0.029240
0.000000
0.000000
0.000000
0.017422
0.000000
0.000000
0.000000
0.005813
0.00000
0.00000
0.00000
Stura, E.A.
Vera, L.
Cassar-Lajeunesse, E.
Tranchant, I.
Amoura, M.
Dive, V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
34.200
57.400
172.030
C12 H10 O5
234.205
(7-methoxy-2-oxo-2H-chromen-4-yl)acetic acid
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
N3 -1
42.020
AZIDE ION
non-polymer
Ca 2
40.078
CALCIUM ION
non-polymer
C9 H10 N4 O6
270.199
n
3-[(2,4-dinitrophenyl)amino]-L-alanine
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C4 H10 O3
106.120
DI(HYDROXYETHYL)ETHER
non-polymer
C3 H8 O2
76.094
S-1,2-PROPANEDIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C9 H10 I N O2
291.086
n
IODO-PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
Sr 2
87.620
STRONTIUM ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
O
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
O
N
13
N
C
Y
14
N
C
Y
15
N
C
N
16
N
O
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
O
N
27
N
H
N
28
N
N
N
29
S
C
N
30
N
C
N
31
N
O
N
32
N
C
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
C
N
48
N
N
N
49
N
C
N
50
N
N
N
51
N
N
N
52
N
O
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
N
N
69
S
C
N
70
N
C
N
71
N
O
N
72
N
C
N
73
N
C
N
74
N
O
N
75
N
N
N
76
N
O
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
N
N
86
S
C
N
87
N
C
N
88
N
O
N
89
N
C
N
90
N
C
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
N
N
N
103
N
N
N
104
N
CA
N
105
N
N
N
106
S
C
N
107
N
C
N
108
N
N
Y
109
N
C
Y
110
N
C
N
111
N
N
N
112
N
O
N
113
N
O
Y
114
N
C
Y
115
N
C
N
116
N
N
N
117
N
O
N
118
N
O
Y
119
N
C
Y
120
N
C
N
121
N
C
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
O
N
133
N
H
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
N
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
N
N
165
S
C
N
166
N
C
N
167
N
O
N
168
N
C
N
169
N
C
N
170
N
C
N
171
N
O
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
N
C
N
185
N
C
N
186
N
O
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
Y
212
N
C
Y
213
N
N
Y
214
N
C
Y
215
N
C
Y
216
N
N
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
S
C
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
N
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
S
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
N
H
N
322
N
H
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
C
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
O
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
I
N
386
N
C
N
387
N
O
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
N
404
N
C
N
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
SR
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
R
C
N
436
N
O
N
437
N
C
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
N
N
449
S
C
N
450
N
C
N
451
N
O
N
452
N
C
Y
453
N
C
Y
454
N
C
Y
455
N
C
Y
456
N
N
Y
457
N
C
Y
458
N
C
Y
459
N
C
Y
460
N
C
Y
461
N
C
N
462
N
O
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
N
N
476
S
C
N
477
N
C
N
478
N
O
N
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
Y
484
N
C
Y
485
N
C
N
486
N
O
N
487
N
O
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
N
N
500
S
C
N
501
N
C
N
502
N
O
N
503
N
C
N
504
N
C
N
505
N
C
N
506
N
O
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
ZN
Y
1
N
doub
Y
2
N
sing
Y
3
N
sing
N
4
N
sing
N
5
N
sing
Y
6
N
doub
N
7
N
sing
N
8
N
sing
N
9
N
sing
Y
10
N
doub
N
11
N
doub
N
12
N
doub
Y
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
doub
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
doub
N
100
N
doub
N
101
N
sing
N
102
N
sing
Y
103
N
doub
Y
104
N
sing
Y
105
N
sing
Y
106
N
doub
Y
107
N
doub
Y
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
Y
208
N
sing
Y
209
N
doub
Y
210
N
doub
N
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
Y
346
N
doub
Y
347
N
sing
Y
348
N
sing
N
349
N
sing
Y
350
N
doub
N
351
N
sing
Y
352
N
doub
N
353
N
sing
Y
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
doub
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
Y
438
N
doub
Y
439
N
sing
Y
440
N
sing
N
441
N
sing
Y
442
N
doub
Y
443
N
sing
Y
444
N
sing
N
445
N
sing
Y
446
N
sing
Y
447
N
doub
N
448
N
sing
Y
449
N
doub
N
450
N
sing
Y
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
doub
N
473
N
sing
Y
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
doub
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
UK
Chem.Biol.
CBOLE2
2050
1074-5521
21
408
413
10.1016/j.chembiol.2014.01.008
24583051
Halogen Bonding Controls Selectivity of FRET Substrate Probes for MMP-9.
2014
10.2210/pdb4jij/pdb
pdb_00004jij
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
PIXEL
2012-02-17
DECTRIS PILATUS 6M
Channel cut Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.9184
1.0
PROXIMA 1
SOLEIL
0.9184
SYNCHROTRON
SOLEIL BEAMLINE PROXIMA 1
1253.063
fluorogenic peptidic substrate (8MC)PLG(PHI)(DNW)AR(NH2)
2
syn
polymer
18280.283
Matrix metalloproteinase-9
3.4.24.35
E402A
2
man
polymer
42.020
AZIDE ION
2
syn
non-polymer
65.409
ZINC ION
4
syn
non-polymer
40.078
CALCIUM ION
2
syn
non-polymer
87.620
STRONTIUM ION
4
syn
non-polymer
76.094
S-1,2-PROPANEDIOL
2
syn
non-polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
106.120
DI(HYDROXYETHYL)ETHER
1
syn
non-polymer
92.094
GLYCEROL
2
syn
non-polymer
18.015
water
410
nat
water
MMP-9, 92 kDa gelatinase, 92 kDa type IV collagenase, Gelatinase B, GELB, 67 kDa matrix metalloproteinase-9, 82 kDa matrix metalloproteinase-9
no
yes
(8MC)PLG(PHI)(DNW)AR(NH2)
XPLGFXARX
P,Q
polypeptide(L)
no
no
GFQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKD
GLLAHAFPPGPGIQGDAHFDDDELWSLGKGVGYSLFLVAAHAFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIR
HLYG
GFQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKD
GLLAHAFPPGPGIQGDAHFDDDELWSLGKGVGYSLFLVAAHAFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIR
HLYG
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
construct: 110 216 and 392 444 Mutagenesis: Glu402Ala Structure: renumbered omi
tting missing domain.
sample
2
111
CLG4B, MMP9
9606
Homo sapiens
562
Escherichia coli
BL21 (DE3 star)
PT7 promoter
pET-14b
human
construct: 110 216 and 392 444 Mutagenesis: Glu402Ala Structure: renumbered omi
tting missing domain.
sample
112
164
CLG4B, MMP9
9606
Homo sapiens
562
Escherichia coli
BL21 (DE3 star)
PT7 promoter
pET-14b
1
2.22
44.56
VAPOR DIFFUSION, SITTING DROP
6.0
Protein: 6 microL hMMP9(E402A) at 181 micro-M 0.12 M acetohydroxamic acid and 0.3 microL IT34-I at 6.9 mill-M. Reservoir: 10% PEG 20K, 0.1 M MMT (L-malic acid, MES, Tris) 75% acid/25% basic, 0.8 M NaCl, 0.02 SrCl2, 0.01% azide. Cryoprotectant: CryoProtX CM2, 0.8 M Li formate, 0.1 M (MMT 75% acid/25% basic), 9% PEG 10K, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
entity_src_gen
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Database references
Refinement description
Source and taxonomy
Data collection
Database references
Derived calculations
Refinement description
Data collection
1
0
2014-03-12
1
1
2014-04-16
1
2
2017-08-16
1
3
2023-09-20
1
4
2023-12-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
Crystal structure of an MMP broad spectrum hydroxamate based inhibitor CC27 in complex with the MMP-9 catalytic domain
Crystal structure of mutant MMP-9 catalytic domain in complex with a twin inhibitor.
CrystalCrystal structure of an MMP twin inhibitor complexing two MMP-9 catalytic domains structure of an MMP twin inhibitor complexing two MMP-9 catalytic domains
MMP-9 active site mutant with trifluoromethyl hydroxamate inhibitor
MMP-9 active site mutant with iodine-labeled carboxylate inhibitor
Crystal structure of an MMP twin carboxylate based inhibitor LC20 in complex with the MMP-9 catalytic domain
Crystal structure of mutant MMP-9 catalytic domain in complex with a twin inhibitor.
RCSB
Y
RCSB
2013-03-06
REL
REL
AZI
AZIDE ION
ZN
ZINC ION
CA
CALCIUM ION
SR
STRONTIUM ION
PGO
S-1,2-PROPANEDIOL
EDO
1,2-ETHANEDIOL
PEG
DI(HYDROXYETHYL)ETHER
GOL
GLYCEROL
HOH
water
fluorogenic synthetic L-peptide substrate with MMP-9 specificity.
sample
4H3X
PDB
experimental model
AZI
499
3
AZI
AZI
301
A
ZN
500
4
ZN
ZN
302
A
ZN
501
4
ZN
ZN
303
A
CA
502
5
CA
CA
304
A
SR
503
6
SR
SR
305
A
SR
504
6
SR
SR
306
A
PGO
2
7
PGO
PGO
307
A
EDO
3
8
EDO
EDO
308
A
EDO
6
8
EDO
EDO
309
A
PEG
8
9
PEG
PEG
310
A
GOL
10
10
GOL
GOL
311
A
AZI
499
3
AZI
AZI
101
Q
ZN
500
4
ZN
ZN
301
B
ZN
501
4
ZN
ZN
302
B
CA
502
5
CA
CA
303
B
SR
503
6
SR
SR
304
B
SR
504
6
SR
SR
305
B
PGO
1
7
PGO
PGO
306
B
EDO
4
8
EDO
EDO
307
B
EDO
7
8
EDO
EDO
308
B
GOL
9
10
GOL
GOL
309
B
HOH
33
11
HOH
HOH
101
P
HOH
54
11
HOH
HOH
102
P
HOH
123
11
HOH
HOH
103
P
HOH
124
11
HOH
HOH
104
P
HOH
126
11
HOH
HOH
105
P
HOH
127
11
HOH
HOH
106
P
HOH
198
11
HOH
HOH
107
P
HOH
199
11
HOH
HOH
108
P
HOH
207
11
HOH
HOH
109
P
HOH
220
11
HOH
HOH
110
P
HOH
243
11
HOH
HOH
111
P
HOH
268
11
HOH
HOH
112
P
HOH
361
11
HOH
HOH
113
P
HOH
434
11
HOH
HOH
114
P
HOH
1
11
HOH
HOH
401
A
HOH
2
11
HOH
HOH
402
A
HOH
3
11
HOH
HOH
403
A
HOH
4
11
HOH
HOH
404
A
HOH
5
11
HOH
HOH
405
A
HOH
6
11
HOH
HOH
406
A
HOH
8
11
HOH
HOH
407
A
HOH
9
11
HOH
HOH
408
A
HOH
11
11
HOH
HOH
409
A
HOH
12
11
HOH
HOH
410
A
HOH
28
11
HOH
HOH
411
A
HOH
29
11
HOH
HOH
412
A
HOH
30
11
HOH
HOH
413
A
HOH
31
11
HOH
HOH
414
A
HOH
32
11
HOH
HOH
415
A
HOH
34
11
HOH
HOH
416
A
HOH
35
11
HOH
HOH
417
A
HOH
36
11
HOH
HOH
418
A
HOH
37
11
HOH
HOH
419
A
HOH
38
11
HOH
HOH
420
A
HOH
39
11
HOH
HOH
421
A
HOH
40
11
HOH
HOH
422
A
HOH
41
11
HOH
HOH
423
A
HOH
42
11
HOH
HOH
424
A
HOH
43
11
HOH
HOH
425
A
HOH
44
11
HOH
HOH
426
A
HOH
55
11
HOH
HOH
427
A
HOH
56
11
HOH
HOH
428
A
HOH
57
11
HOH
HOH
429
A
HOH
58
11
HOH
HOH
430
A
HOH
59
11
HOH
HOH
431
A
HOH
60
11
HOH
HOH
432
A
HOH
61
11
HOH
HOH
433
A
HOH
62
11
HOH
HOH
434
A
HOH
63
11
HOH
HOH
435
A
HOH
64
11
HOH
HOH
436
A
HOH
65
11
HOH
HOH
437
A
HOH
67
11
HOH
HOH
438
A
HOH
68
11
HOH
HOH
439
A
HOH
69
11
HOH
HOH
440
A
HOH
70
11
HOH
HOH
441
A
HOH
74
11
HOH
HOH
442
A
HOH
95
11
HOH
HOH
443
A
HOH
96
11
HOH
HOH
444
A
HOH
97
11
HOH
HOH
445
A
HOH
107
11
HOH
HOH
446
A
HOH
108
11
HOH
HOH
447
A
HOH
109
11
HOH
HOH
448
A
HOH
110
11
HOH
HOH
449
A
HOH
111
11
HOH
HOH
450
A
HOH
112
11
HOH
HOH
451
A
HOH
113
11
HOH
HOH
452
A
HOH
114
11
HOH
HOH
453
A
HOH
115
11
HOH
HOH
454
A
HOH
117
11
HOH
HOH
455
A
HOH
118
11
HOH
HOH
456
A
HOH
119
11
HOH
HOH
457
A
HOH
120
11
HOH
HOH
458
A
HOH
121
11
HOH
HOH
459
A
HOH
125
11
HOH
HOH
460
A
HOH
128
11
HOH
HOH
461
A
HOH
129
11
HOH
HOH
462
A
HOH
131
11
HOH
HOH
463
A
HOH
132
11
HOH
HOH
464
A
HOH
133
11
HOH
HOH
465
A
HOH
134
11
HOH
HOH
466
A
HOH
135
11
HOH
HOH
467
A
HOH
154
11
HOH
HOH
468
A
HOH
156
11
HOH
HOH
469
A
HOH
157
11
HOH
HOH
470
A
HOH
169
11
HOH
HOH
471
A
HOH
176
11
HOH
HOH
472
A
HOH
178
11
HOH
HOH
473
A
HOH
179
11
HOH
HOH
474
A
HOH
180
11
HOH
HOH
475
A
HOH
181
11
HOH
HOH
476
A
HOH
182
11
HOH
HOH
477
A
HOH
183
11
HOH
HOH
478
A
HOH
184
11
HOH
HOH
479
A
HOH
192
11
HOH
HOH
480
A
HOH
193
11
HOH
HOH
481
A
HOH
194
11
HOH
HOH
482
A
HOH
195
11
HOH
HOH
483
A
HOH
196
11
HOH
HOH
484
A
HOH
197
11
HOH
HOH
485
A
HOH
200
11
HOH
HOH
486
A
HOH
201
11
HOH
HOH
487
A
HOH
203
11
HOH
HOH
488
A
HOH
204
11
HOH
HOH
489
A
HOH
205
11
HOH
HOH
490
A
HOH
206
11
HOH
HOH
491
A
HOH
208
11
HOH
HOH
492
A
HOH
209
11
HOH
HOH
493
A
HOH
215
11
HOH
HOH
494
A
HOH
219
11
HOH
HOH
495
A
HOH
223
11
HOH
HOH
496
A
HOH
225
11
HOH
HOH
497
A
HOH
226
11
HOH
HOH
498
A
HOH
227
11
HOH
HOH
499
A
HOH
228
11
HOH
HOH
500
A
HOH
229
11
HOH
HOH
501
A
HOH
230
11
HOH
HOH
502
A
HOH
231
11
HOH
HOH
503
A
HOH
232
11
HOH
HOH
504
A
HOH
233
11
HOH
HOH
505
A
HOH
234
11
HOH
HOH
506
A
HOH
235
11
HOH
HOH
507
A
HOH
237
11
HOH
HOH
508
A
HOH
238
11
HOH
HOH
509
A
HOH
239
11
HOH
HOH
510
A
HOH
240
11
HOH
HOH
511
A
HOH
244
11
HOH
HOH
512
A
HOH
246
11
HOH
HOH
513
A
HOH
247
11
HOH
HOH
514
A
HOH
248
11
HOH
HOH
515
A
HOH
249
11
HOH
HOH
516
A
HOH
250
11
HOH
HOH
517
A
HOH
251
11
HOH
HOH
518
A
HOH
252
11
HOH
HOH
519
A
HOH
253
11
HOH
HOH
520
A
HOH
254
11
HOH
HOH
521
A
HOH
257
11
HOH
HOH
522
A
HOH
261
11
HOH
HOH
523
A
HOH
266
11
HOH
HOH
524
A
HOH
267
11
HOH
HOH
525
A
HOH
269
11
HOH
HOH
526
A
HOH
270
11
HOH
HOH
527
A
HOH
271
11
HOH
HOH
528
A
HOH
274
11
HOH
HOH
529
A
HOH
275
11
HOH
HOH
530
A
HOH
276
11
HOH
HOH
531
A
HOH
281
11
HOH
HOH
532
A
HOH
282
11
HOH
HOH
533
A
HOH
283
11
HOH
HOH
534
A
HOH
297
11
HOH
HOH
535
A
HOH
298
11
HOH
HOH
536
A
HOH
299
11
HOH
HOH
537
A
HOH
300
11
HOH
HOH
538
A
HOH
301
11
HOH
HOH
539
A
HOH
302
11
HOH
HOH
540
A
HOH
310
11
HOH
HOH
541
A
HOH
342
11
HOH
HOH
542
A
HOH
343
11
HOH
HOH
543
A
HOH
344
11
HOH
HOH
544
A
HOH
345
11
HOH
HOH
545
A
HOH
348
11
HOH
HOH
546
A
HOH
349
11
HOH
HOH
547
A
HOH
350
11
HOH
HOH
548
A
HOH
351
11
HOH
HOH
549
A
HOH
352
11
HOH
HOH
550
A
HOH
353
11
HOH
HOH
551
A
HOH
354
11
HOH
HOH
552
A
HOH
356
11
HOH
HOH
553
A
HOH
357
11
HOH
HOH
554
A
HOH
358
11
HOH
HOH
555
A
HOH
359
11
HOH
HOH
556
A
HOH
362
11
HOH
HOH
557
A
HOH
363
11
HOH
HOH
558
A
HOH
364
11
HOH
HOH
559
A
HOH
365
11
HOH
HOH
560
A
HOH
366
11
HOH
HOH
561
A
HOH
367
11
HOH
HOH
562
A
HOH
368
11
HOH
HOH
563
A
HOH
369
11
HOH
HOH
564
A
HOH
373
11
HOH
HOH
565
A
HOH
374
11
HOH
HOH
566
A
HOH
375
11
HOH
HOH
567
A
HOH
382
11
HOH
HOH
568
A
HOH
391
11
HOH
HOH
569
A
HOH
392
11
HOH
HOH
570
A
HOH
394
11
HOH
HOH
571
A
HOH
395
11
HOH
HOH
572
A
HOH
398
11
HOH
HOH
573
A
HOH
403
11
HOH
HOH
574
A
HOH
405
11
HOH
HOH
575
A
HOH
413
11
HOH
HOH
576
A
HOH
414
11
HOH
HOH
577
A
HOH
415
11
HOH
HOH
578
A
HOH
416
11
HOH
HOH
579
A
HOH
423
11
HOH
HOH
580
A
HOH
424
11
HOH
HOH
581
A
HOH
426
11
HOH
HOH
582
A
HOH
429
11
HOH
HOH
583
A
HOH
430
11
HOH
HOH
584
A
HOH
431
11
HOH
HOH
585
A
HOH
435
11
HOH
HOH
586
A
HOH
437
11
HOH
HOH
587
A
HOH
439
11
HOH
HOH
588
A
HOH
17
11
HOH
HOH
201
Q
HOH
82
11
HOH
HOH
202
Q
HOH
83
11
HOH
HOH
203
Q
HOH
84
11
HOH
HOH
204
Q
HOH
333
11
HOH
HOH
205
Q
HOH
334
11
HOH
HOH
206
Q
HOH
335
11
HOH
HOH
207
Q
HOH
340
11
HOH
HOH
208
Q
HOH
7
11
HOH
HOH
401
B
HOH
10
11
HOH
HOH
402
B
HOH
13
11
HOH
HOH
403
B
HOH
14
11
HOH
HOH
404
B
HOH
15
11
HOH
HOH
405
B
HOH
16
11
HOH
HOH
406
B
HOH
18
11
HOH
HOH
407
B
HOH
19
11
HOH
HOH
408
B
HOH
20
11
HOH
HOH
409
B
HOH
21
11
HOH
HOH
410
B
HOH
22
11
HOH
HOH
411
B
HOH
23
11
HOH
HOH
412
B
HOH
24
11
HOH
HOH
413
B
HOH
25
11
HOH
HOH
414
B
HOH
26
11
HOH
HOH
415
B
HOH
27
11
HOH
HOH
416
B
HOH
46
11
HOH
HOH
417
B
HOH
47
11
HOH
HOH
418
B
HOH
48
11
HOH
HOH
419
B
HOH
50
11
HOH
HOH
420
B
HOH
51
11
HOH
HOH
421
B
HOH
52
11
HOH
HOH
422
B
HOH
53
11
HOH
HOH
423
B
HOH
66
11
HOH
HOH
424
B
HOH
71
11
HOH
HOH
425
B
HOH
72
11
HOH
HOH
426
B
HOH
73
11
HOH
HOH
427
B
HOH
76
11
HOH
HOH
428
B
HOH
77
11
HOH
HOH
429
B
HOH
78
11
HOH
HOH
430
B
HOH
79
11
HOH
HOH
431
B
HOH
80
11
HOH
HOH
432
B
HOH
81
11
HOH
HOH
433
B
HOH
85
11
HOH
HOH
434
B
HOH
86
11
HOH
HOH
435
B
HOH
87
11
HOH
HOH
436
B
HOH
88
11
HOH
HOH
437
B
HOH
89
11
HOH
HOH
438
B
HOH
90
11
HOH
HOH
439
B
HOH
91
11
HOH
HOH
440
B
HOH
92
11
HOH
HOH
441
B
HOH
93
11
HOH
HOH
442
B
HOH
94
11
HOH
HOH
443
B
HOH
98
11
HOH
HOH
444
B
HOH
100
11
HOH
HOH
445
B
HOH
101
11
HOH
HOH
446
B
HOH
103
11
HOH
HOH
447
B
HOH
104
11
HOH
HOH
448
B
HOH
105
11
HOH
HOH
449
B
HOH
106
11
HOH
HOH
450
B
HOH
116
11
HOH
HOH
451
B
HOH
136
11
HOH
HOH
452
B
HOH
139
11
HOH
HOH
453
B
HOH
140
11
HOH
HOH
454
B
HOH
141
11
HOH
HOH
455
B
HOH
142
11
HOH
HOH
456
B
HOH
143
11
HOH
HOH
457
B
HOH
144
11
HOH
HOH
458
B
HOH
145
11
HOH
HOH
459
B
HOH
146
11
HOH
HOH
460
B
HOH
147
11
HOH
HOH
461
B
HOH
148
11
HOH
HOH
462
B
HOH
149
11
HOH
HOH
463
B
HOH
150
11
HOH
HOH
464
B
HOH
151
11
HOH
HOH
465
B
HOH
152
11
HOH
HOH
466
B
HOH
153
11
HOH
HOH
467
B
HOH
155
11
HOH
HOH
468
B
HOH
158
11
HOH
HOH
469
B
HOH
159
11
HOH
HOH
470
B
HOH
160
11
HOH
HOH
471
B
HOH
161
11
HOH
HOH
472
B
HOH
162
11
HOH
HOH
473
B
HOH
163
11
HOH
HOH
474
B
HOH
164
11
HOH
HOH
475
B
HOH
165
11
HOH
HOH
476
B
HOH
167
11
HOH
HOH
477
B
HOH
168
11
HOH
HOH
478
B
HOH
170
11
HOH
HOH
479
B
HOH
172
11
HOH
HOH
480
B
HOH
173
11
HOH
HOH
481
B
HOH
174
11
HOH
HOH
482
B
HOH
175
11
HOH
HOH
483
B
HOH
177
11
HOH
HOH
484
B
HOH
185
11
HOH
HOH
485
B
HOH
186
11
HOH
HOH
486
B
HOH
187
11
HOH
HOH
487
B
HOH
188
11
HOH
HOH
488
B
HOH
189
11
HOH
HOH
489
B
HOH
190
11
HOH
HOH
490
B
HOH
202
11
HOH
HOH
491
B
HOH
210
11
HOH
HOH
492
B
HOH
211
11
HOH
HOH
493
B
HOH
212
11
HOH
HOH
494
B
HOH
214
11
HOH
HOH
495
B
HOH
216
11
HOH
HOH
496
B
HOH
217
11
HOH
HOH
497
B
HOH
218
11
HOH
HOH
498
B
HOH
221
11
HOH
HOH
499
B
HOH
222
11
HOH
HOH
500
B
HOH
236
11
HOH
HOH
501
B
HOH
241
11
HOH
HOH
502
B
HOH
242
11
HOH
HOH
503
B
HOH
256
11
HOH
HOH
504
B
HOH
258
11
HOH
HOH
505
B
HOH
259
11
HOH
HOH
506
B
HOH
260
11
HOH
HOH
507
B
HOH
262
11
HOH
HOH
508
B
HOH
263
11
HOH
HOH
509
B
HOH
264
11
HOH
HOH
510
B
HOH
272
11
HOH
HOH
511
B
HOH
273
11
HOH
HOH
512
B
HOH
278
11
HOH
HOH
513
B
HOH
279
11
HOH
HOH
514
B
HOH
280
11
HOH
HOH
515
B
HOH
285
11
HOH
HOH
516
B
HOH
286
11
HOH
HOH
517
B
HOH
287
11
HOH
HOH
518
B
HOH
288
11
HOH
HOH
519
B
HOH
289
11
HOH
HOH
520
B
HOH
290
11
HOH
HOH
521
B
HOH
291
11
HOH
HOH
522
B
HOH
292
11
HOH
HOH
523
B
HOH
293
11
HOH
HOH
524
B
HOH
294
11
HOH
HOH
525
B
HOH
295
11
HOH
HOH
526
B
HOH
296
11
HOH
HOH
527
B
HOH
303
11
HOH
HOH
528
B
HOH
304
11
HOH
HOH
529
B
HOH
305
11
HOH
HOH
530
B
HOH
306
11
HOH
HOH
531
B
HOH
307
11
HOH
HOH
532
B
HOH
308
11
HOH
HOH
533
B
HOH
309
11
HOH
HOH
534
B
HOH
311
11
HOH
HOH
535
B
HOH
312
11
HOH
HOH
536
B
HOH
313
11
HOH
HOH
537
B
HOH
314
11
HOH
HOH
538
B
HOH
315
11
HOH
HOH
539
B
HOH
316
11
HOH
HOH
540
B
HOH
317
11
HOH
HOH
541
B
HOH
318
11
HOH
HOH
542
B
HOH
319
11
HOH
HOH
543
B
HOH
321
11
HOH
HOH
544
B
HOH
322
11
HOH
HOH
545
B
HOH
323
11
HOH
HOH
546
B
HOH
324
11
HOH
HOH
547
B
HOH
325
11
HOH
HOH
548
B
HOH
326
11
HOH
HOH
549
B
HOH
327
11
HOH
HOH
550
B
HOH
328
11
HOH
HOH
551
B
HOH
329
11
HOH
HOH
552
B
HOH
330
11
HOH
HOH
553
B
HOH
332
11
HOH
HOH
554
B
HOH
336
11
HOH
HOH
555
B
HOH
337
11
HOH
HOH
556
B
HOH
338
11
HOH
HOH
557
B
HOH
339
11
HOH
HOH
558
B
HOH
341
11
HOH
HOH
559
B
HOH
346
11
HOH
HOH
560
B
HOH
347
11
HOH
HOH
561
B
HOH
355
11
HOH
HOH
562
B
HOH
370
11
HOH
HOH
563
B
HOH
371
11
HOH
HOH
564
B
HOH
372
11
HOH
HOH
565
B
HOH
376
11
HOH
HOH
566
B
HOH
377
11
HOH
HOH
567
B
HOH
379
11
HOH
HOH
568
B
HOH
380
11
HOH
HOH
569
B
HOH
381
11
HOH
HOH
570
B
HOH
384
11
HOH
HOH
571
B
HOH
385
11
HOH
HOH
572
B
HOH
386
11
HOH
HOH
573
B
HOH
387
11
HOH
HOH
574
B
HOH
388
11
HOH
HOH
575
B
HOH
390
11
HOH
HOH
576
B
HOH
399
11
HOH
HOH
577
B
HOH
400
11
HOH
HOH
578
B
HOH
401
11
HOH
HOH
579
B
HOH
402
11
HOH
HOH
580
B
HOH
406
11
HOH
HOH
581
B
HOH
407
11
HOH
HOH
582
B
HOH
408
11
HOH
HOH
583
B
HOH
409
11
HOH
HOH
584
B
HOH
410
11
HOH
HOH
585
B
HOH
411
11
HOH
HOH
586
B
HOH
412
11
HOH
HOH
587
B
HOH
417
11
HOH
HOH
588
B
HOH
418
11
HOH
HOH
589
B
HOH
419
11
HOH
HOH
590
B
HOH
420
11
HOH
HOH
591
B
HOH
421
11
HOH
HOH
592
B
HOH
422
11
HOH
HOH
593
B
HOH
425
11
HOH
HOH
594
B
HOH
427
11
HOH
HOH
595
B
HOH
428
11
HOH
HOH
596
B
HOH
432
11
HOH
HOH
597
B
HOH
433
11
HOH
HOH
598
B
HOH
438
11
HOH
HOH
599
B
HOH
440
11
HOH
HOH
600
B
8MC
1
n
1
8MC
1
P
PRO
2
n
2
PRO
2
P
LEU
3
n
3
LEU
3
P
GLY
4
n
4
GLY
4
P
PHI
5
n
5
PHI
5
P
DNW
6
n
6
DNW
6
P
ALA
7
n
7
ALA
7
P
ARG
8
n
8
ARG
8
P
NH2
9
n
9
NH2
9
P
GLY
106
n
1
GLY
106
A
PHE
107
n
2
PHE
107
A
GLN
108
n
3
GLN
108
A
THR
109
n
4
THR
109
A
PHE
110
n
5
PHE
110
A
GLU
111
n
6
GLU
111
A
GLY
112
n
7
GLY
112
A
ASP
113
n
8
ASP
113
A
LEU
114
n
9
LEU
114
A
LYS
115
n
10
LYS
115
A
TRP
116
n
11
TRP
116
A
HIS
117
n
12
HIS
117
A
HIS
118
n
13
HIS
118
A
HIS
119
n
14
HIS
119
A
ASN
120
n
15
ASN
120
A
ILE
121
n
16
ILE
121
A
THR
122
n
17
THR
122
A
TYR
123
n
18
TYR
123
A
TRP
124
n
19
TRP
124
A
ILE
125
n
20
ILE
125
A
GLN
126
n
21
GLN
126
A
ASN
127
n
22
ASN
127
A
TYR
128
n
23
TYR
128
A
SER
129
n
24
SER
129
A
GLU
130
n
25
GLU
130
A
ASP
131
n
26
ASP
131
A
LEU
132
n
27
LEU
132
A
PRO
133
n
28
PRO
133
A
ARG
134
n
29
ARG
134
A
ALA
135
n
30
ALA
135
A
VAL
136
n
31
VAL
136
A
ILE
137
n
32
ILE
137
A
ASP
138
n
33
ASP
138
A
ASP
139
n
34
ASP
139
A
ALA
140
n
35
ALA
140
A
PHE
141
n
36
PHE
141
A
ALA
142
n
37
ALA
142
A
ARG
143
n
38
ARG
143
A
ALA
144
n
39
ALA
144
A
PHE
145
n
40
PHE
145
A
ALA
146
n
41
ALA
146
A
LEU
147
n
42
LEU
147
A
TRP
148
n
43
TRP
148
A
SER
149
n
44
SER
149
A
ALA
150
n
45
ALA
150
A
VAL
151
n
46
VAL
151
A
THR
152
n
47
THR
152
A
PRO
153
n
48
PRO
153
A
LEU
154
n
49
LEU
154
A
THR
155
n
50
THR
155
A
PHE
156
n
51
PHE
156
A
THR
157
n
52
THR
157
A
ARG
158
n
53
ARG
158
A
VAL
159
n
54
VAL
159
A
TYR
160
n
55
TYR
160
A
SER
161
n
56
SER
161
A
ARG
162
n
57
ARG
162
A
ASP
163
n
58
ASP
163
A
ALA
164
n
59
ALA
164
A
ASP
165
n
60
ASP
165
A
ILE
166
n
61
ILE
166
A
VAL
167
n
62
VAL
167
A
ILE
168
n
63
ILE
168
A
GLN
169
n
64
GLN
169
A
PHE
170
n
65
PHE
170
A
GLY
171
n
66
GLY
171
A
VAL
172
n
67
VAL
172
A
ALA
173
n
68
ALA
173
A
GLU
174
n
69
GLU
174
A
HIS
175
n
70
HIS
175
A
GLY
176
n
71
GLY
176
A
ASP
177
n
72
ASP
177
A
GLY
178
n
73
GLY
178
A
TYR
179
n
74
TYR
179
A
PRO
180
n
75
PRO
180
A
PHE
181
n
76
PHE
181
A
ASP
182
n
77
ASP
182
A
GLY
183
n
78
GLY
183
A
LYS
184
n
79
LYS
184
A
ASP
185
n
80
ASP
185
A
GLY
186
n
81
GLY
186
A
LEU
187
n
82
LEU
187
A
LEU
188
n
83
LEU
188
A
ALA
189
n
84
ALA
189
A
HIS
190
n
85
HIS
190
A
ALA
191
n
86
ALA
191
A
PHE
192
n
87
PHE
192
A
PRO
193
n
88
PRO
193
A
PRO
194
n
89
PRO
194
A
GLY
195
n
90
GLY
195
A
PRO
196
n
91
PRO
196
A
GLY
197
n
92
GLY
197
A
ILE
198
n
93
ILE
198
A
GLN
199
n
94
GLN
199
A
GLY
200
n
95
GLY
200
A
ASP
201
n
96
ASP
201
A
ALA
202
n
97
ALA
202
A
HIS
203
n
98
HIS
203
A
PHE
204
n
99
PHE
204
A
ASP
205
n
100
ASP
205
A
ASP
206
n
101
ASP
206
A
ASP
207
n
102
ASP
207
A
GLU
208
n
103
GLU
208
A
LEU
209
n
104
LEU
209
A
TRP
210
n
105
TRP
210
A
SER
211
n
106
SER
211
A
LEU
212
n
107
LEU
212
A
GLY
213
n
108
GLY
213
A
LYS
214
n
109
LYS
214
A
GLY
215
n
110
GLY
215
A
VAL
216
n
111
VAL
216
A
GLY
217
n
112
GLY
217
A
TYR
218
n
113
TYR
218
A
SER
219
n
114
SER
219
A
LEU
220
n
115
LEU
220
A
PHE
221
n
116
PHE
221
A
LEU
222
n
117
LEU
222
A
VAL
223
n
118
VAL
223
A
ALA
224
n
119
ALA
224
A
ALA
225
n
120
ALA
225
A
HIS
226
n
121
HIS
226
A
ALA
227
n
122
ALA
227
A
PHE
228
n
123
PHE
228
A
GLY
229
n
124
GLY
229
A
HIS
230
n
125
HIS
230
A
ALA
231
n
126
ALA
231
A
LEU
232
n
127
LEU
232
A
GLY
233
n
128
GLY
233
A
LEU
234
n
129
LEU
234
A
ASP
235
n
130
ASP
235
A
HIS
236
n
131
HIS
236
A
SER
237
n
132
SER
237
A
SER
238
n
133
SER
238
A
VAL
239
n
134
VAL
239
A
PRO
240
n
135
PRO
240
A
GLU
241
n
136
GLU
241
A
ALA
242
n
137
ALA
242
A
LEU
243
n
138
LEU
243
A
MET
244
n
139
MET
244
A
TYR
245
n
140
TYR
245
A
PRO
246
n
141
PRO
246
A
MET
247
n
142
MET
247
A
TYR
248
n
143
TYR
248
A
ARG
249
n
144
ARG
249
A
PHE
250
n
145
PHE
250
A
THR
251
n
146
THR
251
A
GLU
252
n
147
GLU
252
A
GLY
253
n
148
GLY
253
A
PRO
254
n
149
PRO
254
A
PRO
255
n
150
PRO
255
A
LEU
256
n
151
LEU
256
A
HIS
257
n
152
HIS
257
A
LYS
258
n
153
LYS
258
A
ASP
259
n
154
ASP
259
A
ASP
260
n
155
ASP
260
A
VAL
261
n
156
VAL
261
A
ASN
262
n
157
ASN
262
A
GLY
263
n
158
GLY
263
A
ILE
264
n
159
ILE
264
A
ARG
265
n
160
ARG
265
A
HIS
266
n
161
HIS
266
A
LEU
267
n
162
LEU
267
A
TYR
268
n
163
TYR
268
A
GLY
269
n
164
GLY
269
A
8MC
1
n
1
8MC
1
Q
PRO
2
n
2
PRO
2
Q
LEU
3
n
3
LEU
3
Q
GLY
4
n
4
GLY
4
Q
PHI
5
n
5
PHI
5
Q
DNW
6
n
6
DNW
6
Q
ALA
7
n
7
ALA
7
Q
ARG
8
n
8
ARG
8
Q
NH2
9
n
9
NH2
9
Q
GLY
106
n
1
GLY
106
B
PHE
107
n
2
PHE
107
B
GLN
108
n
3
GLN
108
B
THR
109
n
4
THR
109
B
PHE
110
n
5
PHE
110
B
GLU
111
n
6
GLU
111
B
GLY
112
n
7
GLY
112
B
ASP
113
n
8
ASP
113
B
LEU
114
n
9
LEU
114
B
LYS
115
n
10
LYS
115
B
TRP
116
n
11
TRP
116
B
HIS
117
n
12
HIS
117
B
HIS
118
n
13
HIS
118
B
HIS
119
n
14
HIS
119
B
ASN
120
n
15
ASN
120
B
ILE
121
n
16
ILE
121
B
THR
122
n
17
THR
122
B
TYR
123
n
18
TYR
123
B
TRP
124
n
19
TRP
124
B
ILE
125
n
20
ILE
125
B
GLN
126
n
21
GLN
126
B
ASN
127
n
22
ASN
127
B
TYR
128
n
23
TYR
128
B
SER
129
n
24
SER
129
B
GLU
130
n
25
GLU
130
B
ASP
131
n
26
ASP
131
B
LEU
132
n
27
LEU
132
B
PRO
133
n
28
PRO
133
B
ARG
134
n
29
ARG
134
B
ALA
135
n
30
ALA
135
B
VAL
136
n
31
VAL
136
B
ILE
137
n
32
ILE
137
B
ASP
138
n
33
ASP
138
B
ASP
139
n
34
ASP
139
B
ALA
140
n
35
ALA
140
B
PHE
141
n
36
PHE
141
B
ALA
142
n
37
ALA
142
B
ARG
143
n
38
ARG
143
B
ALA
144
n
39
ALA
144
B
PHE
145
n
40
PHE
145
B
ALA
146
n
41
ALA
146
B
LEU
147
n
42
LEU
147
B
TRP
148
n
43
TRP
148
B
SER
149
n
44
SER
149
B
ALA
150
n
45
ALA
150
B
VAL
151
n
46
VAL
151
B
THR
152
n
47
THR
152
B
PRO
153
n
48
PRO
153
B
LEU
154
n
49
LEU
154
B
THR
155
n
50
THR
155
B
PHE
156
n
51
PHE
156
B
THR
157
n
52
THR
157
B
ARG
158
n
53
ARG
158
B
VAL
159
n
54
VAL
159
B
TYR
160
n
55
TYR
160
B
SER
161
n
56
SER
161
B
ARG
162
n
57
ARG
162
B
ASP
163
n
58
ASP
163
B
ALA
164
n
59
ALA
164
B
ASP
165
n
60
ASP
165
B
ILE
166
n
61
ILE
166
B
VAL
167
n
62
VAL
167
B
ILE
168
n
63
ILE
168
B
GLN
169
n
64
GLN
169
B
PHE
170
n
65
PHE
170
B
GLY
171
n
66
GLY
171
B
VAL
172
n
67
VAL
172
B
ALA
173
n
68
ALA
173
B
GLU
174
n
69
GLU
174
B
HIS
175
n
70
HIS
175
B
GLY
176
n
71
GLY
176
B
ASP
177
n
72
ASP
177
B
GLY
178
n
73
GLY
178
B
TYR
179
n
74
TYR
179
B
PRO
180
n
75
PRO
180
B
PHE
181
n
76
PHE
181
B
ASP
182
n
77
ASP
182
B
GLY
183
n
78
GLY
183
B
LYS
184
n
79
LYS
184
B
ASP
185
n
80
ASP
185
B
GLY
186
n
81
GLY
186
B
LEU
187
n
82
LEU
187
B
LEU
188
n
83
LEU
188
B
ALA
189
n
84
ALA
189
B
HIS
190
n
85
HIS
190
B
ALA
191
n
86
ALA
191
B
PHE
192
n
87
PHE
192
B
PRO
193
n
88
PRO
193
B
PRO
194
n
89
PRO
194
B
GLY
195
n
90
GLY
195
B
PRO
196
n
91
PRO
196
B
GLY
197
n
92
GLY
197
B
ILE
198
n
93
ILE
198
B
GLN
199
n
94
GLN
199
B
GLY
200
n
95
GLY
200
B
ASP
201
n
96
ASP
201
B
ALA
202
n
97
ALA
202
B
HIS
203
n
98
HIS
203
B
PHE
204
n
99
PHE
204
B
ASP
205
n
100
ASP
205
B
ASP
206
n
101
ASP
206
B
ASP
207
n
102
ASP
207
B
GLU
208
n
103
GLU
208
B
LEU
209
n
104
LEU
209
B
TRP
210
n
105
TRP
210
B
SER
211
n
106
SER
211
B
LEU
212
n
107
LEU
212
B
GLY
213
n
108
GLY
213
B
LYS
214
n
109
LYS
214
B
GLY
215
n
110
GLY
215
B
VAL
216
n
111
VAL
216
B
GLY
217
n
112
GLY
217
B
TYR
218
n
113
TYR
218
B
SER
219
n
114
SER
219
B
LEU
220
n
115
LEU
220
B
PHE
221
n
116
PHE
221
B
LEU
222
n
117
LEU
222
B
VAL
223
n
118
VAL
223
B
ALA
224
n
119
ALA
224
B
ALA
225
n
120
ALA
225
B
HIS
226
n
121
HIS
226
B
ALA
227
n
122
ALA
227
B
PHE
228
n
123
PHE
228
B
GLY
229
n
124
GLY
229
B
HIS
230
n
125
HIS
230
B
ALA
231
n
126
ALA
231
B
LEU
232
n
127
LEU
232
B
GLY
233
n
128
GLY
233
B
LEU
234
n
129
LEU
234
B
ASP
235
n
130
ASP
235
B
HIS
236
n
131
HIS
236
B
SER
237
n
132
SER
237
B
SER
238
n
133
SER
238
B
VAL
239
n
134
VAL
239
B
PRO
240
n
135
PRO
240
B
GLU
241
n
136
GLU
241
B
ALA
242
n
137
ALA
242
B
LEU
243
n
138
LEU
243
B
MET
244
n
139
MET
244
B
TYR
245
n
140
TYR
245
B
PRO
246
n
141
PRO
246
B
MET
247
n
142
MET
247
B
TYR
248
n
143
TYR
248
B
ARG
249
n
144
ARG
249
B
PHE
250
n
145
PHE
250
B
THR
251
n
146
THR
251
B
GLU
252
n
147
GLU
252
B
GLY
253
n
148
GLY
253
B
PRO
254
n
149
PRO
254
B
PRO
255
n
150
PRO
255
B
LEU
256
n
151
LEU
256
B
HIS
257
n
152
HIS
257
B
LYS
258
n
153
LYS
258
B
ASP
259
n
154
ASP
259
B
ASP
260
n
155
ASP
260
B
VAL
261
n
156
VAL
261
B
ASN
262
n
157
ASN
262
B
GLY
263
n
158
GLY
263
B
ILE
264
n
159
ILE
264
B
ARG
265
n
160
ARG
265
B
HIS
266
n
161
HIS
266
B
LEU
267
n
162
LEU
267
B
TYR
268
n
163
TYR
268
B
GLY
269
n
164
GLY
269
B
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
3270
-124
8700
3270
-124
8670
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
131
B
OD1
ASP
26
1_555
45.6
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
206
B
O
ASP
101
1_555
141.9
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
206
B
O
ASP
101
1_555
152.3
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
206
B
OD1
ASP
101
1_555
90.3
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
206
B
OD1
ASP
101
1_555
94.7
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
ASP
206
B
OD1
ASP
101
1_555
63.0
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
GLU
208
B
O
GLU
103
1_555
73.3
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
GLU
208
B
O
GLU
103
1_555
116.4
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
GLU
208
B
O
GLU
103
1_555
85.8
A
ASP
206
B
OD1
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
GLU
208
B
O
GLU
103
1_555
102.4
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
73.8
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
63.4
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
138.0
A
ASP
206
B
OD1
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
158.0
A
GLU
208
B
O
GLU
103
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
87.8
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
132.4
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
119.1
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
75.9
A
ASP
206
B
OD1
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
136.7
A
GLU
208
B
O
GLU
103
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
86.9
A
PGO
307
K
O1
PGO
1_555
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
62.3
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
120.4
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
75.6
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
85.8
A
ASP
206
B
OD1
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
85.0
A
GLU
208
B
O
GLU
103
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
164.9
A
PGO
307
K
O1
PGO
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
90.0
A
PGO
307
K
O2
PGO
1_555
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
78.9
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
GLY
197
B
O
GLY
92
1_555
166.3
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
GLN
199
B
O
GLN
94
1_555
89.5
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
A
GLN
199
B
O
GLN
94
1_555
78.0
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
ASP
201
B
OD1
ASP
96
1_555
83.4
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
A
ASP
201
B
OD1
ASP
96
1_555
101.3
A
GLN
199
B
O
GLN
94
1_555
A
SR
305
I
SR
SR
1_555
A
ASP
201
B
OD1
ASP
96
1_555
86.6
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
418
AA
O
HOH
1_555
123.7
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
418
AA
O
HOH
1_555
69.8
A
GLN
199
B
O
GLN
94
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
418
AA
O
HOH
1_555
133.5
A
ASP
201
B
OD1
ASP
96
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
418
AA
O
HOH
1_555
68.6
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
84.3
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
86.9
A
GLN
199
B
O
GLN
94
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
75.1
A
ASP
201
B
OD1
ASP
96
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
158.0
A
HOH
418
AA
O
HOH
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
133.3
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
102.8
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
84.4
A
GLN
199
B
O
GLN
94
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
143.1
A
ASP
201
B
OD1
ASP
96
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
128.9
A
HOH
418
AA
O
HOH
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
66.2
A
HOH
455
AA
O
HOH
1_555
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
71.8
A
HIS
175
B
NE2
HIS
70
1_555
A
ZN
303
G
ZN
ZN
1_555
A
ASP
177
B
OD1
ASP
72
1_555
112.8
A
HIS
175
B
NE2
HIS
70
1_555
A
ZN
303
G
ZN
ZN
1_555
A
HIS
190
B
NE2
HIS
85
1_555
112.3
A
ASP
177
B
OD1
ASP
72
1_555
A
ZN
303
G
ZN
ZN
1_555
A
HIS
190
B
NE2
HIS
85
1_555
111.5
A
HIS
175
B
NE2
HIS
70
1_555
A
ZN
303
G
ZN
ZN
1_555
A
HIS
203
B
ND1
HIS
98
1_555
111.3
A
ASP
177
B
OD1
ASP
72
1_555
A
ZN
303
G
ZN
ZN
1_555
A
HIS
203
B
ND1
HIS
98
1_555
94.2
A
HIS
190
B
NE2
HIS
85
1_555
A
ZN
303
G
ZN
ZN
1_555
A
HIS
203
B
ND1
HIS
98
1_555
113.6
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
A
GLY
183
B
O
GLY
78
1_555
88.5
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
185
B
O
ASP
80
1_555
89.9
A
GLY
183
B
O
GLY
78
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
185
B
O
ASP
80
1_555
88.3
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
A
LEU
187
B
O
LEU
82
1_555
89.4
A
GLY
183
B
O
GLY
78
1_555
A
CA
304
H
CA
CA
1_555
A
LEU
187
B
O
LEU
82
1_555
177.0
A
ASP
185
B
O
ASP
80
1_555
A
CA
304
H
CA
CA
1_555
A
LEU
187
B
O
LEU
82
1_555
93.9
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
205
B
OD2
ASP
100
1_555
90.5
A
GLY
183
B
O
GLY
78
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
205
B
OD2
ASP
100
1_555
87.6
A
ASP
185
B
O
ASP
80
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
205
B
OD2
ASP
100
1_555
175.8
A
LEU
187
B
O
LEU
82
1_555
A
CA
304
H
CA
CA
1_555
A
ASP
205
B
OD2
ASP
100
1_555
90.3
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
A
GLU
208
B
OE2
GLU
103
1_555
175.7
A
GLY
183
B
O
GLY
78
1_555
A
CA
304
H
CA
CA
1_555
A
GLU
208
B
OE2
GLU
103
1_555
91.0
A
ASP
185
B
O
ASP
80
1_555
A
CA
304
H
CA
CA
1_555
A
GLU
208
B
OE2
GLU
103
1_555
85.8
A
LEU
187
B
O
LEU
82
1_555
A
CA
304
H
CA
CA
1_555
A
GLU
208
B
OE2
GLU
103
1_555
91.2
A
ASP
205
B
OD2
ASP
100
1_555
A
CA
304
H
CA
CA
1_555
A
GLU
208
B
OE2
GLU
103
1_555
93.8
A
HIS
226
B
NE2
HIS
121
1_555
A
ZN
302
F
ZN
ZN
1_555
A
HIS
230
B
NE2
HIS
125
1_555
102.5
A
HIS
226
B
NE2
HIS
121
1_555
A
ZN
302
F
ZN
ZN
1_555
A
HIS
236
B
NE2
HIS
131
1_555
112.2
A
HIS
230
B
NE2
HIS
125
1_555
A
ZN
302
F
ZN
ZN
1_555
A
HIS
236
B
NE2
HIS
131
1_555
103.9
A
HIS
226
B
NE2
HIS
121
1_555
A
ZN
302
F
ZN
ZN
1_555
A
AZI
301
E
N3
AZI
1_555
99.4
A
HIS
230
B
NE2
HIS
125
1_555
A
ZN
302
F
ZN
ZN
1_555
A
AZI
301
E
N3
AZI
1_555
94.6
A
HIS
236
B
NE2
HIS
131
1_555
A
ZN
302
F
ZN
ZN
1_555
A
AZI
301
E
N3
AZI
1_555
138.4
Q
AZI
101
P
N1
AZI
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
226
D
NE2
HIS
121
1_555
103.7
Q
AZI
101
P
N1
AZI
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
230
D
NE2
HIS
125
1_555
96.9
B
HIS
226
D
NE2
HIS
121
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
230
D
NE2
HIS
125
1_555
102.7
Q
AZI
101
P
N1
AZI
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
236
D
NE2
HIS
131
1_555
135.2
B
HIS
226
D
NE2
HIS
121
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
236
D
NE2
HIS
131
1_555
109.6
B
HIS
230
D
NE2
HIS
125
1_555
B
ZN
301
Q
ZN
ZN
1_555
B
HIS
236
D
NE2
HIS
131
1_555
103.8
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
131
D
OD1
ASP
26
1_555
49.2
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
206
D
O
ASP
101
1_555
144.3
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
206
D
O
ASP
101
1_555
146.4
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
206
D
OD1
ASP
101
1_555
89.3
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
206
D
OD1
ASP
101
1_555
86.4
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
ASP
206
D
OD1
ASP
101
1_555
67.3
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
GLU
208
D
O
GLU
103
1_555
74.1
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
GLU
208
D
O
GLU
103
1_555
122.4
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
GLU
208
D
O
GLU
103
1_555
85.7
B
ASP
206
D
OD1
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
GLU
208
D
O
GLU
103
1_555
104.6
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
78.9
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
71.4
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
131.4
B
ASP
206
D
OD1
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
157.6
B
GLU
208
D
O
GLU
103
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
90.5
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
132.8
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
127.0
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
70.4
B
ASP
206
D
OD1
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
136.5
B
GLU
208
D
O
GLU
103
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
81.8
B
PGO
306
V
O1
PGO
1_555
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
61.1
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
120.2
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
71.0
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
85.8
B
ASP
206
D
OD1
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
85.4
B
GLU
208
D
O
GLU
103
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
163.2
B
PGO
306
V
O1
PGO
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
84.3
B
PGO
306
V
O2
PGO
1_555
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
81.7
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
B
GLY
197
D
O
GLY
92
1_555
162.3
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
B
GLN
199
D
O
GLN
94
1_555
83.5
B
GLY
197
D
O
GLY
92
1_555
B
SR
304
T
SR
SR
1_555
B
GLN
199
D
O
GLN
94
1_555
78.8
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
B
ASP
201
D
OD1
ASP
96
1_555
85.6
B
GLY
197
D
O
GLY
92
1_555
B
SR
304
T
SR
SR
1_555
B
ASP
201
D
OD1
ASP
96
1_555
94.1
B
GLN
199
D
O
GLN
94
1_555
B
SR
304
T
SR
SR
1_555
B
ASP
201
D
OD1
ASP
96
1_555
89.0
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
451
CA
O
HOH
1_555
86.0
B
GLY
197
D
O
GLY
92
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
451
CA
O
HOH
1_555
90.1
B
GLN
199
D
O
GLN
94
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
451
CA
O
HOH
1_555
77.7
B
ASP
201
D
OD1
ASP
96
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
451
CA
O
HOH
1_555
165.0
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
126.4
B
GLY
197
D
O
GLY
92
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
71.2
B
GLN
199
D
O
GLN
94
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
149.7
B
ASP
201
D
OD1
ASP
96
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
97.1
B
HOH
451
CA
O
HOH
1_555
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
97.9
B
HIS
175
D
NE2
HIS
70
1_555
B
ZN
302
R
ZN
ZN
1_555
B
ASP
177
D
OD1
ASP
72
1_555
114.5
B
HIS
175
D
NE2
HIS
70
1_555
B
ZN
302
R
ZN
ZN
1_555
B
HIS
190
D
NE2
HIS
85
1_555
112.4
B
ASP
177
D
OD1
ASP
72
1_555
B
ZN
302
R
ZN
ZN
1_555
B
HIS
190
D
NE2
HIS
85
1_555
112.1
B
HIS
175
D
NE2
HIS
70
1_555
B
ZN
302
R
ZN
ZN
1_555
B
HIS
203
D
ND1
HIS
98
1_555
109.0
B
ASP
177
D
OD1
ASP
72
1_555
B
ZN
302
R
ZN
ZN
1_555
B
HIS
203
D
ND1
HIS
98
1_555
94.9
B
HIS
190
D
NE2
HIS
85
1_555
B
ZN
302
R
ZN
ZN
1_555
B
HIS
203
D
ND1
HIS
98
1_555
112.8
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
B
GLY
183
D
O
GLY
78
1_555
85.7
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
185
D
O
ASP
80
1_555
87.2
B
GLY
183
D
O
GLY
78
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
185
D
O
ASP
80
1_555
86.5
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
B
LEU
187
D
O
LEU
82
1_555
89.3
B
GLY
183
D
O
GLY
78
1_555
B
CA
303
S
CA
CA
1_555
B
LEU
187
D
O
LEU
82
1_555
174.8
B
ASP
185
D
O
ASP
80
1_555
B
CA
303
S
CA
CA
1_555
B
LEU
187
D
O
LEU
82
1_555
94.6
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
205
D
OD2
ASP
100
1_555
94.2
B
GLY
183
D
O
GLY
78
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
205
D
OD2
ASP
100
1_555
89.0
B
ASP
185
D
O
ASP
80
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
205
D
OD2
ASP
100
1_555
175.2
B
LEU
187
D
O
LEU
82
1_555
B
CA
303
S
CA
CA
1_555
B
ASP
205
D
OD2
ASP
100
1_555
90.0
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
B
GLU
208
D
OE2
GLU
103
1_555
174.4
B
GLY
183
D
O
GLY
78
1_555
B
CA
303
S
CA
CA
1_555
B
GLU
208
D
OE2
GLU
103
1_555
93.9
B
ASP
185
D
O
ASP
80
1_555
B
CA
303
S
CA
CA
1_555
B
GLU
208
D
OE2
GLU
103
1_555
87.2
B
LEU
187
D
O
LEU
82
1_555
B
CA
303
S
CA
CA
1_555
B
GLU
208
D
OE2
GLU
103
1_555
91.3
B
ASP
205
D
OD2
ASP
100
1_555
B
CA
303
S
CA
CA
1_555
B
GLU
208
D
OE2
GLU
103
1_555
91.4
P
PHI
5
IODO-PHENYLALANINE
A
PHI
5
PHE
P
DNW
6
3-[(2,4-DINITROPHENYL)AMINO]-L-ALANINE
A
DNW
6
ALA
Q
PHI
5
IODO-PHENYLALANINE
C
PHI
5
PHE
Q
DNW
6
3-[(2,4-DINITROPHENYL)AMINO]-L-ALANINE
C
DNW
6
ALA
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
P
N
PHI
5
A
N
PHI
5
A
O
LEU
188
B
O
LEU
83
A
N
HIS
190
B
N
HIS
85
A
O
HIS
203
B
O
HIS
98
A
O
PHE
204
B
O
PHE
99
A
N
GLN
169
B
N
GLN
64
A
O
ILE
168
B
O
ILE
63
A
N
TRP
124
B
N
TRP
19
A
N
ILE
121
B
N
ILE
16
A
O
THR
157
B
O
THR
52
A
N
SER
211
B
N
SER
106
A
O
TYR
218
B
O
TYR
113
Q
N
PHI
5
C
N
PHI
5
B
O
LEU
188
D
O
LEU
83
B
N
HIS
190
D
N
HIS
85
B
O
HIS
203
D
O
HIS
98
B
O
PHE
204
D
O
PHE
99
B
N
GLN
169
D
N
GLN
64
B
O
ILE
168
D
O
ILE
63
B
N
TRP
124
D
N
TRP
19
B
N
ILE
121
D
N
ILE
16
B
O
THR
155
D
O
THR
50
B
N
SER
211
D
N
SER
106
B
O
TYR
218
D
O
TYR
113
1
A
ALA
173
46.72
-133.63
1
A
ALA
173
46.72
-133.12
1
A
ASP
185
62.29
-159.85
1
A
LYS
214
81.47
-15.98
1
B
ALA
173
49.61
-132.60
1
B
ASP
185
62.34
-159.02
1
B
LEU
212
-143.11
-17.54
18.68
0.1954
0.1597
0.1602
0.1615
1.698
40.568
1922
38427
38419
5.00
99.75
0.14
RANDOM
1
Isotropic
THROUGHOUT
2.01
-3
MOLECULAR REPLACEMENT
16.18
0.90
1.11
4H3X
ML
FLAT BULK SOLVENT MODEL
1.698
40.568
410
3235
61
0
2764
0.006
3047
1.084
4155
16.904
1043
0.080
399
0.006
554
0.2793
0.2362
1.7402
130
2474
2604
97.00
0.2380
0.2031
1.7872
137
2585
2722
100.00
0.2247
0.1877
1.8398
133
2545
2678
100.00
0.2039
0.1719
1.8992
138
2614
2752
100.00
0.1966
0.1579
1.9671
134
2544
2678
100.00
0.2036
0.1564
2.0458
136
2575
2711
100.00
0.1806
0.1436
2.1389
138
2628
2766
100.00
0.1606
0.1478
2.2517
135
2561
2696
100.00
0.1881
0.1518
2.3927
137
2609
2746
100.00
0.1886
0.1567
2.5775
136
2587
2723
100.00
0.2250
0.1620
2.8368
139
2635
2774
100.00
0.2347
0.1641
3.2471
139
2636
2775
100.00
0.1648
0.1385
4.0904
141
2679
2820
100.00
0.1802
0.1618
40.5794
149
2825
2974
100.00
23.385
1.698
50.0
4JIJ
38532
38427
0
-3
0.174
0.168
1
9.91
8.97
99.7
1.052
1.7
1.8
2.06
6144
1.083
1
8.92
98.5
.681
1.8
1.92
3.39
5748
.686
1
9.14
100.0
.429
1.92
2.08
5.30
5362
.446
1
9.09
100.0
.285
2.08
2.28
7.89
4991
.294
1
9.38
100.0
.226
2.28
2.54
9.75
4489
.223
1
8.97
100.0
.165
2.54
2.94
13.22
4019
.154
1
9.25
100.0
.105
2.94
3.59
19.44
3440
.092
1
8.67
100.0
.074
3.59
5.07
27.42
2712
.064
1
8.3
99.8
.073
5.07
50.0
26.60
1621
.063
1
7.83
99.7
data collection
DNA
phasing
MOLREP
refinement
PHENIX
(phenix.refine: 1.8_1069)
data reduction
XDS
data scaling
XDS
Crystal structure of an inactive mutant of MMP-9 catalytic domain in complex with a fluorogenic synthetic peptidic substrate
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
8
N
N
8
N
N
9
N
N
10
N
N
3
N
N
4
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
8
N
N
8
N
N
10
N
N
11
N
N
11
N
N
11
N
N
11
N
N
A
PRO
133
B
PRO
28
HELX_P
A
ALA
150
B
ALA
45
1
1
18
A
LEU
220
B
LEU
115
HELX_P
A
LEU
232
B
LEU
127
1
2
13
A
HIS
257
B
HIS
152
HELX_P
A
GLY
269
B
GLY
164
1
3
13
B
PRO
133
D
PRO
28
HELX_P
B
VAL
151
D
VAL
46
1
4
19
B
LEU
220
D
LEU
115
HELX_P
B
LEU
232
D
LEU
127
1
5
13
B
HIS
257
D
HIS
152
HELX_P
B
GLY
269
D
GLY
164
1
6
13
covale
1.343
both
P
8MC
1
A
C
8MC
1
1_555
P
PRO
2
A
N
PRO
2
1_555
covale
1.332
both
P
GLY
4
A
C
GLY
4
1_555
P
PHI
5
A
N
PHI
5
1_555
covale
1.331
both
P
PHI
5
A
C
PHI
5
1_555
P
DNW
6
A
N
DNW
6
1_555
covale
1.329
both
P
DNW
6
A
C
DNW
6
1_555
P
ALA
7
A
N
ALA
7
1_555
covale
1.330
both
P
ARG
8
A
C
ARG
8
1_555
P
NH2
9
A
N
NH2
9
1_555
covale
1.344
both
Q
8MC
1
C
C
8MC
1
1_555
Q
PRO
2
C
N
PRO
2
1_555
covale
1.332
both
Q
GLY
4
C
C
GLY
4
1_555
Q
PHI
5
C
N
PHI
5
1_555
covale
1.329
both
Q
PHI
5
C
C
PHI
5
1_555
Q
DNW
6
C
N
DNW
6
1_555
covale
1.328
both
Q
DNW
6
C
C
DNW
6
1_555
Q
ALA
7
C
N
ALA
7
1_555
covale
1.329
both
Q
ARG
8
C
C
ARG
8
1_555
Q
NH2
9
C
N
NH2
9
1_555
metalc
2.561
A
ASP
131
B
OD2
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
metalc
2.981
A
ASP
131
B
OD1
ASP
26
1_555
A
SR
306
J
SR
SR
1_555
metalc
2.454
A
ASP
165
B
O
ASP
60
1_555
A
SR
305
I
SR
SR
1_555
metalc
2.021
A
HIS
175
B
NE2
HIS
70
1_555
A
ZN
303
G
ZN
ZN
1_555
metalc
1.910
A
ASP
177
B
OD1
ASP
72
1_555
A
ZN
303
G
ZN
ZN
1_555
metalc
2.374
A
ASP
182
B
OD1
ASP
77
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.230
A
GLY
183
B
O
GLY
78
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.274
A
ASP
185
B
O
ASP
80
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.299
A
LEU
187
B
O
LEU
82
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.031
A
HIS
190
B
NE2
HIS
85
1_555
A
ZN
303
G
ZN
ZN
1_555
metalc
2.456
A
GLY
197
B
O
GLY
92
1_555
A
SR
305
I
SR
SR
1_555
metalc
2.544
A
GLN
199
B
O
GLN
94
1_555
A
SR
305
I
SR
SR
1_555
metalc
2.591
A
ASP
201
B
OD1
ASP
96
1_555
A
SR
305
I
SR
SR
1_555
metalc
2.006
A
HIS
203
B
ND1
HIS
98
1_555
A
ZN
303
G
ZN
ZN
1_555
metalc
2.293
A
ASP
205
B
OD2
ASP
100
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.500
A
ASP
206
B
O
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
metalc
2.703
A
ASP
206
B
OD1
ASP
101
1_555
A
SR
306
J
SR
SR
1_555
metalc
2.242
A
GLU
208
B
OE2
GLU
103
1_555
A
CA
304
H
CA
CA
1_555
metalc
2.427
A
GLU
208
B
O
GLU
103
1_555
A
SR
306
J
SR
SR
1_555
metalc
2.008
A
HIS
226
B
NE2
HIS
121
1_555
A
ZN
302
F
ZN
ZN
1_555
metalc
2.011
A
HIS
230
B
NE2
HIS
125
1_555
A
ZN
302
F
ZN
ZN
1_555
metalc
1.983
A
HIS
236
B
NE2
HIS
131
1_555
A
ZN
302
F
ZN
ZN
1_555
metalc
1.981
A
AZI
301
E
N3
AZI
1_555
A
ZN
302
F
ZN
ZN
1_555
metalc
2.714
A
SR
305
I
SR
SR
1_555
A
HOH
418
AA
O
HOH
1_555
metalc
2.496
A
SR
305
I
SR
SR
1_555
A
HOH
455
AA
O
HOH
1_555
metalc
2.530
A
SR
305
I
SR
SR
1_555
A
HOH
565
AA
O
HOH
1_555
metalc
2.467
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O1
PGO
1_555
metalc
2.557
A
SR
306
J
SR
SR
1_555
A
PGO
307
K
O2
PGO
1_555
metalc
2.616
A
SR
306
J
SR
SR
1_555
A
HOH
434
AA
O
HOH
1_555
metalc
2.019
Q
AZI
101
P
N1
AZI
1_555
B
ZN
301
Q
ZN
ZN
1_555
metalc
2.550
B
ASP
131
D
OD2
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
metalc
2.707
B
ASP
131
D
OD1
ASP
26
1_555
B
SR
305
U
SR
SR
1_555
metalc
2.454
B
ASP
165
D
O
ASP
60
1_555
B
SR
304
T
SR
SR
1_555
metalc
2.055
B
HIS
175
D
NE2
HIS
70
1_555
B
ZN
302
R
ZN
ZN
1_555
metalc
1.958
B
ASP
177
D
OD1
ASP
72
1_555
B
ZN
302
R
ZN
ZN
1_555
metalc
2.437
B
ASP
182
D
OD1
ASP
77
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.257
B
GLY
183
D
O
GLY
78
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.315
B
ASP
185
D
O
ASP
80
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.266
B
LEU
187
D
O
LEU
82
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.053
B
HIS
190
D
NE2
HIS
85
1_555
B
ZN
302
R
ZN
ZN
1_555
metalc
2.423
B
GLY
197
D
O
GLY
92
1_555
B
SR
304
T
SR
SR
1_555
metalc
2.563
B
GLN
199
D
O
GLN
94
1_555
B
SR
304
T
SR
SR
1_555
metalc
2.514
B
ASP
201
D
OD1
ASP
96
1_555
B
SR
304
T
SR
SR
1_555
metalc
2.037
B
HIS
203
D
ND1
HIS
98
1_555
B
ZN
302
R
ZN
ZN
1_555
metalc
2.269
B
ASP
205
D
OD2
ASP
100
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.487
B
ASP
206
D
O
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
metalc
2.574
B
ASP
206
D
OD1
ASP
101
1_555
B
SR
305
U
SR
SR
1_555
metalc
2.143
B
GLU
208
D
OE2
GLU
103
1_555
B
CA
303
S
CA
CA
1_555
metalc
2.482
B
GLU
208
D
O
GLU
103
1_555
B
SR
305
U
SR
SR
1_555
metalc
2.047
B
HIS
226
D
NE2
HIS
121
1_555
B
ZN
301
Q
ZN
ZN
1_555
metalc
2.020
B
HIS
230
D
NE2
HIS
125
1_555
B
ZN
301
Q
ZN
ZN
1_555
metalc
2.001
B
HIS
236
D
NE2
HIS
131
1_555
B
ZN
301
Q
ZN
ZN
1_555
metalc
2.480
B
SR
304
T
SR
SR
1_555
B
HOH
451
CA
O
HOH
1_555
metalc
2.503
B
SR
304
T
SR
SR
1_555
B
HOH
455
CA
O
HOH
1_555
metalc
2.561
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O1
PGO
1_555
metalc
2.612
B
SR
305
U
SR
SR
1_555
B
PGO
306
V
O2
PGO
1_555
metalc
2.550
B
SR
305
U
SR
SR
1_555
B
HOH
422
CA
O
HOH
1_555
HYDROLASE/substrate
HYDROLASE substrate complex, Zincin-like, Gelatinase, Collagenase, Catalytic Domain, HYDROLASE-substrate complex
MMP9_HUMAN
UNP
2
107
P14780
FQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDG
LLAHAFPPGPGIQGDAHFDDDELWSLGKGV
MMP9_HUMAN
UNP
2
392
P14780
GYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLYG
4JIJ
PDB
1
4JIJ
107
216
4JIJ
107
216
P14780
A
1
2
111
392
444
4JIJ
217
269
P14780
A
2
112
164
107
216
4JIJ
107
216
P14780
B
1
2
111
392
444
4JIJ
217
269
P14780
B
2
112
164
1
9
4JIJ
1
9
4JIJ
P
3
1
9
1
9
4JIJ
1
9
4JIJ
Q
3
1
9
2
GLU
engineered mutation
ALA
227
4JIJ
A
P14780
UNP
402
122
4
GLU
engineered mutation
ALA
227
4JIJ
B
P14780
UNP
402
122
6
2
6
2
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
P
LEU
3
A
LEU
3
P
DNW
6
A
DNW
6
A
LEU
187
B
LEU
82
A
ALA
191
B
ALA
86
A
ALA
202
B
ALA
97
A
ASP
205
B
ASP
100
A
ILE
166
B
ILE
61
A
GLY
171
B
GLY
66
A
ASN
120
B
ASN
15
A
ILE
125
B
ILE
20
A
THR
155
B
THR
50
A
ARG
158
B
ARG
53
A
TRP
210
B
TRP
105
A
SER
211
B
SER
106
A
TYR
218
B
TYR
113
A
SER
219
B
SER
114
Q
LEU
3
C
LEU
3
Q
DNW
6
C
DNW
6
B
LEU
187
D
LEU
82
B
ALA
191
D
ALA
86
B
ALA
202
D
ALA
97
B
ASP
205
D
ASP
100
B
ILE
166
D
ILE
61
B
GLY
171
D
GLY
66
B
ASN
120
D
ASN
15
B
ILE
125
D
ILE
20
B
THR
155
D
THR
50
B
ARG
158
D
ARG
53
B
TRP
210
D
TRP
105
B
SER
211
D
SER
106
B
TYR
218
D
TYR
113
B
SER
219
D
SER
114
BINDING SITE FOR RESIDUE AZI A 301
A
AZI
301
Software
9
BINDING SITE FOR RESIDUE ZN A 302
A
ZN
302
Software
5
BINDING SITE FOR RESIDUE ZN A 303
A
ZN
303
Software
4
BINDING SITE FOR RESIDUE CA A 304
A
CA
304
Software
6
BINDING SITE FOR RESIDUE SR A 305
A
SR
305
Software
7
BINDING SITE FOR RESIDUE SR A 306
A
SR
306
Software
5
BINDING SITE FOR RESIDUE PGO A 307
A
PGO
307
Software
12
BINDING SITE FOR RESIDUE EDO A 308
A
EDO
308
Software
5
BINDING SITE FOR RESIDUE EDO A 309
A
EDO
309
Software
3
BINDING SITE FOR RESIDUE PEG A 310
A
PEG
310
Software
4
BINDING SITE FOR RESIDUE GOL A 311
A
GOL
311
Software
5
BINDING SITE FOR RESIDUE AZI Q 101
Q
AZI
101
Software
9
BINDING SITE FOR RESIDUE ZN B 301
B
ZN
301
Software
5
BINDING SITE FOR RESIDUE ZN B 302
B
ZN
302
Software
4
BINDING SITE FOR RESIDUE CA B 303
B
CA
303
Software
6
BINDING SITE FOR RESIDUE SR B 304
B
SR
304
Software
7
BINDING SITE FOR RESIDUE SR B 305
B
SR
305
Software
5
BINDING SITE FOR RESIDUE PGO B 306
B
PGO
306
Software
7
BINDING SITE FOR RESIDUE EDO B 307
B
EDO
307
Software
2
BINDING SITE FOR RESIDUE EDO B 308
B
EDO
308
Software
4
BINDING SITE FOR RESIDUE GOL B 309
B
GOL
309
Software
3
A
ALA
189
B
ALA
84
9
1_555
A
HIS
190
B
HIS
85
9
1_555
A
HIS
226
B
HIS
121
9
1_555
A
ALA
227
B
ALA
122
9
1_555
A
HIS
230
B
HIS
125
9
1_555
A
ZN
302
F
ZN
9
1_555
P
LEU
3
A
LEU
3
9
1_555
P
GLY
4
A
GLY
4
9
1_555
P
PHI
5
A
PHI
5
9
1_555
A
HIS
226
B
HIS
121
5
1_555
A
HIS
230
B
HIS
125
5
1_555
A
HIS
236
B
HIS
131
5
1_555
A
AZI
301
E
AZI
5
1_555
P
GLY
4
A
GLY
4
5
1_555
A
HIS
175
B
HIS
70
4
1_555
A
ASP
177
B
ASP
72
4
1_555
A
HIS
190
B
HIS
85
4
1_555
A
HIS
203
B
HIS
98
4
1_555
A
ASP
182
B
ASP
77
6
1_555
A
GLY
183
B
GLY
78
6
1_555
A
ASP
185
B
ASP
80
6
1_555
A
LEU
187
B
LEU
82
6
1_555
A
ASP
205
B
ASP
100
6
1_555
A
GLU
208
B
GLU
103
6
1_555
A
ASP
165
B
ASP
60
7
1_555
A
GLY
197
B
GLY
92
7
1_555
A
GLN
199
B
GLN
94
7
1_555
A
ASP
201
B
ASP
96
7
1_555
A
HOH
418
AA
HOH
7
1_555
A
HOH
455
AA
HOH
7
1_555
A
HOH
565
AA
HOH
7
1_555
A
ASP
131
B
ASP
26
5
1_555
A
ASP
206
B
ASP
101
5
1_555
A
GLU
208
B
GLU
103
5
1_555
A
PGO
307
K
PGO
5
1_555
A
HOH
434
AA
HOH
5
1_555
A
ASP
131
B
ASP
26
12
1_555
A
GLY
197
B
GLY
92
12
3_444
A
ASP
206
B
ASP
101
12
1_555
A
ASP
207
B
ASP
102
12
1_555
A
GLU
208
B
GLU
103
12
1_555
A
LEU
209
B
LEU
104
12
1_555
A
SR
306
J
SR
12
1_555
A
HOH
424
AA
HOH
12
1_555
A
HOH
457
AA
HOH
12
3_444
A
HOH
532
AA
HOH
12
1_555
A
HOH
551
AA
HOH
12
3_444
A
HOH
569
AA
HOH
12
1_555
A
HIS
266
B
HIS
161
5
1_555
A
GLY
269
B
GLY
164
5
1_555
A
HOH
539
AA
HOH
5
1_555
B
GLY
106
D
GLY
1
5
4_545
B
PHE
107
D
PHE
2
5
4_545
A
LEU
187
B
LEU
82
3
1_555
A
HIS
190
B
HIS
85
3
1_555
A
HOH
413
AA
HOH
3
1_555
A
VAL
216
B
VAL
111
4
1_555
A
GLY
217
B
GLY
112
4
1_555
A
TYR
248
B
TYR
143
4
1_555
A
HOH
437
AA
HOH
4
1_555
A
LEU
114
B
LEU
9
5
1_555
A
GLY
233
B
GLY
128
5
1_555
A
HOH
428
AA
HOH
5
1_555
A
HOH
430
AA
HOH
5
1_555
A
HOH
548
AA
HOH
5
1_555
B
ALA
189
D
ALA
84
9
1_555
B
HIS
190
D
HIS
85
9
1_555
B
HIS
226
D
HIS
121
9
1_555
B
ALA
227
D
ALA
122
9
1_555
B
HIS
230
D
HIS
125
9
1_555
B
ZN
301
Q
ZN
9
1_555
Q
LEU
3
C
LEU
3
9
1_555
Q
GLY
4
C
GLY
4
9
1_555
Q
PHI
5
C
PHI
5
9
1_555
B
HIS
226
D
HIS
121
5
1_555
B
HIS
230
D
HIS
125
5
1_555
B
HIS
236
D
HIS
131
5
1_555
Q
GLY
4
C
GLY
4
5
1_555
Q
AZI
101
P
AZI
5
1_555
B
HIS
175
D
HIS
70
4
1_555
B
ASP
177
D
ASP
72
4
1_555
B
HIS
190
D
HIS
85
4
1_555
B
HIS
203
D
HIS
98
4
1_555
B
ASP
182
D
ASP
77
6
1_555
B
GLY
183
D
GLY
78
6
1_555
B
ASP
185
D
ASP
80
6
1_555
B
LEU
187
D
LEU
82
6
1_555
B
ASP
205
D
ASP
100
6
1_555
B
GLU
208
D
GLU
103
6
1_555
B
ALA
164
D
ALA
59
7
1_555
B
ASP
165
D
ASP
60
7
1_555
B
GLY
197
D
GLY
92
7
1_555
B
GLN
199
D
GLN
94
7
1_555
B
ASP
201
D
ASP
96
7
1_555
B
HOH
451
CA
HOH
7
1_555
B
HOH
455
CA
HOH
7
1_555
B
ASP
131
D
ASP
26
5
1_555
B
ASP
206
D
ASP
101
5
1_555
B
GLU
208
D
GLU
103
5
1_555
B
PGO
306
V
PGO
5
1_555
B
HOH
422
CA
HOH
5
1_555
B
ASP
131
D
ASP
26
7
1_555
B
ASP
206
D
ASP
101
7
1_555
B
ASP
207
D
ASP
102
7
1_555
B
GLU
208
D
GLU
103
7
1_555
B
SR
305
U
SR
7
1_555
B
HOH
423
CA
HOH
7
1_555
B
HOH
573
CA
HOH
7
1_555
B
HIS
117
D
HIS
12
2
4_445
B
HOH
523
CA
HOH
2
1_555
B
TYR
245
D
TYR
140
4
1_555
B
MET
247
D
MET
142
4
1_555
B
HOH
593
CA
HOH
4
1_555
Q
ARG
8
C
ARG
8
4
1_555
B
GLY
217
D
GLY
112
3
1_555
B
TYR
218
D
TYR
113
3
1_555
B
HOH
576
CA
HOH
3
1_555
19
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