A PRO 686 n 301 PRO 686 A GLN 687 n 302 GLN 687 A TYR 688 n 303 TYR 688 A GLN 689 n 304 GLN 689 A LEU 690 n 305 LEU 690 A ASN 691 n 306 ASN 691 A ARG 692 n 307 ARG 692 A GLN 693 n 308 GLN 693 A ASP 694 n 309 ASP 694 A ALA 695 n 310 ALA 695 A PRO 696 n 311 PRO 696 A HIS 697 n 312 HIS 697 A LEU 698 n 313 LEU 698 A VAL 699 n 314 VAL 699 A LYS 700 n 315 LYS 700 A GLY 701 n 316 GLY 701 A ALA 702 n 317 ALA 702 A MET 703 n 318 MET 703 A ALA 704 n 319 ALA 704 A ALA 705 n 320 ALA 705 A THR 706 n 321 THR 706 A TYR 707 n 322 TYR 707 A SER 708 n 323 SER 708 A ALA 709 n 324 ALA 709 A LEU 710 n 325 LEU 710 A ASN 711 n 326 ASN 711 A ARG 712 n 327 ARG 712 A n 328 713 A n 329 714 A n 330 715 A n 331 716 A n 332 717 A n 333 718 A n 334 719 A n 335 720 A n 336 721 A n 337 722 A n 338 723 A n 339 724 A n 340 725 A n 341 726 A n 342 727 A n 343 728 A n 344 729 A n 345 730 A n 346 731 A n 347 732 A n 348 733 A n 349 734 A n 350 735 A n 351 736 A n 352 737 A n 353 738 A n 354 739 A n 355 740 A 4.9769 0.6294 0.0691 6.0684 -0.9045 7.8275 -0.0085 0.0466 -0.6308 0.0567 0.4137 0.5115 -0.1955 -1.5951 -0.3290 0.3055 -0.1590 0.1021 0.5527 0.0343 0.3697 refined 9.2391 -34.7868 12.5373 X-RAY DIFFRACTION 1.7664 1.7361 -0.4471 3.1822 0.9468 3.8431 0.1069 0.1967 -0.0374 -0.4158 -0.0532 0.0428 -0.4660 -0.4064 -0.0121 0.4288 0.2385 0.0285 0.3235 -0.0081 0.3446 refined 22.2105 -21.8443 16.4952 X-RAY DIFFRACTION 3.9169 -0.8006 -0.7453 3.1883 0.1542 2.5296 -0.0147 -0.2486 0.4855 0.1339 0.0664 -0.1201 -0.8182 0.2018 -0.1215 0.7264 -0.0810 0.1101 0.1936 -0.0253 0.4167 refined 27.0133 -10.4746 29.3358 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' and (resseq 406:470) X-RAY DIFFRACTION 2 chain 'A' and (resseq 471:613) X-RAY DIFFRACTION 3 chain 'A' and (resseq 614:712) software_defined_assembly PISA 1 monomeric A ILE 476 A O ILE 91 1_555 A NA 802 C NA NA 1_555 A HIS 473 A O HIS 88 1_555 108.5 A ILE 476 A O ILE 91 1_555 A NA 802 C NA NA 1_555 A HOH 929 D O HOH 1_555 106.3 A HIS 473 A O HIS 88 1_555 A NA 802 C NA NA 1_555 A HOH 929 D O HOH 1_555 103.7 A ILE 476 A O ILE 91 1_555 A NA 802 C NA NA 1_555 A THR 478 A OG1 THR 93 1_555 98.3 A HIS 473 A O HIS 88 1_555 A NA 802 C NA NA 1_555 A THR 478 A OG1 THR 93 1_555 151.5 A HOH 929 D O HOH 1_555 A NA 802 C NA NA 1_555 A THR 478 A OG1 THR 93 1_555 58.3 A ILE 476 A O ILE 91 1_555 A NA 802 C NA NA 1_555 A GLY 471 A O GLY 86 1_555 112.5 A HIS 473 A O HIS 88 1_555 A NA 802 C NA NA 1_555 A GLY 471 A O GLY 86 1_555 98.9 A HOH 929 D O HOH 1_555 A NA 802 C NA NA 1_555 A GLY 471 A O GLY 86 1_555 125.3 A THR 478 A OG1 THR 93 1_555 A NA 802 C NA NA 1_555 A GLY 471 A O GLY 86 1_555 78.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 426 A N GLU 41 A O ARG 438 A O ARG 53 A N HIS 441 A N HIS 56 A O MET 446 A O MET 61 A N ALA 449 A N ALA 64 A O THR 493 A O THR 108 A O TYR 490 A O TYR 105 A N TYR 483 A N TYR 98 A N VAL 536 A N VAL 151 A O LYS 566 A O LYS 181 A N LEU 546 A N LEU 161 A O ARG 558 A O ARG 173 1 A OG SER 406 A OG SER 21 1 Y 1 A CG1 ILE 407 A CG1 ILE 22 1 Y 1 A CG2 ILE 407 A CG2 ILE 22 1 Y 1 A CD1 ILE 407 A CD1 ILE 22 1 Y 1 A CG GLN 410 A CG GLN 25 1 Y 1 A CD GLN 410 A CD GLN 25 1 Y 1 A OE1 GLN 410 A OE1 GLN 25 1 Y 1 A NE2 GLN 410 A NE2 GLN 25 1 Y 1 A CB HIS 412 A CB HIS 27 1 Y 1 A CG HIS 412 A CG HIS 27 1 Y 1 A ND1 HIS 412 A ND1 HIS 27 1 Y 1 A CD2 HIS 412 A CD2 HIS 27 1 Y 1 A CE1 HIS 412 A CE1 HIS 27 1 Y 1 A NE2 HIS 412 A NE2 HIS 27 1 Y 1 A CB ARG 413 A CB ARG 28 1 Y 1 A CG ARG 413 A CG ARG 28 1 Y 1 A CD ARG 413 A CD ARG 28 1 Y 1 A NE ARG 413 A NE ARG 28 1 Y 1 A CZ ARG 413 A CZ ARG 28 1 Y 1 A NH1 ARG 413 A NH1 ARG 28 1 Y 1 A NH2 ARG 413 A NH2 ARG 28 1 Y 1 A CG1 ILE 416 A CG1 ILE 31 1 Y 1 A CG2 ILE 416 A CG2 ILE 31 1 Y 1 A CD1 ILE 416 A CD1 ILE 31 1 Y 1 A CG ARG 458 A CG ARG 73 1 Y 1 A CD ARG 458 A CD ARG 73 1 Y 1 A NE ARG 458 A NE ARG 73 1 Y 1 A CZ ARG 458 A CZ ARG 73 1 Y 1 A NH1 ARG 458 A NH1 ARG 73 1 Y 1 A NH2 ARG 458 A NH2 ARG 73 1 Y 1 A CG GLU 591 A CG GLU 206 1 Y 1 A CD GLU 591 A CD GLU 206 1 Y 1 A OE1 GLU 591 A OE1 GLU 206 1 Y 1 A OE2 GLU 591 A OE2 GLU 206 1 Y 1 A OG SER 635 A OG SER 250 1 Y 1 A CG LYS 637 A CG LYS 252 1 Y 1 A CD LYS 637 A CD LYS 252 1 Y 1 A CE LYS 637 A CE LYS 252 1 Y 1 A NZ LYS 637 A NZ LYS 252 1 Y 1 A CG ARG 712 A CG ARG 327 1 Y 1 A CD ARG 712 A CD ARG 327 1 Y 1 A NE ARG 712 A NE ARG 327 1 Y 1 A CZ ARG 712 A CZ ARG 327 1 Y 1 A NH1 ARG 712 A NH1 ARG 327 1 Y 1 A NH2 ARG 712 A NH2 ARG 327 1 Y 1 A ALA 386 A ALA 1 1 Y 1 A HIS 387 A HIS 2 1 Y 1 A HIS 388 A HIS 3 1 Y 1 A HIS 389 A HIS 4 1 Y 1 A HIS 390 A HIS 5 1 Y 1 A HIS 391 A HIS 6 1 Y 1 A HIS 392 A HIS 7 1 Y 1 A VAL 393 A VAL 8 1 Y 1 A ASP 394 A ASP 9 1 Y 1 A ASP 395 A ASP 10 1 Y 1 A ASP 396 A ASP 11 1 Y 1 A ASP 397 A ASP 12 1 Y 1 A LYS 398 A LYS 13 1 Y 1 A MET 399 A MET 14 1 Y 1 A GLN 400 A GLN 15 1 Y 1 A THR 401 A THR 16 1 Y 1 A VAL 402 A VAL 17 1 Y 1 A GLY 403 A GLY 18 1 Y 1 A VAL 404 A VAL 19 1 Y 1 A HIS 405 A HIS 20 1 Y 1 A GLY 429 A GLY 44 1 Y 1 A VAL 430 A VAL 45 1 Y 1 A GLY 431 A GLY 46 1 Y 1 A SER 432 A SER 47 1 Y 1 A TYR 433 A TYR 48 1 Y 1 A ASN 713 A ASN 328 1 Y 1 A GLN 714 A GLN 329 1 Y 1 A SER 715 A SER 330 1 Y 1 A PRO 716 A PRO 331 1 Y 1 A VAL 717 A VAL 332 1 Y 1 A LEU 718 A LEU 333 1 Y 1 A GLU 719 A GLU 334 1 Y 1 A PRO 720 A PRO 335 1 Y 1 A VAL 721 A VAL 336 1 Y 1 A GLY 722 A GLY 337 1 Y 1 A ARG 723 A ARG 338 1 Y 1 A SER 724 A SER 339 1 Y 1 A THR 725 A THR 340 1 Y 1 A LEU 726 A LEU 341 1 Y 1 A ALA 727 A ALA 342 1 Y 1 A GLN 728 A GLN 343 1 Y 1 A ARG 729 A ARG 344 1 Y 1 A ARG 730 A ARG 345 1 Y 1 A GLY 731 A GLY 346 1 Y 1 A ILE 732 A ILE 347 1 Y 1 A LYS 733 A LYS 348 1 Y 1 A LYS 734 A LYS 349 1 Y 1 A ILE 735 A ILE 350 1 Y 1 A THR 736 A THR 351 1 Y 1 A SER 737 A SER 352 1 Y 1 A THR 738 A THR 353 1 Y 1 A ALA 739 A ALA 354 1 Y 1 A LEU 740 A LEU 355 1 Y 1 A A OE2 H GLU GLN 462 567 1.56 1 A A OG OE1 SER GLU 512 515 2.15 1 A A O O ASN HOH 691 931 2.16 1 A A OD1 NH1 ASP ARG 503 507 2.16 1 A A OE1 O GLN HOH 409 925 2.19 1 A HIS 412 49.93 -143.00 1 A LYS 457 -124.82 -62.83 1 A ASP 459 63.06 74.57 1 A ASP 481 175.64 162.30 1 A ARG 538 70.87 -14.77 1 A ASP 561 59.04 73.34 2.3931 0.0000 -0.0000 2.3931 -0.0000 -4.7862 0.2986 0.2521 0.2543 2.600 46.672 537 11115 11112 4.83 99.97 1.000 1.000 0.86 1 1.35 MOLECULAR REPLACEMENT 31.39 0.65 0.80 ML FLAT BULK SOLVENT MODEL 40.689 0.378 2.600 46.672 42 2423 17 0 2364 0.013 2439 0.660 3327 10.058 879 0.043 370 0.003 424 0.4417 0.3668 2.8617 137 2535 100.00 0.3525 0.3015 3.2757 123 2579 100.00 0.3110 0.2446 4.1266 144 2614 100.00 0.2442 0.2177 46.6795 133 2847 100.00 2.6 48.66 4JG6 11112 3.0 3.0 1 99.9 2.60 2.76 1 99.7 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.7.1_743 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection Blu-Ice data reduction XDS phasing PHENIX Ribosomal protein S6 kinase alpha-3 (E.C.2.7.11.1) RSK2 CTD bound to 2-cyano-3-(1H-indazol-5-yl)acrylamide 1 N N 2 N N 3 N N 4 N N A GLN 417 A GLN 32 HELX_P A GLY 421 A GLY 36 1 1 5 A PRO 460 A PRO 75 HELX_P A GLY 471 A GLY 86 1 2 12 A GLU 500 A GLU 115 HELX_P A ARG 507 A ARG 122 1 3 8 A SER 512 A SER 127 HELX_P A GLN 533 A GLN 148 1 4 22 A LYS 541 A LYS 156 HELX_P A SER 543 A SER 158 5 5 3 A ASN 553 A ASN 168 HELX_P A GLU 555 A GLU 170 5 6 3 A ALA 586 A ALA 201 HELX_P A GLY 614 A GLY 229 1 7 29 A THR 625 A THR 240 HELX_P A GLY 634 A GLY 249 1 8 10 A GLY 642 A GLY 257 HELX_P A ASN 646 A ASN 261 5 9 5 A SER 649 A SER 264 HELX_P A LEU 660 A LEU 275 1 10 12 A ASP 663 A ASP 278 HELX_P A ARG 667 A ARG 282 5 11 5 A THR 669 A THR 284 HELX_P A ARG 675 A ARG 290 1 12 7 A HIS 676 A HIS 291 HELX_P A HIS 681 A HIS 296 1 13 6 A ALA 695 A ALA 310 HELX_P A ASN 711 A ASN 326 1 14 17 covale 1.830 A CYS 436 A SG CYS 51 1_555 A 1LB 801 B C07 1LB 1_555 metalc 2.003 A ILE 476 A O ILE 91 1_555 A NA 802 C NA NA 1_555 metalc 2.005 A HIS 473 A O HIS 88 1_555 A NA 802 C NA NA 1_555 metalc 2.418 A NA 802 C NA NA 1_555 A HOH 929 D O HOH 1_555 metalc 2.491 A THR 478 A OG1 THR 93 1_555 A NA 802 C NA NA 1_555 metalc 2.527 A GLY 471 A O GLY 86 1_555 A NA 802 C NA NA 1_555 TRANSFERASE/TRANSFERASE INHIBITOR Protein Kinase, Phosphorylation, Covalent Inhibitor, TRANSFERASE-TRANSFERASE INHIBITOR complex KS6A3_HUMAN UNP 1 399 P51812 MQTVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIR ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVL EPVGRSTLAQRRGIKKITSTAL 399 740 4JG6 399 740 P51812 A 1 14 355 1 EXPRESSION TAG ALA 386 4JG6 A P51812 UNP 1 1 EXPRESSION TAG HIS 387 4JG6 A P51812 UNP 2 1 EXPRESSION TAG HIS 388 4JG6 A P51812 UNP 3 1 EXPRESSION TAG HIS 389 4JG6 A P51812 UNP 4 1 EXPRESSION TAG HIS 390 4JG6 A P51812 UNP 5 1 EXPRESSION TAG HIS 391 4JG6 A P51812 UNP 6 1 EXPRESSION TAG HIS 392 4JG6 A P51812 UNP 7 1 EXPRESSION TAG VAL 393 4JG6 A P51812 UNP 8 1 EXPRESSION TAG ASP 394 4JG6 A P51812 UNP 9 1 EXPRESSION TAG ASP 395 4JG6 A P51812 UNP 10 1 EXPRESSION TAG ASP 396 4JG6 A P51812 UNP 11 1 EXPRESSION TAG ASP 397 4JG6 A P51812 UNP 12 1 EXPRESSION TAG LYS 398 4JG6 A P51812 UNP 13 1 LYS CLONING ARTIFACT GLU 591 4JG6 A P51812 UNP 591 206 5 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 422 A TYR 37 A ASP 427 A ASP 42 A VAL 435 A VAL 50 A HIS 441 A HIS 56 A MET 446 A MET 61 A ASP 454 A ASP 69 A TYR 488 A TYR 103 A THR 493 A THR 108 A LEU 479 A LEU 94 A ASP 484 A ASP 99 A VAL 535 A VAL 150 A VAL 536 A VAL 151 A LYS 566 A LYS 181 A GLN 567 A GLN 182 A ILE 545 A ILE 160 A TYR 547 A TYR 162 A ILE 557 A ILE 172 A ILE 559 A ILE 174 BINDING SITE FOR RESIDUE 1LB A 801 Software 7 BINDING SITE FOR RESIDUE NA A 802 Software 5 A CYS 436 A CYS 51 7 1_555 A ALA 449 A ALA 64 7 1_555 A LYS 451 A LYS 66 7 1_555 A THR 493 A THR 108 7 1_555 A GLU 494 A GLU 109 7 1_555 A MET 496 A MET 111 7 1_555 A ASP 561 A ASP 176 7 1_555 A GLY 471 A GLY 86 5 1_555 A HIS 473 A HIS 88 5 1_555 A ILE 476 A ILE 91 5 1_555 A THR 478 A THR 93 5 1_555 A HOH 929 D HOH 5 1_555 92 P 41 21 2