0.011168
0.000000
0.000000
0.000000
0.011168
0.000000
0.000000
0.000000
0.011168
0.00000
0.00000
0.00000
Hoh, F.
Rouhana, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
89.540
89.540
89.540
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
56
8497
8511
10.1021/jm4009357
24112024
Fragment-based identification of a locus in the Sec7 domain of Arno for the design of protein-protein interaction inhibitors
2013
10.2210/pdb4jmi/pdb
pdb_00004jmi
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2012-12-10
MARMOSAIC 225 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
0.97628
1.0
ID23-2
ESRF
0.97628
SYNCHROTRON
ESRF BEAMLINE ID23-2
23029.312
Cytohesin-2
Sec7 domain, UNP residues 56-251
1
man
polymer
18.015
water
291
nat
water
ARF exchange factor, ARF nucleotide-binding site opener, Protein ARNO, PH, SEC7 and coiled-coil domain-containing protein 2
no
no
GSHMSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAFVD
LHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSFAVIMLNTSLHNPNVRDKPGLE
RFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGN
GSHMSKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAFVD
LHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSFAVIMLNTSLHNPNVRDKPGLE
RFVAMNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
CYTH2, ARNO, PSCD2, PSCD2L
9606
Homo sapiens
562
Escherichia coli
BL21(DE3)
PLASMID
pET28-a
1
2.60
52.65
VAPOR DIFFUSION, SITTING DROP
7.5
0.1M MgSO4, Peg 5000 MME 18%, 0.1M Mes pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
repository
Initial release
Database references
Structure summary
Database references
Data collection
Database references
Refinement description
1
0
2013-10-23
1
1
2013-10-30
1
2
2013-11-06
1
3
2014-04-23
1
4
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
PDBJ
2013-03-14
REL
REL
HOH
water
1PBV
PDB
experimental model
HOH
246
2
HOH
HOH
301
A
HOH
247
2
HOH
HOH
302
A
HOH
248
2
HOH
HOH
303
A
HOH
249
2
HOH
HOH
304
A
HOH
250
2
HOH
HOH
305
A
HOH
251
2
HOH
HOH
306
A
HOH
252
2
HOH
HOH
307
A
HOH
253
2
HOH
HOH
308
A
HOH
254
2
HOH
HOH
309
A
HOH
255
2
HOH
HOH
310
A
HOH
256
2
HOH
HOH
311
A
HOH
257
2
HOH
HOH
312
A
HOH
258
2
HOH
HOH
313
A
HOH
259
2
HOH
HOH
314
A
HOH
260
2
HOH
HOH
315
A
HOH
261
2
HOH
HOH
316
A
HOH
262
2
HOH
HOH
317
A
HOH
263
2
HOH
HOH
318
A
HOH
264
2
HOH
HOH
319
A
HOH
265
2
HOH
HOH
320
A
HOH
266
2
HOH
HOH
321
A
HOH
267
2
HOH
HOH
322
A
HOH
268
2
HOH
HOH
323
A
HOH
269
2
HOH
HOH
324
A
HOH
270
2
HOH
HOH
325
A
HOH
271
2
HOH
HOH
326
A
HOH
272
2
HOH
HOH
327
A
HOH
273
2
HOH
HOH
328
A
HOH
274
2
HOH
HOH
329
A
HOH
275
2
HOH
HOH
330
A
HOH
276
2
HOH
HOH
331
A
HOH
277
2
HOH
HOH
332
A
HOH
278
2
HOH
HOH
333
A
HOH
279
2
HOH
HOH
334
A
HOH
280
2
HOH
HOH
335
A
HOH
281
2
HOH
HOH
336
A
HOH
282
2
HOH
HOH
337
A
HOH
283
2
HOH
HOH
338
A
HOH
284
2
HOH
HOH
339
A
HOH
285
2
HOH
HOH
340
A
HOH
286
2
HOH
HOH
341
A
HOH
287
2
HOH
HOH
342
A
HOH
288
2
HOH
HOH
343
A
HOH
289
2
HOH
HOH
344
A
HOH
290
2
HOH
HOH
345
A
HOH
291
2
HOH
HOH
346
A
HOH
292
2
HOH
HOH
347
A
HOH
293
2
HOH
HOH
348
A
HOH
294
2
HOH
HOH
349
A
HOH
295
2
HOH
HOH
350
A
HOH
296
2
HOH
HOH
351
A
HOH
297
2
HOH
HOH
352
A
HOH
298
2
HOH
HOH
353
A
HOH
299
2
HOH
HOH
354
A
HOH
300
2
HOH
HOH
355
A
HOH
301
2
HOH
HOH
356
A
HOH
302
2
HOH
HOH
357
A
HOH
303
2
HOH
HOH
358
A
HOH
304
2
HOH
HOH
359
A
HOH
305
2
HOH
HOH
360
A
HOH
306
2
HOH
HOH
361
A
HOH
307
2
HOH
HOH
362
A
HOH
308
2
HOH
HOH
363
A
HOH
309
2
HOH
HOH
364
A
HOH
310
2
HOH
HOH
365
A
HOH
311
2
HOH
HOH
366
A
HOH
312
2
HOH
HOH
367
A
HOH
313
2
HOH
HOH
368
A
HOH
314
2
HOH
HOH
369
A
HOH
315
2
HOH
HOH
370
A
HOH
316
2
HOH
HOH
371
A
HOH
317
2
HOH
HOH
372
A
HOH
318
2
HOH
HOH
373
A
HOH
319
2
HOH
HOH
374
A
HOH
320
2
HOH
HOH
375
A
HOH
321
2
HOH
HOH
376
A
HOH
322
2
HOH
HOH
377
A
HOH
323
2
HOH
HOH
378
A
HOH
324
2
HOH
HOH
379
A
HOH
325
2
HOH
HOH
380
A
HOH
326
2
HOH
HOH
381
A
HOH
327
2
HOH
HOH
382
A
HOH
328
2
HOH
HOH
383
A
HOH
329
2
HOH
HOH
384
A
HOH
330
2
HOH
HOH
385
A
HOH
331
2
HOH
HOH
386
A
HOH
332
2
HOH
HOH
387
A
HOH
333
2
HOH
HOH
388
A
HOH
334
2
HOH
HOH
389
A
HOH
335
2
HOH
HOH
390
A
HOH
336
2
HOH
HOH
391
A
HOH
337
2
HOH
HOH
392
A
HOH
338
2
HOH
HOH
393
A
HOH
339
2
HOH
HOH
394
A
HOH
340
2
HOH
HOH
395
A
HOH
341
2
HOH
HOH
396
A
HOH
342
2
HOH
HOH
397
A
HOH
343
2
HOH
HOH
398
A
HOH
344
2
HOH
HOH
399
A
HOH
345
2
HOH
HOH
400
A
HOH
346
2
HOH
HOH
401
A
HOH
347
2
HOH
HOH
402
A
HOH
348
2
HOH
HOH
403
A
HOH
349
2
HOH
HOH
404
A
HOH
350
2
HOH
HOH
405
A
HOH
351
2
HOH
HOH
406
A
HOH
352
2
HOH
HOH
407
A
HOH
353
2
HOH
HOH
408
A
HOH
354
2
HOH
HOH
409
A
HOH
355
2
HOH
HOH
410
A
HOH
356
2
HOH
HOH
411
A
HOH
357
2
HOH
HOH
412
A
HOH
358
2
HOH
HOH
413
A
HOH
359
2
HOH
HOH
414
A
HOH
360
2
HOH
HOH
415
A
HOH
361
2
HOH
HOH
416
A
HOH
362
2
HOH
HOH
417
A
HOH
363
2
HOH
HOH
418
A
HOH
364
2
HOH
HOH
419
A
HOH
365
2
HOH
HOH
420
A
HOH
366
2
HOH
HOH
421
A
HOH
367
2
HOH
HOH
422
A
HOH
368
2
HOH
HOH
423
A
HOH
369
2
HOH
HOH
424
A
HOH
370
2
HOH
HOH
425
A
HOH
371
2
HOH
HOH
426
A
HOH
372
2
HOH
HOH
427
A
HOH
373
2
HOH
HOH
428
A
HOH
374
2
HOH
HOH
429
A
HOH
375
2
HOH
HOH
430
A
HOH
376
2
HOH
HOH
431
A
HOH
377
2
HOH
HOH
432
A
HOH
378
2
HOH
HOH
433
A
HOH
379
2
HOH
HOH
434
A
HOH
380
2
HOH
HOH
435
A
HOH
381
2
HOH
HOH
436
A
HOH
382
2
HOH
HOH
437
A
HOH
383
2
HOH
HOH
438
A
HOH
384
2
HOH
HOH
439
A
HOH
385
2
HOH
HOH
440
A
HOH
386
2
HOH
HOH
441
A
HOH
387
2
HOH
HOH
442
A
HOH
388
2
HOH
HOH
443
A
HOH
389
2
HOH
HOH
444
A
HOH
390
2
HOH
HOH
445
A
HOH
391
2
HOH
HOH
446
A
HOH
392
2
HOH
HOH
447
A
HOH
393
2
HOH
HOH
448
A
HOH
394
2
HOH
HOH
449
A
HOH
395
2
HOH
HOH
450
A
HOH
396
2
HOH
HOH
451
A
HOH
397
2
HOH
HOH
452
A
HOH
398
2
HOH
HOH
453
A
HOH
399
2
HOH
HOH
454
A
HOH
400
2
HOH
HOH
455
A
HOH
401
2
HOH
HOH
456
A
HOH
402
2
HOH
HOH
457
A
HOH
403
2
HOH
HOH
458
A
HOH
404
2
HOH
HOH
459
A
HOH
405
2
HOH
HOH
460
A
HOH
406
2
HOH
HOH
461
A
HOH
407
2
HOH
HOH
462
A
HOH
408
2
HOH
HOH
463
A
HOH
409
2
HOH
HOH
464
A
HOH
410
2
HOH
HOH
465
A
HOH
411
2
HOH
HOH
466
A
HOH
412
2
HOH
HOH
467
A
HOH
413
2
HOH
HOH
468
A
HOH
414
2
HOH
HOH
469
A
HOH
415
2
HOH
HOH
470
A
HOH
416
2
HOH
HOH
471
A
HOH
417
2
HOH
HOH
472
A
HOH
418
2
HOH
HOH
473
A
HOH
419
2
HOH
HOH
474
A
HOH
420
2
HOH
HOH
475
A
HOH
421
2
HOH
HOH
476
A
HOH
422
2
HOH
HOH
477
A
HOH
423
2
HOH
HOH
478
A
HOH
424
2
HOH
HOH
479
A
HOH
425
2
HOH
HOH
480
A
HOH
426
2
HOH
HOH
481
A
HOH
427
2
HOH
HOH
482
A
HOH
428
2
HOH
HOH
483
A
HOH
429
2
HOH
HOH
484
A
HOH
430
2
HOH
HOH
485
A
HOH
431
2
HOH
HOH
486
A
HOH
432
2
HOH
HOH
487
A
HOH
433
2
HOH
HOH
488
A
HOH
434
2
HOH
HOH
489
A
HOH
435
2
HOH
HOH
490
A
HOH
436
2
HOH
HOH
491
A
HOH
437
2
HOH
HOH
492
A
HOH
438
2
HOH
HOH
493
A
HOH
439
2
HOH
HOH
494
A
HOH
440
2
HOH
HOH
495
A
HOH
441
2
HOH
HOH
496
A
HOH
442
2
HOH
HOH
497
A
HOH
443
2
HOH
HOH
498
A
HOH
444
2
HOH
HOH
499
A
HOH
445
2
HOH
HOH
500
A
HOH
446
2
HOH
HOH
501
A
HOH
447
2
HOH
HOH
502
A
HOH
448
2
HOH
HOH
503
A
HOH
449
2
HOH
HOH
504
A
HOH
450
2
HOH
HOH
505
A
HOH
451
2
HOH
HOH
506
A
HOH
452
2
HOH
HOH
507
A
HOH
453
2
HOH
HOH
508
A
HOH
454
2
HOH
HOH
509
A
HOH
455
2
HOH
HOH
510
A
HOH
456
2
HOH
HOH
511
A
HOH
457
2
HOH
HOH
512
A
HOH
458
2
HOH
HOH
513
A
HOH
459
2
HOH
HOH
514
A
HOH
460
2
HOH
HOH
515
A
HOH
461
2
HOH
HOH
516
A
HOH
462
2
HOH
HOH
517
A
HOH
463
2
HOH
HOH
518
A
HOH
464
2
HOH
HOH
519
A
HOH
465
2
HOH
HOH
520
A
HOH
466
2
HOH
HOH
521
A
HOH
467
2
HOH
HOH
522
A
HOH
468
2
HOH
HOH
523
A
HOH
469
2
HOH
HOH
524
A
HOH
470
2
HOH
HOH
525
A
HOH
471
2
HOH
HOH
526
A
HOH
472
2
HOH
HOH
527
A
HOH
473
2
HOH
HOH
528
A
HOH
474
2
HOH
HOH
529
A
HOH
475
2
HOH
HOH
530
A
HOH
476
2
HOH
HOH
531
A
HOH
477
2
HOH
HOH
532
A
HOH
478
2
HOH
HOH
533
A
HOH
479
2
HOH
HOH
534
A
HOH
480
2
HOH
HOH
535
A
HOH
481
2
HOH
HOH
536
A
HOH
482
2
HOH
HOH
537
A
HOH
483
2
HOH
HOH
538
A
HOH
484
2
HOH
HOH
539
A
HOH
485
2
HOH
HOH
540
A
HOH
486
2
HOH
HOH
541
A
HOH
487
2
HOH
HOH
542
A
HOH
488
2
HOH
HOH
543
A
HOH
489
2
HOH
HOH
544
A
HOH
490
2
HOH
HOH
545
A
HOH
491
2
HOH
HOH
546
A
HOH
492
2
HOH
HOH
547
A
HOH
493
2
HOH
HOH
548
A
HOH
494
2
HOH
HOH
549
A
HOH
495
2
HOH
HOH
550
A
HOH
496
2
HOH
HOH
551
A
HOH
497
2
HOH
HOH
552
A
HOH
498
2
HOH
HOH
553
A
HOH
499
2
HOH
HOH
554
A
HOH
500
2
HOH
HOH
555
A
HOH
501
2
HOH
HOH
556
A
HOH
502
2
HOH
HOH
557
A
HOH
503
2
HOH
HOH
558
A
HOH
504
2
HOH
HOH
559
A
HOH
505
2
HOH
HOH
560
A
HOH
506
2
HOH
HOH
561
A
HOH
507
2
HOH
HOH
562
A
HOH
508
2
HOH
HOH
563
A
HOH
509
2
HOH
HOH
564
A
HOH
510
2
HOH
HOH
565
A
HOH
511
2
HOH
HOH
566
A
HOH
512
2
HOH
HOH
567
A
HOH
513
2
HOH
HOH
568
A
HOH
514
2
HOH
HOH
569
A
HOH
515
2
HOH
HOH
570
A
HOH
516
2
HOH
HOH
571
A
HOH
517
2
HOH
HOH
572
A
HOH
518
2
HOH
HOH
573
A
HOH
519
2
HOH
HOH
574
A
HOH
520
2
HOH
HOH
575
A
HOH
521
2
HOH
HOH
576
A
HOH
522
2
HOH
HOH
577
A
HOH
523
2
HOH
HOH
578
A
HOH
524
2
HOH
HOH
579
A
HOH
525
2
HOH
HOH
580
A
HOH
526
2
HOH
HOH
581
A
HOH
527
2
HOH
HOH
582
A
HOH
528
2
HOH
HOH
583
A
HOH
529
2
HOH
HOH
584
A
HOH
530
2
HOH
HOH
585
A
HOH
531
2
HOH
HOH
586
A
HOH
532
2
HOH
HOH
587
A
HOH
533
2
HOH
HOH
588
A
HOH
534
2
HOH
HOH
589
A
HOH
535
2
HOH
HOH
590
A
HOH
536
2
HOH
HOH
591
A
n
1
52
A
n
2
53
A
ALA
54
n
3
HIS
54
A
MET
55
n
4
MET
55
A
SER
56
n
5
SER
56
A
LYS
57
n
6
LYS
57
A
THR
58
n
7
THR
58
A
LEU
59
n
8
LEU
59
A
GLN
60
n
9
GLN
60
A
ARG
61
n
10
ARG
61
A
ASN
62
n
11
ASN
62
A
ARG
63
n
12
ARG
63
A
LYS
64
n
13
LYS
64
A
MET
65
n
14
MET
65
A
ALA
66
n
15
ALA
66
A
MET
67
n
16
MET
67
A
GLY
68
n
17
GLY
68
A
ARG
69
n
18
ARG
69
A
LYS
70
n
19
LYS
70
A
LYS
71
n
20
LYS
71
A
PHE
72
n
21
PHE
72
A
ASN
73
n
22
ASN
73
A
MET
74
n
23
MET
74
A
ASP
75
n
24
ASP
75
A
PRO
76
n
25
PRO
76
A
LYS
77
n
26
LYS
77
A
LYS
78
n
27
LYS
78
A
GLY
79
n
28
GLY
79
A
ILE
80
n
29
ILE
80
A
GLN
81
n
30
GLN
81
A
PHE
82
n
31
PHE
82
A
LEU
83
n
32
LEU
83
A
VAL
84
n
33
VAL
84
A
GLU
85
n
34
GLU
85
A
ASN
86
n
35
ASN
86
A
GLU
87
n
36
GLU
87
A
LEU
88
n
37
LEU
88
A
LEU
89
n
38
LEU
89
A
GLN
90
n
39
GLN
90
A
ASN
91
n
40
ASN
91
A
THR
92
n
41
THR
92
A
PRO
93
n
42
PRO
93
A
GLU
94
n
43
GLU
94
A
GLU
95
n
44
GLU
95
A
ILE
96
n
45
ILE
96
A
ALA
97
n
46
ALA
97
A
ARG
98
n
47
ARG
98
A
PHE
99
n
48
PHE
99
A
LEU
100
n
49
LEU
100
A
TYR
101
n
50
TYR
101
A
LYS
102
n
51
LYS
102
A
GLY
103
n
52
GLY
103
A
GLU
104
n
53
GLU
104
A
GLY
105
n
54
GLY
105
A
LEU
106
n
55
LEU
106
A
ASN
107
n
56
ASN
107
A
LYS
108
n
57
LYS
108
A
THR
109
n
58
THR
109
A
ALA
110
n
59
ALA
110
A
ILE
111
n
60
ILE
111
A
GLY
112
n
61
GLY
112
A
ASP
113
n
62
ASP
113
A
TYR
114
n
63
TYR
114
A
LEU
115
n
64
LEU
115
A
GLY
116
n
65
GLY
116
A
GLU
117
n
66
GLU
117
A
ARG
118
n
67
ARG
118
A
GLU
119
n
68
GLU
119
A
GLU
120
n
69
GLU
120
A
LEU
121
n
70
LEU
121
A
ASN
122
n
71
ASN
122
A
LEU
123
n
72
LEU
123
A
ALA
124
n
73
ALA
124
A
VAL
125
n
74
VAL
125
A
LEU
126
n
75
LEU
126
A
HIS
127
n
76
HIS
127
A
ALA
128
n
77
ALA
128
A
PHE
129
n
78
PHE
129
A
VAL
130
n
79
VAL
130
A
ASP
131
n
80
ASP
131
A
LEU
132
n
81
LEU
132
A
HIS
133
n
82
HIS
133
A
GLU
134
n
83
GLU
134
A
PHE
135
n
84
PHE
135
A
THR
136
n
85
THR
136
A
ASP
137
n
86
ASP
137
A
LEU
138
n
87
LEU
138
A
ASN
139
n
88
ASN
139
A
LEU
140
n
89
LEU
140
A
VAL
141
n
90
VAL
141
A
GLN
142
n
91
GLN
142
A
ALA
143
n
92
ALA
143
A
LEU
144
n
93
LEU
144
A
ARG
145
n
94
ARG
145
A
GLN
146
n
95
GLN
146
A
PHE
147
n
96
PHE
147
A
LEU
148
n
97
LEU
148
A
TRP
149
n
98
TRP
149
A
SER
150
n
99
SER
150
A
PHE
151
n
100
PHE
151
A
ARG
152
n
101
ARG
152
A
LEU
153
n
102
LEU
153
A
PRO
154
n
103
PRO
154
A
GLY
155
n
104
GLY
155
A
GLU
156
n
105
GLU
156
A
ALA
157
n
106
ALA
157
A
GLN
158
n
107
GLN
158
A
LYS
159
n
108
LYS
159
A
ILE
160
n
109
ILE
160
A
ASP
161
n
110
ASP
161
A
ARG
162
n
111
ARG
162
A
MET
163
n
112
MET
163
A
MET
164
n
113
MET
164
A
GLU
165
n
114
GLU
165
A
ALA
166
n
115
ALA
166
A
PHE
167
n
116
PHE
167
A
ALA
168
n
117
ALA
168
A
GLN
169
n
118
GLN
169
A
ARG
170
n
119
ARG
170
A
TYR
171
n
120
TYR
171
A
CYS
172
n
121
CYS
172
A
LEU
173
n
122
LEU
173
A
CYS
174
n
123
CYS
174
A
ASN
175
n
124
ASN
175
A
PRO
176
n
125
PRO
176
A
GLY
177
n
126
GLY
177
A
VAL
178
n
127
VAL
178
A
PHE
179
n
128
PHE
179
A
GLN
180
n
129
GLN
180
A
SER
181
n
130
SER
181
A
THR
182
n
131
THR
182
A
ASP
183
n
132
ASP
183
A
THR
184
n
133
THR
184
A
CYS
185
n
134
CYS
185
A
TYR
186
n
135
TYR
186
A
VAL
187
n
136
VAL
187
A
LEU
188
n
137
LEU
188
A
SER
189
n
138
SER
189
A
PHE
190
n
139
PHE
190
A
ALA
191
n
140
ALA
191
A
VAL
192
n
141
VAL
192
A
ILE
193
n
142
ILE
193
A
MET
194
n
143
MET
194
A
LEU
195
n
144
LEU
195
A
ASN
196
n
145
ASN
196
A
THR
197
n
146
THR
197
A
SER
198
n
147
SER
198
A
LEU
199
n
148
LEU
199
A
HIS
200
n
149
HIS
200
A
ASN
201
n
150
ASN
201
A
PRO
202
n
151
PRO
202
A
ASN
203
n
152
ASN
203
A
VAL
204
n
153
VAL
204
A
ARG
205
n
154
ARG
205
A
ASP
206
n
155
ASP
206
A
LYS
207
n
156
LYS
207
A
PRO
208
n
157
PRO
208
A
GLY
209
n
158
GLY
209
A
LEU
210
n
159
LEU
210
A
GLU
211
n
160
GLU
211
A
ARG
212
n
161
ARG
212
A
PHE
213
n
162
PHE
213
A
VAL
214
n
163
VAL
214
A
ALA
215
n
164
ALA
215
A
MET
216
n
165
MET
216
A
ASN
217
n
166
ASN
217
A
ARG
218
n
167
ARG
218
A
GLY
219
n
168
GLY
219
A
ILE
220
n
169
ILE
220
A
ASN
221
n
170
ASN
221
A
GLU
222
n
171
GLU
222
A
GLY
223
n
172
GLY
223
A
GLY
224
n
173
GLY
224
A
ASP
225
n
174
ASP
225
A
LEU
226
n
175
LEU
226
A
PRO
227
n
176
PRO
227
A
GLU
228
n
177
GLU
228
A
GLU
229
n
178
GLU
229
A
LEU
230
n
179
LEU
230
A
LEU
231
n
180
LEU
231
A
ARG
232
n
181
ARG
232
A
ASN
233
n
182
ASN
233
A
LEU
234
n
183
LEU
234
A
TYR
235
n
184
TYR
235
A
ASP
236
n
185
ASP
236
A
SER
237
n
186
SER
237
A
ILE
238
n
187
ILE
238
A
ARG
239
n
188
ARG
239
A
ASN
240
n
189
ASN
240
A
GLU
241
n
190
GLU
241
A
PRO
242
n
191
PRO
242
A
PHE
243
n
192
PHE
243
A
LYS
244
n
193
LYS
244
A
GLY
245
n
194
ILE
245
A
n
195
246
A
n
196
247
A
n
197
248
A
n
198
249
A
n
199
250
A
n
200
251
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
HIS
54
A
CG
HIS
3
1
Y
1
A
ND1
HIS
54
A
ND1
HIS
3
1
Y
1
A
CD2
HIS
54
A
CD2
HIS
3
1
Y
1
A
CE1
HIS
54
A
CE1
HIS
3
1
Y
1
A
NE2
HIS
54
A
NE2
HIS
3
1
Y
1
A
CB
ILE
245
A
CB
ILE
194
1
Y
1
A
CG1
ILE
245
A
CG1
ILE
194
1
Y
1
A
CG2
ILE
245
A
CG2
ILE
194
1
Y
1
A
CD1
ILE
245
A
CD1
ILE
194
1
Y
1
A
GLY
52
A
GLY
1
1
Y
1
A
SER
53
A
SER
2
1
Y
1
A
PRO
246
A
PRO
195
1
Y
1
A
GLU
247
A
GLU
196
1
Y
1
A
ASP
248
A
ASP
197
1
Y
1
A
ASP
249
A
ASP
198
1
Y
1
A
GLY
250
A
GLY
199
1
Y
1
A
ASN
251
A
ASN
200
1
Y
1
A
A
O
O
HOH
HOH
423
473
1.80
1
A
A
NE2
O
GLN
HOH
146
579
2.17
1
A
A
CD
OE2
GLU
GLU
211
211
-0.078
0.011
1.252
1.174
N
21.079
0.00
0.00
0.00
0.00
0.00
0.00
0.973
0.964
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.16616
0.13287
0.13459
1.50
44.77
1927
36594
5.0
99.99
1.661
0.029
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.062
0.057
0.80
0.80
1.20
1PBV
MAXIMUM LIKELIHOOD
MASK
1.50
44.77
291
1842
0
0
1551
0.007
0.019
1580
0.001
0.020
1533
1.115
1.971
2125
0.747
3.000
3515
4.762
5.000
191
37.618
24.096
83
11.200
15.000
292
14.182
15.000
14
0.065
0.200
227
0.005
0.021
1805
0.001
0.020
383
1.358
1.695
767
1.359
1.691
766
1.677
2.547
957
2.208
2.111
813
1.735
3.000
3113
27.881
5.000
66
8.091
5.000
3309
0.176
0.110
1.539
120
2692
20
100.00
1.5
44.77
4JMI
38574
38574
1
1
1
100
0.342
1.50
1.58
1
100
data collection
DNA
phasing
PHASER
refinement
REFMAC
5.7.0032
data reduction
MOSFLM
data scaling
SCALA
Sec7 domain of ARNO, an exchange factor, at 1.5 Angstrom resolution
1
N
N
2
N
N
A
HIS
54
A
HIS
3
HELX_P
A
ASP
75
A
ASP
24
1
1
22
A
ASP
75
A
ASP
24
HELX_P
A
ASN
86
A
ASN
35
1
2
12
A
THR
92
A
THR
41
HELX_P
A
GLY
103
A
GLY
52
1
3
12
A
ASN
107
A
ASN
56
HELX_P
A
GLY
116
A
GLY
65
1
4
10
A
GLU
119
A
GLU
68
HELX_P
A
LEU
132
A
LEU
81
1
5
14
A
ASN
139
A
ASN
88
HELX_P
A
PHE
151
A
PHE
100
1
6
13
A
GLU
156
A
GLU
105
HELX_P
A
ASN
175
A
ASN
124
1
7
20
A
SER
181
A
SER
130
HELX_P
A
ASN
201
A
ASN
150
1
8
21
A
GLY
209
A
GLY
158
HELX_P
A
ASN
217
A
ASN
166
1
9
9
A
PRO
227
A
PRO
176
HELX_P
A
GLU
241
A
GLU
190
1
10
15
SIGNALING PROTEIN
Nucleotide Exchange Factors, Arf1, SIGNALING PROTEIN
CYH2_HUMAN
UNP
1
56
Q99418
SKTLQRNRKMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLAVLHAFVDLHEF
TDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFQSTDTCYVLSFAVIMLNTSLHNPNVRDKPGLERFVA
MNRGINEGGDLPEELLRNLYDSIRNEPFKIPEDDGN
56
251
4JMI
56
251
Q99418
A
1
5
200
1
expression tag
GLY
52
4JMI
A
Q99418
UNP
1
1
expression tag
SER
53
4JMI
A
Q99418
UNP
2
1
expression tag
HIS
54
4JMI
A
Q99418
UNP
3
1
expression tag
MET
55
4JMI
A
Q99418
UNP
4
198
P 21 3