0.009392
0.000000
0.000000
0.000000
0.013408
0.000000
0.000000
0.000000
0.019493
0.000000
0.000000
0.000000
Barelier, S.
Fischer, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
106.470
74.580
51.300
C8 H8 N2 O
148.162
1H-pyrrolo[3,2-b]pyridin-6-ylmethanol
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
N
Y
4
N
C
Y
5
N
C
Y
6
N
N
Y
7
N
C
Y
8
N
C
Y
9
N
C
N
10
N
C
N
11
N
O
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
N
N
21
S
C
N
22
N
C
N
23
N
O
N
24
N
C
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
N
N
34
S
C
N
35
N
C
N
36
N
O
N
37
N
C
N
38
N
C
N
39
N
C
N
40
N
N
N
41
N
C
N
42
N
N
N
43
N
N
N
44
N
O
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
N
N
61
S
C
N
62
N
C
N
63
N
O
N
64
N
C
N
65
N
C
N
66
N
O
N
67
N
N
N
68
N
O
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
N
N
78
S
C
N
79
N
C
N
80
N
O
N
81
N
C
N
82
N
C
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
N
N
94
R
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
S
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
S
C
N
109
N
C
N
110
N
O
N
111
N
C
N
112
N
C
N
113
N
C
N
114
N
O
N
115
N
N
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
O
N
136
N
O
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
C
Y
160
N
C
Y
161
N
C
Y
162
N
C
Y
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
C
N
168
N
O
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
Y
177
N
C
Y
178
N
C
Y
179
N
C
Y
180
N
C
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
O
Y
194
N
N
N
195
N
N
Y
196
N
N
N
197
N
N
N
198
N
FE
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
Y
236
N
C
Y
237
N
N
Y
238
N
C
Y
239
N
C
Y
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
S
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
N
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
S
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
N
372
N
C
N
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
R
C
N
403
N
O
N
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
N
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
N
471
N
C
N
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
1
N
sing
N
2
N
sing
Y
3
N
doub
Y
4
N
sing
Y
5
N
sing
Y
6
N
doub
Y
7
N
doub
Y
8
N
sing
Y
9
N
sing
Y
10
N
sing
Y
11
N
doub
Y
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
doub
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
doub
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
Y
161
N
doub
Y
162
N
sing
Y
163
N
sing
N
164
N
sing
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
Y
193
N
sing
Y
194
N
sing
Y
195
N
doub
N
196
N
sing
Y
197
N
sing
N
198
N
sing
Y
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
doub
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
Y
242
N
sing
Y
243
N
doub
Y
244
N
doub
N
245
N
sing
Y
246
N
sing
N
247
N
sing
Y
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
Y
419
N
doub
Y
420
N
sing
Y
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
Y
447
N
doub
Y
448
N
sing
Y
449
N
sing
N
450
N
sing
Y
451
N
doub
N
452
N
sing
Y
453
N
doub
N
454
N
sing
Y
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
To be published
0353
Docking to a water-filled model binding site in Cytochrome c Peroxidase
10.2210/pdb4jmt/pdb
pdb_00004jmt
80
1
CCD
2011-10-07
ADSC QUANTUM 315r
Double flat crystal, Si(111)
SINGLE WAVELENGTH
M
x-ray
1
1.115869
1.0
8.3.1
ALS
1.115869
SYNCHROTRON
ALS BEAMLINE 8.3.1
32928.582
Cytochrome c peroxidase
1.11.1.5
RESIDUES 72-362, DELETIONS G192-A193
P190G, W191G
1
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
148.162
1H-pyrrolo[3,2-b]pyridin-6-ylmethanol
1
syn
non-polymer
18.015
water
439
nat
water
no
no
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL
SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL
SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
RM11-1a
sample
CCP1 CCP CPO YKR066C, SCRG_04081
285006
Saccharomyces cerevisiae
469008
Escherichia coli
BL21(DE3)
1
3.09
60.23
VAPOR DIFFUSION, SITTING DROP
6
Apo crystal grown in 100mM KPi, pH 6.0. Soaked into 100mM ZINC14401114 in 25% MPD (1h), vapor diffusion, sitting drop, temperature 283K, VAPOR DIFFUSION, SITTING DROP
283
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Data collection
Database references
Derived calculations
1
0
2013-05-01
1
1
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-03-14
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
1LZ
1H-pyrrolo[3,2-b]pyridin-6-ylmethanol
HOH
water
HEM
300
2
HEM
HEM
301
A
1LZ
1
3
1LZ
1LZ
302
A
HOH
1
4
HOH
HOH
401
A
HOH
3
4
HOH
HOH
402
A
HOH
4
4
HOH
HOH
403
A
HOH
5
4
HOH
HOH
404
A
HOH
6
4
HOH
HOH
405
A
HOH
7
4
HOH
HOH
406
A
HOH
8
4
HOH
HOH
407
A
HOH
9
4
HOH
HOH
408
A
HOH
10
4
HOH
HOH
409
A
HOH
12
4
HOH
HOH
410
A
HOH
14
4
HOH
HOH
411
A
HOH
15
4
HOH
HOH
412
A
HOH
16
4
HOH
HOH
413
A
HOH
17
4
HOH
HOH
414
A
HOH
18
4
HOH
HOH
415
A
HOH
19
4
HOH
HOH
416
A
HOH
20
4
HOH
HOH
417
A
HOH
21
4
HOH
HOH
418
A
HOH
23
4
HOH
HOH
419
A
HOH
24
4
HOH
HOH
420
A
HOH
26
4
HOH
HOH
421
A
HOH
27
4
HOH
HOH
422
A
HOH
28
4
HOH
HOH
423
A
HOH
29
4
HOH
HOH
424
A
HOH
30
4
HOH
HOH
425
A
HOH
32
4
HOH
HOH
426
A
HOH
33
4
HOH
HOH
427
A
HOH
34
4
HOH
HOH
428
A
HOH
35
4
HOH
HOH
429
A
HOH
36
4
HOH
HOH
430
A
HOH
38
4
HOH
HOH
431
A
HOH
39
4
HOH
HOH
432
A
HOH
40
4
HOH
HOH
433
A
HOH
41
4
HOH
HOH
434
A
HOH
43
4
HOH
HOH
435
A
HOH
44
4
HOH
HOH
436
A
HOH
45
4
HOH
HOH
437
A
HOH
46
4
HOH
HOH
438
A
HOH
47
4
HOH
HOH
439
A
HOH
49
4
HOH
HOH
440
A
HOH
50
4
HOH
HOH
441
A
HOH
51
4
HOH
HOH
442
A
HOH
52
4
HOH
HOH
443
A
HOH
53
4
HOH
HOH
444
A
HOH
54
4
HOH
HOH
445
A
HOH
55
4
HOH
HOH
446
A
HOH
56
4
HOH
HOH
447
A
HOH
57
4
HOH
HOH
448
A
HOH
58
4
HOH
HOH
449
A
HOH
59
4
HOH
HOH
450
A
HOH
60
4
HOH
HOH
451
A
HOH
61
4
HOH
HOH
452
A
HOH
62
4
HOH
HOH
453
A
HOH
63
4
HOH
HOH
454
A
HOH
64
4
HOH
HOH
455
A
HOH
65
4
HOH
HOH
456
A
HOH
66
4
HOH
HOH
457
A
HOH
67
4
HOH
HOH
458
A
HOH
68
4
HOH
HOH
459
A
HOH
69
4
HOH
HOH
460
A
HOH
70
4
HOH
HOH
461
A
HOH
71
4
HOH
HOH
462
A
HOH
72
4
HOH
HOH
463
A
HOH
73
4
HOH
HOH
464
A
HOH
74
4
HOH
HOH
465
A
HOH
75
4
HOH
HOH
466
A
HOH
76
4
HOH
HOH
467
A
HOH
77
4
HOH
HOH
468
A
HOH
78
4
HOH
HOH
469
A
HOH
79
4
HOH
HOH
470
A
HOH
80
4
HOH
HOH
471
A
HOH
81
4
HOH
HOH
472
A
HOH
83
4
HOH
HOH
473
A
HOH
84
4
HOH
HOH
474
A
HOH
85
4
HOH
HOH
475
A
HOH
86
4
HOH
HOH
476
A
HOH
87
4
HOH
HOH
477
A
HOH
89
4
HOH
HOH
478
A
HOH
90
4
HOH
HOH
479
A
HOH
91
4
HOH
HOH
480
A
HOH
92
4
HOH
HOH
481
A
HOH
93
4
HOH
HOH
482
A
HOH
94
4
HOH
HOH
483
A
HOH
95
4
HOH
HOH
484
A
HOH
96
4
HOH
HOH
485
A
HOH
97
4
HOH
HOH
486
A
HOH
98
4
HOH
HOH
487
A
HOH
99
4
HOH
HOH
488
A
HOH
101
4
HOH
HOH
489
A
HOH
102
4
HOH
HOH
490
A
HOH
103
4
HOH
HOH
491
A
HOH
104
4
HOH
HOH
492
A
HOH
105
4
HOH
HOH
493
A
HOH
106
4
HOH
HOH
494
A
HOH
107
4
HOH
HOH
495
A
HOH
108
4
HOH
HOH
496
A
HOH
109
4
HOH
HOH
497
A
HOH
110
4
HOH
HOH
498
A
HOH
111
4
HOH
HOH
499
A
HOH
112
4
HOH
HOH
500
A
HOH
113
4
HOH
HOH
501
A
HOH
114
4
HOH
HOH
502
A
HOH
115
4
HOH
HOH
503
A
HOH
116
4
HOH
HOH
504
A
HOH
117
4
HOH
HOH
505
A
HOH
119
4
HOH
HOH
506
A
HOH
120
4
HOH
HOH
507
A
HOH
121
4
HOH
HOH
508
A
HOH
122
4
HOH
HOH
509
A
HOH
123
4
HOH
HOH
510
A
HOH
124
4
HOH
HOH
511
A
HOH
125
4
HOH
HOH
512
A
HOH
126
4
HOH
HOH
513
A
HOH
127
4
HOH
HOH
514
A
HOH
128
4
HOH
HOH
515
A
HOH
129
4
HOH
HOH
516
A
HOH
130
4
HOH
HOH
517
A
HOH
131
4
HOH
HOH
518
A
HOH
134
4
HOH
HOH
519
A
HOH
136
4
HOH
HOH
520
A
HOH
138
4
HOH
HOH
521
A
HOH
139
4
HOH
HOH
522
A
HOH
140
4
HOH
HOH
523
A
HOH
141
4
HOH
HOH
524
A
HOH
142
4
HOH
HOH
525
A
HOH
143
4
HOH
HOH
526
A
HOH
145
4
HOH
HOH
527
A
HOH
146
4
HOH
HOH
528
A
HOH
147
4
HOH
HOH
529
A
HOH
148
4
HOH
HOH
530
A
HOH
150
4
HOH
HOH
531
A
HOH
151
4
HOH
HOH
532
A
HOH
152
4
HOH
HOH
533
A
HOH
153
4
HOH
HOH
534
A
HOH
154
4
HOH
HOH
535
A
HOH
155
4
HOH
HOH
536
A
HOH
156
4
HOH
HOH
537
A
HOH
157
4
HOH
HOH
538
A
HOH
158
4
HOH
HOH
539
A
HOH
159
4
HOH
HOH
540
A
HOH
160
4
HOH
HOH
541
A
HOH
161
4
HOH
HOH
542
A
HOH
162
4
HOH
HOH
543
A
HOH
163
4
HOH
HOH
544
A
HOH
164
4
HOH
HOH
545
A
HOH
165
4
HOH
HOH
546
A
HOH
170
4
HOH
HOH
547
A
HOH
171
4
HOH
HOH
548
A
HOH
172
4
HOH
HOH
549
A
HOH
174
4
HOH
HOH
550
A
HOH
176
4
HOH
HOH
551
A
HOH
177
4
HOH
HOH
552
A
HOH
179
4
HOH
HOH
553
A
HOH
180
4
HOH
HOH
554
A
HOH
181
4
HOH
HOH
555
A
HOH
182
4
HOH
HOH
556
A
HOH
183
4
HOH
HOH
557
A
HOH
184
4
HOH
HOH
558
A
HOH
187
4
HOH
HOH
559
A
HOH
188
4
HOH
HOH
560
A
HOH
190
4
HOH
HOH
561
A
HOH
191
4
HOH
HOH
562
A
HOH
192
4
HOH
HOH
563
A
HOH
194
4
HOH
HOH
564
A
HOH
195
4
HOH
HOH
565
A
HOH
196
4
HOH
HOH
566
A
HOH
197
4
HOH
HOH
567
A
HOH
198
4
HOH
HOH
568
A
HOH
199
4
HOH
HOH
569
A
HOH
200
4
HOH
HOH
570
A
HOH
201
4
HOH
HOH
571
A
HOH
202
4
HOH
HOH
572
A
HOH
203
4
HOH
HOH
573
A
HOH
204
4
HOH
HOH
574
A
HOH
205
4
HOH
HOH
575
A
HOH
206
4
HOH
HOH
576
A
HOH
207
4
HOH
HOH
577
A
HOH
208
4
HOH
HOH
578
A
HOH
209
4
HOH
HOH
579
A
HOH
210
4
HOH
HOH
580
A
HOH
211
4
HOH
HOH
581
A
HOH
212
4
HOH
HOH
582
A
HOH
213
4
HOH
HOH
583
A
HOH
214
4
HOH
HOH
584
A
HOH
215
4
HOH
HOH
585
A
HOH
217
4
HOH
HOH
586
A
HOH
220
4
HOH
HOH
587
A
HOH
221
4
HOH
HOH
588
A
HOH
222
4
HOH
HOH
589
A
HOH
223
4
HOH
HOH
590
A
HOH
225
4
HOH
HOH
591
A
HOH
226
4
HOH
HOH
592
A
HOH
227
4
HOH
HOH
593
A
HOH
228
4
HOH
HOH
594
A
HOH
229
4
HOH
HOH
595
A
HOH
230
4
HOH
HOH
596
A
HOH
231
4
HOH
HOH
597
A
HOH
232
4
HOH
HOH
598
A
HOH
233
4
HOH
HOH
599
A
HOH
236
4
HOH
HOH
600
A
HOH
237
4
HOH
HOH
601
A
HOH
238
4
HOH
HOH
602
A
HOH
240
4
HOH
HOH
603
A
HOH
242
4
HOH
HOH
604
A
HOH
243
4
HOH
HOH
605
A
HOH
244
4
HOH
HOH
606
A
HOH
246
4
HOH
HOH
607
A
HOH
247
4
HOH
HOH
608
A
HOH
249
4
HOH
HOH
609
A
HOH
250
4
HOH
HOH
610
A
HOH
251
4
HOH
HOH
611
A
HOH
253
4
HOH
HOH
612
A
HOH
254
4
HOH
HOH
613
A
HOH
256
4
HOH
HOH
614
A
HOH
257
4
HOH
HOH
615
A
HOH
259
4
HOH
HOH
616
A
HOH
260
4
HOH
HOH
617
A
HOH
261
4
HOH
HOH
618
A
HOH
262
4
HOH
HOH
619
A
HOH
263
4
HOH
HOH
620
A
HOH
264
4
HOH
HOH
621
A
HOH
267
4
HOH
HOH
622
A
HOH
268
4
HOH
HOH
623
A
HOH
269
4
HOH
HOH
624
A
HOH
272
4
HOH
HOH
625
A
HOH
273
4
HOH
HOH
626
A
HOH
274
4
HOH
HOH
627
A
HOH
277
4
HOH
HOH
628
A
HOH
278
4
HOH
HOH
629
A
HOH
281
4
HOH
HOH
630
A
HOH
285
4
HOH
HOH
631
A
HOH
286
4
HOH
HOH
632
A
HOH
294
4
HOH
HOH
633
A
HOH
295
4
HOH
HOH
634
A
HOH
296
4
HOH
HOH
635
A
HOH
298
4
HOH
HOH
636
A
HOH
299
4
HOH
HOH
637
A
HOH
302
4
HOH
HOH
638
A
HOH
306
4
HOH
HOH
639
A
HOH
307
4
HOH
HOH
640
A
HOH
309
4
HOH
HOH
641
A
HOH
310
4
HOH
HOH
642
A
HOH
317
4
HOH
HOH
643
A
HOH
323
4
HOH
HOH
644
A
HOH
325
4
HOH
HOH
645
A
HOH
328
4
HOH
HOH
646
A
HOH
330
4
HOH
HOH
647
A
HOH
332
4
HOH
HOH
648
A
HOH
333
4
HOH
HOH
649
A
HOH
361
4
HOH
HOH
650
A
HOH
362
4
HOH
HOH
651
A
HOH
387
4
HOH
HOH
652
A
HOH
390
4
HOH
HOH
653
A
HOH
392
4
HOH
HOH
654
A
HOH
393
4
HOH
HOH
655
A
HOH
394
4
HOH
HOH
656
A
HOH
395
4
HOH
HOH
657
A
HOH
396
4
HOH
HOH
658
A
HOH
397
4
HOH
HOH
659
A
HOH
399
4
HOH
HOH
660
A
HOH
403
4
HOH
HOH
661
A
HOH
416
4
HOH
HOH
662
A
HOH
419
4
HOH
HOH
663
A
HOH
420
4
HOH
HOH
664
A
HOH
421
4
HOH
HOH
665
A
HOH
422
4
HOH
HOH
666
A
HOH
423
4
HOH
HOH
667
A
HOH
424
4
HOH
HOH
668
A
HOH
425
4
HOH
HOH
669
A
HOH
427
4
HOH
HOH
670
A
HOH
429
4
HOH
HOH
671
A
HOH
430
4
HOH
HOH
672
A
HOH
431
4
HOH
HOH
673
A
HOH
433
4
HOH
HOH
674
A
HOH
434
4
HOH
HOH
675
A
HOH
435
4
HOH
HOH
676
A
HOH
436
4
HOH
HOH
677
A
HOH
437
4
HOH
HOH
678
A
HOH
440
4
HOH
HOH
679
A
HOH
441
4
HOH
HOH
680
A
HOH
442
4
HOH
HOH
681
A
HOH
443
4
HOH
HOH
682
A
HOH
444
4
HOH
HOH
683
A
HOH
446
4
HOH
HOH
684
A
HOH
448
4
HOH
HOH
685
A
HOH
449
4
HOH
HOH
686
A
HOH
450
4
HOH
HOH
687
A
HOH
451
4
HOH
HOH
688
A
HOH
454
4
HOH
HOH
689
A
HOH
455
4
HOH
HOH
690
A
HOH
456
4
HOH
HOH
691
A
HOH
457
4
HOH
HOH
692
A
HOH
458
4
HOH
HOH
693
A
HOH
460
4
HOH
HOH
694
A
HOH
461
4
HOH
HOH
695
A
HOH
468
4
HOH
HOH
696
A
HOH
470
4
HOH
HOH
697
A
HOH
471
4
HOH
HOH
698
A
HOH
472
4
HOH
HOH
699
A
HOH
473
4
HOH
HOH
700
A
HOH
475
4
HOH
HOH
701
A
HOH
476
4
HOH
HOH
702
A
HOH
477
4
HOH
HOH
703
A
HOH
478
4
HOH
HOH
704
A
HOH
479
4
HOH
HOH
705
A
HOH
480
4
HOH
HOH
706
A
HOH
485
4
HOH
HOH
707
A
HOH
492
4
HOH
HOH
708
A
HOH
494
4
HOH
HOH
709
A
HOH
495
4
HOH
HOH
710
A
HOH
496
4
HOH
HOH
711
A
HOH
497
4
HOH
HOH
712
A
HOH
498
4
HOH
HOH
713
A
HOH
499
4
HOH
HOH
714
A
HOH
500
4
HOH
HOH
715
A
HOH
501
4
HOH
HOH
716
A
HOH
502
4
HOH
HOH
717
A
HOH
504
4
HOH
HOH
718
A
HOH
505
4
HOH
HOH
719
A
HOH
506
4
HOH
HOH
720
A
HOH
507
4
HOH
HOH
721
A
HOH
508
4
HOH
HOH
722
A
HOH
509
4
HOH
HOH
723
A
HOH
511
4
HOH
HOH
724
A
HOH
512
4
HOH
HOH
725
A
HOH
513
4
HOH
HOH
726
A
HOH
516
4
HOH
HOH
727
A
HOH
518
4
HOH
HOH
728
A
HOH
519
4
HOH
HOH
729
A
HOH
520
4
HOH
HOH
730
A
HOH
523
4
HOH
HOH
731
A
HOH
525
4
HOH
HOH
732
A
HOH
527
4
HOH
HOH
733
A
HOH
528
4
HOH
HOH
734
A
HOH
529
4
HOH
HOH
735
A
HOH
530
4
HOH
HOH
736
A
HOH
533
4
HOH
HOH
737
A
HOH
536
4
HOH
HOH
738
A
HOH
537
4
HOH
HOH
739
A
HOH
539
4
HOH
HOH
740
A
HOH
543
4
HOH
HOH
741
A
HOH
545
4
HOH
HOH
742
A
HOH
551
4
HOH
HOH
743
A
HOH
560
4
HOH
HOH
744
A
HOH
565
4
HOH
HOH
745
A
HOH
566
4
HOH
HOH
746
A
HOH
567
4
HOH
HOH
747
A
HOH
569
4
HOH
HOH
748
A
HOH
574
4
HOH
HOH
749
A
HOH
575
4
HOH
HOH
750
A
HOH
580
4
HOH
HOH
751
A
HOH
581
4
HOH
HOH
752
A
HOH
582
4
HOH
HOH
753
A
HOH
583
4
HOH
HOH
754
A
HOH
584
4
HOH
HOH
755
A
HOH
585
4
HOH
HOH
756
A
HOH
586
4
HOH
HOH
757
A
HOH
587
4
HOH
HOH
758
A
HOH
588
4
HOH
HOH
759
A
HOH
589
4
HOH
HOH
760
A
HOH
590
4
HOH
HOH
761
A
HOH
591
4
HOH
HOH
762
A
HOH
592
4
HOH
HOH
763
A
HOH
593
4
HOH
HOH
764
A
HOH
594
4
HOH
HOH
765
A
HOH
595
4
HOH
HOH
766
A
HOH
596
4
HOH
HOH
767
A
HOH
597
4
HOH
HOH
768
A
HOH
598
4
HOH
HOH
769
A
HOH
599
4
HOH
HOH
770
A
HOH
600
4
HOH
HOH
771
A
HOH
601
4
HOH
HOH
772
A
HOH
602
4
HOH
HOH
773
A
HOH
603
4
HOH
HOH
774
A
HOH
604
4
HOH
HOH
775
A
HOH
605
4
HOH
HOH
776
A
HOH
606
4
HOH
HOH
777
A
HOH
608
4
HOH
HOH
778
A
HOH
610
4
HOH
HOH
779
A
HOH
612
4
HOH
HOH
780
A
HOH
613
4
HOH
HOH
781
A
HOH
614
4
HOH
HOH
782
A
HOH
615
4
HOH
HOH
783
A
HOH
616
4
HOH
HOH
784
A
HOH
617
4
HOH
HOH
785
A
HOH
618
4
HOH
HOH
786
A
HOH
619
4
HOH
HOH
787
A
HOH
620
4
HOH
HOH
788
A
HOH
621
4
HOH
HOH
789
A
HOH
622
4
HOH
HOH
790
A
HOH
623
4
HOH
HOH
791
A
HOH
624
4
HOH
HOH
792
A
HOH
625
4
HOH
HOH
793
A
HOH
626
4
HOH
HOH
794
A
HOH
627
4
HOH
HOH
795
A
HOH
628
4
HOH
HOH
796
A
HOH
630
4
HOH
HOH
797
A
HOH
631
4
HOH
HOH
798
A
HOH
632
4
HOH
HOH
799
A
HOH
633
4
HOH
HOH
800
A
HOH
634
4
HOH
HOH
801
A
HOH
635
4
HOH
HOH
802
A
HOH
636
4
HOH
HOH
803
A
HOH
637
4
HOH
HOH
804
A
HOH
638
4
HOH
HOH
805
A
HOH
639
4
HOH
HOH
806
A
HOH
640
4
HOH
HOH
807
A
HOH
641
4
HOH
HOH
808
A
HOH
642
4
HOH
HOH
809
A
HOH
643
4
HOH
HOH
810
A
HOH
644
4
HOH
HOH
811
A
HOH
645
4
HOH
HOH
812
A
HOH
646
4
HOH
HOH
813
A
HOH
647
4
HOH
HOH
814
A
HOH
656
4
HOH
HOH
815
A
HOH
657
4
HOH
HOH
816
A
HOH
658
4
HOH
HOH
817
A
HOH
659
4
HOH
HOH
818
A
HOH
660
4
HOH
HOH
819
A
HOH
662
4
HOH
HOH
820
A
HOH
663
4
HOH
HOH
821
A
HOH
664
4
HOH
HOH
822
A
HOH
665
4
HOH
HOH
823
A
HOH
666
4
HOH
HOH
824
A
HOH
667
4
HOH
HOH
825
A
HOH
668
4
HOH
HOH
826
A
HOH
669
4
HOH
HOH
827
A
HOH
670
4
HOH
HOH
828
A
HOH
671
4
HOH
HOH
829
A
HOH
672
4
HOH
HOH
830
A
HOH
673
4
HOH
HOH
831
A
HOH
674
4
HOH
HOH
832
A
HOH
675
4
HOH
HOH
833
A
HOH
676
4
HOH
HOH
834
A
HOH
677
4
HOH
HOH
835
A
HOH
678
4
HOH
HOH
836
A
HOH
679
4
HOH
HOH
837
A
HOH
680
4
HOH
HOH
838
A
HOH
681
4
HOH
HOH
839
A
LEU
4
n
1
LEU
4
A
VAL
5
n
2
VAL
5
A
HIS
6
n
3
HIS
6
A
VAL
7
n
4
VAL
7
A
ALA
8
n
5
ALA
8
A
SER
9
n
6
SER
9
A
VAL
10
n
7
VAL
10
A
GLU
11
n
8
GLU
11
A
LYS
12
n
9
LYS
12
A
GLY
13
n
10
GLY
13
A
ARG
14
n
11
ARG
14
A
SER
15
n
12
SER
15
A
TYR
16
n
13
TYR
16
A
GLU
17
n
14
GLU
17
A
ASP
18
n
15
ASP
18
A
PHE
19
n
16
PHE
19
A
GLN
20
n
17
GLN
20
A
LYS
21
n
18
LYS
21
A
VAL
22
n
19
VAL
22
A
TYR
23
n
20
TYR
23
A
ASN
24
n
21
ASN
24
A
ALA
25
n
22
ALA
25
A
ILE
26
n
23
ILE
26
A
ALA
27
n
24
ALA
27
A
LEU
28
n
25
LEU
28
A
LYS
29
n
26
LYS
29
A
LEU
30
n
27
LEU
30
A
ARG
31
n
28
ARG
31
A
GLU
32
n
29
GLU
32
A
ASP
33
n
30
ASP
33
A
ASP
34
n
31
ASP
34
A
GLU
35
n
32
GLU
35
A
TYR
36
n
33
TYR
36
A
ASP
37
n
34
ASP
37
A
ASN
38
n
35
ASN
38
A
TYR
39
n
36
TYR
39
A
ILE
40
n
37
ILE
40
A
GLY
41
n
38
GLY
41
A
TYR
42
n
39
TYR
42
A
GLY
43
n
40
GLY
43
A
PRO
44
n
41
PRO
44
A
VAL
45
n
42
VAL
45
A
LEU
46
n
43
LEU
46
A
VAL
47
n
44
VAL
47
A
ARG
48
n
45
ARG
48
A
LEU
49
n
46
LEU
49
A
ALA
50
n
47
ALA
50
A
TRP
51
n
48
TRP
51
A
HIS
52
n
49
HIS
52
A
ILE
53
n
50
ILE
53
A
SER
54
n
51
SER
54
A
GLY
55
n
52
GLY
55
A
THR
56
n
53
THR
56
A
TRP
57
n
54
TRP
57
A
ASP
58
n
55
ASP
58
A
LYS
59
n
56
LYS
59
A
HIS
60
n
57
HIS
60
A
ASP
61
n
58
ASP
61
A
ASN
62
n
59
ASN
62
A
THR
63
n
60
THR
63
A
GLY
64
n
61
GLY
64
A
GLY
65
n
62
GLY
65
A
SER
66
n
63
SER
66
A
TYR
67
n
64
TYR
67
A
GLY
68
n
65
GLY
68
A
GLY
69
n
66
GLY
69
A
THR
70
n
67
THR
70
A
TYR
71
n
68
TYR
71
A
ARG
72
n
69
ARG
72
A
PHE
73
n
70
PHE
73
A
LYS
74
n
71
LYS
74
A
LYS
75
n
72
LYS
75
A
GLU
76
n
73
GLU
76
A
PHE
77
n
74
PHE
77
A
ASN
78
n
75
ASN
78
A
ASP
79
n
76
ASP
79
A
PRO
80
n
77
PRO
80
A
SER
81
n
78
SER
81
A
ASN
82
n
79
ASN
82
A
ALA
83
n
80
ALA
83
A
GLY
84
n
81
GLY
84
A
LEU
85
n
82
LEU
85
A
GLN
86
n
83
GLN
86
A
ASN
87
n
84
ASN
87
A
GLY
88
n
85
GLY
88
A
PHE
89
n
86
PHE
89
A
LYS
90
n
87
LYS
90
A
PHE
91
n
88
PHE
91
A
LEU
92
n
89
LEU
92
A
GLU
93
n
90
GLU
93
A
PRO
94
n
91
PRO
94
A
ILE
95
n
92
ILE
95
A
HIS
96
n
93
HIS
96
A
LYS
97
n
94
LYS
97
A
GLU
98
n
95
GLU
98
A
PHE
99
n
96
PHE
99
A
PRO
100
n
97
PRO
100
A
TRP
101
n
98
TRP
101
A
ILE
102
n
99
ILE
102
A
SER
103
n
100
SER
103
A
SER
104
n
101
SER
104
A
GLY
105
n
102
GLY
105
A
ASP
106
n
103
ASP
106
A
LEU
107
n
104
LEU
107
A
PHE
108
n
105
PHE
108
A
SER
109
n
106
SER
109
A
LEU
110
n
107
LEU
110
A
GLY
111
n
108
GLY
111
A
GLY
112
n
109
GLY
112
A
VAL
113
n
110
VAL
113
A
THR
114
n
111
THR
114
A
ALA
115
n
112
ALA
115
A
VAL
116
n
113
VAL
116
A
GLN
117
n
114
GLN
117
A
GLU
118
n
115
GLU
118
A
MET
119
n
116
MET
119
A
GLN
120
n
117
GLN
120
A
GLY
121
n
118
GLY
121
A
PRO
122
n
119
PRO
122
A
LYS
123
n
120
LYS
123
A
ILE
124
n
121
ILE
124
A
PRO
125
n
122
PRO
125
A
TRP
126
n
123
TRP
126
A
ARG
127
n
124
ARG
127
A
CYS
128
n
125
CYS
128
A
GLY
129
n
126
GLY
129
A
ARG
130
n
127
ARG
130
A
VAL
131
n
128
VAL
131
A
ASP
132
n
129
ASP
132
A
THR
133
n
130
THR
133
A
PRO
134
n
131
PRO
134
A
GLU
135
n
132
GLU
135
A
ASP
136
n
133
ASP
136
A
THR
137
n
134
THR
137
A
THR
138
n
135
THR
138
A
PRO
139
n
136
PRO
139
A
ASP
140
n
137
ASP
140
A
ASN
141
n
138
ASN
141
A
GLY
142
n
139
GLY
142
A
ARG
143
n
140
ARG
143
A
LEU
144
n
141
LEU
144
A
PRO
145
n
142
PRO
145
A
ASP
146
n
143
ASP
146
A
ALA
147
n
144
ALA
147
A
ASP
148
n
145
ASP
148
A
LYS
149
n
146
LYS
149
A
ASP
150
n
147
ASP
150
A
ALA
151
n
148
ALA
151
A
GLY
152
n
149
GLY
152
A
TYR
153
n
150
TYR
153
A
VAL
154
n
151
VAL
154
A
ARG
155
n
152
ARG
155
A
THR
156
n
153
THR
156
A
PHE
157
n
154
PHE
157
A
PHE
158
n
155
PHE
158
A
GLN
159
n
156
GLN
159
A
ARG
160
n
157
ARG
160
A
LEU
161
n
158
LEU
161
A
ASN
162
n
159
ASN
162
A
MET
163
n
160
MET
163
A
ASN
164
n
161
ASN
164
A
ASP
165
n
162
ASP
165
A
ARG
166
n
163
ARG
166
A
GLU
167
n
164
GLU
167
A
VAL
168
n
165
VAL
168
A
VAL
169
n
166
VAL
169
A
ALA
170
n
167
ALA
170
A
LEU
171
n
168
LEU
171
A
MET
172
n
169
MET
172
A
GLY
173
n
170
GLY
173
A
ALA
174
n
171
ALA
174
A
HIS
175
n
172
HIS
175
A
ALA
176
n
173
ALA
176
A
LEU
177
n
174
LEU
177
A
GLY
178
n
175
GLY
178
A
LYS
179
n
176
LYS
179
A
THR
180
n
177
THR
180
A
HIS
181
n
178
HIS
181
A
LEU
182
n
179
LEU
182
A
LYS
183
n
180
LYS
183
A
ASN
184
n
181
ASN
184
A
SER
185
n
182
SER
185
A
GLY
186
n
183
GLY
186
A
TYR
187
n
184
TYR
187
A
GLU
188
n
185
GLU
188
A
GLY
189
n
186
GLY
189
A
GLY
190
n
187
GLY
190
A
GLY
191
n
188
GLY
191
A
ALA
192
n
189
ALA
192
A
ASN
193
n
190
ASN
193
A
ASN
194
n
191
ASN
194
A
VAL
195
n
192
VAL
195
A
PHE
196
n
193
PHE
196
A
THR
197
n
194
THR
197
A
ASN
198
n
195
ASN
198
A
GLU
199
n
196
GLU
199
A
PHE
200
n
197
PHE
200
A
TYR
201
n
198
TYR
201
A
LEU
202
n
199
LEU
202
A
ASN
203
n
200
ASN
203
A
LEU
204
n
201
LEU
204
A
LEU
205
n
202
LEU
205
A
ASN
206
n
203
ASN
206
A
GLU
207
n
204
GLU
207
A
ASP
208
n
205
ASP
208
A
TRP
209
n
206
TRP
209
A
LYS
210
n
207
LYS
210
A
LEU
211
n
208
LEU
211
A
GLU
212
n
209
GLU
212
A
LYS
213
n
210
LYS
213
A
ASN
214
n
211
ASN
214
A
ASP
215
n
212
ASP
215
A
ALA
216
n
213
ALA
216
A
ASN
217
n
214
ASN
217
A
ASN
218
n
215
ASN
218
A
GLU
219
n
216
GLU
219
A
GLN
220
n
217
GLN
220
A
TRP
221
n
218
TRP
221
A
ASP
222
n
219
ASP
222
A
SER
223
n
220
SER
223
A
LYS
224
n
221
LYS
224
A
SER
225
n
222
SER
225
A
GLY
226
n
223
GLY
226
A
TYR
227
n
224
TYR
227
A
MET
228
n
225
MET
228
A
MET
229
n
226
MET
229
A
LEU
230
n
227
LEU
230
A
PRO
231
n
228
PRO
231
A
THR
232
n
229
THR
232
A
ASP
233
n
230
ASP
233
A
TYR
234
n
231
TYR
234
A
SER
235
n
232
SER
235
A
LEU
236
n
233
LEU
236
A
ILE
237
n
234
ILE
237
A
GLN
238
n
235
GLN
238
A
ASP
239
n
236
ASP
239
A
PRO
240
n
237
PRO
240
A
LYS
241
n
238
LYS
241
A
TYR
242
n
239
TYR
242
A
LEU
243
n
240
LEU
243
A
SER
244
n
241
SER
244
A
ILE
245
n
242
ILE
245
A
VAL
246
n
243
VAL
246
A
LYS
247
n
244
LYS
247
A
GLU
248
n
245
GLU
248
A
TYR
249
n
246
TYR
249
A
ALA
250
n
247
ALA
250
A
ASN
251
n
248
ASN
251
A
ASP
252
n
249
ASP
252
A
GLN
253
n
250
GLN
253
A
ASP
254
n
251
ASP
254
A
LYS
255
n
252
LYS
255
A
PHE
256
n
253
PHE
256
A
PHE
257
n
254
PHE
257
A
LYS
258
n
255
LYS
258
A
ASP
259
n
256
ASP
259
A
PHE
260
n
257
PHE
260
A
SER
261
n
258
SER
261
A
LYS
262
n
259
LYS
262
A
ALA
263
n
260
ALA
263
A
PHE
264
n
261
PHE
264
A
GLU
265
n
262
GLU
265
A
LYS
266
n
263
LYS
266
A
LEU
267
n
264
LEU
267
A
LEU
268
n
265
LEU
268
A
GLU
269
n
266
GLU
269
A
ASN
270
n
267
ASN
270
A
GLY
271
n
268
GLY
271
A
ILE
272
n
269
ILE
272
A
THR
273
n
270
THR
273
A
PHE
274
n
271
PHE
274
A
PRO
275
n
272
PRO
275
A
LYS
276
n
273
LYS
276
A
ASP
277
n
274
ASP
277
A
ALA
278
n
275
ALA
278
A
PRO
279
n
276
PRO
279
A
SER
280
n
277
SER
280
A
PRO
281
n
278
PRO
281
A
PHE
282
n
279
PHE
282
A
ILE
283
n
280
ILE
283
A
PHE
284
n
281
PHE
284
A
LYS
285
n
282
LYS
285
A
THR
286
n
283
THR
286
A
LEU
287
n
284
LEU
287
A
GLU
288
n
285
GLU
288
A
GLU
289
n
286
GLU
289
A
GLN
290
n
287
GLN
290
A
GLY
291
n
288
GLY
291
A
LEU
292
n
289
LEU
292
A
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NA
HEM
1_555
94.2
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NB
HEM
1_555
91.2
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NB
HEM
1_555
89.1
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
86.4
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
179.3
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
91.3
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
92.6
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
89.9
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
176.2
A
HEM
301
B
NC
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
89.7
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
177.8
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
87.7
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
87.8
A
HEM
301
B
NC
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
91.7
A
HEM
301
B
ND
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
88.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
HIS
6
A
N
HIS
3
A
O
THR
273
A
O
THR
270
A
N
LYS
210
A
N
LYS
207
A
O
ASP
222
A
O
ASP
219
A
N
TRP
221
A
N
TRP
218
A
O
MET
229
A
O
MET
226
1
A
ALA
192
-155.58
34.09
62.810
16.2123
5.490
-5.4039
0.0000
0.0000
3.4695
-0.0000
1.9344
0.1752
0.1576
0.1585
1.6000
29.1860
2701
56702
54001
5.0000
98.7700
1.000
0.230
0.1700
1
2.000
MOLECULAR REPLACEMENT
15.1700
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
32.2340
0.3270
1.6000
29.1860
439
2821
54
0
2328
1.45
50
4JMT
54036
2
2
1
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
ADSC
Quantum
data reduction
XDS
data scaling
XDS
refinement
PHENIX
1.6_289
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with 1H-pyrrolo[3,2-b]pyridin-6-ylmethanol
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
15
A
SER
12
HELX_P
A
ASP
33
A
ASP
30
1
1
19
A
GLU
35
A
GLU
32
HELX_P
A
ILE
40
A
ILE
37
1
2
6
A
TYR
42
A
TYR
39
HELX_P
A
GLY
55
A
GLY
52
1
3
14
A
GLY
69
A
GLY
66
HELX_P
A
ARG
72
A
ARG
69
5
4
4
A
PHE
73
A
PHE
70
HELX_P
A
ASN
78
A
ASN
75
1
5
6
A
ASP
79
A
ASP
76
HELX_P
A
GLY
84
A
GLY
81
5
6
6
A
LEU
85
A
LEU
82
HELX_P
A
PHE
99
A
PHE
96
1
7
15
A
SER
103
A
SER
100
HELX_P
A
MET
119
A
MET
116
1
8
17
A
PRO
134
A
PRO
131
HELX_P
A
THR
138
A
THR
135
5
9
5
A
ASP
150
A
ASP
147
HELX_P
A
ARG
160
A
ARG
157
1
10
11
A
ASN
164
A
ASN
161
HELX_P
A
GLY
173
A
GLY
170
1
11
10
A
ALA
174
A
ALA
171
HELX_P
A
LEU
177
A
LEU
174
5
12
4
A
HIS
181
A
HIS
178
HELX_P
A
GLY
186
A
GLY
183
1
13
6
A
ASN
198
A
ASN
195
HELX_P
A
GLU
207
A
GLU
204
1
14
10
A
LEU
230
A
LEU
227
HELX_P
A
ASP
239
A
ASP
236
1
15
10
A
ASP
239
A
ASP
236
HELX_P
A
ASN
251
A
ASN
248
1
16
13
A
ASP
252
A
ASP
249
HELX_P
A
ASN
270
A
ASN
267
1
17
19
A
THR
286
A
THR
283
HELX_P
A
GLY
291
A
GLY
288
1
18
6
metalc
2.054
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
metalc
2.089
A
HEM
301
B
FE
HEM
1_555
A
HOH
475
D
O
HOH
1_555
OXIDOREDUCTASE
Model system, bulk solvent, ordered waters, docking, ligand binding, OXIDOREDUCTASE
B3LRE1_YEAS1
UNP
1
72
B3LRE1
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK
YLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
72
362
4JMT
4
292
B3LRE1
A
1
1
289
1
PRO
engineered mutation
GLY
190
4JMT
A
B3LRE1
UNP
258
187
1
TRP
engineered mutation
GLY
191
4JMT
A
B3LRE1
UNP
259
188
1
GLY
deletion
4JMT
A
B3LRE1
UNP
260
1
ALA
deletion
4JMT
A
B3LRE1
UNP
261
2
3
parallel
anti-parallel
anti-parallel
A
HIS
6
A
HIS
3
A
VAL
7
A
VAL
4
A
ILE
272
A
ILE
269
A
THR
273
A
THR
270
A
TRP
209
A
TRP
206
A
LYS
213
A
LYS
210
A
GLU
219
A
GLU
216
A
SER
223
A
SER
220
A
MET
228
A
MET
225
A
MET
229
A
MET
226
BINDING SITE FOR RESIDUE HEM A 301
A
HEM
301
Software
23
BINDING SITE FOR RESIDUE 1LZ A 302
A
1LZ
302
Software
11
A
PRO
44
A
PRO
41
23
1_555
A
ARG
48
A
ARG
45
23
1_555
A
TRP
51
A
TRP
48
23
1_555
A
PRO
145
A
PRO
142
23
1_555
A
ASP
146
A
ASP
143
23
1_555
A
ALA
147
A
ALA
144
23
1_555
A
LEU
171
A
LEU
168
23
1_555
A
MET
172
A
MET
169
23
1_555
A
ALA
174
A
ALA
171
23
1_555
A
HIS
175
A
HIS
172
23
1_555
A
GLY
178
A
GLY
175
23
1_555
A
LYS
179
A
LYS
176
23
1_555
A
THR
180
A
THR
177
23
1_555
A
HIS
181
A
HIS
178
23
1_555
A
ASN
184
A
ASN
181
23
1_555
A
SER
185
A
SER
182
23
1_555
A
LEU
230
A
LEU
227
23
1_555
A
THR
232
A
THR
229
23
1_555
A
1LZ
302
C
1LZ
23
1_555
A
HOH
418
D
HOH
23
1_555
A
HOH
475
D
HOH
23
1_555
A
HOH
502
D
HOH
23
1_555
A
HOH
515
D
HOH
23
1_555
A
HIS
175
A
HIS
172
11
1_555
A
LEU
177
A
LEU
174
11
1_555
A
GLY
178
A
GLY
175
11
1_555
A
GLY
190
A
GLY
187
11
1_555
A
TYR
227
A
TYR
224
11
1_555
A
MET
228
A
MET
225
11
1_555
A
MET
229
A
MET
226
11
1_555
A
LEU
230
A
LEU
227
11
1_555
A
ASP
233
A
ASP
230
11
1_555
A
HEM
301
B
HEM
11
1_555
A
HOH
676
D
HOH
11
1_555
19
P 21 21 21