78.11
40.265
39.396
27.748
A
O5'
C
1
ATOM
A
O5'
C
1
1
1.00
1
O
59.40
41.002
38.716
26.729
A
C5'
C
1
ATOM
A
C5'
C
1
1
1.00
1
C
67.32
42.420
39.241
26.602
A
C4'
C
1
ATOM
A
C4'
C
1
1
1.00
1
C
61.54
42.380
40.666
26.288
A
O4'
C
1
ATOM
A
O4'
C
1
1
1.00
1
O
64.33
43.319
39.170
27.826
A
C3'
C
1
ATOM
A
C3'
C
1
1
1.00
1
C
71.06
43.915
37.888
27.999
A
O3'
C
1
ATOM
A
O3'
C
1
1
1.00
1
O
62.40
44.344
40.237
27.526
A
C2'
C
1
ATOM
A
C2'
C
1
1
1.00
1
C
69.17
45.223
39.799
26.502
A
O2'
C
1
ATOM
A
O2'
C
1
1
1.00
1
O
59.25
43.472
41.316
26.920
A
C1'
C
1
ATOM
A
C1'
C
1
1
1.00
1
C
51.06
42.913
42.251
27.913
A
N1
C
1
ATOM
A
N1
C
1
1
1.00
1
N
56.86
43.760
43.199
28.470
A
C2
C
1
ATOM
A
C2
C
1
1
1.00
1
C
49.75
44.963
43.235
28.116
A
O2
C
1
ATOM
A
O2
C
1
1
1.00
1
O
47.24
43.254
44.066
29.385
A
N3
C
1
ATOM
A
N3
C
1
1
1.00
1
N
45.09
41.967
43.984
29.726
A
C4
C
1
ATOM
A
C4
C
1
1
1.00
1
C
40.48
41.530
44.867
30.638
A
N4
C
1
ATOM
A
N4
C
1
1
1.00
1
N
46.00
41.073
43.008
29.168
A
C5
C
1
ATOM
A
C5
C
1
1
1.00
1
C
40.86
41.605
42.169
28.266
A
C6
C
1
ATOM
A
C6
C
1
1
1.00
1
C
77.24
44.283
37.389
29.477
A
P
G
2
ATOM
A
P
G
1
2
1.00
1
P
87.44
44.868
36.027
29.325
A
OP1
G
2
ATOM
A
OP1
G
1
2
1.00
1
O
68.11
43.106
37.540
30.380
A
OP2
G
2
ATOM
A
OP2
G
1
2
1.00
1
O
72.16
45.451
38.332
29.987
A
O5'
G
2
ATOM
A
O5'
G
1
2
1.00
1
O
61.67
46.723
38.373
29.334
A
C5'
G
2
ATOM
A
C5'
G
1
2
1.00
1
C
62.08
47.593
39.456
29.912
A
C4'
G
2
ATOM
A
C4'
G
1
2
1.00
1
C
55.12
46.925
40.736
29.684
A
O4'
G
2
ATOM
A
O4'
G
1
2
1.00
1
O
60.24
47.844
39.459
31.401
A
C3'
G
2
ATOM
A
C3'
G
1
2
1.00
1
C
56.54
48.881
38.577
31.811
A
O3'
G
2
ATOM
A
O3'
G
1
2
1.00
1
O
55.73
48.236
40.906
31.641
A
C2'
G
2
ATOM
A
C2'
G
1
2
1.00
1
C
52.37
49.528
41.079
31.039
A
O2'
G
2
ATOM
A
O2'
G
1
2
1.00
1
O
57.37
47.268
41.641
30.734
A
C1'
G
2
ATOM
A
C1'
G
1
2
1.00
1
C
48.09
45.995
42.080
31.358
A
N9
G
2
ATOM
A
N9
G
1
2
1.00
1
N
46.27
44.734
41.555
31.265
A
C8
G
2
ATOM
A
C8
G
1
2
1.00
1
C
44.21
43.851
42.231
31.971
A
N7
G
2
ATOM
A
N7
G
1
2
1.00
1
N
45.71
44.591
43.258
32.558
A
C5
G
2
ATOM
A
C5
G
1
2
1.00
1
C
37.00
44.202
44.313
33.430
A
C6
G
2
ATOM
A
C6
G
1
2
1.00
1
C
42.16
43.060
44.540
33.867
A
O6
G
2
ATOM
A
O6
G
1
2
1.00
1
O
41.71
45.272
45.109
33.771
A
N1
G
2
ATOM
A
N1
G
1
2
1.00
1
N
46.14
46.565
44.930
33.334
A
C2
G
2
ATOM
A
C2
G
1
2
1.00
1
C
44.49
47.523
45.778
33.739
A
N2
G
2
ATOM
A
N2
G
1
2
1.00
1
N
47.49
46.935
43.959
32.528
A
N3
G
2
ATOM
A
N3
G
1
2
1.00
1
N
42.07
45.912
43.174
32.187
A
C4
G
2
ATOM
A
C4
G
1
2
1.00
1
C
64.02
48.882
38.073
33.335
A
P
U
3
ATOM
A
P
U
1
3
1.00
1
P
50.65
50.105
37.241
33.502
A
OP1
U
3
ATOM
A
OP1
U
1
3
1.00
1
O
72.55
47.542
37.505
33.638
A
OP2
U
3
ATOM
A
OP2
U
1
3
1.00
1
O
57.61
49.169
39.312
34.273
A
O5'
U
3
ATOM
A
O5'
U
1
3
1.00
1
O
47.96
50.409
40.016
34.126
A
C5'
U
3
ATOM
A
C5'
U
1
3
1.00
1
C
51.48
50.449
41.146
35.106
A
C4'
U
3
ATOM
A
C4'
U
1
3
1.00
1
C
55.22
49.410
42.086
34.753
A
O4'
U
3
ATOM
A
O4'
U
1
3
1.00
1
O
58.87
50.174
40.759
36.547
A
C3'
U
3
ATOM
A
C3'
U
1
3
1.00
1
C
55.59
51.357
40.300
37.180
A
O3'
U
3
ATOM
A
O3'
U
1
3
1.00
1
O
46.24
49.646
42.048
37.131
A
C2'
U
3
ATOM
A
C2'
U
1
3
1.00
1
C
57.68
50.780
42.871
37.400
A
O2'
U
3
ATOM
A
O2'
U
1
3
1.00
1
O
56.95
48.889
42.666
35.959
A
C1'
U
3
ATOM
A
C1'
U
1
3
1.00
1
C
45.46
47.410
42.453
35.932
A
N1
U
3
ATOM
A
N1
U
1
3
1.00
1
N
41.97
46.697
43.396
36.631
A
C2
U
3
ATOM
A
C2
U
1
3
1.00
1
C
47.30
47.232
44.323
37.231
A
O2
U
3
ATOM
A
O2
U
1
3
1.00
1
O
37.99
45.348
43.214
36.612
A
N3
U
3
ATOM
A
N3
U
1
3
1.00
1
N
43.46
44.650
42.216
35.971
A
C4
U
3
ATOM
A
C4
U
1
3
1.00
1
C
41.41
43.409
42.203
36.054
A
O4
U
3
ATOM
A
O4
U
1
3
1.00
1
O
46.73
45.469
41.264
35.249
A
C5
U
3
ATOM
A
C5
U
1
3
1.00
1
C
43.11
46.808
41.427
35.262
A
C6
U
3
ATOM
A
C6
U
1
3
1.00
1
C
56.36
51.388
39.175
38.338
A
P
A
4
ATOM
A
P
A
1
4
1.00
1
P
66.91
52.819
38.825
38.627
A
OP1
A
4
ATOM
A
OP1
A
1
4
1.00
1
O
57.97
50.459
38.074
38.009
A
OP2
A
4
ATOM
A
OP2
A
1
4
1.00
1
O
52.20
50.829
39.934
39.619
A
O5'
A
4
ATOM
A
O5'
A
1
4
1.00
1
O
57.23
51.522
41.058
40.184
A
C5'
A
4
ATOM
A
C5'
A
1
4
1.00
1
C
55.60
51.154
41.191
41.640
A
C4'
A
4
ATOM
A
C4'
A
1
4
1.00
1
C
52.50
49.721
41.441
41.720
A
O4'
A
4
ATOM
A
O4'
A
1
4
1.00
1
O
49.04
51.361
39.988
42.534
A
C3'
A
4
ATOM
A
C3'
A
1
4
1.00
1
C
46.40
52.702
39.853
42.975
A
O3'
A
4
ATOM
A
O3'
A
1
4
1.00
1
O
52.86
50.394
40.304
43.669
A
C2'
A
4
ATOM
A
C2'
A
1
4
1.00
1
C
55.74
50.937
41.425
44.386
A
O2'
A
4
ATOM
A
O2'
A
1
4
1.00
1
O
50.45
49.191
40.807
42.903
A
C1'
A
4
ATOM
A
C1'
A
1
4
1.00
1
C
43.67
48.193
39.837
42.378
A
N9
A
4
ATOM
A
N9
A
1
4
1.00
1
N
46.25
48.062
39.359
41.104
A
C8
A
4
ATOM
A
C8
A
1
4
1.00
1
C
39.66
47.069
38.517
40.975
A
N7
A
4
ATOM
A
N7
A
1
4
1.00
1
N
45.23
46.520
38.452
42.245
A
C5
A
4
ATOM
A
C5
A
1
4
1.00
1
C
47.29
45.441
37.745
42.801
A
C6
A
4
ATOM
A
C6
A
1
4
1.00
1
C
41.45
44.641
36.898
42.136
A
N6
A
4
ATOM
A
N6
A
1
4
1.00
1
N
40.12
45.208
37.943
44.120
A
N1
A
4
ATOM
A
N1
A
1
4
1.00
1
N
40.65
45.951
38.760
44.843
A
C2
A
4
ATOM
A
C2
A
1
4
1.00
1
C
49.54
46.988
39.476
44.437
A
N3
A
4
ATOM
A
N3
A
1
4
1.00
1
N
49.00
47.205
39.263
43.121
A
C4
A
4
ATOM
A
C4
A
1
4
1.00
1
C
51.04
53.393
38.459
43.313
A
P
C
5
ATOM
A
P
C
1
5
1.00
1
P
67.70
54.817
38.825
43.647
A
OP1
C
5
ATOM
A
OP1
C
1
5
1.00
1
O
60.13
53.192
37.497
42.197
A
OP2
C
5
ATOM
A
OP2
C
1
5
1.00
1
O
46.69
52.751
37.867
44.632
A
O5'
C
5
ATOM
A
O5'
C
1
5
1.00
1
O
50.03
52.771
38.612
45.862
A
C5'
C
5
ATOM
A
C5'
C
1
5
1.00
1
C
54.46
51.797
38.024
46.838
A
C4'
C
5
ATOM
A
C4'
C
1
5
1.00
1
C
54.83
50.436
38.297
46.396
A
O4'
C
5
ATOM
A
O4'
C
1
5
1.00
1
O
55.22
51.815
36.519
46.982
A
C3'
C
5
ATOM
A
C3'
C
1
5
1.00
1
C
52.16
52.832
36.077
47.856
A
O3'
C
5
ATOM
A
O3'
C
1
5
1.00
1
O
50.99
50.448
36.227
47.558
A
C2'
C
5
ATOM
A
C2'
C
1
5
1.00
1
C
55.68
50.549
36.765
48.879
A
O2'
C
5
ATOM
A
O2'
C
1
5
1.00
1
O
58.99
49.603
37.205
46.740
A
C1'
C
5
ATOM
A
C1'
C
1
5
1.00
1
C
53.51
49.057
36.592
45.505
A
N1
C
5
ATOM
A
N1
C
1
5
1.00
1
N
45.71
47.863
35.877
45.652
A
C2
C
5
ATOM
A
C2
C
1
5
1.00
1
C
43.85
47.376
35.821
46.795
A
O2
C
5
ATOM
A
O2
C
1
5
1.00
1
O
43.60
47.320
35.295
44.565
A
N3
C
5
ATOM
A
N3
C
1
5
1.00
1
N
42.89
47.898
35.397
43.362
A
C4
C
5
ATOM
A
C4
C
1
5
1.00
1
C
40.58
47.287
34.789
42.343
A
N4
C
5
ATOM
A
N4
C
1
5
1.00
1
N
45.63
49.113
36.118
43.200
A
C5
C
5
ATOM
A
C5
C
1
5
1.00
1
C
43.03
49.657
36.700
44.292
A
C6
C
5
ATOM
A
C6
C
1
5
1.00
1
C
55.52
53.479
34.620
47.693
A
P
G
6
ATOM
A
P
G
1
6
1.00
1
P
60.66
54.662
34.600
48.585
A
OP1
G
6
ATOM
A
OP1
G
1
6
1.00
1
O
51.73
53.672
34.401
46.237
A
OP2
G
6
ATOM
A
OP2
G
1
6
1.00
1
O
49.32
52.354
33.623
48.242
A
O5'
G
6
ATOM
A
O5'
G
1
6
1.00
1
O
44.76
51.840
33.786
49.564
A
C5'
G
6
ATOM
A
C5'
G
1
6
1.00
1
C
51.07
50.931
32.645
49.939
A
C4'
G
6
ATOM
A
C4'
G
1
6
1.00
1
C
49.26
49.654
32.984
49.303
A
O4'
G
6
ATOM
A
O4'
G
1
6
1.00
1
O
50.65
51.206
31.239
49.465
A
C3'
G
6
ATOM
A
C3'
G
1
6
1.00
1
C
53.44
52.020
30.485
50.362
A
O3'
G
6
ATOM
A
O3'
G
1
6
1.00
1
O
49.43
49.816
30.632
49.366
A
C2'
G
6
ATOM
A
C2'
G
1
6
1.00
1
C
54.39
49.422
30.266
50.685
A
O2'
G
6
ATOM
A
O2'
G
1
6
1.00
1
O
55.58
48.977
31.807
48.882
A
C1'
G
6
ATOM
A
C1'
G
1
6
1.00
1
C
50.99
48.785
31.922
47.402
A
N9
G
6
ATOM
A
N9
G
1
6
1.00
1
N
44.36
49.532
32.603
46.471
A
C8
G
6
ATOM
A
C8
G
1
6
1.00
1
C
40.52
49.071
32.485
45.251
A
N7
G
6
ATOM
A
N7
G
1
6
1.00
1
N
40.56
47.951
31.674
45.406
A
C5
G
6
ATOM
A
C5
G
1
6
1.00
1
C
43.39
47.027
31.189
44.433
A
C6
G
6
ATOM
A
C6
G
1
6
1.00
1
C
42.58
47.045
31.407
43.217
A
O6
G
6
ATOM
A
O6
G
1
6
1.00
1
O
41.26
46.052
30.407
45.020
A
N1
G
6
ATOM
A
N1
G
1
6
1.00
1
N
47.11
45.939
30.101
46.361
A
C2
G
6
ATOM
A
C2
G
1
6
1.00
1
C
44.99
44.912
29.317
46.738
A
N2
G
6
ATOM
A
N2
G
1
6
1.00
1
N
42.88
46.786
30.540
47.277
A
N3
G
6
ATOM
A
N3
G
1
6
1.00
1
N
45.66
47.756
31.316
46.718
A
C4
G
6
ATOM
A
C4
G
1
6
1.00
1
C
41.39
39.354
50.264
29.527
A
N11
NPM
101
HETATM
B
N11
NPM
2
1.00
1
N
36.95
41.764
49.706
29.007
A
N12
NPM
101
HETATM
B
N12
NPM
2
1.00
1
N
51.03
47.714
46.086
22.283
A
N13
NPM
101
HETATM
B
N13
NPM
2
1.00
1
N
60.67
47.916
45.209
19.891
A
N14
NPM
101
HETATM
B
N14
NPM
2
1.00
1
N
40.46
38.066
50.598
29.751
A
C1A
NPM
101
HETATM
B
C1A
NPM
2
1.00
1
C
49.93
37.239
50.009
30.720
A
C1B
NPM
101
HETATM
B
C1B
NPM
2
1.00
1
C
46.63
37.768
49.053
31.518
A
C1C
NPM
101
HETATM
B
C1C
NPM
2
1.00
1
C
46.14
39.075
48.663
31.280
A
C1D
NPM
101
HETATM
B
C1D
NPM
2
1.00
1
C
39.56
39.850
49.295
30.330
A
C1E
NPM
101
HETATM
B
C1E
NPM
2
1.00
1
C
35.53
41.240
48.972
29.973
A
C1F
NPM
101
HETATM
B
C1F
NPM
2
1.00
1
C
38.90
43.133
49.357
28.601
A
C1G
NPM
101
HETATM
B
C1G
NPM
2
1.00
1
C
41.05
44.145
50.227
28.891
A
C1H
NPM
101
HETATM
B
C1H
NPM
2
1.00
1
C
36.99
45.473
49.937
28.495
A
C1I
NPM
101
HETATM
B
C1I
NPM
2
1.00
1
C
41.54
45.771
48.760
27.860
A
C1J
NPM
101
HETATM
B
C1J
NPM
2
1.00
1
C
39.79
44.729
47.867
27.559
A
C1K
NPM
101
HETATM
B
C1K
NPM
2
1.00
1
C
39.47
43.408
48.186
27.903
A
C1L
NPM
101
HETATM
B
C1L
NPM
2
1.00
1
C
40.33
47.218
48.479
27.473
A
C1M
NPM
101
HETATM
B
C1M
NPM
2
1.00
1
C
42.96
47.326
47.873
26.084
A
C1N
NPM
101
HETATM
B
C1N
NPM
2
1.00
1
C
48.86
48.055
46.740
25.880
A
C1O
NPM
101
HETATM
B
C1O
NPM
2
1.00
1
C
41.58
48.201
46.148
24.637
A
C1P
NPM
101
HETATM
B
C1P
NPM
2
1.00
1
C
41.96
47.551
46.714
23.591
A
C1Q
NPM
101
HETATM
B
C1Q
NPM
2
1.00
1
C
39.47
46.831
47.838
23.760
A
C1R
NPM
101
HETATM
B
C1R
NPM
2
1.00
1
C
38.20
46.717
48.429
24.993
A
C1S
NPM
101
HETATM
B
C1S
NPM
2
1.00
1
C
48.04
48.655
46.634
21.580
A
C1T
NPM
101
HETATM
B
C1T
NPM
2
1.00
1
C
55.75
48.686
46.304
20.181
A
C1U
NPM
101
HETATM
B
C1U
NPM
2
1.00
1
C
63.49
49.414
47.015
19.221
A
C1V
NPM
101
HETATM
B
C1V
NPM
2
1.00
1
C
69.34
49.337
46.562
17.914
A
C1W
NPM
101
HETATM
B
C1W
NPM
2
1.00
1
C
68.29
48.539
45.458
17.640
A
C1X
NPM
101
HETATM
B
C1X
NPM
2
1.00
1
C
65.53
47.856
44.794
18.638
A
C1Y
NPM
101
HETATM
B
C1Y
NPM
2
1.00
1
C
38.18
40.533
50.957
28.085
A
FE
FE2
102
HETATM
C
FE
FE2
3
0.33
1
FE
52.28
47.122
44.368
21.495
A
FE
FE2
103
HETATM
D
FE
FE2
3
0.33
1
FE
41.97
38.172
38.428
40.326
A
N11
NPM
104
HETATM
E
N11
NPM
2
1.00
1
N
38.87
38.707
40.838
40.862
A
N12
NPM
104
HETATM
E
N12
NPM
2
1.00
1
N
45.79
45.438
46.805
44.446
A
N13
NPM
104
HETATM
E
N13
NPM
2
1.00
1
N
57.87
47.771
47.113
45.483
A
N14
NPM
104
HETATM
E
N14
NPM
2
1.00
1
N
43.67
37.962
37.152
39.961
A
C1A
NPM
104
HETATM
E
C1A
NPM
2
1.00
1
C
50.38
36.887
36.426
40.491
A
C1B
NPM
104
HETATM
E
C1B
NPM
2
1.00
1
C
51.25
36.039
36.995
41.376
A
C1C
NPM
104
HETATM
E
C1C
NPM
2
1.00
1
C
50.98
36.298
38.292
41.798
A
C1D
NPM
104
HETATM
E
C1D
NPM
2
1.00
1
C
43.57
37.321
38.996
41.220
A
C1E
NPM
104
HETATM
E
C1E
NPM
2
1.00
1
C
36.47
37.639
40.400
41.471
A
C1F
NPM
104
HETATM
E
C1F
NPM
2
1.00
1
C
38.04
39.089
42.200
41.209
A
C1G
NPM
104
HETATM
E
C1G
NPM
2
1.00
1
C
36.08
38.883
43.209
40.289
A
C1H
NPM
104
HETATM
E
C1H
NPM
2
1.00
1
C
35.74
39.304
44.503
40.601
A
C1I
NPM
104
HETATM
E
C1I
NPM
2
1.00
1
C
39.15
39.824
44.823
41.828
A
C1J
NPM
104
HETATM
E
C1J
NPM
2
1.00
1
C
40.81
40.012
43.769
42.748
A
C1K
NPM
104
HETATM
E
C1K
NPM
2
1.00
1
C
35.13
39.703
42.454
42.419
A
C1L
NPM
104
HETATM
E
C1L
NPM
2
1.00
1
C
40.55
40.146
46.264
42.218
A
C1M
NPM
104
HETATM
E
C1M
NPM
2
1.00
1
C
40.49
41.534
46.430
42.821
A
C1N
NPM
104
HETATM
E
C1N
NPM
2
1.00
1
C
45.07
41.785
47.225
43.910
A
C1O
NPM
104
HETATM
E
C1O
NPM
2
1.00
1
C
40.40
43.035
47.397
44.482
A
C1P
NPM
104
HETATM
E
C1P
NPM
2
1.00
1
C
44.37
44.073
46.704
43.919
A
C1Q
NPM
104
HETATM
E
C1Q
NPM
2
1.00
1
C
47.19
43.832
45.924
42.842
A
C1R
NPM
104
HETATM
E
C1R
NPM
2
1.00
1
C
36.17
42.592
45.767
42.265
A
C1S
NPM
104
HETATM
E
C1S
NPM
2
1.00
1
C
47.73
46.184
47.668
43.851
A
C1T
NPM
104
HETATM
E
C1T
NPM
2
1.00
1
C
59.85
47.564
47.734
44.283
A
C1U
NPM
104
HETATM
E
C1U
NPM
2
1.00
1
C
55.14
48.602
48.359
43.580
A
C1V
NPM
104
HETATM
E
C1V
NPM
2
1.00
1
C
63.31
49.870
48.319
44.123
A
C1W
NPM
104
HETATM
E
C1W
NPM
2
1.00
1
C
67.72
50.042
47.694
45.348
A
C1X
NPM
104
HETATM
E
C1X
NPM
2
1.00
1
C
65.05
48.996
47.061
45.984
A
C1Y
NPM
104
HETATM
E
C1Y
NPM
2
1.00
1
C
40.70
39.592
39.592
39.592
A
FE
FE2
105
HETATM
F
FE
FE2
3
0.33
1
FE
47.17
46.177
46.177
46.177
A
FE
FE2
106
HETATM
G
FE
FE2
3
0.33
1
FE
46.78
45.334
36.852
39.062
A
O
HOH
201
HETATM
H
O
HOH
4
1.00
1
O
63.32
44.982
34.566
36.642
A
O
HOH
202
HETATM
H
O
HOH
4
1.00
1
O
53.83
48.337
40.475
46.600
A
O
HOH
203
HETATM
H
O
HOH
4
1.00
1
O
45.31
40.652
43.447
34.128
A
O
HOH
204
HETATM
H
O
HOH
4
1.00
1
O
57.85
44.616
28.564
49.588
A
O
HOH
205
HETATM
H
O
HOH
4
1.00
1
O
48.57
47.531
38.800
37.716
A
O
HOH
206
HETATM
H
O
HOH
4
0.50
1
O
54.06
37.665
53.824
30.952
A
O
HOH
207
HETATM
H
O
HOH
4
0.33
1
O
66.58
38.118
42.092
31.782
A
O
HOH
208
HETATM
H
O
HOH
4
1.00
1
O
53.65
38.464
52.462
33.237
A
O
HOH
209
HETATM
H
O
HOH
4
1.00
1
O
54.62
40.280
50.449
33.971
A
O
HOH
210
HETATM
H
O
HOH
4
1.00
1
O
63.68
51.036
36.648
40.793
A
O
HOH
211
HETATM
H
O
HOH
4
1.00
1
O
49.26
48.033
34.633
39.443
A
O
HOH
212
HETATM
H
O
HOH
4
1.00
1
O
63.63
45.917
33.633
38.816
A
O
HOH
213
HETATM
H
O
HOH
4
1.00
1
O
47.37
43.143
50.985
32.638
A
O
HOH
214
HETATM
H
O
HOH
4
1.00
1
O
55.73
38.776
44.924
30.933
A
O
HOH
215
HETATM
H
O
HOH
4
1.00
1
O
50.41
46.131
29.675
36.548
A
O
HOH
216
HETATM
H
O
HOH
4
1.00
1
O
72.25
41.258
41.014
32.624
A
O
HOH
217
HETATM
H
O
HOH
4
1.00
1
O
46.44
42.365
40.180
35.253
A
O
HOH
218
HETATM
H
O
HOH
4
0.50
1
O
56.73
57.219
35.203
49.988
A
O
HOH
219
HETATM
H
O
HOH
4
0.50
1
O
60.30
41.672
28.165
27.234
A
O
HOH
220
HETATM
H
O
HOH
4
0.50
1
O
61.91
42.870
38.279
33.912
A
O
HOH
221
HETATM
H
O
HOH
4
0.50
1
O
70.55
45.942
36.330
34.792
A
O
HOH
222
HETATM
H
O
HOH
4
0.50
1
O
52.38
48.422
34.687
35.707
A
O
HOH
223
HETATM
H
O
HOH
4
0.50
1
O
48.67
43.392
52.895
34.883
A
O
HOH
224
HETATM
H
O
HOH
4
0.50
1
O
54.34
59.075
39.322
40.956
A
O
HOH
225
HETATM
H
O
HOH
4
0.50
1
O
49.28
55.820
36.127
44.721
A
O
HOH
226
HETATM
H
O
HOH
4
0.50
1
O
67.75
56.744
37.020
41.729
A
O
HOH
227
HETATM
H
O
HOH
4
0.50
1
O
60.81
44.276
32.919
29.422
A
O
HOH
228
HETATM
H
O
HOH
4
0.50
1
O
53.63
44.562
28.803
23.366
A
O
HOH
229
HETATM
H
O
HOH
4
0.50
1
O
56.60
43.531
30.625
27.293
A
O
HOH
230
HETATM
H
O
HOH
4
0.50
1
O
55.83
46.270
32.666
27.868
A
O
HOH
231
HETATM
H
O
HOH
4
0.50
1
O
67.00
50.385
46.006
33.842
A
O
HOH
232
HETATM
H
O
HOH
4
1.00
1
O
85.58
51.079
45.285
41.662
A
O
HOH
233
HETATM
H
O
HOH
4
1.00
1
O
67.22
48.338
46.297
38.878
A
O
HOH
234
HETATM
H
O
HOH
4
1.00
1
O
54.72
49.974
44.410
32.238
A
O
HOH
235
HETATM
H
O
HOH
4
0.50
1
O
61.64
50.144
47.511
35.796
A
O
HOH
236
HETATM
H
O
HOH
4
1.00
1
O
66.66
39.715
26.271
28.292
A
O
HOH
237
HETATM
H
O
HOH
4
0.50
1
O
65.84
44.504
26.621
50.990
A
O
HOH
238
HETATM
H
O
HOH
4
1.00
1
O
47.67
47.120
42.314
27.172
A
O
HOH
239
HETATM
H
O
HOH
4
0.50
1
O
1.0167
0.3322
0.2500
0.8187
0.2605
1.0992
A
P
G
2
A
P
G
2
P
0.7483
0.3113
0.1063
0.8050
0.2155
0.8792
A
P
U
3
A
P
U
3
P
0.6047
0.2439
0.0548
0.7680
0.1745
0.7686
A
P
A
4
A
P
A
4
P
0.5973
0.1199
-0.0015
0.6728
0.1008
0.6693
A
P
C
5
A
P
C
5
P
0.7333
0.1644
-0.0767
0.7619
0.0758
0.6144
A
P
G
6
A
P
G
6
P
0.4835
-0.0061
-0.0061
0.4835
0.0061
0.4835
A
FE
FE2
102
C
FE
FE2
FE
0.6621
0.0818
0.0818
0.6621
-0.0818
0.6621
A
FE
FE2
103
D
FE
FE2
FE
0.5155
0.0243
0.0243
0.5155
0.0243
0.5155
A
FE
FE2
105
F
FE
FE2
FE
0.5974
-0.0384
-0.0384
0.5974
-0.0384
0.5974
A
FE
FE2
106
G
FE
FE2
FE
0.021860
0.000000
0.000000
0.000000
0.021860
0.000000
0.000000
0.000000
0.021860
0.00000
0.00000
0.00000
Sigel, R.K.O.
Schnabl, J.A.
Freisinger, E.
Spingler, B.
Hannon, M.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
45.745
45.745
45.745
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
Fe 2
55.845
FE (II) ION
non-polymer
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
H2 O
18.015
WATER
non-polymer
C25 H20 N4
376.453
N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)-PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
1,1-BIS(N-(4-PHENYL)-2-PYRIDYLCARBOXALDIMINE)METHANE
non-polymer
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
R
C
N
49
N
O
N
50
R
C
N
51
N
N
N
52
N
C
N
53
N
O
N
54
N
N
N
55
N
C
N
56
N
N
N
57
N
C
N
58
N
C
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
FE
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
R
C
N
85
N
O
N
86
R
C
Y
87
N
N
Y
88
N
C
Y
89
N
N
Y
90
N
C
N
91
N
C
N
92
N
O
N
93
N
N
N
94
N
C
N
95
N
N
N
96
N
N
Y
97
N
C
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
O
N
113
N
H
N
114
N
H
Y
115
N
N
N
116
N
N
N
117
N
N
Y
118
N
N
Y
119
N
C
Y
120
N
C
Y
121
N
C
Y
122
N
C
Y
123
N
C
N
124
N
C
Y
125
N
C
Y
126
N
C
Y
127
N
C
Y
128
N
C
Y
129
N
C
Y
130
N
C
N
131
N
C
Y
132
N
C
Y
133
N
C
Y
134
N
C
Y
135
N
C
Y
136
N
C
Y
137
N
C
N
138
N
C
Y
139
N
C
Y
140
N
C
Y
141
N
C
Y
142
N
C
Y
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
O
N
165
N
P
N
166
N
O
N
167
N
O
N
168
N
O
N
169
N
C
N
170
R
C
N
171
N
O
N
172
S
C
N
173
N
O
N
174
R
C
N
175
N
O
N
176
R
C
N
177
N
N
N
178
N
C
N
179
N
O
N
180
N
N
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
Y
100
N
sing
Y
101
N
sing
Y
102
N
doub
N
103
N
sing
Y
104
N
sing
N
105
N
sing
Y
106
N
doub
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
Y
118
N
doub
Y
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
doub
Y
124
N
sing
Y
125
N
doub
Y
126
N
sing
N
127
N
sing
Y
128
N
doub
N
129
N
sing
Y
130
N
sing
N
131
N
sing
Y
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
Y
136
N
sing
Y
137
N
doub
Y
138
N
doub
N
139
N
sing
Y
140
N
sing
N
141
N
sing
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
Y
150
N
doub
Y
151
N
sing
Y
152
N
sing
N
153
N
sing
Y
154
N
doub
N
155
N
sing
Y
156
N
sing
Y
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
Y
162
N
doub
Y
163
N
sing
N
164
N
sing
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
GE
Angew.Chem.Int.Ed.Engl.
9999
1433-7851
52
11513
11516
10.1002/anie.201305079
24039102
Binding of a designed anti-cancer drug to the central cavity of an RNA three-way junction.
2013
10.2210/pdb4jiy/pdb
pdb_00004jiy
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
2
MIRROR, BARTELS MONOCHROMATOR, DUAL CHANNEL CUT CRYSTALS, TOROIDAL MIRROR
CCD
2009-12-10
MARMOSAIC 225 mm CCD
MIRROR, BARTELS MONOCHROMATOR, DUAL CHANNEL CUT CRYSTALS, TOROIDAL MIRROR
CCD
2009-09-12
MARMOSAIC 225 mm CCD
BARTELS MONOCHROMATOR
SINGLE WAVELENGTH
M
x-ray
1
BARTELS MONOCHROMATOR
MAD
M
x-ray
1
0.9999
1.0
X06DA
SLS
0.9999
0.9999
SYNCHROTRON
SLS BEAMLINE X06DA
X06DA
SLS
0.9999
SYNCHROTRON
SLS BEAMLINE X06DA
1891.189
5'-(CGUACG)-3'
1
syn
polymer
376.453
N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)-PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
2
syn
non-polymer
55.845
FE (II) ION
4
syn
non-polymer
18.015
water
39
nat
water
no
no
CGUACG
CGUACG
A
polyribonucleotide
n
n
n
n
n
n
2
4.22
70.84
THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS.
VAPOR DIFFUSION, SITTING DROP
8.5
20% PEG 400, 0.18M MAGNESIUM ACETATE, 0.05M TRIS CHLORIDE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K. 15% PEG 400, 0.165M MAGNESIUM ACETATE, 0.05M TRIS CHLORIDE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K
293.15
VAPOR DIFFUSION, SITTING DROP
8.5
15% PEG 400, 0.165M MAGNESIUM ACETATE, 0.05M TRIS CHLORIDE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K
293.15
-2.229
1
19
A
1
A
6
-0.143
A_C1:G6_A
1
-7.943
0.184
0.189
-0.195
-4.570
1
19
A
2
A
5
3.891
A_G2:C5_A
2
-21.204
-0.452
0.135
-0.268
-6.662
1
20
A
3
A
4
3.883
A_U3:A4_A
3
-15.620
0.138
0.279
-0.275
2.336
31.773
A
A
1
2
21.086
A
A
6
5
3.123
11.302
0.499
-1.739
AA_C1G2:C5G6_AA
1
0.890
-1.660
29.730
-4.966
-0.770
3.093
37.096
A
A
2
3
8.390
A
A
5
4
3.308
5.320
0.035
-1.312
AA_G2U3:A4C5_AA
2
-0.824
1.300
36.717
-2.762
-0.163
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Database references
Database references
Data collection
Database references
Derived calculations
1
0
2013-09-04
1
1
2013-10-02
1
2
2013-11-06
1
3
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The structure of a three-way DNA junction in complex with a metallo-supramolecular helicate reveals a new target for drugs
Distinct recognition of three-way DNA junctions by a thioester variant of a metallo-supramolecular cylinder ('helicate')
Distinct recognition of three-way DNA junctions by the two enantiomers of a metallo-supramolecular cylinder ('helicate')
RCSB
Y
RCSB
2013-03-07
REL
REL
NPM
N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)-PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
FE2
FE (II) ION
HOH
water
NPM
21
2
NPM
NPM
101
A
FE2
22
3
FE2
FE2
102
A
FE2
23
3
FE2
FE2
103
A
NPM
41
2
NPM
NPM
104
A
FE2
42
3
FE2
FE2
105
A
FE2
43
3
FE2
FE2
106
A
HOH
101
4
HOH
HOH
201
A
HOH
102
4
HOH
HOH
202
A
HOH
103
4
HOH
HOH
203
A
HOH
104
4
HOH
HOH
204
A
HOH
105
4
HOH
HOH
205
A
HOH
108
4
HOH
HOH
206
A
HOH
110
4
HOH
HOH
207
A
HOH
111
4
HOH
HOH
208
A
HOH
112
4
HOH
HOH
209
A
HOH
113
4
HOH
HOH
210
A
HOH
114
4
HOH
HOH
211
A
HOH
115
4
HOH
HOH
212
A
HOH
116
4
HOH
HOH
213
A
HOH
117
4
HOH
HOH
214
A
HOH
118
4
HOH
HOH
215
A
HOH
119
4
HOH
HOH
216
A
HOH
120
4
HOH
HOH
217
A
HOH
121
4
HOH
HOH
218
A
HOH
122
4
HOH
HOH
219
A
HOH
123
4
HOH
HOH
220
A
HOH
124
4
HOH
HOH
221
A
HOH
125
4
HOH
HOH
222
A
HOH
126
4
HOH
HOH
223
A
HOH
127
4
HOH
HOH
224
A
HOH
128
4
HOH
HOH
225
A
HOH
129
4
HOH
HOH
226
A
HOH
130
4
HOH
HOH
227
A
HOH
132
4
HOH
HOH
228
A
HOH
133
4
HOH
HOH
229
A
HOH
134
4
HOH
HOH
230
A
HOH
135
4
HOH
HOH
231
A
HOH
136
4
HOH
HOH
232
A
HOH
138
4
HOH
HOH
233
A
HOH
139
4
HOH
HOH
234
A
HOH
140
4
HOH
HOH
235
A
HOH
141
4
HOH
HOH
236
A
HOH
142
4
HOH
HOH
237
A
HOH
143
4
HOH
HOH
238
A
HOH
145
4
HOH
HOH
239
A
C
1
n
1
C
1
A
G
2
n
2
G
2
A
U
3
n
3
U
3
A
A
4
n
4
A
4
A
C
5
n
5
C
5
A
G
6
n
6
G
6
A
0.224
0.234
0.271
0.282
211
242
5.000
4030
author_and_software_defined_assembly
PISA
3
trimeric
4090
-67
3040
A
NPM
101
B
N12
NPM
1_555
A
FE2
102
C
FE
FE2
1_555
A
NPM
101
B
N11
NPM
1_555
79.1
A
NPM
101
B
N14
NPM
1_555
A
FE2
103
D
FE
FE2
1_555
A
NPM
101
B
N13
NPM
1_555
80.4
A
NPM
104
E
N11
NPM
1_555
A
FE2
105
F
FE
FE2
1_555
A
NPM
104
E
N12
NPM
1_555
79.2
A
NPM
104
E
N14
NPM
1_555
A
FE2
106
G
FE
FE2
1_555
A
NPM
104
E
N13
NPM
1_555
81.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_555
z,x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_555
y,z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
FE2
102
C
FE2
1
A
FE2
103
D
FE2
1
A
FE2
105
F
FE2
1
A
FE2
106
G
FE2
1
A
HOH
207
H
HOH
51.2
0.2709
0.224
1.91
26.41
242
4814
4030
5.000
83.7
RANDOM
1,2
4.000
2
MAD
KLOSTERMAN & SINE
1.91
26.41
39
226
62
125
0
0.009
0.027
0.040
0.008
0.004
0.164
1.910
45.745
4JIY
4826
4030
4
2.000
0.02040
1,2
27.0600
7.500
99.7
0.38470
1.91
2.01
2.670
703
0.38470
1,2
0.99
98.7
data collection
RemDAq
phasing
SHELXD
refinement
SHELXL-97
data reduction
XDS
data reduction
XPREP
RNA three-way junction stabilized by a supramolecular di-iron(II) cylinder drug
1
N
N
2
N
N
3
N
N
3
N
N
2
N
N
3
N
N
3
N
N
4
N
N
BIOMOLECULE: 1, 2
SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
BURIED SURFACE AREA.
REMARK: THE RNA THREE-WAY JUNCTION IS GENERATED FROM THE ASYMMETRIC
UNIT BY THE OPERATIONS. THE TERMINAL 1/3 CYLINDER LIGANDS ARE PART
OF THE INFINITE CRYSTAL LATTICE.
COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
BIOMOLECULE: 1
AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC
SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC
SOFTWARE USED: PISA
TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2
SURFACE AREA OF THE COMPLEX: 3870 ANGSTROM**2
CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL
APPLY THE FOLLOWING TO CHAINS: A
BIOMT1 1 1.000000 0.000000 0.000000 0.00000
BIOMT2 1 0.000000 1.000000 0.000000 0.00000
BIOMT3 1 0.000000 0.000000 1.000000 0.00000
BIOMT1 2 0.000000 0.000000 1.000000 0.00000
BIOMT2 2 1.000000 0.000000 0.000000 0.00000
BIOMT3 2 0.000000 1.000000 0.000000 0.00000
BIOMT1 3 0.000000 1.000000 0.000000 0.00000
BIOMT2 3 0.000000 0.000000 1.000000 0.00000
BIOMT3 3 1.000000 0.000000 0.000000 0.00000
BIOMOLECULE: 2
AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC
APPLY THE FOLLOWING TO CHAINS: A
BIOMT1 1 1.000000 0.000000 0.000000 0.00000
BIOMT2 1 0.000000 1.000000 0.000000 0.00000
BIOMT3 1 0.000000 0.000000 1.000000 0.00000
BIOMT1 2 -1.000000 0.000000 0.000000 68.61750
BIOMT2 2 0.000000 -1.000000 0.000000 91.49000
BIOMT3 2 0.000000 0.000000 1.000000 22.87250
BIOMT1 3 -1.000000 0.000000 0.000000 91.49000
BIOMT2 3 0.000000 1.000000 0.000000 -22.87250
BIOMT3 3 0.000000 0.000000 -1.000000 68.61750
BIOMT1 4 0.000000 0.000000 1.000000 0.00000
BIOMT2 4 1.000000 0.000000 0.000000 0.00000
BIOMT3 4 0.000000 1.000000 0.000000 0.00000
BIOMT1 5 0.000000 0.000000 1.000000 22.87250
BIOMT2 5 -1.000000 0.000000 0.000000 68.61750
BIOMT3 5 0.000000 -1.000000 0.000000 91.49000
BIOMT1 6 0.000000 0.000000 -1.000000 68.61750
BIOMT2 6 -1.000000 0.000000 0.000000 91.49000
BIOMT3 6 0.000000 1.000000 0.000000 -22.87250
BIOMT1 7 0.000000 1.000000 0.000000 0.00000
BIOMT2 7 0.000000 0.000000 1.000000 0.00000
BIOMT3 7 1.000000 0.000000 0.000000 0.00000
BIOMT1 8 0.000000 -1.000000 0.000000 91.49000
BIOMT2 8 0.000000 0.000000 1.000000 22.87250
BIOMT3 8 -1.000000 0.000000 0.000000 68.61750
BIOMT1 9 0.000000 1.000000 0.000000 -22.87250
BIOMT2 9 0.000000 0.000000 -1.000000 68.61750
BIOMT3 9 -1.000000 0.000000 0.000000 91.49000
metalc
1.983
A
NPM
101
B
N12
NPM
1_555
A
FE2
102
C
FE
FE2
1_555
metalc
1.987
A
NPM
101
B
N11
NPM
1_555
A
FE2
102
C
FE
FE2
1_555
metalc
1.978
A
NPM
101
B
N14
NPM
1_555
A
FE2
103
D
FE
FE2
1_555
metalc
1.981
A
NPM
101
B
N13
NPM
1_555
A
FE2
103
D
FE
FE2
1_555
metalc
1.977
A
NPM
104
E
N11
NPM
1_555
A
FE2
105
F
FE
FE2
1_555
metalc
1.987
A
NPM
104
E
N12
NPM
1_555
A
FE2
105
F
FE
FE2
1_555
metalc
1.974
A
NPM
104
E
N14
NPM
1_555
A
FE2
106
G
FE
FE2
1_555
metalc
1.984
A
NPM
104
E
N13
NPM
1_555
A
FE2
106
G
FE
FE2
1_555
hydrog
WATSON-CRICK
A
C
1
A
N3
C
1
1_555
A
G
6
A
N1
G
6
5_555
hydrog
WATSON-CRICK
A
C
1
A
N4
C
1
1_555
A
G
6
A
O6
G
6
5_555
hydrog
WATSON-CRICK
A
C
1
A
O2
C
1
1_555
A
G
6
A
N2
G
6
5_555
hydrog
WATSON-CRICK
A
G
2
A
N1
G
2
1_555
A
C
5
A
N3
C
5
5_555
hydrog
WATSON-CRICK
A
G
2
A
N2
G
2
1_555
A
C
5
A
O2
C
5
5_555
hydrog
WATSON-CRICK
A
G
2
A
O6
G
2
1_555
A
C
5
A
N4
C
5
5_555
hydrog
WATSON-CRICK
A
U
3
A
N3
U
3
1_555
A
A
4
A
N1
A
4
5_555
hydrog
WATSON-CRICK
A
U
3
A
O4
U
3
1_555
A
A
4
A
N6
A
4
5_555
RNA
RNA, THREE-WAY JUNCTION, DRUG-RNA COMPLEX, RNA STRUCTURE RECOGNITION, CYLINDER, SUPRAMOLECULE
4JIY
PDB
1
4JIY
CGUACG
1
6
4JIY
1
6
4JIY
A
1
1
6
BINDING SITE FOR RESIDUE NPM A 101
A
NPM
101
Software
8
BINDING SITE FOR RESIDUE FE2 A 102
A
FE2
102
Software
3
BINDING SITE FOR RESIDUE FE2 A 103
A
FE2
103
Software
3
BINDING SITE FOR RESIDUE NPM A 104
A
NPM
104
Software
9
BINDING SITE FOR RESIDUE FE2 A 105
A
FE2
105
Software
3
BINDING SITE FOR RESIDUE FE2 A 106
A
FE2
106
Software
3
A
C
1
A
C
1
8
10_756
A
G
6
A
G
6
8
5_555
A
FE2
102
C
FE2
8
10_756
A
FE2
102
C
FE2
8
1_555
A
FE2
102
C
FE2
8
7_674
A
FE2
103
D
FE2
8
10_756
A
FE2
103
D
FE2
8
7_674
A
FE2
103
D
FE2
8
1_555
A
NPM
101
B
NPM
3
1_555
A
NPM
101
B
NPM
3
7_674
A
NPM
101
B
NPM
3
10_756
A
NPM
101
B
NPM
3
7_674
A
NPM
101
B
NPM
3
10_756
A
NPM
101
B
NPM
3
1_555
A
U
3
A
U
3
9
5_555
A
A
4
A
A
4
9
5_555
A
A
4
A
A
4
9
9_555
A
FE2
105
F
FE2
9
5_555
A
FE2
105
F
FE2
9
9_555
A
FE2
105
F
FE2
9
1_555
A
FE2
106
G
FE2
9
9_555
A
FE2
106
G
FE2
9
5_555
A
FE2
106
G
FE2
9
1_555
A
NPM
104
E
NPM
3
5_555
A
NPM
104
E
NPM
3
1_555
A
NPM
104
E
NPM
3
9_555
A
NPM
104
E
NPM
3
5_555
A
NPM
104
E
NPM
3
9_555
A
NPM
104
E
NPM
3
1_555
198
P 21 3