0.008587 0.000000 0.002586 0.000000 0.024090 0.000000 0.000000 0.000000 0.011551 0.000000 0.000000 0.000000 Grigg, J.C. Ke, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 106.760 90.000 116.461 41.511 90.417 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H16 N5 O14 P3 523.180 n GUANOSINE-5'-TRIPHOSPHATE non-polymer H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 R C N 12 N O N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 R C N 49 N O N 50 R C N 51 N N N 52 N C N 53 N O N 54 N N N 55 N C N 56 N N N 57 N C N 58 N C N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N O N 74 N P N 75 N O N 76 N O N 77 N O N 78 N C N 79 R C N 80 N O N 81 S C N 82 N O N 83 R C N 84 N O N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N N Y 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N P N 112 N O N 113 N O N 114 N O N 115 N O N 116 N P N 117 N O N 118 N O N 119 N O N 120 N P N 121 N O N 122 N O N 123 N O N 124 N C N 125 R C N 126 N O N 127 S C N 128 N O N 129 R C N 130 N O N 131 R C Y 132 N N Y 133 N C Y 134 N N Y 135 N C N 136 N C N 137 N O N 138 N N N 139 N C N 140 N N N 141 N N Y 142 N C N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N MG N 163 N O N 164 N P N 165 N O N 166 N O N 167 N O N 168 N C N 169 R C N 170 N O N 171 S C N 172 N O N 173 R C N 174 N O N 175 R C N 176 N N N 177 N C N 178 N O N 179 N N N 180 N C N 181 N O N 182 N C N 183 N C N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N sing Y 26 N sing Y 27 N doub N 28 N sing Y 29 N sing Y 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing N 35 N sing Y 36 N sing Y 37 N doub N 38 N sing Y 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing Y 100 N sing Y 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing Y 150 N sing Y 151 N sing Y 152 N doub N 153 N sing Y 154 N sing N 155 N sing Y 156 N doub N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N doub N 201 N sing N 202 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 110 7240 7245 10.1073/pnas.1222214110 23589841 T box RNA decodes both the information content and geometry of tRNA to affect gene expression. 2013 10.2210/pdb4jrc/pdb pdb_00004jrc 100 1 CCD 2012-07-01 ADSC QUANTUM 210 Horizontal focusing 5.05 asymmetric cut Si(111) SINGLE WAVELENGTH M x-ray 1 0.9767 1.0 52864 0.231 3.58 3.500 35.000 5591 94.70 9.50 A1 CHESS 0.9767 SYNCHROTRON CHESS BEAMLINE A1 18655.002 Distal Stem I region of the glyQS T box leader RNA 2 syn polymer 24.305 MAGNESIUM ION 2 syn non-polymer 18.015 water 25 nat water no yes (GTP)GAACCCUCUCUUCCGAAGCGAGCCGGGGGCGGUGGGAGCCCGGUGAAGACGGUUCC GGAACCCUCUCUUCCGAAGCGAGCCGGGGGCGGUGGGAGCCCGGUGAAGACGGUUCC A,B polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.80 56.14 VAPOR DIFFUSION, HANGING DROP 6.0 80mM NaCl, 12mM KCl, 20mM MgCl2, 40mM sodium cacodylate, 12mM spermine, 28% 2-methyl-1,3 propanediol, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 -4.381 1 A 24 A 80 -24.488 A_GTP24:C80_A 1 -2.014 -0.474 -0.306 -0.162 -4.966 1 19 A 25 A 79 3.492 A_G25:C79_A 2 -8.866 -0.045 0.086 0.126 3.883 1 20 A 26 A 78 -5.640 A_A26:U78_A 3 -15.374 -0.063 0.329 -0.068 2.878 1 20 A 27 A 77 -2.448 A_A27:U77_A 4 -21.032 0.028 0.038 -0.051 0.253 1 A 28 A 76 11.051 A_C28:G76_A 5 -16.029 0.887 0.253 0.182 -4.397 1 19 A 29 A 75 3.521 A_C29:G75_A 6 -20.051 0.622 0.475 -0.112 4.815 1 20 A 73 A 33 2.090 A_A73:U33_A 7 -18.057 0.262 -0.400 0.137 -5.685 1 19 A 72 A 34 0.810 A_G72:C34_A 8 -20.746 -0.077 0.131 0.120 0.942 1 20 A 71 A 35 -2.338 A_A71:U35_A 9 -17.668 -0.042 0.215 0.278 1.616 1 20 A 70 A 36 -2.833 A_A70:U36_A 10 -21.410 -0.510 0.275 -0.066 -3.314 1 19 A 69 A 37 4.247 A_G69:C37_A 11 -15.403 -0.815 0.447 -0.030 5.946 1 28 A 46 A 68 -4.177 A_G46:U68_A 12 -18.480 -2.772 0.456 -0.546 10.422 1 19 A 47 A 67 1.333 A_C47:G67_A 13 -15.673 0.136 -0.268 -0.064 7.121 1 19 A 48 A 66 7.000 A_C48:G66_A 14 -2.893 -0.168 -0.150 0.051 0.977 1 19 A 49 A 65 1.474 A_G49:C65_A 15 -5.989 -0.351 -0.167 -0.156 -1.426 1 19 A 50 A 64 3.747 A_G50:C64_A 16 -2.344 -0.374 -0.312 -0.127 -9.800 1 19 A 51 A 63 -7.724 A_G51:C63_A 17 -8.357 0.354 -0.651 -0.333 4.513 4 5 A 41 A 45 -107.449 A_A41:A45_A 18 14.386 4.563 0.609 1.075 5.696 4 24 A 57 A 61 -90.358 A_U57:A61_A 19 14.002 4.067 0.342 -2.291 11.059 2 A 44 A 56 124.723 A_G44:G56_A 20 -13.758 -2.047 0.878 -1.863 -17.298 1 19 A 62 A 43 1.705 A_G62:C43_A 21 -21.267 -0.261 -0.230 -0.172 19.990 1 19 B 43 B 62 3.026 B_C43:G62_B 22 -23.686 0.146 -0.281 -0.123 11.993 2 B 44 B 56 125.104 B_G44:G56_B 23 -10.875 -2.043 0.925 -1.955 -2.988 4 24 B 61 B 57 -91.138 B_A61:U57_B 24 13.829 -4.236 0.338 -2.530 -8.235 4 5 B 45 B 41 -106.754 B_A45:A41_B 25 11.054 -4.217 0.630 1.094 -1.969 1 B 24 B 80 -14.987 B_GTP24:C80_B 26 4.593 -0.032 0.456 -0.051 -1.352 1 19 B 25 B 79 -0.766 B_G25:C79_B 27 -9.751 -0.895 0.343 0.070 -0.985 1 20 B 26 B 78 -10.370 B_A26:U78_B 28 -19.116 -1.014 0.054 -0.099 -1.708 1 20 B 27 B 77 -0.255 B_A27:U77_B 29 -17.986 0.103 0.111 0.273 6.277 B 28 B 76 3.427 B_C28:G76_B 30 -12.896 0.047 0.329 0.553 6.251 1 B 29 B 75 -12.974 B_C29:G75_B 31 -29.120 -0.432 -0.287 -0.031 -5.160 1 20 B 33 B 73 3.793 B_U33:A73_B 32 -16.735 0.002 0.124 0.075 5.138 1 19 B 34 B 72 3.444 B_C34:G72_B 33 -21.145 0.591 0.407 -0.124 2.889 B 35 B 71 6.204 B_U35:A71_B 34 -21.440 0.103 0.322 0.192 -0.580 1 20 B 36 B 70 -1.795 B_U36:A70_B 35 -24.858 0.365 0.057 -0.114 4.715 1 19 B 37 B 69 4.916 B_C37:G69_B 36 -19.023 0.125 0.262 0.192 0.744 1 28 B 46 B 68 -6.018 B_G46:U68_B 37 -18.271 -3.036 0.251 -0.725 9.718 1 19 B 47 B 67 4.121 B_C47:G67_B 38 -9.631 -0.435 -0.346 0.139 3.251 1 19 B 48 B 66 4.590 B_C48:G66_B 39 -5.181 -0.111 -0.429 0.098 -4.497 1 19 B 49 B 65 2.589 B_G49:C65_B 40 -2.432 0.080 0.029 -0.092 -3.122 1 19 B 50 B 64 1.123 B_G50:C64_B 41 -8.930 0.004 -0.281 -0.258 -11.974 1 19 B 51 B 63 -2.308 B_G51:C63_B 42 -10.660 0.857 -0.593 0.010 2.830 43.461 A A 24 25 11.667 A A 80 79 3.219 8.573 0.792 -1.252 AA_GTP24G25:C79C80_AA 1 -4.586 6.242 42.411 -2.468 -1.485 2.834 32.332 A A 25 26 6.685 A A 79 78 2.952 3.712 -0.635 -1.202 AA_G25A26:U78C79_AA 2 -2.195 3.953 32.051 -2.741 0.796 3.039 35.516 A A 26 27 8.051 A A 78 77 3.223 4.894 0.189 -1.202 AA_A26A27:U77U78_AA 3 2.186 -3.597 35.122 -2.659 -0.002 2.932 37.832 A A 27 28 12.263 A A 77 76 3.228 7.896 1.125 -1.236 AA_A27C28:G76U77_AA 4 0.674 -1.047 37.023 -2.873 -1.653 3.144 34.298 A A 28 29 7.041 A A 76 75 3.341 4.139 -0.082 -1.359 AA_C28C29:G75G76_AA 5 2.546 -4.332 33.962 -2.951 0.537 5.243 159.420 A A 29 73 -71.960 A A 75 33 -0.092 -128.026 -0.403 -6.239 AA_C29A73:U33G75_AA 6 -94.968 53.379 4.443 -1.149 -1.294 -2.602 -36.700 A A 73 72 16.801 A A 33 34 -3.082 -10.384 0.102 1.066 AA_A73G72:C34U33_AA 7 -6.733 -10.893 -34.618 -2.966 0.987 -2.939 -28.979 A A 72 71 14.775 A A 34 35 -3.425 -7.295 -0.842 1.866 AA_G72A71:U35C34_AA 8 -3.906 -7.912 -27.796 -5.331 -0.826 -3.046 -38.530 A A 71 70 9.851 A A 35 36 -3.282 -6.468 0.090 1.121 AA_A71A70:U36U35_AA 9 -2.506 -3.818 -37.924 -2.480 0.439 -2.660 -33.816 A A 70 69 15.748 A A 36 37 -3.072 -9.054 0.050 1.176 AA_A70G69:C37U36_AA 10 0.547 0.951 -32.611 -3.328 0.007 2.340 -177.119 A A 69 46 -2.475 A A 37 68 2.859 4.939 -1.903 2.889 AA_G69G46:U68C37_AA 11 -167.143 -83.735 -153.900 -1.454 -1.247 2.767 42.211 A A 46 47 13.237 A A 68 67 3.134 9.449 0.451 -1.498 AA_G46C47:G67U68_AA 12 3.568 -4.999 41.038 -2.969 -0.290 2.706 30.809 A A 47 48 14.324 A A 67 66 3.294 7.532 0.334 -1.962 AA_C47C48:G66G67_AA 13 -1.791 3.407 29.843 -5.063 -0.955 2.653 28.370 A A 48 49 17.355 A A 66 65 3.341 8.383 -0.559 -1.908 AA_C48G49:C65G66_AA 14 -0.494 1.023 27.123 -5.706 1.033 2.576 32.482 A A 49 50 18.138 A A 65 64 3.241 9.987 0.187 -1.686 AA_G49G50:C64C65_AA 15 -1.353 2.457 30.919 -4.612 -0.550 2.988 38.810 A A 50 51 14.411 A A 64 63 3.525 9.477 -0.528 -1.654 AA_G50G51:C63C64_AA 16 2.920 -4.440 37.569 -3.661 1.156 0.150 172.760 A A 41 57 -79.178 A A 45 61 1.278 -153.238 3.015 -1.403 AA_A41U57:A61A45_AA 17 -79.366 41.008 25.870 -0.197 -1.772 -1.897 -15.010 A A 57 44 42.446 A A 61 56 -3.261 -9.838 2.284 -0.801 AA_U57G44:G56A61_AA 18 -5.324 -22.968 -10.025 -4.669 12.929 -2.853 177.437 A A 44 62 12.501 A A 56 43 -1.962 24.867 -1.546 -3.993 AA_G44G62:C43G56_AA 19 174.301 -87.620 98.701 -1.871 -0.109 2.982 132.262 A B 62 43 -3.952 A B 43 62 2.879 -7.226 0.130 -3.735 AB_G62C43:G62C43_BA 20 -0.114 0.062 132.161 -1.997 -0.072 3.464 -16.412 B B 43 44 -4.526 B B 62 56 3.754 1.289 2.788 0.539 BB_C43G44:G56G62_BB 21 1.332 4.675 -16.308 -2.876 10.787 2.268 172.928 B B 44 61 -9.563 B B 56 57 2.345 -18.900 -0.121 -3.424 BB_G44A61:U57G56_BB 22 -165.363 83.667 117.009 -1.642 -0.583 0.306 173.627 B B 61 45 -78.341 B B 57 41 1.525 -152.744 -2.926 -1.306 BB_A61A45:A41U57_BB 23 81.698 -41.902 39.858 -0.087 1.768 3.121 32.486 B B 24 25 6.025 B B 80 79 3.329 3.363 0.622 -1.539 BB_GTP24G25:C79C80_BB 24 -1.680 3.010 32.273 -3.334 -1.403 3.295 31.553 B B 25 26 1.084 B B 79 78 3.320 0.589 -0.584 -1.618 BB_G25A26:U78C79_BB 25 -0.250 0.460 31.547 -3.086 1.027 2.955 41.542 B B 26 27 10.460 B B 78 77 3.225 7.383 0.217 -1.282 BB_A26A27:U77U78_BB 26 -0.741 1.051 40.903 -2.554 -0.380 2.668 32.086 B B 27 28 11.005 B B 77 76 2.965 6.047 0.408 -1.289 BB_A27C28:G76U77_BB 27 -0.757 1.377 31.517 -3.276 -0.856 2.744 32.097 B B 28 29 6.146 B B 76 75 3.102 3.366 -0.366 -1.873 BB_C28C29:G75G76_BB 28 7.036 -12.847 31.159 -3.937 1.809 3.748 114.022 B B 29 33 4.908 B B 75 73 4.470 8.206 -4.632 -0.985 BB_C29U33:A73G75_BB 29 23.573 -14.100 112.212 -0.704 3.095 2.473 37.623 B B 33 34 15.307 B B 73 72 2.899 9.751 0.265 -1.180 BB_U33C34:G72A73_BB 30 -3.671 5.762 36.201 -2.892 -0.811 3.002 25.123 B B 34 35 9.899 B B 72 71 3.345 4.285 -0.577 -1.839 BB_C34U35:A71G72_BB 31 -0.665 1.536 24.752 -5.462 1.134 2.862 37.814 B B 35 36 14.725 B B 71 70 3.238 9.448 -0.348 -1.191 BB_U35U36:A70A71_BB 32 -0.955 1.488 36.645 -2.991 0.421 2.536 33.355 B B 36 37 20.478 B B 70 69 3.076 11.525 0.064 -1.068 BB_U36C37:G69A70_BB 33 -0.038 0.067 31.354 -3.557 -0.118 -0.783 10.887 B B 37 46 65.971 B B 69 68 3.189 9.874 2.317 -2.636 BB_C37G46:U68G69_BB 34 1.644 -10.982 4.286 -22.143 -10.841 2.903 38.999 B B 46 47 8.582 B B 68 67 3.102 5.704 0.941 -1.660 BB_G46C47:G67U68_BB 35 3.247 -4.886 38.463 -3.124 -1.047 2.661 33.884 B B 47 48 18.045 B B 67 66 3.314 10.358 0.049 -1.690 BB_C47C48:G66G67_BB 36 -0.124 0.217 32.306 -4.459 -0.103 2.816 30.899 B B 48 49 17.713 B B 66 65 3.461 9.255 -0.575 -1.837 BB_C48G49:C65G66_BB 37 -5.108 9.776 29.076 -5.226 0.099 2.490 33.400 B B 49 50 17.979 B B 65 64 3.147 10.175 -0.308 -1.694 BB_G49G50:C64C65_BB 38 1.174 -2.074 31.833 -4.437 0.707 2.887 37.836 B B 50 51 16.904 B B 64 63 3.486 10.813 -0.108 -1.636 BB_G50G51:C63C64_BB 39 2.176 -3.403 36.249 -3.908 0.445 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn repository Initial release Database references Database references Data collection Database references Derived calculations 1 0 2013-04-24 1 1 2013-05-01 1 2 2013-05-22 1 3 2024-02-28 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_label_asym_id RCSB Y RCSB 2013-03-21 REL REL 0.132 21.162 99.10 6.90 0.135 9.995 100.00 8.90 0.145 5.707 99.70 10.10 0.187 4.019 100.00 11.40 0.211 3.737 100.00 11.50 0.269 3.251 100.00 11.80 0.306 2.632 100.00 12.00 0.342 2.097 100.00 12.10 0.373 1.912 100.00 11.70 0.369 1.849 100.00 11.40 0.423 1.627 100.00 10.60 0.413 1.667 99.70 9.90 0.239 1.726 99.00 9.10 0.349 1.790 96.40 8.40 0.478 1.590 95.40 7.70 0.459 1.286 89.90 7.10 0.394 1.381 85.30 7.00 0.444 1.327 81.20 6.70 0.541 1.264 75.10 6.10 0.497 1.181 72.20 5.70 MG MAGNESIUM ION HOH water Synthesized in vitro using T7 RNA polymerase from a plasmid template sample MG 2 2 MG MG 101 A MG 1 2 MG MG 101 B HOH 1 3 HOH HOH 201 A HOH 2 3 HOH HOH 202 A HOH 4 3 HOH HOH 203 A HOH 5 3 HOH HOH 204 A HOH 7 3 HOH HOH 205 A HOH 11 3 HOH HOH 206 A HOH 12 3 HOH HOH 207 A HOH 13 3 HOH HOH 208 A HOH 18 3 HOH HOH 209 A HOH 20 3 HOH HOH 210 A HOH 24 3 HOH HOH 211 A HOH 25 3 HOH HOH 212 A HOH 26 3 HOH HOH 213 A HOH 3 3 HOH HOH 201 B HOH 6 3 HOH HOH 202 B HOH 8 3 HOH HOH 203 B HOH 9 3 HOH HOH 204 B HOH 10 3 HOH HOH 205 B HOH 14 3 HOH HOH 206 B HOH 16 3 HOH HOH 207 B HOH 19 3 HOH HOH 208 B HOH 21 3 HOH HOH 209 B HOH 22 3 HOH HOH 210 B HOH 23 3 HOH HOH 211 B HOH 27 3 HOH HOH 212 B 0.770 0.780 0.710 5022 4428 594 0.760 0.750 0.870 855 791 64 0.810 0.840 0.670 709 586 123 0.790 0.800 0.750 852 744 108 0.760 0.770 0.680 861 761 100 0.760 0.770 0.740 1517 1381 136 GTP 24 n 1 GTP 24 A G 25 n 2 G 25 A A 26 n 3 A 26 A A 27 n 4 A 27 A C 28 n 5 C 28 A C 29 n 6 C 29 A C 30 n 7 C 30 A U 31 n 8 U 31 A C 32 n 9 C 32 A U 33 n 10 U 33 A C 34 n 11 C 34 A U 35 n 12 U 35 A U 36 n 13 U 36 A C 37 n 14 C 37 A C 38 n 15 C 38 A G 39 n 16 G 39 A A 40 n 17 A 40 A A 41 n 18 A 41 A G 42 n 19 G 42 A C 43 n 20 C 43 A G 44 n 21 G 44 A A 45 n 22 A 45 A G 46 n 23 G 46 A C 47 n 24 C 47 A C 48 n 25 C 48 A G 49 n 26 G 49 A G 50 n 27 G 50 A G 51 n 28 G 51 A G 52 n 29 G 52 A G 53 n 30 G 53 A C 54 n 31 C 54 A G 55 n 32 G 55 A G 56 n 33 G 56 A U 57 n 34 U 57 A G 58 n 35 G 58 A G 59 n 36 G 59 A G 60 n 37 G 60 A A 61 n 38 A 61 A G 62 n 39 G 62 A C 63 n 40 C 63 A C 64 n 41 C 64 A C 65 n 42 C 65 A G 66 n 43 G 66 A G 67 n 44 G 67 A U 68 n 45 U 68 A G 69 n 46 G 69 A A 70 n 47 A 70 A A 71 n 48 A 71 A G 72 n 49 G 72 A A 73 n 50 A 73 A C 74 n 51 C 74 A G 75 n 52 G 75 A G 76 n 53 G 76 A U 77 n 54 U 77 A U 78 n 55 U 78 A C 79 n 56 C 79 A C 80 n 57 C 80 A GTP 24 n 1 GTP 24 B G 25 n 2 G 25 B A 26 n 3 A 26 B A 27 n 4 A 27 B C 28 n 5 C 28 B C 29 n 6 C 29 B C 30 n 7 C 30 B U 31 n 8 U 31 B C 32 n 9 C 32 B U 33 n 10 U 33 B C 34 n 11 C 34 B U 35 n 12 U 35 B U 36 n 13 U 36 B C 37 n 14 C 37 B C 38 n 15 C 38 B G 39 n 16 G 39 B A 40 n 17 A 40 B A 41 n 18 A 41 B G 42 n 19 G 42 B C 43 n 20 C 43 B G 44 n 21 G 44 B A 45 n 22 A 45 B G 46 n 23 G 46 B C 47 n 24 C 47 B C 48 n 25 C 48 B G 49 n 26 G 49 B G 50 n 27 G 50 B G 51 n 28 G 51 B G 52 n 29 G 52 B G 53 n 30 G 53 B C 54 n 31 C 54 B G 55 n 32 G 55 B G 56 n 33 G 56 B U 57 n 34 U 57 B G 58 n 35 G 58 B G 59 n 36 G 59 B G 60 n 37 G 60 B A 61 n 38 A 61 B G 62 n 39 G 62 B C 63 n 40 C 63 B C 64 n 41 C 64 B C 65 n 42 C 65 B G 66 n 43 G 66 B G 67 n 44 G 67 B U 68 n 45 U 68 B G 69 n 46 G 69 B A 70 n 47 A 70 B A 71 n 48 A 71 B G 72 n 49 G 72 B A 73 n 50 A 73 B C 74 n 51 C 74 B G 75 n 52 G 75 B G 76 n 53 G 76 B U 77 n 54 U 77 B U 78 n 55 U 78 B C 79 n 56 C 79 B C 80 n 57 C 80 B 1.1106 1.0520 -0.1352 0.8831 -0.7675 1.5182 -0.7386 1.4023 0.3415 -0.5280 -0.0318 0.1217 -0.6032 -0.4585 0.5808 1.2493 0.0238 -0.3625 1.4765 -0.1706 0.6877 refined 16.6610 49.9943 -8.7180 X-RAY DIFFRACTION 3.6283 0.2261 1.1720 5.3467 -1.2178 0.9388 -0.1027 0.2973 0.1901 0.1058 0.0199 0.1957 -0.1163 0.0397 0.0959 0.6234 0.0244 -0.1886 0.3289 -0.0663 0.4647 refined 14.6338 45.6602 12.1494 X-RAY DIFFRACTION 4.8434 1.5956 -2.3259 4.7993 2.1744 4.5734 -0.8383 0.9265 0.8614 -0.6443 1.2420 0.3721 0.0950 -0.7815 0.2788 1.4041 0.0416 -0.5583 1.6596 -0.0917 0.7231 refined 10.8361 50.0262 -21.7703 X-RAY DIFFRACTION 3.0535 -0.0068 0.9871 2.9871 -0.5061 0.3890 -0.6597 -0.0276 -0.1546 -0.1952 0.5633 0.0058 -0.3010 1.5212 0.0341 1.4957 -0.3037 0.0132 2.0283 -0.0993 0.5490 refined 36.7448 15.2994 50.0423 X-RAY DIFFRACTION 1.7832 0.9028 -1.7381 2.6998 -2.9547 3.5887 0.3214 -0.7736 -0.1093 0.6981 -0.1749 -0.0449 -0.7013 0.7871 0.0030 0.9211 -0.0804 -0.0975 0.6205 -0.0009 0.4858 refined 28.4895 19.4721 29.9598 X-RAY DIFFRACTION 2.2348 -1.7207 0.1968 5.8040 -2.4489 2.5524 -0.0504 -0.2493 -0.1786 0.5593 0.2031 0.2963 0.0353 -0.3017 -0.1244 0.7165 -0.0672 -0.1304 0.3402 -0.0057 0.3874 refined 16.5223 23.2008 23.2747 X-RAY DIFFRACTION 2.1831 -0.4185 2.3671 2.5398 -0.2610 2.6442 -0.0412 -1.1809 0.0334 0.9528 0.3591 0.0320 -0.4755 1.0078 -0.0006 1.4719 -0.3737 -0.2032 1.6357 -0.0498 0.4283 refined 34.2646 15.3918 47.7990 X-RAY DIFFRACTION A 0 A 0 X-RAY DIFFRACTION 1 chain 'A' and (resid 24 through 40 ) A 0 A 0 X-RAY DIFFRACTION 2 chain 'A' and (resid 41 through 73 ) A 0 A 0 X-RAY DIFFRACTION 3 chain 'A' and (resid 74 through 80 ) B 0 B 0 X-RAY DIFFRACTION 4 chain 'B' and (resid 24 through 32 ) B 0 B 0 X-RAY DIFFRACTION 5 chain 'B' and (resid 33 through 40 ) B 0 B 0 X-RAY DIFFRACTION 6 chain 'B' and (resid 41 through 68 ) B 0 B 0 X-RAY DIFFRACTION 7 chain 'B' and (resid 69 through 80 ) author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric A A 40 A OP2 A 17 1_555 A MG 101 C MG MG 1_555 A G 42 A O6 G 19 1_555 161.4 B A 40 B OP2 A 17 1_555 B MG 101 D MG MG 1_555 B G 42 B O6 G 19 1_555 156.7 B A 40 B OP2 A 17 1_555 B MG 101 D MG MG 1_555 B HOH 210 F O HOH 1_555 87.2 B G 42 B O6 G 19 1_555 B MG 101 D MG MG 1_555 B HOH 210 F O HOH 1_555 71.3 A GTP 24 GUANOSINE-5'-TRIPHOSPHATE A GTP 1 G B GTP 24 GUANOSINE-5'-TRIPHOSPHATE B GTP 1 G 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 12.89 1.10 110.50 123.39 B B B O3' P OP1 GTP G G 24 25 25 Y 205.220 81.9439 33.850 0.2427 0.2010 0.2051 2.6730 20.1400 1151 11484 10.0200 95.7100 1.000 1.000 0.7754 0.3900 1 1.350 SAD 28.4400 0.9000 1.1100 ML FLAT BULK SOLVENT MODEL 2.6730 20.1400 25 2499 2 2472 0 0.001 2762 0.409 4308 0.019 568 0.002 114 11.385 1366 0.3642 0.3358 2.7945 118 1054 1172 8 79.0000 0.3948 0.3220 2.9414 139 1257 1396 8 93.0000 0.3302 0.2628 3.1251 145 1304 1449 8 99.0000 0.2522 0.2216 3.3654 144 1304 1448 8 98.0000 0.2475 0.1883 3.7022 148 1310 1458 8 97.0000 0.2074 0.1636 4.2335 151 1347 1498 8 100.0000 0.2261 0.1738 5.3175 151 1364 1515 8 100.0000 0.1969 0.1767 20.1403 155 1393 1548 8 99.0000 48.89 2.650 35.000 4JRC 11578 -3 0.068 1 10.900 3.6 97.200 0.484 2.650 2.700 1.808 473 1 3.100 82.700 0.482 2.700 2.740 1.931 529 1 3.100 85.600 0.418 2.740 2.800 2.041 508 1 3.300 90.100 0.323 2.800 2.850 3.086 534 1 3.400 94.200 0.305 2.850 2.920 3.507 615 1 3.400 97.500 0.218 2.920 2.980 5.286 571 1 3.600 99.100 0.212 2.980 3.060 5.942 572 1 3.600 100.000 0.140 3.060 3.140 9.822 588 1 3.600 100.000 0.113 3.140 3.230 12.164 605 1 3.700 100.000 0.103 3.230 3.340 16.639 589 1 3.700 99.700 0.085 3.340 3.460 24.870 600 1 3.700 99.500 0.086 3.460 3.600 15.507 578 1 3.700 100.000 0.067 3.600 3.760 20.645 598 1 3.700 99.800 0.058 3.760 3.960 23.083 585 1 3.700 99.800 0.051 3.960 4.200 27.945 596 1 3.600 100.000 0.050 4.200 4.530 27.776 593 1 3.700 100.000 0.045 4.530 4.980 30.338 619 1 3.700 100.000 0.033 4.980 5.700 36.380 596 1 3.600 99.700 0.033 5.700 7.170 37.338 612 1 3.600 99.700 0.026 7.170 35.000 47.560 617 1 3.400 96.300 data reduction Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ DENZO program data scaling Zbyszek Otwinowski hkl@hkl-xray.com http://www.hkl-xray.com/ SCALEPACK program phasing Tom Terwilliger terwilliger@LANL.gov http://www.solve.lanl.gov/ SOLVE program phasing Thomas C. Terwilliger terwilliger@lanl.gov 20-Mar-2010 http://www.solve.lanl.gov/ RESOLVE program 2.15 refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.8.1_1168 data extraction PDB deposit@deposit.rcsb.org April 22, 2011 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.11 data collection HKL-2000 data reduction HKL-2000 data scaling HKL-2000 Distal Stem I region from G. kaustophilus glyQS T box RNA 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N covale 1.591 both A GTP 24 A O3' GTP 1 1_555 A G 25 A P G 2 1_555 covale 1.591 both B GTP 24 B O3' GTP 1 1_555 B G 25 B P G 2 1_555 metalc 2.320 A A 40 A OP2 A 17 1_555 A MG 101 C MG MG 1_555 metalc 2.111 A G 42 A O6 G 19 1_555 A MG 101 C MG MG 1_555 metalc 2.364 B A 40 B OP2 A 17 1_555 B MG 101 D MG MG 1_555 metalc 2.079 B G 42 B O6 G 19 1_555 B MG 101 D MG MG 1_555 metalc 2.628 B MG 101 D MG MG 1_555 B HOH 210 F O HOH 1_555 hydrog GTP-C PAIR A GTP 24 A N1 GTP 1 1_555 A C 80 A N3 C 57 1_555 hydrog WATSON-CRICK A G 25 A N1 G 2 1_555 A C 79 A N3 C 56 1_555 hydrog WATSON-CRICK A G 25 A N2 G 2 1_555 A C 79 A O2 C 56 1_555 hydrog WATSON-CRICK A G 25 A O6 G 2 1_555 A C 79 A N4 C 56 1_555 hydrog WATSON-CRICK A A 26 A N1 A 3 1_555 A U 78 A N3 U 55 1_555 hydrog WATSON-CRICK A A 26 A N6 A 3 1_555 A U 78 A O4 U 55 1_555 hydrog WATSON-CRICK A A 27 A N1 A 4 1_555 A U 77 A N3 U 54 1_555 hydrog WATSON-CRICK A A 27 A N6 A 4 1_555 A U 77 A O4 U 54 1_555 hydrog C-G PAIR A C 28 A O2 C 5 1_555 A G 76 A N1 G 53 1_555 hydrog WATSON-CRICK A C 29 A N3 C 6 1_555 A G 75 A N1 G 52 1_555 hydrog WATSON-CRICK A C 29 A N4 C 6 1_555 A G 75 A O6 G 52 1_555 hydrog WATSON-CRICK A C 29 A O2 C 6 1_555 A G 75 A N2 G 52 1_555 hydrog C-A MISPAIR A C 30 A O2 C 7 1_555 A A 73 A N6 A 50 1_555 hydrog U-G MISPAIR A U 31 A O4 U 8 1_555 A G 75 A N2 G 52 1_555 hydrog C-G PAIR A C 32 A N4 C 9 1_555 A G 75 A N3 G 52 1_555 hydrog WATSON-CRICK A U 33 A N3 U 10 1_555 A A 73 A N1 A 50 1_555 hydrog WATSON-CRICK A U 33 A O4 U 10 1_555 A A 73 A N6 A 50 1_555 hydrog WATSON-CRICK A C 34 A N3 C 11 1_555 A G 72 A N1 G 49 1_555 hydrog WATSON-CRICK A C 34 A N4 C 11 1_555 A G 72 A O6 G 49 1_555 hydrog WATSON-CRICK A C 34 A O2 C 11 1_555 A G 72 A N2 G 49 1_555 hydrog WATSON-CRICK A U 35 A N3 U 12 1_555 A A 71 A N1 A 48 1_555 hydrog WATSON-CRICK A U 35 A O4 U 12 1_555 A A 71 A N6 A 48 1_555 hydrog WATSON-CRICK A U 36 A N3 U 13 1_555 A A 70 A N1 A 47 1_555 hydrog WATSON-CRICK A U 36 A O4 U 13 1_555 A A 70 A N6 A 47 1_555 hydrog WATSON-CRICK A C 37 A N3 C 14 1_555 A G 69 A N1 G 46 1_555 hydrog WATSON-CRICK A C 37 A N4 C 14 1_555 A G 69 A O6 G 46 1_555 hydrog WATSON-CRICK A C 37 A O2 C 14 1_555 A G 69 A N2 G 46 1_555 hydrog TYPE_5_PAIR A A 41 A N1 A 18 1_555 A A 45 A N6 A 22 1_555 hydrog TYPE_5_PAIR A A 41 A N6 A 18 1_555 A A 45 A N7 A 22 1_555 hydrog G-A MISPAIR A G 42 A N2 G 19 1_555 A A 61 A N1 A 38 1_555 hydrog C-G PAIR A C 43 A N4 C 20 1_555 A G 55 A O6 G 32 1_555 hydrog WATSON-CRICK A C 43 A N3 C 20 1_555 A G 62 A N1 G 39 1_555 hydrog WATSON-CRICK A C 43 A N4 C 20 1_555 A G 62 A O6 G 39 1_555 hydrog WATSON-CRICK A C 43 A O2 C 20 1_555 A G 62 A N2 G 39 1_555 hydrog G-G MISPAIR A G 44 A O6 G 21 1_555 A G 56 A N1 G 33 1_555 hydrog TYPE_10_PAIR A A 45 A N1 A 22 1_555 A G 58 A N2 G 35 1_555 hydrog TYPE_10_PAIR A A 45 A N6 A 22 1_555 A G 58 A N3 G 35 1_555 hydrog TYPE_28_PAIR A G 46 A N1 G 23 1_555 A U 68 A O2 U 45 1_555 hydrog TYPE_28_PAIR A G 46 A O6 G 23 1_555 A U 68 A N3 U 45 1_555 hydrog WATSON-CRICK A C 47 A N3 C 24 1_555 A G 67 A N1 G 44 1_555 hydrog WATSON-CRICK A C 47 A N4 C 24 1_555 A G 67 A O6 G 44 1_555 hydrog WATSON-CRICK A C 47 A O2 C 24 1_555 A G 67 A N2 G 44 1_555 hydrog WATSON-CRICK A C 48 A N3 C 25 1_555 A G 66 A N1 G 43 1_555 hydrog WATSON-CRICK A C 48 A N4 C 25 1_555 A G 66 A O6 G 43 1_555 hydrog WATSON-CRICK A C 48 A O2 C 25 1_555 A G 66 A N2 G 43 1_555 hydrog WATSON-CRICK A G 49 A N1 G 26 1_555 A C 65 A N3 C 42 1_555 hydrog WATSON-CRICK A G 49 A N2 G 26 1_555 A C 65 A O2 C 42 1_555 hydrog WATSON-CRICK A G 49 A O6 G 26 1_555 A C 65 A N4 C 42 1_555 hydrog WATSON-CRICK A G 50 A N1 G 27 1_555 A C 64 A N3 C 41 1_555 hydrog WATSON-CRICK A G 50 A N2 G 27 1_555 A C 64 A O2 C 41 1_555 hydrog WATSON-CRICK A G 50 A O6 G 27 1_555 A C 64 A N4 C 41 1_555 hydrog WATSON-CRICK A G 51 A N1 G 28 1_555 A C 63 A N3 C 40 1_555 hydrog WATSON-CRICK A G 51 A N2 G 28 1_555 A C 63 A O2 C 40 1_555 hydrog WATSON-CRICK A G 51 A O6 G 28 1_555 A C 63 A N4 C 40 1_555 hydrog REVERSED HOOGSTEEN A U 57 A N3 U 34 1_555 A A 61 A N7 A 38 1_555 hydrog REVERSED HOOGSTEEN A U 57 A O2 U 34 1_555 A A 61 A N6 A 38 1_555 hydrog GTP-C PAIR B GTP 24 B N1 GTP 1 1_555 B C 80 B N3 C 57 1_555 hydrog WATSON-CRICK B G 25 B N1 G 2 1_555 B C 79 B N3 C 56 1_555 hydrog WATSON-CRICK B G 25 B N2 G 2 1_555 B C 79 B O2 C 56 1_555 hydrog WATSON-CRICK B G 25 B O6 G 2 1_555 B C 79 B N4 C 56 1_555 hydrog WATSON-CRICK B A 26 B N1 A 3 1_555 B U 78 B N3 U 55 1_555 hydrog WATSON-CRICK B A 26 B N6 A 3 1_555 B U 78 B O4 U 55 1_555 hydrog WATSON-CRICK B A 27 B N1 A 4 1_555 B U 77 B N3 U 54 1_555 hydrog WATSON-CRICK B A 27 B N6 A 4 1_555 B U 77 B O4 U 54 1_555 hydrog C-G PAIR B C 28 B O2 C 5 1_555 B G 76 B N2 G 53 1_555 hydrog C-G PAIR B C 29 B N4 C 6 1_555 B G 75 B O6 G 52 1_555 hydrog C-C MISPAIR B C 30 B O2 C 7 1_555 B C 32 B N4 C 9 1_555 hydrog TYPE_25_PAIR B C 30 B N3 C 7 1_555 B A 73 B N6 A 50 1_555 hydrog TYPE_25_PAIR B C 30 B N4 C 7 1_555 B A 73 B N7 A 50 1_555 hydrog U-G MISPAIR B U 31 B O4 U 8 1_555 B G 75 B N2 G 52 1_555 hydrog C-G PAIR B C 32 B N4 C 9 1_555 B G 75 B N3 G 52 1_555 hydrog WATSON-CRICK B U 33 B N3 U 10 1_555 B A 73 B N1 A 50 1_555 hydrog WATSON-CRICK B U 33 B O4 U 10 1_555 B A 73 B N6 A 50 1_555 hydrog WATSON-CRICK B C 34 B N3 C 11 1_555 B G 72 B N1 G 49 1_555 hydrog WATSON-CRICK B C 34 B N4 C 11 1_555 B G 72 B O6 G 49 1_555 hydrog WATSON-CRICK B C 34 B O2 C 11 1_555 B G 72 B N2 G 49 1_555 hydrog U-A PAIR B U 35 B N3 U 12 1_555 B A 71 B N1 A 48 1_555 hydrog WATSON-CRICK B U 36 B N3 U 13 1_555 B A 70 B N1 A 47 1_555 hydrog WATSON-CRICK B U 36 B O4 U 13 1_555 B A 70 B N6 A 47 1_555 hydrog WATSON-CRICK B C 37 B N3 C 14 1_555 B G 69 B N1 G 46 1_555 hydrog WATSON-CRICK B C 37 B N4 C 14 1_555 B G 69 B O6 G 46 1_555 hydrog WATSON-CRICK B C 37 B O2 C 14 1_555 B G 69 B N2 G 46 1_555 hydrog TYPE_5_PAIR B A 41 B N1 A 18 1_555 B A 45 B N6 A 22 1_555 hydrog TYPE_5_PAIR B A 41 B N6 A 18 1_555 B A 45 B N7 A 22 1_555 hydrog TYPE_10_PAIR B G 42 B N2 G 19 1_555 B A 61 B N1 A 38 1_555 hydrog TYPE_10_PAIR B G 42 B N3 G 19 1_555 B A 61 B N6 A 38 1_555 hydrog C-G PAIR B C 43 B N4 C 20 1_555 B G 55 B O6 G 32 1_555 hydrog WATSON-CRICK B C 43 B N3 C 20 1_555 B G 62 B N1 G 39 1_555 hydrog WATSON-CRICK B C 43 B N4 C 20 1_555 B G 62 B O6 G 39 1_555 hydrog WATSON-CRICK B C 43 B O2 C 20 1_555 B G 62 B N2 G 39 1_555 hydrog G-G MISPAIR B G 44 B O6 G 21 1_555 B G 56 B N1 G 33 1_555 hydrog A-G MISPAIR B A 45 B N1 A 22 1_555 B G 58 B N2 G 35 1_555 hydrog TYPE_28_PAIR B G 46 B N1 G 23 1_555 B U 68 B O2 U 45 1_555 hydrog TYPE_28_PAIR B G 46 B O6 G 23 1_555 B U 68 B N3 U 45 1_555 hydrog WATSON-CRICK B C 47 B N3 C 24 1_555 B G 67 B N1 G 44 1_555 hydrog WATSON-CRICK B C 47 B N4 C 24 1_555 B G 67 B O6 G 44 1_555 hydrog WATSON-CRICK B C 47 B O2 C 24 1_555 B G 67 B N2 G 44 1_555 hydrog WATSON-CRICK B C 48 B N3 C 25 1_555 B G 66 B N1 G 43 1_555 hydrog WATSON-CRICK B C 48 B N4 C 25 1_555 B G 66 B O6 G 43 1_555 hydrog WATSON-CRICK B C 48 B O2 C 25 1_555 B G 66 B N2 G 43 1_555 hydrog WATSON-CRICK B G 49 B N1 G 26 1_555 B C 65 B N3 C 42 1_555 hydrog WATSON-CRICK B G 49 B N2 G 26 1_555 B C 65 B O2 C 42 1_555 hydrog WATSON-CRICK B G 49 B O6 G 26 1_555 B C 65 B N4 C 42 1_555 hydrog WATSON-CRICK B G 50 B N1 G 27 1_555 B C 64 B N3 C 41 1_555 hydrog WATSON-CRICK B G 50 B N2 G 27 1_555 B C 64 B O2 C 41 1_555 hydrog WATSON-CRICK B G 50 B O6 G 27 1_555 B C 64 B N4 C 41 1_555 hydrog WATSON-CRICK B G 51 B N1 G 28 1_555 B C 63 B N3 C 40 1_555 hydrog WATSON-CRICK B G 51 B N2 G 28 1_555 B C 63 B O2 C 40 1_555 hydrog WATSON-CRICK B G 51 B O6 G 28 1_555 B C 63 B N4 C 40 1_555 hydrog REVERSED HOOGSTEEN B U 57 B N3 U 34 1_555 B A 61 B N7 A 38 1_555 hydrog REVERSED HOOGSTEEN B U 57 B O2 U 34 1_555 B A 61 B N6 A 38 1_555 RNA T box RNA, Regulatory RNA leader sequence, tRNA binding, RNA 4JRC PDB 1 4JRC GGAACCCUCUCUUCCGAAGCGAGCCGGGGGCGGUGGGAGCCCGGUGAAGACGGUUCC 24 80 4JRC 24 80 4JRC A 1 1 57 24 80 4JRC 24 80 4JRC B 1 1 57 Software 2 Software 3 A A 40 A A 17 2 1_555 A G 42 A G 19 2 1_555 B A 40 B A 17 3 1_555 B G 42 B G 19 3 1_555 B HOH 210 F HOH 3 1_555 5 C 1 2 1