0.019739 0.000000 0.006212 0.000000 0.012538 0.000000 0.000000 0.000000 0.018842 0.00000 0.00000 0.00000 Batra, V.K. Perera, L. Ping, L. Shock, D.D. Beard, W.A. Pedersen, L.C. Pedersen, L.G. Wilson, S.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 107.47 90.00 50.660 79.760 55.640 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C9 H16 N3 O13 P3 467.157 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N O N 90 N P N 91 N O N 92 N O N 93 N O N 94 N C N 95 R C N 96 N O N 97 S C N 98 N O N 99 N C N 100 R C Y 101 N N Y 102 N C Y 103 N N Y 104 N C Y 105 N C N 106 N N Y 107 N N Y 108 N C Y 109 N N Y 110 N C N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N O N 126 N P N 127 N O N 128 N O N 129 N O N 130 N C N 131 R C N 132 N O N 133 S C N 134 N O N 135 N C N 136 R C N 137 N N N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N C N 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C Y 171 N N Y 172 N C Y 173 N N Y 174 N C N 175 N C N 176 N O N 177 N N N 178 N C N 179 N N N 180 N N Y 181 N C N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N P N 198 N O N 199 N O N 200 N O N 201 N C N 202 R C N 203 N O N 204 S C N 205 N O N 206 N C N 207 R C N 208 N N N 209 N C N 210 N O N 211 N N N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N O Y 233 N C Y 234 N C Y 235 N C Y 236 N N Y 237 N C N 238 N O Y 239 N N N 240 R C N 241 N C N 242 S C N 243 N O N 244 N O N 245 R C N 246 N C N 247 N O N 248 S P N 249 N O N 250 N O N 251 N N N 252 R P N 253 N O N 254 N O N 255 N O N 256 N P N 257 N O N 258 N O N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N C N 283 N O N 284 N N N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N N N 297 S C N 298 N C N 299 N O N 300 N C N 301 N C N 302 N C N 303 N O N 304 N O N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N N N 316 N C N 317 N C N 318 N O N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 S C N 327 N C N 328 N O N 329 N C Y 330 N C Y 331 N N Y 332 N C Y 333 N C Y 334 N N N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N O N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 S C N 354 N C N 355 N C N 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C N 398 N C N 399 N C N 400 N C N 401 N N N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N N N 419 S C N 420 N C N 421 N O N 422 N C N 423 N C N 424 N S N 425 N C N 426 N O N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N MG N 439 N NA N 440 N N N 441 S C N 442 N C N 443 N O N 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C Y 449 N C Y 450 N C N 451 N O N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N N N 464 S C N 465 N C N 466 N O N 467 N C N 468 N C N 469 N C N 470 N O N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N N N 481 S C N 482 N C N 483 N O N 484 N C N 485 N O N 486 N O N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N N N 495 S C N 496 N C N 497 N O N 498 R C N 499 N O N 500 N C N 501 N O N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N N N 512 S C N 513 N C N 514 N O N 515 N C Y 516 N C Y 517 N C Y 518 N C Y 519 N N Y 520 N C Y 521 N C Y 522 N C Y 523 N C Y 524 N C N 525 N O N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N N N 539 S C N 540 N C N 541 N O N 542 N C Y 543 N C Y 544 N C Y 545 N C Y 546 N C Y 547 N C Y 548 N C N 549 N O N 550 N O N 551 N H N 552 N H N 553 N H N 554 N H N 555 N H N 556 N H N 557 N H N 558 N H N 559 N H N 560 N H N 561 N H N 562 N N N 563 S C N 564 N C N 565 N O N 566 N C N 567 N C N 568 N C N 569 N O N 570 N H N 571 N H N 572 N H N 573 N H N 574 N H N 575 N H N 576 N H N 577 N H N 578 N H N 579 N H N 580 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub Y 233 N sing Y 234 N sing Y 235 N doub N 236 N sing Y 237 N sing N 238 N sing Y 239 N sing N 240 N sing N 241 N doub Y 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing Y 334 N sing Y 335 N doub Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N sing N 439 N sing N 440 N sing N 441 N sing Y 442 N doub Y 443 N sing Y 444 N sing N 445 N sing Y 446 N doub N 447 N sing Y 448 N doub N 449 N sing Y 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N doub N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N doub N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N doub N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N doub N 507 N sing N 508 N sing N 509 N sing N 510 N sing Y 511 N doub Y 512 N sing Y 513 N sing N 514 N sing Y 515 N doub Y 516 N sing Y 517 N sing N 518 N sing Y 519 N sing Y 520 N doub N 521 N sing Y 522 N doub N 523 N sing Y 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N doub N 535 N sing N 536 N sing N 537 N sing N 538 N sing Y 539 N doub Y 540 N sing Y 541 N sing N 542 N sing Y 543 N doub N 544 N sing Y 545 N doub N 546 N sing Y 547 N sing N 548 N sing N 549 N sing N 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N doub N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 135 8078 8088 10.1021/ja403842j 23647366 Amino Acid Substitution in the Active Site of DNA Polymerase beta Explains the Energy Barrier of the Nucleotidyl Transfer Reaction. 2013 10.2210/pdb4jwm/pdb pdb_00004jwm 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200 1 Viramax CCD 2007-03-28 RIGAKU SATURN 92 Viramax SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU MICROMAX-007 HF 38255.699 DNA polymerase beta 2.7.7.7 D256E 1 man polymer 4853.158 DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') 1 syn polymer 3061.004 DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') 1 syn polymer 1536.035 DNA (5'-D(P*GP*TP*CP*GP*G)-3') 1 syn polymer 467.157 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE 1 syn non-polymer 24.305 MAGNESIUM ION 2 syn non-polymer 22.990 SODIUM ION 2 syn non-polymer 35.453 CHLORIDE ION 4 syn non-polymer 18.015 water 449 nat water no no MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIEIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIEIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE A polypeptide(L) no no (DC)(DC)(DG)(DA)(DC)(DA)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC) CCGACAGCGCATCAGC T polydeoxyribonucleotide no no (DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC) GCTGATGCGC P polydeoxyribonucleotide no no (DG)(DT)(DC)(DG)(DG) GTCGG D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample POLB 9606 Homo sapiens 562 Escherichia coli PLASMID pwl11 1 2.25 45.28 VAPOR DIFFUSION, SITTING DROP 7.5 50 mM Imidazole, 350 mM Sodium Acetate, 18 % PEG3350, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K 291 -11.290 1 19 T 1 D 5 -2.664 T_DC1:DG5_D 1 -9.984 -0.236 0.154 -0.098 0.828 1 19 T 2 D 4 1.130 T_DC2:DG4_D 2 -10.515 0.744 -0.016 -0.327 -3.296 1 19 T 3 D 3 3.086 T_DG3:DC3_D 3 -14.123 -0.144 0.081 -0.003 9.791 1 20 T 4 D 2 -3.851 T_DA4:DT2_D 4 -8.114 0.074 0.320 -0.082 16.478 1 19 T 5 D 1 -1.233 T_DC5:DG1_D 5 1.359 0.223 -0.293 -0.107 9.677 1 19 T 7 P 10 0.748 T_DG7:DC10_P 6 -0.264 -0.084 0.412 -0.084 14.792 1 19 T 8 P 9 -0.612 T_DC8:DG9_P 7 0.302 0.302 -0.421 -0.208 5.616 1 19 T 9 P 8 -1.118 T_DG9:DC8_P 8 -1.084 -0.404 -0.110 -0.274 4.313 1 19 T 10 P 7 -2.462 T_DC10:DG7_P 9 -6.384 0.375 0.130 -0.223 -5.995 1 20 T 11 P 6 4.173 T_DA11:DT6_P 10 -9.976 -0.080 0.023 -0.137 2.968 1 20 T 12 P 5 2.769 T_DT12:DA5_P 11 -9.402 -0.201 -0.076 0.100 -2.171 1 19 T 13 P 4 5.307 T_DC13:DG4_P 12 -14.012 0.677 0.001 -0.157 -0.191 1 20 T 14 P 3 -2.518 T_DA14:DT3_P 13 -7.944 -0.234 0.021 -0.083 8.644 1 19 T 15 P 2 0.545 T_DG15:DC2_P 14 -11.224 -0.309 0.428 -0.191 10.029 1 19 T 16 P 1 0.992 T_DC16:DG1_P 15 -13.732 0.542 0.414 -0.333 3.210 36.051 T T 1 2 15.443 D D 5 4 3.107 9.444 0.139 0.800 TT_DC1DC2:DG4DG5_DD 1 2.774 -4.536 34.724 -0.026 0.163 3.430 37.792 T T 2 3 0.482 D D 4 3 3.440 0.312 0.391 2.145 TT_DC2DG3:DC3DG4_DD 2 -2.171 3.353 37.730 3.269 -0.898 2.901 32.102 T T 3 4 1.817 D D 3 2 2.882 1.003 -0.406 -0.181 TT_DG3DA4:DT2DC3_DD 3 -3.064 5.550 31.944 -0.487 0.247 3.266 28.541 T T 4 5 7.702 D D 2 1 3.236 3.761 0.976 -0.559 TT_DA4DC5:DG1DT2_DD 4 5.780 -11.837 27.712 -1.998 -0.652 3.334 35.265 T T 7 8 3.856 P P 10 9 3.324 2.325 0.665 -0.717 TT_DG7DC8:DG9DC10_PP 5 5.553 -9.209 34.763 -1.537 -0.254 3.559 34.255 T T 8 9 12.311 P P 9 8 3.586 7.184 -1.285 -0.361 TT_DC8DG9:DC8DG9_PP 6 -4.004 6.861 33.282 -1.866 1.482 3.378 33.588 T T 9 10 6.016 P P 8 7 3.431 3.468 -0.579 -0.642 TT_DG9DC10:DG7DC8_PP 7 -2.093 3.631 33.350 -1.705 0.644 3.303 37.814 T T 10 11 10.029 P P 7 6 3.424 6.469 0.156 -0.465 TT_DC10DA11:DT6DG7_PP 8 0.753 -1.168 37.269 -1.580 -0.141 3.074 28.705 T T 11 12 -1.099 P P 6 5 3.062 -0.545 -0.072 -0.609 TT_DA11DT12:DA5DT6_PP 9 -0.326 0.657 28.698 -1.114 0.077 3.379 39.998 T T 12 13 1.466 P P 5 4 3.360 1.002 0.500 -0.096 TT_DT12DC13:DG4DA5_PP 10 2.286 -3.343 39.923 -0.258 -0.460 3.153 33.136 T T 13 14 16.611 P P 4 3 3.261 9.351 -0.685 0.098 TT_DC13DA14:DT3DG4_PP 11 0.453 -0.805 31.821 -1.405 1.277 2.886 32.041 T T 14 15 9.993 P P 3 2 3.052 5.468 0.317 -0.230 TT_DA14DG15:DC2DT3_PP 12 -5.069 9.264 31.184 -1.323 -1.415 3.135 38.227 T T 15 16 5.786 P P 2 1 3.214 3.784 0.566 -0.645 TT_DG15DC16:DG1DC2_PP 13 -0.202 0.309 38.045 -1.447 -0.889 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2013-06-26 1 1 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2013-03-27 REL REL DUP 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE MG MAGNESIUM ION NA SODIUM ION CL CHLORIDE ION HOH water 2FMS PDB entry 2FMS PDB experimental model DUP 338 5 DUP DUP 401 A MG 339 6 MG MG 402 A MG 340 6 MG MG 403 A NA 341 7 NA NA 404 A NA 342 7 NA NA 405 A CL 343 8 CL CL 406 A CL 344 8 CL CL 407 A CL 345 8 CL CL 408 A CL 346 8 CL CL 409 A HOH 0 9 HOH HOH 501 A HOH 1 9 HOH HOH 502 A HOH 4 9 HOH HOH 503 A HOH 5 9 HOH HOH 504 A HOH 6 9 HOH HOH 505 A HOH 7 9 HOH HOH 506 A HOH 9 9 HOH HOH 507 A HOH 10 9 HOH HOH 508 A HOH 11 9 HOH HOH 509 A HOH 12 9 HOH HOH 510 A HOH 13 9 HOH HOH 511 A HOH 14 9 HOH HOH 512 A HOH 15 9 HOH HOH 513 A HOH 16 9 HOH HOH 514 A HOH 17 9 HOH HOH 515 A HOH 18 9 HOH HOH 516 A HOH 19 9 HOH HOH 517 A HOH 20 9 HOH HOH 518 A HOH 21 9 HOH HOH 519 A HOH 22 9 HOH HOH 520 A HOH 23 9 HOH HOH 521 A HOH 24 9 HOH HOH 522 A HOH 25 9 HOH HOH 523 A HOH 26 9 HOH HOH 524 A HOH 27 9 HOH HOH 525 A HOH 28 9 HOH HOH 526 A HOH 32 9 HOH HOH 527 A HOH 33 9 HOH HOH 528 A HOH 34 9 HOH HOH 529 A HOH 35 9 HOH HOH 530 A HOH 36 9 HOH HOH 531 A HOH 38 9 HOH HOH 532 A HOH 40 9 HOH HOH 533 A HOH 41 9 HOH HOH 534 A HOH 42 9 HOH HOH 535 A HOH 43 9 HOH HOH 536 A HOH 44 9 HOH HOH 537 A HOH 45 9 HOH HOH 538 A HOH 46 9 HOH HOH 539 A HOH 47 9 HOH HOH 540 A HOH 48 9 HOH HOH 541 A HOH 49 9 HOH HOH 542 A HOH 50 9 HOH HOH 543 A HOH 51 9 HOH HOH 544 A HOH 52 9 HOH HOH 545 A HOH 53 9 HOH HOH 546 A HOH 54 9 HOH HOH 547 A HOH 56 9 HOH HOH 548 A HOH 58 9 HOH HOH 549 A HOH 59 9 HOH HOH 550 A HOH 60 9 HOH HOH 551 A HOH 61 9 HOH HOH 552 A HOH 62 9 HOH HOH 553 A HOH 63 9 HOH HOH 554 A HOH 65 9 HOH HOH 555 A HOH 66 9 HOH HOH 556 A HOH 67 9 HOH HOH 557 A HOH 68 9 HOH HOH 558 A HOH 70 9 HOH HOH 559 A HOH 72 9 HOH HOH 560 A HOH 73 9 HOH HOH 561 A HOH 74 9 HOH HOH 562 A HOH 76 9 HOH HOH 563 A HOH 77 9 HOH HOH 564 A HOH 78 9 HOH HOH 565 A HOH 79 9 HOH HOH 566 A HOH 81 9 HOH HOH 567 A HOH 82 9 HOH HOH 568 A HOH 83 9 HOH HOH 569 A HOH 84 9 HOH HOH 570 A HOH 85 9 HOH HOH 571 A HOH 86 9 HOH HOH 572 A HOH 88 9 HOH HOH 573 A HOH 89 9 HOH HOH 574 A HOH 90 9 HOH HOH 575 A HOH 91 9 HOH HOH 576 A HOH 92 9 HOH HOH 577 A HOH 94 9 HOH HOH 578 A HOH 96 9 HOH HOH 579 A HOH 97 9 HOH HOH 580 A HOH 98 9 HOH HOH 581 A HOH 100 9 HOH HOH 582 A HOH 101 9 HOH HOH 583 A HOH 102 9 HOH HOH 584 A HOH 103 9 HOH HOH 585 A HOH 104 9 HOH HOH 586 A HOH 105 9 HOH HOH 587 A HOH 106 9 HOH HOH 588 A HOH 107 9 HOH HOH 589 A HOH 108 9 HOH HOH 590 A HOH 109 9 HOH HOH 591 A HOH 110 9 HOH HOH 592 A HOH 111 9 HOH HOH 593 A HOH 112 9 HOH HOH 594 A HOH 113 9 HOH HOH 595 A HOH 114 9 HOH HOH 596 A HOH 115 9 HOH HOH 597 A HOH 116 9 HOH HOH 598 A HOH 117 9 HOH HOH 599 A HOH 118 9 HOH HOH 600 A HOH 119 9 HOH HOH 601 A HOH 120 9 HOH HOH 602 A HOH 121 9 HOH HOH 603 A HOH 123 9 HOH HOH 604 A HOH 124 9 HOH HOH 605 A HOH 125 9 HOH HOH 606 A HOH 126 9 HOH HOH 607 A HOH 128 9 HOH HOH 608 A HOH 129 9 HOH HOH 609 A HOH 130 9 HOH HOH 610 A HOH 132 9 HOH HOH 611 A HOH 133 9 HOH HOH 612 A HOH 135 9 HOH HOH 613 A HOH 136 9 HOH HOH 614 A HOH 137 9 HOH HOH 615 A HOH 138 9 HOH HOH 616 A HOH 139 9 HOH HOH 617 A HOH 140 9 HOH HOH 618 A HOH 142 9 HOH HOH 619 A HOH 143 9 HOH HOH 620 A HOH 144 9 HOH HOH 621 A HOH 145 9 HOH HOH 622 A HOH 146 9 HOH HOH 623 A HOH 147 9 HOH HOH 624 A HOH 151 9 HOH HOH 625 A HOH 152 9 HOH HOH 626 A HOH 153 9 HOH HOH 627 A HOH 155 9 HOH HOH 628 A HOH 156 9 HOH HOH 629 A HOH 157 9 HOH HOH 630 A HOH 158 9 HOH HOH 631 A HOH 159 9 HOH HOH 632 A HOH 160 9 HOH HOH 633 A HOH 161 9 HOH HOH 634 A HOH 162 9 HOH HOH 635 A HOH 163 9 HOH HOH 636 A HOH 165 9 HOH HOH 637 A HOH 167 9 HOH HOH 638 A HOH 169 9 HOH HOH 639 A HOH 170 9 HOH HOH 640 A HOH 171 9 HOH HOH 641 A HOH 172 9 HOH HOH 642 A HOH 173 9 HOH HOH 643 A HOH 174 9 HOH HOH 644 A HOH 175 9 HOH HOH 645 A HOH 176 9 HOH HOH 646 A HOH 178 9 HOH HOH 647 A HOH 179 9 HOH HOH 648 A HOH 180 9 HOH HOH 649 A HOH 182 9 HOH HOH 650 A HOH 184 9 HOH HOH 651 A HOH 185 9 HOH HOH 652 A HOH 188 9 HOH HOH 653 A HOH 189 9 HOH HOH 654 A HOH 190 9 HOH HOH 655 A HOH 191 9 HOH HOH 656 A HOH 193 9 HOH HOH 657 A HOH 194 9 HOH HOH 658 A HOH 195 9 HOH HOH 659 A HOH 199 9 HOH HOH 660 A HOH 200 9 HOH HOH 661 A HOH 201 9 HOH HOH 662 A HOH 202 9 HOH HOH 663 A HOH 203 9 HOH HOH 664 A HOH 204 9 HOH HOH 665 A HOH 205 9 HOH HOH 666 A HOH 206 9 HOH HOH 667 A HOH 207 9 HOH HOH 668 A HOH 208 9 HOH HOH 669 A HOH 209 9 HOH HOH 670 A HOH 210 9 HOH HOH 671 A HOH 212 9 HOH HOH 672 A HOH 213 9 HOH HOH 673 A HOH 216 9 HOH HOH 674 A HOH 217 9 HOH HOH 675 A HOH 218 9 HOH HOH 676 A HOH 220 9 HOH HOH 677 A HOH 221 9 HOH HOH 678 A HOH 222 9 HOH HOH 679 A HOH 223 9 HOH HOH 680 A HOH 224 9 HOH HOH 681 A HOH 227 9 HOH HOH 682 A HOH 228 9 HOH HOH 683 A HOH 229 9 HOH HOH 684 A HOH 230 9 HOH HOH 685 A HOH 231 9 HOH HOH 686 A HOH 232 9 HOH HOH 687 A HOH 233 9 HOH HOH 688 A HOH 234 9 HOH HOH 689 A HOH 235 9 HOH HOH 690 A HOH 236 9 HOH HOH 691 A HOH 237 9 HOH HOH 692 A HOH 238 9 HOH HOH 693 A HOH 239 9 HOH HOH 694 A HOH 240 9 HOH HOH 695 A HOH 241 9 HOH HOH 696 A HOH 242 9 HOH HOH 697 A HOH 243 9 HOH HOH 698 A HOH 244 9 HOH HOH 699 A HOH 245 9 HOH HOH 700 A HOH 246 9 HOH HOH 701 A HOH 247 9 HOH HOH 702 A HOH 248 9 HOH HOH 703 A HOH 249 9 HOH HOH 704 A HOH 250 9 HOH HOH 705 A HOH 251 9 HOH HOH 706 A HOH 252 9 HOH HOH 707 A HOH 253 9 HOH HOH 708 A HOH 255 9 HOH HOH 709 A HOH 259 9 HOH HOH 710 A HOH 260 9 HOH HOH 711 A HOH 261 9 HOH HOH 712 A HOH 262 9 HOH HOH 713 A HOH 263 9 HOH HOH 714 A HOH 264 9 HOH HOH 715 A HOH 265 9 HOH HOH 716 A HOH 267 9 HOH HOH 717 A HOH 268 9 HOH HOH 718 A HOH 269 9 HOH HOH 719 A HOH 270 9 HOH HOH 720 A HOH 271 9 HOH HOH 721 A HOH 272 9 HOH HOH 722 A HOH 273 9 HOH HOH 723 A HOH 274 9 HOH HOH 724 A HOH 275 9 HOH HOH 725 A HOH 277 9 HOH HOH 726 A HOH 278 9 HOH HOH 727 A HOH 279 9 HOH HOH 728 A HOH 280 9 HOH HOH 729 A HOH 281 9 HOH HOH 730 A HOH 282 9 HOH HOH 731 A HOH 283 9 HOH HOH 732 A HOH 284 9 HOH HOH 733 A HOH 285 9 HOH HOH 734 A HOH 286 9 HOH HOH 735 A HOH 287 9 HOH HOH 736 A HOH 288 9 HOH HOH 737 A HOH 289 9 HOH HOH 738 A HOH 290 9 HOH HOH 739 A HOH 294 9 HOH HOH 740 A HOH 295 9 HOH HOH 741 A HOH 296 9 HOH HOH 742 A HOH 297 9 HOH HOH 743 A HOH 298 9 HOH HOH 744 A HOH 299 9 HOH HOH 745 A HOH 300 9 HOH HOH 746 A HOH 301 9 HOH HOH 747 A HOH 303 9 HOH HOH 748 A HOH 304 9 HOH HOH 749 A HOH 305 9 HOH HOH 750 A HOH 306 9 HOH HOH 751 A HOH 307 9 HOH HOH 752 A HOH 308 9 HOH HOH 753 A HOH 309 9 HOH HOH 754 A HOH 310 9 HOH HOH 755 A HOH 311 9 HOH HOH 756 A HOH 312 9 HOH HOH 757 A HOH 316 9 HOH HOH 758 A HOH 317 9 HOH HOH 759 A HOH 318 9 HOH HOH 760 A HOH 319 9 HOH HOH 761 A HOH 320 9 HOH HOH 762 A HOH 323 9 HOH HOH 763 A HOH 324 9 HOH HOH 764 A HOH 327 9 HOH HOH 765 A HOH 328 9 HOH HOH 766 A HOH 329 9 HOH HOH 767 A HOH 330 9 HOH HOH 768 A HOH 331 9 HOH HOH 769 A HOH 332 9 HOH HOH 770 A HOH 333 9 HOH HOH 771 A HOH 334 9 HOH HOH 772 A HOH 335 9 HOH HOH 773 A HOH 336 9 HOH HOH 774 A HOH 337 9 HOH HOH 775 A HOH 338 9 HOH HOH 776 A HOH 339 9 HOH HOH 777 A HOH 340 9 HOH HOH 778 A HOH 341 9 HOH HOH 779 A HOH 342 9 HOH HOH 780 A HOH 347 9 HOH HOH 781 A HOH 348 9 HOH HOH 782 A HOH 349 9 HOH HOH 783 A HOH 351 9 HOH HOH 784 A HOH 352 9 HOH HOH 785 A HOH 359 9 HOH HOH 786 A HOH 360 9 HOH HOH 787 A HOH 361 9 HOH HOH 788 A HOH 365 9 HOH HOH 789 A HOH 366 9 HOH HOH 790 A HOH 367 9 HOH HOH 791 A HOH 370 9 HOH HOH 792 A HOH 371 9 HOH HOH 793 A HOH 372 9 HOH HOH 794 A HOH 373 9 HOH HOH 795 A HOH 374 9 HOH HOH 796 A HOH 376 9 HOH HOH 797 A HOH 377 9 HOH HOH 798 A HOH 378 9 HOH HOH 799 A HOH 379 9 HOH HOH 800 A HOH 382 9 HOH HOH 801 A HOH 383 9 HOH HOH 802 A HOH 384 9 HOH HOH 803 A HOH 385 9 HOH HOH 804 A HOH 386 9 HOH HOH 805 A HOH 387 9 HOH HOH 806 A HOH 388 9 HOH HOH 807 A HOH 389 9 HOH HOH 808 A HOH 390 9 HOH HOH 809 A HOH 391 9 HOH HOH 810 A HOH 392 9 HOH HOH 811 A HOH 393 9 HOH HOH 812 A HOH 394 9 HOH HOH 813 A HOH 395 9 HOH HOH 814 A HOH 396 9 HOH HOH 815 A HOH 397 9 HOH HOH 816 A HOH 398 9 HOH HOH 817 A HOH 399 9 HOH HOH 818 A HOH 400 9 HOH HOH 819 A HOH 401 9 HOH HOH 820 A HOH 402 9 HOH HOH 821 A HOH 403 9 HOH HOH 822 A HOH 404 9 HOH HOH 823 A HOH 405 9 HOH HOH 824 A HOH 408 9 HOH HOH 825 A HOH 409 9 HOH HOH 826 A HOH 411 9 HOH HOH 827 A HOH 412 9 HOH HOH 828 A HOH 413 9 HOH HOH 829 A HOH 415 9 HOH HOH 830 A HOH 416 9 HOH HOH 831 A HOH 417 9 HOH HOH 832 A HOH 418 9 HOH HOH 833 A HOH 419 9 HOH HOH 834 A HOH 420 9 HOH HOH 835 A HOH 421 9 HOH HOH 836 A HOH 422 9 HOH HOH 837 A HOH 423 9 HOH HOH 838 A HOH 424 9 HOH HOH 839 A HOH 425 9 HOH HOH 840 A HOH 426 9 HOH HOH 841 A HOH 427 9 HOH HOH 842 A HOH 428 9 HOH HOH 843 A HOH 430 9 HOH HOH 844 A HOH 431 9 HOH HOH 845 A HOH 432 9 HOH HOH 846 A HOH 433 9 HOH HOH 847 A HOH 434 9 HOH HOH 848 A HOH 435 9 HOH HOH 849 A HOH 437 9 HOH HOH 850 A HOH 438 9 HOH HOH 851 A HOH 440 9 HOH HOH 852 A HOH 441 9 HOH HOH 853 A HOH 443 9 HOH HOH 854 A HOH 444 9 HOH HOH 855 A HOH 445 9 HOH HOH 856 A HOH 446 9 HOH HOH 857 A HOH 448 9 HOH HOH 858 A HOH 55 9 HOH HOH 859 A HOH 3 9 HOH HOH 101 T HOH 8 9 HOH HOH 102 T HOH 31 9 HOH HOH 103 T HOH 37 9 HOH HOH 104 T HOH 39 9 HOH HOH 105 T HOH 64 9 HOH HOH 106 T HOH 69 9 HOH HOH 107 T HOH 71 9 HOH HOH 108 T HOH 75 9 HOH HOH 109 T HOH 93 9 HOH HOH 110 T HOH 95 9 HOH HOH 111 T HOH 99 9 HOH HOH 112 T HOH 122 9 HOH HOH 113 T HOH 134 9 HOH HOH 114 T HOH 141 9 HOH HOH 115 T HOH 149 9 HOH HOH 116 T HOH 177 9 HOH HOH 117 T HOH 181 9 HOH HOH 118 T HOH 183 9 HOH HOH 119 T HOH 187 9 HOH HOH 120 T HOH 192 9 HOH HOH 121 T HOH 197 9 HOH HOH 122 T HOH 214 9 HOH HOH 123 T HOH 215 9 HOH HOH 124 T HOH 219 9 HOH HOH 125 T HOH 225 9 HOH HOH 126 T HOH 226 9 HOH HOH 127 T HOH 254 9 HOH HOH 128 T HOH 256 9 HOH HOH 129 T HOH 257 9 HOH HOH 130 T HOH 266 9 HOH HOH 131 T HOH 276 9 HOH HOH 132 T HOH 291 9 HOH HOH 133 T HOH 292 9 HOH HOH 134 T HOH 293 9 HOH HOH 135 T HOH 302 9 HOH HOH 136 T HOH 326 9 HOH HOH 137 T HOH 344 9 HOH HOH 138 T HOH 350 9 HOH HOH 139 T HOH 354 9 HOH HOH 140 T HOH 355 9 HOH HOH 141 T HOH 356 9 HOH HOH 142 T HOH 362 9 HOH HOH 143 T HOH 363 9 HOH HOH 144 T HOH 364 9 HOH HOH 145 T HOH 368 9 HOH HOH 146 T HOH 369 9 HOH HOH 147 T HOH 375 9 HOH HOH 148 T HOH 407 9 HOH HOH 149 T HOH 414 9 HOH HOH 150 T HOH 429 9 HOH HOH 151 T HOH 439 9 HOH HOH 152 T HOH 447 9 HOH HOH 153 T HOH 2 9 HOH HOH 101 P HOH 29 9 HOH HOH 102 P HOH 30 9 HOH HOH 103 P HOH 57 9 HOH HOH 104 P HOH 80 9 HOH HOH 105 P HOH 127 9 HOH HOH 106 P HOH 150 9 HOH HOH 107 P HOH 164 9 HOH HOH 108 P HOH 166 9 HOH HOH 109 P HOH 186 9 HOH HOH 110 P HOH 196 9 HOH HOH 111 P HOH 198 9 HOH HOH 112 P HOH 211 9 HOH HOH 113 P HOH 313 9 HOH HOH 114 P HOH 314 9 HOH HOH 115 P HOH 315 9 HOH HOH 116 P HOH 325 9 HOH HOH 117 P HOH 343 9 HOH HOH 118 P HOH 345 9 HOH HOH 119 P HOH 346 9 HOH HOH 120 P HOH 353 9 HOH HOH 121 P HOH 358 9 HOH HOH 122 P HOH 380 9 HOH HOH 123 P HOH 381 9 HOH HOH 124 P HOH 406 9 HOH HOH 125 P HOH 436 9 HOH HOH 126 P HOH 442 9 HOH HOH 127 P HOH 87 9 HOH HOH 101 D HOH 131 9 HOH HOH 102 D HOH 148 9 HOH HOH 103 D HOH 154 9 HOH HOH 104 D HOH 168 9 HOH HOH 105 D HOH 258 9 HOH HOH 106 D HOH 321 9 HOH HOH 107 D HOH 322 9 HOH HOH 108 D HOH 357 9 HOH HOH 109 D HOH 410 9 HOH HOH 110 D n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A THR 10 n 10 THR 10 A LEU 11 n 11 LEU 11 A ASN 12 n 12 ASN 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A ILE 15 n 15 ILE 15 A THR 16 n 16 THR 16 A ASP 17 n 17 ASP 17 A MET 18 n 18 MET 18 A LEU 19 n 19 LEU 19 A THR 20 n 20 THR 20 A GLU 21 n 21 GLU 21 A LEU 22 n 22 LEU 22 A ALA 23 n 23 ALA 23 A ASN 24 n 24 ASN 24 A PHE 25 n 25 PHE 25 A GLU 26 n 26 GLU 26 A LYS 27 n 27 LYS 27 A ASN 28 n 28 ASN 28 A VAL 29 n 29 VAL 29 A SER 30 n 30 SER 30 A GLN 31 n 31 GLN 31 A ALA 32 n 32 ALA 32 A ILE 33 n 33 ILE 33 A HIS 34 n 34 HIS 34 A LYS 35 n 35 LYS 35 A TYR 36 n 36 TYR 36 A ASN 37 n 37 ASN 37 A ALA 38 n 38 ALA 38 A TYR 39 n 39 TYR 39 A ARG 40 n 40 ARG 40 A LYS 41 n 41 LYS 41 A ALA 42 n 42 ALA 42 A ALA 43 n 43 ALA 43 A SER 44 n 44 SER 44 A VAL 45 n 45 VAL 45 A ILE 46 n 46 ILE 46 A ALA 47 n 47 ALA 47 A LYS 48 n 48 LYS 48 A TYR 49 n 49 TYR 49 A PRO 50 n 50 PRO 50 A HIS 51 n 51 HIS 51 A LYS 52 n 52 LYS 52 A ILE 53 n 53 ILE 53 A LYS 54 n 54 LYS 54 A SER 55 n 55 SER 55 A GLY 56 n 56 GLY 56 A ALA 57 n 57 ALA 57 A GLU 58 n 58 GLU 58 A ALA 59 n 59 ALA 59 A LYS 60 n 60 LYS 60 A LYS 61 n 61 LYS 61 A LEU 62 n 62 LEU 62 A PRO 63 n 63 PRO 63 A GLY 64 n 64 GLY 64 A VAL 65 n 65 VAL 65 A GLY 66 n 66 GLY 66 A THR 67 n 67 THR 67 A LYS 68 n 68 LYS 68 A ILE 69 n 69 ILE 69 A ALA 70 n 70 ALA 70 A GLU 71 n 71 GLU 71 A LYS 72 n 72 LYS 72 A ILE 73 n 73 ILE 73 A ASP 74 n 74 ASP 74 A GLU 75 n 75 GLU 75 A PHE 76 n 76 PHE 76 A LEU 77 n 77 LEU 77 A ALA 78 n 78 ALA 78 A THR 79 n 79 THR 79 A GLY 80 n 80 GLY 80 A LYS 81 n 81 LYS 81 A LEU 82 n 82 LEU 82 A ARG 83 n 83 ARG 83 A LYS 84 n 84 LYS 84 A LEU 85 n 85 LEU 85 A GLU 86 n 86 GLU 86 A LYS 87 n 87 LYS 87 A ILE 88 n 88 ILE 88 A ARG 89 n 89 ARG 89 A GLN 90 n 90 GLN 90 A ASP 91 n 91 ASP 91 A ASP 92 n 92 ASP 92 A THR 93 n 93 THR 93 A SER 94 n 94 SER 94 A SER 95 n 95 SER 95 A SER 96 n 96 SER 96 A ILE 97 n 97 ILE 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A LEU 100 n 100 LEU 100 A THR 101 n 101 THR 101 A ARG 102 n 102 ARG 102 A VAL 103 n 103 VAL 103 A SER 104 n 104 SER 104 A GLY 105 n 105 GLY 105 A ILE 106 n 106 ILE 106 A GLY 107 n 107 GLY 107 A PRO 108 n 108 PRO 108 A SER 109 n 109 SER 109 A ALA 110 n 110 ALA 110 A ALA 111 n 111 ALA 111 A ARG 112 n 112 ARG 112 A LYS 113 n 113 LYS 113 A PHE 114 n 114 PHE 114 A VAL 115 n 115 VAL 115 A ASP 116 n 116 ASP 116 A GLU 117 n 117 GLU 117 A GLY 118 n 118 GLY 118 A ILE 119 n 119 ILE 119 A LYS 120 n 120 LYS 120 A THR 121 n 121 THR 121 A LEU 122 n 122 LEU 122 A GLU 123 n 123 GLU 123 A ASP 124 n 124 ASP 124 A LEU 125 n 125 LEU 125 A ARG 126 n 126 ARG 126 A LYS 127 n 127 LYS 127 A ASN 128 n 128 ASN 128 A GLU 129 n 129 GLU 129 A ASP 130 n 130 ASP 130 A LYS 131 n 131 LYS 131 A LEU 132 n 132 LEU 132 A ASN 133 n 133 ASN 133 A HIS 134 n 134 HIS 134 A HIS 135 n 135 HIS 135 A GLN 136 n 136 GLN 136 A ARG 137 n 137 ARG 137 A ILE 138 n 138 ILE 138 A GLY 139 n 139 GLY 139 A LEU 140 n 140 LEU 140 A LYS 141 n 141 LYS 141 A TYR 142 n 142 TYR 142 A PHE 143 n 143 PHE 143 A GLY 144 n 144 GLY 144 A ASP 145 n 145 ASP 145 A PHE 146 n 146 PHE 146 A GLU 147 n 147 GLU 147 A LYS 148 n 148 LYS 148 A ARG 149 n 149 ARG 149 A ILE 150 n 150 ILE 150 A PRO 151 n 151 PRO 151 A ARG 152 n 152 ARG 152 A GLU 153 n 153 GLU 153 A GLU 154 n 154 GLU 154 A MET 155 n 155 MET 155 A LEU 156 n 156 LEU 156 A GLN 157 n 157 GLN 157 A MET 158 n 158 MET 158 A GLN 159 n 159 GLN 159 A ASP 160 n 160 ASP 160 A ILE 161 n 161 ILE 161 A VAL 162 n 162 VAL 162 A LEU 163 n 163 LEU 163 A ASN 164 n 164 ASN 164 A GLU 165 n 165 GLU 165 A VAL 166 n 166 VAL 166 A LYS 167 n 167 LYS 167 A LYS 168 n 168 LYS 168 A VAL 169 n 169 VAL 169 A ASP 170 n 170 ASP 170 A SER 171 n 171 SER 171 A GLU 172 n 172 GLU 172 A TYR 173 n 173 TYR 173 A ILE 174 n 174 ILE 174 A ALA 175 n 175 ALA 175 A THR 176 n 176 THR 176 A VAL 177 n 177 VAL 177 A CYS 178 n 178 CYS 178 A GLY 179 n 179 GLY 179 A SER 180 n 180 SER 180 A PHE 181 n 181 PHE 181 A ARG 182 n 182 ARG 182 A ARG 183 n 183 ARG 183 A GLY 184 n 184 GLY 184 A ALA 185 n 185 ALA 185 A GLU 186 n 186 GLU 186 A SER 187 n 187 SER 187 A SER 188 n 188 SER 188 A GLY 189 n 189 GLY 189 A ASP 190 n 190 ASP 190 A MET 191 n 191 MET 191 A ASP 192 n 192 ASP 192 A VAL 193 n 193 VAL 193 A LEU 194 n 194 LEU 194 A LEU 195 n 195 LEU 195 A THR 196 n 196 THR 196 A HIS 197 n 197 HIS 197 A PRO 198 n 198 PRO 198 A SER 199 n 199 SER 199 A PHE 200 n 200 PHE 200 A THR 201 n 201 THR 201 A SER 202 n 202 SER 202 A GLU 203 n 203 GLU 203 A SER 204 n 204 SER 204 A THR 205 n 205 THR 205 A LYS 206 n 206 LYS 206 A GLN 207 n 207 GLN 207 A PRO 208 n 208 PRO 208 A LYS 209 n 209 LYS 209 A LEU 210 n 210 LEU 210 A LEU 211 n 211 LEU 211 A HIS 212 n 212 HIS 212 A GLN 213 n 213 GLN 213 A VAL 214 n 214 VAL 214 A VAL 215 n 215 VAL 215 A GLU 216 n 216 GLU 216 A GLN 217 n 217 GLN 217 A LEU 218 n 218 LEU 218 A GLN 219 n 219 GLN 219 A LYS 220 n 220 LYS 220 A VAL 221 n 221 VAL 221 A HIS 222 n 222 HIS 222 A PHE 223 n 223 PHE 223 A ILE 224 n 224 ILE 224 A THR 225 n 225 THR 225 A ASP 226 n 226 ASP 226 A THR 227 n 227 THR 227 A LEU 228 n 228 LEU 228 A SER 229 n 229 SER 229 A LYS 230 n 230 LYS 230 A GLY 231 n 231 GLY 231 A GLU 232 n 232 GLU 232 A THR 233 n 233 THR 233 A LYS 234 n 234 LYS 234 A PHE 235 n 235 PHE 235 A MET 236 n 236 MET 236 A GLY 237 n 237 GLY 237 A VAL 238 n 238 VAL 238 A CYS 239 n 239 CYS 239 A GLN 240 n 240 GLN 240 A LEU 241 n 241 LEU 241 A PRO 242 n 242 PRO 242 A SER 243 n 243 SER 243 A LYS 244 n 244 LYS 244 A ASN 245 n 245 ASN 245 A ASP 246 n 246 ASP 246 A GLU 247 n 247 GLU 247 A LYS 248 n 248 LYS 248 A GLU 249 n 249 GLU 249 A TYR 250 n 250 TYR 250 A PRO 251 n 251 PRO 251 A HIS 252 n 252 HIS 252 A ARG 253 n 253 ARG 253 A ARG 254 n 254 ARG 254 A ILE 255 n 255 ILE 255 A GLU 256 n 256 GLU 256 A ILE 257 n 257 ILE 257 A ARG 258 n 258 ARG 258 A LEU 259 n 259 LEU 259 A ILE 260 n 260 ILE 260 A PRO 261 n 261 PRO 261 A LYS 262 n 262 LYS 262 A ASP 263 n 263 ASP 263 A GLN 264 n 264 GLN 264 A TYR 265 n 265 TYR 265 A TYR 266 n 266 TYR 266 A CYS 267 n 267 CYS 267 A GLY 268 n 268 GLY 268 A VAL 269 n 269 VAL 269 A LEU 270 n 270 LEU 270 A TYR 271 n 271 TYR 271 A PHE 272 n 272 PHE 272 A THR 273 n 273 THR 273 A GLY 274 n 274 GLY 274 A SER 275 n 275 SER 275 A ASP 276 n 276 ASP 276 A ILE 277 n 277 ILE 277 A PHE 278 n 278 PHE 278 A ASN 279 n 279 ASN 279 A LYS 280 n 280 LYS 280 A ASN 281 n 281 ASN 281 A MET 282 n 282 MET 282 A ARG 283 n 283 ARG 283 A ALA 284 n 284 ALA 284 A HIS 285 n 285 HIS 285 A ALA 286 n 286 ALA 286 A LEU 287 n 287 LEU 287 A GLU 288 n 288 GLU 288 A LYS 289 n 289 LYS 289 A GLY 290 n 290 GLY 290 A PHE 291 n 291 PHE 291 A THR 292 n 292 THR 292 A ILE 293 n 293 ILE 293 A ASN 294 n 294 ASN 294 A GLU 295 n 295 GLU 295 A TYR 296 n 296 TYR 296 A THR 297 n 297 THR 297 A ILE 298 n 298 ILE 298 A ARG 299 n 299 ARG 299 A PRO 300 n 300 PRO 300 A LEU 301 n 301 LEU 301 A GLY 302 n 302 GLY 302 A VAL 303 n 303 VAL 303 A THR 304 n 304 THR 304 A GLY 305 n 305 GLY 305 A VAL 306 n 306 VAL 306 A ALA 307 n 307 ALA 307 A GLY 308 n 308 GLY 308 A GLU 309 n 309 GLU 309 A PRO 310 n 310 PRO 310 A LEU 311 n 311 LEU 311 A PRO 312 n 312 PRO 312 A VAL 313 n 313 VAL 313 A ASP 314 n 314 ASP 314 A SER 315 n 315 SER 315 A GLU 316 n 316 GLU 316 A LYS 317 n 317 LYS 317 A ASP 318 n 318 ASP 318 A ILE 319 n 319 ILE 319 A PHE 320 n 320 PHE 320 A ASP 321 n 321 ASP 321 A TYR 322 n 322 TYR 322 A ILE 323 n 323 ILE 323 A GLN 324 n 324 GLN 324 A TRP 325 n 325 TRP 325 A LYS 326 n 326 LYS 326 A TYR 327 n 327 TYR 327 A ARG 328 n 328 ARG 328 A GLU 329 n 329 GLU 329 A PRO 330 n 330 PRO 330 A LYS 331 n 331 LYS 331 A ASP 332 n 332 ASP 332 A ARG 333 n 333 ARG 333 A SER 334 n 334 SER 334 A GLU 335 n 335 GLU 335 A DC 1 n 1 DC 1 T DC 2 n 2 DC 2 T DG 3 n 3 DG 3 T DA 4 n 4 DA 4 T DC 5 n 5 DC 5 T DA 6 n 6 DA 6 T DG 7 n 7 DG 7 T DC 8 n 8 DC 8 T DG 9 n 9 DG 9 T DC 10 n 10 DC 10 T DA 11 n 11 DA 11 T DT 12 n 12 DT 12 T DC 13 n 13 DC 13 T DA 14 n 14 DA 14 T DG 15 n 15 DG 15 T DC 16 n 16 DC 16 T DG 1 n 1 DG 1 P DC 2 n 2 DC 2 P DT 3 n 3 DT 3 P DG 4 n 4 DG 4 P DA 5 n 5 DA 5 P DT 6 n 6 DT 6 P DG 7 n 7 DG 7 P DC 8 n 8 DC 8 P DG 9 n 9 DG 9 P DC 10 n 10 DC 10 P DG 1 n 1 DG 1 D DT 2 n 2 DT 2 D DC 3 n 3 DC 3 D DG 4 n 4 DG 4 D DG 5 n 5 DG 5 D author_and_software_defined_assembly PISA 4 tetrameric 6340 -115 19990 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 A LEU 62 A O LEU 62 1_555 90.6 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 A VAL 65 A O VAL 65 1_555 90.5 A LEU 62 A O LEU 62 1_555 A NA 405 I NA NA 1_555 A VAL 65 A O VAL 65 1_555 99.3 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 A HOH 644 N O HOH 1_555 88.7 A LEU 62 A O LEU 62 1_555 A NA 405 I NA NA 1_555 A HOH 644 N O HOH 1_555 73.1 A VAL 65 A O VAL 65 1_555 A NA 405 I NA NA 1_555 A HOH 644 N O HOH 1_555 172.4 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 D DC 3 D OP1 DC 3 1_555 171.0 A LEU 62 A O LEU 62 1_555 A NA 405 I NA NA 1_555 D DC 3 D OP1 DC 3 1_555 98.0 A VAL 65 A O VAL 65 1_555 A NA 405 I NA NA 1_555 D DC 3 D OP1 DC 3 1_555 91.0 A HOH 644 N O HOH 1_555 A NA 405 I NA NA 1_555 D DC 3 D OP1 DC 3 1_555 91.0 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 91.6 A LEU 62 A O LEU 62 1_555 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 166.8 A VAL 65 A O VAL 65 1_555 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 93.7 A HOH 644 N O HOH 1_555 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 93.9 D DC 3 D OP1 DC 3 1_555 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 79.4 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 A VAL 103 A O VAL 103 1_555 97.3 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 A ILE 106 A O ILE 106 1_555 92.6 A VAL 103 A O VAL 103 1_555 A NA 404 H NA NA 1_555 A ILE 106 A O ILE 106 1_555 88.6 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 A HOH 545 N O HOH 1_555 80.9 A VAL 103 A O VAL 103 1_555 A NA 404 H NA NA 1_555 A HOH 545 N O HOH 1_555 91.4 A ILE 106 A O ILE 106 1_555 A NA 404 H NA NA 1_555 A HOH 545 N O HOH 1_555 173.4 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 P DG 9 C OP1 DG 9 1_555 163.6 A VAL 103 A O VAL 103 1_555 A NA 404 H NA NA 1_555 P DG 9 C OP1 DG 9 1_555 97.5 A ILE 106 A O ILE 106 1_555 A NA 404 H NA NA 1_555 P DG 9 C OP1 DG 9 1_555 94.6 A HOH 545 N O HOH 1_555 A NA 404 H NA NA 1_555 P DG 9 C OP1 DG 9 1_555 91.9 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 77.8 A VAL 103 A O VAL 103 1_555 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 174.8 A ILE 106 A O ILE 106 1_555 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 89.9 A HOH 545 N O HOH 1_555 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 89.5 P DG 9 C OP1 DG 9 1_555 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 87.5 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A ASP 192 A OD2 ASP 192 1_555 96.2 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O2B DUP 1_555 170.0 A ASP 192 A OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O2B DUP 1_555 92.5 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O3G DUP 1_555 81.9 A ASP 192 A OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O3G DUP 1_555 177.2 A DUP 401 E O2B DUP 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O3G DUP 1_555 89.5 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O1A DUP 1_555 94.5 A ASP 192 A OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O1A DUP 1_555 87.1 A DUP 401 E O2B DUP 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O1A DUP 1_555 90.9 A DUP 401 E O3G DUP 1_555 A MG 402 F MG MG 1_555 A DUP 401 E O1A DUP 1_555 91.0 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 82.0 A ASP 192 A OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 87.3 A DUP 401 E O2B DUP 1_555 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 93.5 A DUP 401 E O3G DUP 1_555 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 94.4 A DUP 401 E O1A DUP 1_555 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 173.0 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 A ASP 192 A OD1 ASP 192 1_555 98.7 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 A DUP 401 E O1A DUP 1_555 99.1 A ASP 192 A OD1 ASP 192 1_555 A MG 403 G MG MG 1_555 A DUP 401 E O1A DUP 1_555 90.0 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 A HOH 501 N O HOH 1_555 87.2 A ASP 192 A OD1 ASP 192 1_555 A MG 403 G MG MG 1_555 A HOH 501 N O HOH 1_555 95.0 A DUP 401 E O1A DUP 1_555 A MG 403 G MG MG 1_555 A HOH 501 N O HOH 1_555 171.3 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 P DC 10 C O3' DC 10 1_555 164.0 A ASP 192 A OD1 ASP 192 1_555 A MG 403 G MG MG 1_555 P DC 10 C O3' DC 10 1_555 88.5 A DUP 401 E O1A DUP 1_555 A MG 403 G MG MG 1_555 P DC 10 C O3' DC 10 1_555 95.1 A HOH 501 N O HOH 1_555 A MG 403 G MG MG 1_555 P DC 10 C O3' DC 10 1_555 78.0 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 86.8 A ASP 192 A OD1 ASP 192 1_555 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 170.5 A DUP 401 E O1A DUP 1_555 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 81.4 A HOH 501 N O HOH 1_555 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 93.0 P DC 10 C O3' DC 10 1_555 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 88.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 150 A N ILE 150 A O SER 188 A O SER 188 A N THR 176 A N THR 176 A O LEU 194 A O LEU 194 A N VAL 193 A N VAL 193 A O GLU 256 A O GLU 256 A O ARG 253 A O ARG 253 A N CYS 239 A N CYS 239 A O MET 236 A O MET 236 A N LEU 228 A N LEU 228 A N THR 201 A N THR 201 A O SER 204 A O SER 204 A N THR 292 A N THR 292 A O ARG 299 A O ARG 299 1 A MET 1 A MET 1 1 Y 1 A SER 2 A SER 2 1 Y 1 A LYS 3 A LYS 3 1 Y 1 A ARG 4 A ARG 4 1 Y 1 A LYS 5 A LYS 5 1 Y 1 A ALA 6 A ALA 6 1 Y 1 A PRO 7 A PRO 7 1 Y 1 A GLN 8 A GLN 8 1 Y 1 A GLU 9 A GLU 9 1 Y 1 D D P OP3 DG DG 1 1 -0.086 0.012 1.607 1.521 N 1 A LYS 120 -140.69 13.25 1 A CYS 178 -106.54 -137.76 1 A LYS 209 55.29 17.59 dumpSoak.param protein.top dna-rna.top water.top dNTP.top 26.9 2.46 0.00 0.88 0.17 0.00 -2.62 0.233 0.005 0.192 0.192 2.00 22.57 2609 28347 26058 10.0 91.1 RANDOM 322466.77 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB entry 2FMS Engh & Huber FLAT MODEL 50.6033 0.341635 0.28 0.22 5.00 0.23 0.18 2.00 22.57 449 3731 36 631 2615 0.005 1.0 24.1 0.93 1.34 1.50 2.01 2.00 2.01 2.00 2.96 2.50 0.275 0.013 0.227 2.13 428 3780 2747 6 10.2 88.7 11.1 2.0 50 4JWM 28347 28347 0 2 1 3.3 99.1 0.446 2.0 2.07 2.8 2747 1 3.1 96.8 data collection HKL-2000 refinement CNS data reduction HKL-2000 data scaling HKL-2000 phasing CNS Ternary complex of D256E mutant of DNA Polymerase Beta 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 7 N N 7 N N 8 N N 8 N N 8 N N 8 N N 9 N N 9 N N 9 N N 9 N N A ASN 12 A ASN 12 HELX_P A VAL 29 A VAL 29 1 1 18 A ALA 32 A ALA 32 HELX_P A TYR 49 A TYR 49 1 2 18 A SER 55 A SER 55 HELX_P A LYS 61 A LYS 61 1 3 7 A GLY 66 A GLY 66 HELX_P A GLY 80 A GLY 80 1 4 15 A LEU 82 A LEU 82 HELX_P A ASP 91 A ASP 91 1 5 10 A ASP 91 A ASP 91 HELX_P A THR 101 A THR 101 1 6 11 A GLY 107 A GLY 107 HELX_P A GLU 117 A GLU 117 1 7 11 A THR 121 A THR 121 HELX_P A ASN 128 A ASN 128 1 8 8 A GLU 129 A GLU 129 HELX_P A LEU 132 A LEU 132 5 9 4 A ASN 133 A ASN 133 HELX_P A TYR 142 A TYR 142 1 10 10 A TYR 142 A TYR 142 HELX_P A LYS 148 A LYS 148 1 11 7 A ARG 152 A ARG 152 HELX_P A ASP 170 A ASP 170 1 12 19 A CYS 178 A CYS 178 HELX_P A ARG 183 A ARG 183 1 13 6 A LYS 209 A LYS 209 HELX_P A VAL 221 A VAL 221 1 14 13 A PRO 261 A PRO 261 HELX_P A ASP 263 A ASP 263 5 15 3 A GLN 264 A GLN 264 HELX_P A GLY 274 A GLY 274 1 16 11 A SER 275 A SER 275 HELX_P A GLY 290 A GLY 290 1 17 16 A SER 315 A SER 315 HELX_P A ILE 323 A ILE 323 1 18 9 A GLU 329 A GLU 329 HELX_P A ARG 333 A ARG 333 5 19 5 metalc 2.464 A LYS 60 A O LYS 60 1_555 A NA 405 I NA NA 1_555 metalc 2.308 A LEU 62 A O LEU 62 1_555 A NA 405 I NA NA 1_555 metalc 2.338 A VAL 65 A O VAL 65 1_555 A NA 405 I NA NA 1_555 metalc 2.314 A THR 101 A O THR 101 1_555 A NA 404 H NA NA 1_555 metalc 2.534 A VAL 103 A O VAL 103 1_555 A NA 404 H NA NA 1_555 metalc 2.540 A ILE 106 A O ILE 106 1_555 A NA 404 H NA NA 1_555 metalc 2.091 A ASP 190 A OD1 ASP 190 1_555 A MG 402 F MG MG 1_555 metalc 2.159 A ASP 190 A OD2 ASP 190 1_555 A MG 403 G MG MG 1_555 metalc 2.011 A ASP 192 A OD2 ASP 192 1_555 A MG 402 F MG MG 1_555 metalc 2.078 A ASP 192 A OD1 ASP 192 1_555 A MG 403 G MG MG 1_555 metalc 1.939 A DUP 401 E O2B DUP 1_555 A MG 402 F MG MG 1_555 metalc 2.121 A DUP 401 E O3G DUP 1_555 A MG 402 F MG MG 1_555 metalc 2.264 A DUP 401 E O1A DUP 1_555 A MG 402 F MG MG 1_555 metalc 2.148 A DUP 401 E O1A DUP 1_555 A MG 403 G MG MG 1_555 metalc 2.193 A MG 402 F MG MG 1_555 A HOH 502 N O HOH 1_555 metalc 2.082 A MG 403 G MG MG 1_555 A HOH 501 N O HOH 1_555 metalc 2.126 A MG 403 G MG MG 1_555 P DC 10 C O3' DC 10 1_555 metalc 2.158 A MG 403 G MG MG 1_555 P HOH 101 P O HOH 1_555 metalc 2.434 A NA 404 H NA NA 1_555 A HOH 545 N O HOH 1_555 metalc 2.361 A NA 404 H NA NA 1_555 P DG 9 C OP1 DG 9 1_555 metalc 2.597 A NA 404 H NA NA 1_555 P HOH 104 P O HOH 1_555 metalc 2.728 A NA 405 I NA NA 1_555 A HOH 644 N O HOH 1_555 metalc 2.552 A NA 405 I NA NA 1_555 D DC 3 D OP1 DC 3 1_555 metalc 2.561 A NA 405 I NA NA 1_555 D HOH 104 Q O HOH 1_555 hydrog WATSON-CRICK T DC 1 B N3 DC 1 1_555 D DG 5 D N1 DG 5 1_555 hydrog WATSON-CRICK T DC 1 B N4 DC 1 1_555 D DG 5 D O6 DG 5 1_555 hydrog WATSON-CRICK T DC 1 B O2 DC 1 1_555 D DG 5 D N2 DG 5 1_555 hydrog WATSON-CRICK T DC 2 B N3 DC 2 1_555 D DG 4 D N1 DG 4 1_555 hydrog WATSON-CRICK T DC 2 B N4 DC 2 1_555 D DG 4 D O6 DG 4 1_555 hydrog WATSON-CRICK T DC 2 B O2 DC 2 1_555 D DG 4 D N2 DG 4 1_555 hydrog WATSON-CRICK T DG 3 B N1 DG 3 1_555 D DC 3 D N3 DC 3 1_555 hydrog WATSON-CRICK T DG 3 B N2 DG 3 1_555 D DC 3 D O2 DC 3 1_555 hydrog WATSON-CRICK T DG 3 B O6 DG 3 1_555 D DC 3 D N4 DC 3 1_555 hydrog WATSON-CRICK T DA 4 B N1 DA 4 1_555 D DT 2 D N3 DT 2 1_555 hydrog WATSON-CRICK T DA 4 B N6 DA 4 1_555 D DT 2 D O4 DT 2 1_555 hydrog WATSON-CRICK T DC 5 B N3 DC 5 1_555 D DG 1 D N1 DG 1 1_555 hydrog WATSON-CRICK T DC 5 B N4 DC 5 1_555 D DG 1 D O6 DG 1 1_555 hydrog WATSON-CRICK T DC 5 B O2 DC 5 1_555 D DG 1 D N2 DG 1 1_555 hydrog WATSON-CRICK T DG 7 B N1 DG 7 1_555 P DC 10 C N3 DC 10 1_555 hydrog WATSON-CRICK T DG 7 B N2 DG 7 1_555 P DC 10 C O2 DC 10 1_555 hydrog WATSON-CRICK T DG 7 B O6 DG 7 1_555 P DC 10 C N4 DC 10 1_555 hydrog WATSON-CRICK T DC 8 B N3 DC 8 1_555 P DG 9 C N1 DG 9 1_555 hydrog WATSON-CRICK T DC 8 B N4 DC 8 1_555 P DG 9 C O6 DG 9 1_555 hydrog WATSON-CRICK T DC 8 B O2 DC 8 1_555 P DG 9 C N2 DG 9 1_555 hydrog WATSON-CRICK T DG 9 B N1 DG 9 1_555 P DC 8 C N3 DC 8 1_555 hydrog WATSON-CRICK T DG 9 B N2 DG 9 1_555 P DC 8 C O2 DC 8 1_555 hydrog WATSON-CRICK T DG 9 B O6 DG 9 1_555 P DC 8 C N4 DC 8 1_555 hydrog WATSON-CRICK T DC 10 B N3 DC 10 1_555 P DG 7 C N1 DG 7 1_555 hydrog WATSON-CRICK T DC 10 B N4 DC 10 1_555 P DG 7 C O6 DG 7 1_555 hydrog WATSON-CRICK T DC 10 B O2 DC 10 1_555 P DG 7 C N2 DG 7 1_555 hydrog WATSON-CRICK T DA 11 B N1 DA 11 1_555 P DT 6 C N3 DT 6 1_555 hydrog WATSON-CRICK T DA 11 B N6 DA 11 1_555 P DT 6 C O4 DT 6 1_555 hydrog WATSON-CRICK T DT 12 B N3 DT 12 1_555 P DA 5 C N1 DA 5 1_555 hydrog WATSON-CRICK T DT 12 B O4 DT 12 1_555 P DA 5 C N6 DA 5 1_555 hydrog WATSON-CRICK T DC 13 B N3 DC 13 1_555 P DG 4 C N1 DG 4 1_555 hydrog WATSON-CRICK T DC 13 B N4 DC 13 1_555 P DG 4 C O6 DG 4 1_555 hydrog WATSON-CRICK T DC 13 B O2 DC 13 1_555 P DG 4 C N2 DG 4 1_555 hydrog WATSON-CRICK T DA 14 B N1 DA 14 1_555 P DT 3 C N3 DT 3 1_555 hydrog WATSON-CRICK T DA 14 B N6 DA 14 1_555 P DT 3 C O4 DT 3 1_555 hydrog WATSON-CRICK T DG 15 B N1 DG 15 1_555 P DC 2 C N3 DC 2 1_555 hydrog WATSON-CRICK T DG 15 B N2 DG 15 1_555 P DC 2 C O2 DC 2 1_555 hydrog WATSON-CRICK T DG 15 B O6 DG 15 1_555 P DC 2 C N4 DC 2 1_555 hydrog WATSON-CRICK T DC 16 B N3 DC 16 1_555 P DG 1 C N1 DG 1 1_555 hydrog WATSON-CRICK T DC 16 B N4 DC 16 1_555 P DG 1 C O6 DG 1 1_555 hydrog WATSON-CRICK T DC 16 B O2 DC 16 1_555 P DG 1 C N2 DG 1 1_555 TRANSFERASE/DNA Nucleotidyl Transfer, dNTP, Non-hydrolyzable analog, TRANSFERASE-DNA complex A GLY 274 A GLY 274 1 A SER 275 A SER 275 0.64 DPOLB_HUMAN UNP 1 1 P06746 MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE 4JWM PDB 2 4JWM 4JWM PDB 3 4JWM 4JWM PDB 4 4JWM 1 335 4JWM 1 335 P06746 A 1 1 335 1 16 4JWM 1 16 4JWM T 2 1 16 1 10 4JWM 1 10 4JWM P 3 1 10 1 5 4JWM 1 5 4JWM D 4 1 5 1 ASP engineered mutation GLU 256 4JWM A P06746 UNP 256 256 2 5 2 2 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 150 A ILE 150 A PRO 151 A PRO 151 A SER 187 A SER 187 A SER 188 A SER 188 A ILE 174 A ILE 174 A VAL 177 A VAL 177 A MET 191 A MET 191 A THR 196 A THR 196 A ARG 253 A ARG 253 A LEU 259 A LEU 259 A LYS 234 A LYS 234 A CYS 239 A CYS 239 A ILE 224 A ILE 224 A LYS 230 A LYS 230 A PHE 200 A PHE 200 A THR 201 A THR 201 A SER 204 A SER 204 A THR 205 A THR 205 A PHE 291 A PHE 291 A ILE 293 A ILE 293 A ILE 298 A ILE 298 A PRO 300 A PRO 300 BINDING SITE FOR RESIDUE DUP A 401 A DUP 401 Software 28 BINDING SITE FOR RESIDUE MG A 402 A MG 402 Software 5 BINDING SITE FOR RESIDUE MG A 403 A MG 403 Software 8 BINDING SITE FOR RESIDUE NA A 404 A NA 404 Software 6 BINDING SITE FOR RESIDUE NA A 405 A NA 405 Software 6 BINDING SITE FOR RESIDUE CL A 406 A CL 406 Software 3 BINDING SITE FOR RESIDUE CL A 407 A CL 407 Software 2 BINDING SITE FOR RESIDUE CL A 408 A CL 408 Software 3 BINDING SITE FOR RESIDUE CL A 409 A CL 409 Software 2 A GLY 179 A GLY 179 28 1_555 A SER 180 A SER 180 28 1_555 A ARG 183 A ARG 183 28 1_555 A SER 188 A SER 188 28 1_555 A GLY 189 A GLY 189 28 1_555 A ASP 190 A ASP 190 28 1_555 A ASP 192 A ASP 192 28 1_555 A TYR 271 A TYR 271 28 1_555 A PHE 272 A PHE 272 28 1_555 A THR 273 A THR 273 28 1_555 A GLY 274 A GLY 274 28 1_555 A ASP 276 A ASP 276 28 1_555 A ASN 279 A ASN 279 28 1_555 A MG 402 F MG 28 1_555 A MG 403 G MG 28 1_555 A HOH 502 N HOH 28 1_555 A HOH 510 N HOH 28 1_555 A HOH 526 N HOH 28 1_555 A HOH 530 N HOH 28 1_555 A HOH 609 N HOH 28 1_555 A HOH 611 N HOH 28 1_555 A HOH 630 N HOH 28 1_555 A HOH 706 N HOH 28 1_555 A HOH 748 N HOH 28 1_555 P DC 10 C DC 10 28 1_555 P HOH 101 P HOH 28 1_555 P HOH 102 P HOH 28 1_555 T DA 6 B DA 6 28 1_555 A ASP 190 A ASP 190 5 1_555 A ASP 192 A ASP 192 5 1_555 A DUP 401 E DUP 5 1_555 A MG 403 G MG 5 1_555 A HOH 502 N HOH 5 1_555 A ASP 190 A ASP 190 8 1_555 A ASP 192 A ASP 192 8 1_555 A GLU 256 A GLU 256 8 1_555 A DUP 401 E DUP 8 1_555 A MG 402 F MG 8 1_555 A HOH 501 N HOH 8 1_555 P DC 10 C DC 10 8 1_555 P HOH 101 P HOH 8 1_555 A THR 101 A THR 101 6 1_555 A VAL 103 A VAL 103 6 1_555 A ILE 106 A ILE 106 6 1_555 A HOH 545 N HOH 6 1_555 P DG 9 C DG 9 6 1_555 P HOH 104 P HOH 6 1_555 A LYS 60 A LYS 60 6 1_555 A LEU 62 A LEU 62 6 1_555 A VAL 65 A VAL 65 6 1_555 A HOH 644 N HOH 6 1_555 D DC 3 D DC 3 6 1_555 D HOH 104 Q HOH 6 1_555 A ASN 294 A ASN 294 3 1_555 A THR 297 A THR 297 3 1_555 A ARG 299 A ARG 299 3 1_555 A ALA 32 A ALA 32 2 1_555 A HIS 34 A HIS 34 2 1_555 A GLU 329 A GLU 329 3 1_555 A PRO 330 A PRO 330 3 1_555 A LYS 331 A LYS 331 3 1_555 A LEU 82 A LEU 82 2 1_555 A ARG 89 A ARG 89 2 1_555 4 P 1 21 1