0.015392
0.000000
0.000000
0.000000
0.015216
0.000000
0.000000
0.000000
0.006281
0.00000
0.00000
0.00000
Julien, J.-P.
Diwanji, D.C.
Burton, D.R.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
64.970
65.720
159.210
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-mannopyranose
beta-D-mannose; D-mannose; mannose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O5
164.156
alpha-L-fucopyranose
alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose
L-saccharide, alpha linking
C6 H12 O6
180.156
beta-D-galactopyranose
beta-D-galactose; D-galactose; galactose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
alpha-D-mannose; D-mannose; mannose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H19 N O9
309.270
N-acetyl-alpha-neuraminic acid
N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID
D-saccharide, alpha linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
S
C
N
78
R
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
R
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
S
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
R
C
N
113
S
C
N
114
R
C
N
115
S
C
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
R
C
N
136
R
C
N
137
S
C
N
138
R
C
N
139
R
C
N
140
N
C
N
141
N
O
N
142
N
O
N
143
N
O
N
144
N
O
N
145
N
O
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
S
C
N
161
N
C
N
162
N
O
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
N
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
O
N
187
N
O
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
O
N
212
N
C
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
N
C
Y
227
N
C
Y
228
N
N
Y
229
N
C
Y
230
N
C
Y
231
N
N
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
S
C
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
N
N
269
S
C
N
270
N
C
N
271
N
O
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
N
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
S
C
N
316
S
C
N
317
S
C
N
318
S
C
N
319
R
C
N
320
N
C
N
321
N
O
N
322
N
O
N
323
N
O
N
324
N
O
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
N
344
N
C
N
345
N
S
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
R
C
N
360
R
C
N
361
R
C
N
362
S
C
N
363
R
C
N
364
N
C
N
365
N
C
N
366
N
C
N
367
N
N
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
O
N
372
N
O
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
N
434
N
O
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
C
N
444
R
C
N
445
N
C
N
446
S
C
N
447
R
C
N
448
R
C
N
449
R
C
N
450
R
C
N
451
N
C
N
452
N
C
N
453
N
C
N
454
N
N
N
455
N
O
N
456
N
O
N
457
N
O
N
458
N
O
N
459
N
O
N
460
N
O
N
461
N
O
N
462
N
O
N
463
N
O
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
R
C
N
488
N
O
N
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
N
N
501
S
C
N
502
N
C
N
503
N
O
N
504
N
C
Y
505
N
C
Y
506
N
C
Y
507
N
C
Y
508
N
N
Y
509
N
C
Y
510
N
C
Y
511
N
C
Y
512
N
C
Y
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
N
N
528
S
C
N
529
N
C
N
530
N
O
N
531
N
C
Y
532
N
C
Y
533
N
C
Y
534
N
C
Y
535
N
C
Y
536
N
C
Y
537
N
C
N
538
N
O
N
539
N
O
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
N
N
552
S
C
N
553
N
C
N
554
N
O
N
555
N
C
N
556
N
C
N
557
N
C
N
558
N
O
N
559
N
H
N
560
N
H
N
561
N
H
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
Y
224
N
sing
Y
225
N
doub
Y
226
N
doub
N
227
N
sing
Y
228
N
sing
N
229
N
sing
Y
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
Y
386
N
doub
Y
387
N
sing
Y
388
N
sing
N
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
doub
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
doub
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
doub
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
doub
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
Y
495
N
doub
Y
496
N
sing
Y
497
N
sing
N
498
N
sing
Y
499
N
doub
Y
500
N
sing
Y
501
N
sing
N
502
N
sing
Y
503
N
sing
Y
504
N
doub
N
505
N
sing
Y
506
N
doub
N
507
N
sing
Y
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
doub
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
Y
523
N
doub
Y
524
N
sing
Y
525
N
sing
N
526
N
sing
Y
527
N
doub
N
528
N
sing
Y
529
N
doub
N
530
N
sing
Y
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
doub
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
US
Plos Pathog.
1553-7366
9
e1003342
e1003342
10.1371/journal.ppat.1003342
23658524
Broadly neutralizing antibody PGT121 allosterically modulates CD4 binding via recognition of the HIV-1 gp120 V3 base and multiple surrounding glycans.
2013
10.2210/pdb4jy4/pdb
pdb_00004jy4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
PIXEL
2011-01-18
PSI PILATUS 6M
Side scattering bent cube-root I-beam single crystal, asymmetric cut 4.965 degrees
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
BL11-1
SSRL
0.979
SYNCHROTRON
SSRL BEAMLINE BL11-1
25169.230
PGT121 heavy chain
Fab
1
man
polymer
22574.947
PGT121 light chain
Fab
1
man
polymer
1713.552
N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
92.094
GLYCEROL
3
syn
non-polymer
18.015
water
13
nat
water
no
no
QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL
SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL
SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
B
polypeptide(L)
no
no
SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD
YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET
TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD
YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET
TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
human
sample
9606
Homo sapiens
HEK 293F
9606
Homo sapiens
human
human
sample
9606
Homo sapiens
HEK 293F
9606
Homo sapiens
1
3.56
65.45
VAPOR DIFFUSION, SITTING DROP
7.5
0.1 M HEPES, pH 7.5, 30% v/v PEG400, 5% w/v PEG3000, 10% v/v glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_close_contact
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2013-05-15
1
1
2014-02-05
2
0
2020-07-29
2
1
2023-09-20
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.auth_seq_id_2
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
B
NAG
302
n
C
NAG
1
B
NAG
303
n
C
NAG
2
B
BMA
304
n
C
BMA
3
B
MAN
305
n
C
MAN
4
B
NAG
306
n
C
NAG
5
B
GAL
307
n
C
GAL
6
B
SIA
308
n
C
SIA
7
B
MAN
309
n
C
MAN
8
B
FUC
310
n
C
FUC
9
DManpb
b-D-mannopyranose
b-D-Manp
Man
LFucpa
a-L-fucopyranose
a-L-Fucp
Fuc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DManpa
a-D-mannopyranose
a-D-Manp
Man
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
DNeup5Aca
N-acetyl-a-D-neuraminic acid
a-D-Neup5Ac
Neu5Ac
RCSB
Y
RCSB
2013-03-29
REL
REL
oligosaccharide
DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/6,9,8/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-5-3-6/a4-b1_a6-i1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f6-g2
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(6+2)][a-D-Neup5Ac]{}}}}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}
3
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
C1
O4
BMA
NAG
3
2
3
O1
HO4
sing
C1
O3
MAN
BMA
4
3
3
O1
HO3
sing
C1
O2
NAG
MAN
5
4
3
O1
HO2
sing
C1
O4
GAL
NAG
6
5
3
O1
HO4
sing
C2
O6
SIA
GAL
7
6
3
O2
HO6
sing
C1
O6
MAN
BMA
8
3
3
O1
HO6
sing
C1
O6
FUC
NAG
9
1
3
O1
HO6
sing
n
n
n
n
n
n
n
n
n
GOL
GLYCEROL
HOH
water
4JY6
PDB ENTRY 4JY6
PDB
experimental model
GOL
301
4
GOL
GOL
301
B
GOL
301
4
GOL
GOL
301
A
GOL
302
4
GOL
GOL
302
A
HOH
401
5
HOH
HOH
401
B
HOH
404
5
HOH
HOH
402
B
HOH
405
5
HOH
HOH
403
B
HOH
406
5
HOH
HOH
404
B
HOH
407
5
HOH
HOH
405
B
HOH
408
5
HOH
HOH
406
B
HOH
401
5
HOH
HOH
401
A
HOH
402
5
HOH
HOH
402
A
HOH
403
5
HOH
HOH
403
A
HOH
404
5
HOH
HOH
404
A
HOH
405
5
HOH
HOH
405
A
HOH
402
5
HOH
HOH
406
A
HOH
403
5
HOH
HOH
407
A
GLN
1
n
1
GLN
1
B
MET
2
n
2
MET
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
GLN
5
n
5
GLN
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
PRO
9
n
9
PRO
9
B
GLY
10
n
10
GLY
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
LYS
13
n
13
LYS
13
B
PRO
14
n
14
PRO
14
B
SER
15
n
15
SER
15
B
GLU
16
n
16
GLU
16
B
THR
17
n
17
THR
17
B
LEU
18
n
18
LEU
18
B
SER
19
n
19
SER
19
B
LEU
20
n
20
LEU
20
B
THR
21
n
21
THR
21
B
CYS
22
n
22
CYS
22
B
SER
23
n
23
SER
23
B
VAL
24
n
24
VAL
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
ALA
27
n
27
ALA
27
B
SER
28
n
28
SER
28
B
ILE
29
n
29
ILE
29
B
SER
30
n
30
SER
30
B
ASP
31
n
31
ASP
31
B
SER
32
n
32
SER
32
B
TYR
33
n
33
TYR
33
B
TRP
34
n
34
TRP
34
B
SER
35
n
35
SER
35
B
TRP
36
n
36
TRP
36
B
ILE
37
n
37
ILE
37
B
ARG
38
n
38
ARG
38
B
ARG
39
n
39
ARG
39
B
SER
40
n
40
SER
40
B
PRO
41
n
41
PRO
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
LEU
45
n
45
LEU
45
B
GLU
46
n
46
GLU
46
B
TRP
47
n
47
TRP
47
B
ILE
48
n
48
ILE
48
B
GLY
49
n
49
GLY
49
B
TYR
50
n
50
TYR
50
B
VAL
51
n
51
VAL
51
B
HIS
52
n
52
HIS
52
B
LYS
53
n
53
LYS
53
B
SER
54
n
54
SER
54
B
GLY
55
n
55
GLY
55
B
ASP
56
n
56
ASP
56
B
THR
57
n
57
THR
57
B
ASN
58
n
58
ASN
58
B
TYR
59
n
59
TYR
59
B
SER
60
n
60
SER
60
B
PRO
61
n
61
PRO
61
B
SER
62
n
62
SER
62
B
LEU
63
n
63
LEU
63
B
LYS
64
n
64
LYS
64
B
SER
65
n
65
SER
65
B
ARG
66
n
66
ARG
66
B
VAL
67
n
67
VAL
67
B
ASN
68
n
68
ASN
68
B
LEU
69
n
69
LEU
69
B
SER
70
n
70
SER
70
B
LEU
71
n
71
LEU
71
B
ASP
72
n
72
ASP
72
B
THR
73
n
73
THR
73
B
SER
74
n
74
SER
74
B
LYS
75
n
75
LYS
75
B
ASN
76
n
76
ASN
76
B
GLN
77
n
77
GLN
77
B
VAL
78
n
78
VAL
78
B
SER
79
n
79
SER
79
B
LEU
80
n
80
LEU
80
B
SER
81
n
81
SER
81
B
LEU
82
n
82
LEU
82
B
VAL
82
n
83
A
VAL
82
B
ALA
82
n
84
B
ALA
82
B
ALA
82
n
85
C
ALA
82
B
THR
83
n
86
THR
83
B
ALA
84
n
87
ALA
84
B
ALA
85
n
88
ALA
85
B
ASP
86
n
89
ASP
86
B
SER
87
n
90
SER
87
B
GLY
88
n
91
GLY
88
B
LYS
89
n
92
LYS
89
B
TYR
90
n
93
TYR
90
B
TYR
91
n
94
TYR
91
B
CYS
92
n
95
CYS
92
B
ALA
93
n
96
ALA
93
B
ARG
94
n
97
ARG
94
B
THR
95
n
98
THR
95
B
LEU
96
n
99
LEU
96
B
HIS
97
n
100
HIS
97
B
GLY
98
n
101
GLY
98
B
ARG
99
n
102
ARG
99
B
ARG
100
n
103
ARG
100
B
ILE
100
n
104
A
ILE
100
B
TYR
100
n
105
B
TYR
100
B
GLY
100
n
106
C
GLY
100
B
ILE
100
n
107
D
ILE
100
B
VAL
100
n
108
E
VAL
100
B
ALA
100
n
109
F
ALA
100
B
PHE
100
n
110
G
PHE
100
B
ASN
100
n
111
H
ASN
100
B
GLU
100
n
112
I
GLU
100
B
TRP
100
n
113
J
TRP
100
B
PHE
100
n
114
K
PHE
100
B
THR
100
n
115
L
THR
100
B
TYR
100
n
116
M
TYR
100
B
PHE
100
n
117
N
PHE
100
B
TYR
100
n
118
O
TYR
100
B
MET
100
n
119
P
MET
100
B
ASP
100
n
120
Q
ASP
100
B
VAL
100
n
121
R
VAL
100
B
TRP
101
n
122
TRP
101
B
GLY
102
n
123
GLY
102
B
ASN
103
n
124
ASN
103
B
GLY
104
n
125
GLY
104
B
THR
105
n
126
THR
105
B
GLN
106
n
127
GLN
106
B
VAL
107
n
128
VAL
107
B
THR
108
n
129
THR
108
B
VAL
109
n
130
VAL
109
B
SER
110
n
131
SER
110
B
SER
111
n
132
SER
111
B
ALA
112
n
133
ALA
112
B
SER
113
n
134
SER
113
B
THR
114
n
135
THR
114
B
LYS
115
n
136
LYS
115
B
GLY
116
n
137
GLY
116
B
PRO
117
n
138
PRO
117
B
SER
118
n
139
SER
118
B
VAL
119
n
140
VAL
119
B
PHE
120
n
141
PHE
120
B
PRO
121
n
142
PRO
121
B
LEU
122
n
143
LEU
122
B
ALA
123
n
144
ALA
123
B
PRO
124
n
145
PRO
124
B
SER
125
n
146
SER
125
B
SER
126
n
147
SER
126
B
LYS
127
n
148
LYS
127
B
SER
128
n
149
SER
128
B
THR
129
n
150
THR
129
B
SER
130
n
151
SER
130
B
GLY
131
n
152
GLY
131
B
GLY
132
n
153
GLY
132
B
THR
133
n
154
THR
133
B
ALA
134
n
155
ALA
134
B
ALA
135
n
156
ALA
135
B
LEU
136
n
157
LEU
136
B
GLY
137
n
158
GLY
137
B
CYS
138
n
159
CYS
138
B
LEU
139
n
160
LEU
139
B
VAL
140
n
161
VAL
140
B
LYS
141
n
162
LYS
141
B
ASP
142
n
163
ASP
142
B
TYR
143
n
164
TYR
143
B
PHE
144
n
165
PHE
144
B
PRO
145
n
166
PRO
145
B
GLU
146
n
167
GLU
146
B
PRO
147
n
168
PRO
147
B
VAL
148
n
169
VAL
148
B
THR
149
n
170
THR
149
B
VAL
150
n
171
VAL
150
B
SER
151
n
172
SER
151
B
TRP
152
n
173
TRP
152
B
ASN
153
n
174
ASN
153
B
SER
154
n
175
SER
154
B
GLY
155
n
176
GLY
155
B
ALA
156
n
177
ALA
156
B
LEU
157
n
178
LEU
157
B
THR
158
n
179
THR
158
B
SER
159
n
180
SER
159
B
GLY
160
n
181
GLY
160
B
VAL
161
n
182
VAL
161
B
HIS
162
n
183
HIS
162
B
THR
163
n
184
THR
163
B
PHE
164
n
185
PHE
164
B
PRO
165
n
186
PRO
165
B
ALA
166
n
187
ALA
166
B
VAL
167
n
188
VAL
167
B
LEU
168
n
189
LEU
168
B
GLN
169
n
190
GLN
169
B
SER
170
n
191
SER
170
B
SER
171
n
192
SER
171
B
GLY
172
n
193
GLY
172
B
LEU
173
n
194
LEU
173
B
TYR
174
n
195
TYR
174
B
SER
175
n
196
SER
175
B
LEU
176
n
197
LEU
176
B
SER
177
n
198
SER
177
B
SER
178
n
199
SER
178
B
VAL
179
n
200
VAL
179
B
VAL
180
n
201
VAL
180
B
THR
181
n
202
THR
181
B
VAL
182
n
203
VAL
182
B
PRO
183
n
204
PRO
183
B
SER
184
n
205
SER
184
B
SER
185
n
206
SER
185
B
SER
186
n
207
SER
186
B
LEU
187
n
208
LEU
187
B
GLY
188
n
209
GLY
188
B
THR
189
n
210
THR
189
B
GLN
190
n
211
GLN
190
B
THR
191
n
212
THR
191
B
TYR
192
n
213
TYR
192
B
ILE
193
n
214
ILE
193
B
CYS
194
n
215
CYS
194
B
ASN
195
n
216
ASN
195
B
VAL
196
n
217
VAL
196
B
ASN
197
n
218
ASN
197
B
HIS
198
n
219
HIS
198
B
LYS
199
n
220
LYS
199
B
PRO
200
n
221
PRO
200
B
SER
201
n
222
SER
201
B
ASN
202
n
223
ASN
202
B
THR
203
n
224
THR
203
B
LYS
204
n
225
LYS
204
B
VAL
205
n
226
VAL
205
B
ASP
206
n
227
ASP
206
B
LYS
207
n
228
LYS
207
B
ARG
208
n
229
ARG
208
B
VAL
209
n
230
VAL
209
B
GLU
210
n
231
GLU
210
B
PRO
211
n
232
PRO
211
B
n
233
212
B
n
234
213
B
n
235
214
B
n
1
8
A
ASP
9
n
2
ASP
9
A
ILE
11
n
3
ILE
11
A
SER
12
n
4
SER
12
A
VAL
13
n
5
VAL
13
A
ALA
14
n
6
ALA
14
A
PRO
15
n
7
PRO
15
A
GLY
16
n
8
GLY
16
A
GLU
17
n
9
GLU
17
A
THR
18
n
10
THR
18
A
ALA
19
n
11
ALA
19
A
ARG
20
n
12
ARG
20
A
ILE
21
n
13
ILE
21
A
SER
22
n
14
SER
22
A
CYS
23
n
15
CYS
23
A
GLY
24
n
16
GLY
24
A
GLU
25
n
17
GLU
25
A
LYS
26
n
18
LYS
26
A
SER
27
n
19
SER
27
A
LEU
28
n
20
LEU
28
A
GLY
29
n
21
GLY
29
A
SER
30
n
22
SER
30
A
ARG
31
n
23
ARG
31
A
ALA
32
n
24
ALA
32
A
VAL
33
n
25
VAL
33
A
GLN
34
n
26
GLN
34
A
TRP
35
n
27
TRP
35
A
TYR
36
n
28
TYR
36
A
GLN
37
n
29
GLN
37
A
HIS
38
n
30
HIS
38
A
ARG
39
n
31
ARG
39
A
ALA
40
n
32
ALA
40
A
GLY
41
n
33
GLY
41
A
GLN
42
n
34
GLN
42
A
ALA
43
n
35
ALA
43
A
PRO
44
n
36
PRO
44
A
SER
45
n
37
SER
45
A
LEU
46
n
38
LEU
46
A
ILE
47
n
39
ILE
47
A
ILE
48
n
40
ILE
48
A
TYR
49
n
41
TYR
49
A
ASN
50
n
42
ASN
50
A
ASN
51
n
43
ASN
51
A
GLN
52
n
44
GLN
52
A
ASP
53
n
45
ASP
53
A
ARG
54
n
46
ARG
54
A
PRO
55
n
47
PRO
55
A
SER
56
n
48
SER
56
A
GLY
57
n
49
GLY
57
A
ILE
58
n
50
ILE
58
A
PRO
59
n
51
PRO
59
A
GLU
60
n
52
GLU
60
A
ARG
61
n
53
ARG
61
A
PHE
62
n
54
PHE
62
A
SER
63
n
55
SER
63
A
GLY
64
n
56
GLY
64
A
SER
65
n
57
SER
65
A
PRO
66
n
58
PRO
66
A
ASP
67
n
59
ASP
67
A
SER
67
n
60
A
SER
67
A
PRO
67
n
61
B
PRO
67
A
PHE
67
n
62
C
PHE
67
A
GLY
68
n
63
GLY
68
A
THR
69
n
64
THR
69
A
THR
70
n
65
THR
70
A
ALA
71
n
66
ALA
71
A
THR
72
n
67
THR
72
A
LEU
73
n
68
LEU
73
A
THR
74
n
69
THR
74
A
ILE
75
n
70
ILE
75
A
THR
76
n
71
THR
76
A
SER
77
n
72
SER
77
A
VAL
78
n
73
VAL
78
A
GLU
79
n
74
GLU
79
A
ALA
80
n
75
ALA
80
A
GLY
81
n
76
GLY
81
A
ASP
82
n
77
ASP
82
A
GLU
83
n
78
GLU
83
A
ALA
84
n
79
ALA
84
A
ASP
85
n
80
ASP
85
A
TYR
86
n
81
TYR
86
A
TYR
87
n
82
TYR
87
A
CYS
88
n
83
CYS
88
A
HIS
89
n
84
HIS
89
A
ILE
90
n
85
ILE
90
A
TRP
91
n
86
TRP
91
A
ASP
92
n
87
ASP
92
A
SER
93
n
88
SER
93
A
ARG
94
n
89
ARG
94
A
VAL
95
n
90
VAL
95
A
PRO
95
n
91
A
PRO
95
A
THR
95
n
92
B
THR
95
A
LYS
95
n
93
C
LYS
95
A
TRP
96
n
94
TRP
96
A
VAL
97
n
95
VAL
97
A
PHE
98
n
96
PHE
98
A
GLY
99
n
97
GLY
99
A
GLY
100
n
98
GLY
100
A
GLY
101
n
99
GLY
101
A
THR
102
n
100
THR
102
A
THR
103
n
101
THR
103
A
LEU
104
n
102
LEU
104
A
THR
105
n
103
THR
105
A
VAL
106
n
104
VAL
106
A
LEU
107
n
105
LEU
107
A
GLY
108
n
106
GLY
108
A
GLN
109
n
107
GLN
109
A
PRO
110
n
108
PRO
110
A
LYS
111
n
109
LYS
111
A
ALA
112
n
110
ALA
112
A
ALA
113
n
111
ALA
113
A
PRO
114
n
112
PRO
114
A
SER
115
n
113
SER
115
A
VAL
116
n
114
VAL
116
A
THR
117
n
115
THR
117
A
LEU
118
n
116
LEU
118
A
PHE
119
n
117
PHE
119
A
PRO
120
n
118
PRO
120
A
PRO
121
n
119
PRO
121
A
SER
122
n
120
SER
122
A
SER
123
n
121
SER
123
A
GLU
124
n
122
GLU
124
A
GLU
125
n
123
GLU
125
A
LEU
126
n
124
LEU
126
A
GLN
127
n
125
GLN
127
A
ALA
128
n
126
ALA
128
A
ASN
129
n
127
ASN
129
A
LYS
130
n
128
LYS
130
A
ALA
131
n
129
ALA
131
A
THR
132
n
130
THR
132
A
LEU
133
n
131
LEU
133
A
VAL
134
n
132
VAL
134
A
CYS
135
n
133
CYS
135
A
LEU
136
n
134
LEU
136
A
ILE
137
n
135
ILE
137
A
SER
138
n
136
SER
138
A
ASP
139
n
137
ASP
139
A
PHE
140
n
138
PHE
140
A
TYR
141
n
139
TYR
141
A
PRO
142
n
140
PRO
142
A
GLY
143
n
141
GLY
143
A
ALA
144
n
142
ALA
144
A
VAL
145
n
143
VAL
145
A
THR
146
n
144
THR
146
A
VAL
147
n
145
VAL
147
A
ALA
148
n
146
ALA
148
A
TRP
149
n
147
TRP
149
A
LYS
150
n
148
LYS
150
A
ALA
151
n
149
ALA
151
A
ASP
152
n
150
ASP
152
A
SER
153
n
151
SER
153
A
SER
154
n
152
SER
154
A
PRO
155
n
153
PRO
155
A
VAL
156
n
154
VAL
156
A
LYS
157
n
155
LYS
157
A
ALA
158
n
156
ALA
158
A
GLY
159
n
157
GLY
159
A
VAL
160
n
158
VAL
160
A
GLU
161
n
159
GLU
161
A
THR
162
n
160
THR
162
A
THR
163
n
161
THR
163
A
THR
164
n
162
THR
164
A
PRO
165
n
163
PRO
165
A
SER
166
n
164
SER
166
A
LYS
167
n
165
LYS
167
A
GLN
168
n
166
GLN
168
A
SER
169
n
167
SER
169
A
ASN
170
n
168
ASN
170
A
ASN
171
n
169
ASN
171
A
LYS
172
n
170
LYS
172
A
TYR
173
n
171
TYR
173
A
ALA
174
n
172
ALA
174
A
ALA
175
n
173
ALA
175
A
SER
176
n
174
SER
176
A
SER
177
n
175
SER
177
A
TYR
178
n
176
TYR
178
A
LEU
179
n
177
LEU
179
A
SER
180
n
178
SER
180
A
LEU
181
n
179
LEU
181
A
THR
182
n
180
THR
182
A
PRO
183
n
181
PRO
183
A
GLU
184
n
182
GLU
184
A
GLN
185
n
183
GLN
185
A
TRP
186
n
184
TRP
186
A
LYS
187
n
185
LYS
187
A
SER
188
n
186
SER
188
A
HIS
189
n
187
HIS
189
A
LYS
190
n
188
LYS
190
A
SER
191
n
189
SER
191
A
TYR
192
n
190
TYR
192
A
SER
193
n
191
SER
193
A
CYS
194
n
192
CYS
194
A
GLN
195
n
193
GLN
195
A
VAL
196
n
194
VAL
196
A
THR
197
n
195
THR
197
A
HIS
198
n
196
HIS
198
A
GLU
199
n
197
GLU
199
A
GLY
200
n
198
GLY
200
A
SER
201
n
199
SER
201
A
THR
202
n
200
THR
202
A
VAL
203
n
201
VAL
203
A
GLU
204
n
202
GLU
204
A
LYS
205
n
203
LYS
205
A
THR
206
n
204
THR
206
A
VAL
207
n
205
VAL
207
A
ALA
208
n
206
ALA
208
A
PRO
209
n
207
PRO
209
A
THR
210
n
208
THR
210
A
GLU
211
n
209
GLU
211
A
n
210
212
A
n
211
213
A
-0.0718
-0.1952
0.2492
-0.0405
-0.1111
0.3322
0.0625
0.2470
0.1505
-0.3364
-0.0347
-0.0090
-0.1235
0.5454
0.0000
0.5174
0.0849
-0.0175
0.6081
0.0225
0.5925
refined
22.4673
27.0570
30.9696
X-RAY DIFFRACTION
1.1238
-0.3258
-1.2313
0.4456
-0.4499
1.1404
-0.0405
0.2010
0.0648
0.2834
0.0028
-0.0902
0.1903
0.2317
0.0000
0.4520
0.0682
-0.1287
0.3284
-0.0291
0.3387
refined
15.9122
24.9088
39.5005
X-RAY DIFFRACTION
-0.0196
0.0703
0.1465
0.2942
-0.2105
-0.0375
-0.0030
0.0345
0.0658
0.0511
0.2133
-0.1883
-0.1186
0.4437
0.0000
0.2262
-0.0051
-0.0239
0.3347
-0.0463
0.2518
refined
13.6153
25.7388
24.1858
X-RAY DIFFRACTION
0.3328
-0.5244
-0.1608
-0.1790
-0.0969
0.3426
-0.0397
-0.1547
-0.0589
-0.1499
0.1434
0.0195
-0.0849
-0.0342
0.0000
0.1795
-0.0028
-0.0069
0.2647
-0.0185
0.2861
refined
6.5299
22.5636
1.1652
X-RAY DIFFRACTION
1.1643
1.2517
0.1025
0.3705
0.5336
0.5874
-0.0913
-0.2313
0.2600
0.0842
-0.0927
0.0415
-0.1054
0.0493
0.0000
0.2766
0.0688
-0.0555
0.4158
-0.0585
0.3833
refined
6.9307
24.9027
3.9451
X-RAY DIFFRACTION
0.0780
0.0274
-0.0820
-0.0605
-0.2286
0.1292
-0.0209
0.2004
0.3137
0.2143
0.0252
0.0432
0.0334
0.0339
-0.0000
0.2735
-0.0305
0.0062
0.4128
-0.0058
0.3868
refined
14.0102
26.4714
-2.3132
X-RAY DIFFRACTION
0.7828
-0.0643
-0.2948
0.6269
0.4861
0.7377
0.0649
0.2056
0.0178
0.2443
-0.0503
0.2614
0.2155
0.0199
-0.0000
0.4368
-0.0097
0.0362
0.2259
-0.0167
0.3137
refined
-7.1076
19.7711
36.2569
X-RAY DIFFRACTION
0.0566
0.1448
0.0502
0.2378
0.2359
0.0443
-0.9796
-0.1347
0.7467
-0.2520
0.8183
-0.1325
-0.0153
0.0657
0.0000
0.5263
-0.1467
0.0117
0.2660
0.0749
0.3384
refined
0.0606
29.2974
34.2099
X-RAY DIFFRACTION
1.1311
0.1851
-0.4170
0.3916
0.2887
0.8409
0.0125
-0.0468
-0.0169
0.2946
-0.0442
0.1671
0.1037
-0.1522
-0.0000
0.4623
0.0094
0.0025
0.1689
-0.0109
0.2819
refined
-2.3259
28.2502
43.3963
X-RAY DIFFRACTION
0.2877
0.3872
-0.1966
0.2422
0.0710
0.1148
-0.0761
0.2872
-0.1035
0.0792
-0.1493
0.2209
0.0406
0.0119
-0.0000
0.3965
0.0202
-0.1046
0.3331
-0.0159
0.3920
refined
-8.5714
20.9467
18.9714
X-RAY DIFFRACTION
1.8860
0.5735
0.3222
0.4958
0.2201
0.4416
-0.0996
-0.1509
-0.1484
0.0049
0.0724
-0.1767
0.0004
0.0162
-0.0000
0.2394
0.0274
0.0288
0.3916
0.0310
0.3273
refined
1.3549
11.0943
2.1968
X-RAY DIFFRACTION
0.1046
0.0635
0.1066
0.5609
0.0326
0.0590
0.0313
0.4560
-0.6904
0.0358
-0.1564
0.0176
0.0845
-0.5245
0.0000
0.2412
-0.0262
-0.0281
0.5165
-0.0449
0.4466
refined
-6.2000
8.2031
-2.6826
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resseq 9:26)
X-RAY DIFFRACTION
2
chain 'A' and (resseq 27:92)
X-RAY DIFFRACTION
3
chain 'A' and (resseq 93:119)
X-RAY DIFFRACTION
4
chain 'A' and (resseq 120:151)
X-RAY DIFFRACTION
5
chain 'A' and (resseq 152:188)
X-RAY DIFFRACTION
6
chain 'A' and (resseq 189:211)
X-RAY DIFFRACTION
7
chain 'B' and (resseq 1:39)
X-RAY DIFFRACTION
8
chain 'B' and (resseq 40:51)
X-RAY DIFFRACTION
9
chain 'B' and (resseq 52:101)
X-RAY DIFFRACTION
10
chain 'B' and (resseq 102:117)
X-RAY DIFFRACTION
11
chain 'B' and (resseq 118:201)
X-RAY DIFFRACTION
12
chain 'B' and (resseq 202:211)
author_and_software_defined_assembly
PISA
2
dimeric
6320
0
20670
B
ASN
103
GLYCOSYLATION SITE
A
ASN
124
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
11
B
N
ILE
3
A
O
THR
105
B
O
THR
103
A
O
GLY
101
B
O
GLY
99
A
N
TYR
86
B
N
TYR
81
A
O
ASP
85
B
O
ASP
80
A
N
HIS
38
B
N
HIS
30
A
N
TRP
35
B
N
TRP
27
A
O
ILE
48
B
O
ILE
40
A
N
ALA
19
B
N
ALA
11
A
O
ILE
75
B
O
ILE
70
A
O
THR
74
B
O
THR
69
A
N
SER
63
B
N
SER
55
A
N
THR
117
B
N
THR
115
A
O
LEU
136
B
O
LEU
134
A
N
CYS
135
B
N
CYS
133
A
O
SER
177
B
O
SER
175
A
O
TYR
178
B
O
TYR
176
A
N
GLU
161
B
N
GLU
159
A
N
THR
117
B
N
THR
115
A
O
LEU
136
B
O
LEU
134
A
N
CYS
135
B
N
CYS
133
A
O
SER
177
B
O
SER
175
A
O
ALA
174
B
O
ALA
172
A
N
SER
166
B
N
SER
164
A
O
SER
154
B
O
SER
152
A
N
ALA
151
B
N
ALA
149
A
N
THR
146
B
N
THR
144
A
O
THR
197
B
O
THR
195
A
N
VAL
196
B
N
VAL
194
A
O
VAL
203
B
O
VAL
201
B
N
SER
7
A
N
SER
7
B
O
THR
21
A
O
THR
21
B
N
CYS
22
A
N
CYS
22
B
O
VAL
78
A
O
VAL
78
B
O
GLN
77
A
O
GLN
77
B
N
ASP
72
A
N
ASP
72
B
N
VAL
12
A
N
VAL
12
B
O
THR
108
A
O
THR
129
B
O
VAL
107
A
O
VAL
128
B
N
GLY
88
A
N
GLY
91
B
O
TYR
91
A
O
TYR
94
B
N
ILE
37
A
N
ILE
37
B
N
ARG
38
A
N
ARG
38
B
O
GLU
46
A
O
GLU
46
B
N
TYR
50
A
N
TYR
50
B
O
ASN
58
A
O
ASN
58
B
N
VAL
12
A
N
VAL
12
B
O
THR
108
A
O
THR
129
B
O
VAL
107
A
O
VAL
128
B
N
GLY
88
A
N
GLY
91
B
N
LEU
96
A
N
LEU
99
O
B
O
TYR
100
A
O
TYR
118
B
N
LEU
122
A
N
LEU
143
B
O
GLY
137
A
O
GLY
158
B
N
VAL
140
A
N
VAL
161
B
O
LEU
176
A
O
LEU
197
B
O
VAL
179
A
O
VAL
200
B
N
HIS
162
A
N
HIS
183
B
N
LEU
122
A
N
LEU
143
B
O
GLY
137
A
O
GLY
158
B
N
VAL
140
A
N
VAL
161
B
O
LEU
176
A
O
LEU
197
B
O
SER
175
A
O
SER
196
B
N
VAL
167
A
N
VAL
188
B
N
THR
149
A
N
THR
170
B
O
ASN
197
A
O
ASN
218
B
N
HIS
198
A
N
HIS
219
B
O
THR
203
A
O
THR
224
1
B
LYS
212
A
LYS
233
1
Y
1
B
SER
213
A
SER
234
1
Y
1
B
CYS
214
A
CYS
235
1
Y
1
A
SER
8
B
SER
1
1
Y
1
A
CYS
212
B
CYS
210
1
Y
1
A
SER
213
B
SER
211
1
Y
1
C
C
O6
O6
GAL
SIA
6
7
2.02
1
B
C
ND2
C2
ASN
NAG
103
1
2.17
1
9.48
1.50
119.30
128.78
B
B
B
C
N
CA
ALA
PRO
PRO
123
124
124
Y
1
B
SER
15
84.56
-19.02
G
1
B
PHE
100
-69.64
12.11
1
B
PRO
124
-37.71
136.02
1
B
PHE
144
-172.55
140.11
1
A
LEU
28
-103.88
-65.96
1
A
ASN
51
67.56
-50.55
1
A
LEU
107
-68.93
74.85
1
A
ASP
152
48.24
-109.52
-3.3525
0.0000
-0.0000
10.1945
-0.0000
-6.8420
0.2341
0.1894
0.1917
2.800
19.915
870
17491
17353
5.01
99.89
0.76
1
0.00
MOLECULAR REPLACEMENT
21.65
0.73
1.00
PDB ENTRY 4JY6
ML
FLAT BULK SOLVENT MODEL
20.370
0.357
2.800
19.915
13
3466
134
0
3319
0.010
3550
1.443
4851
23.928
1299
0.201
571
0.006
597
0.3495
0.2727
2.9749
148
2681
100.00
0.2665
0.2341
3.2037
151
2674
100.00
0.2895
0.2011
3.5245
136
2726
100.00
0.2405
0.1960
4.0308
139
2748
100.00
0.1910
0.1497
5.0646
155
2760
100.00
0.2030
0.1754
19.9151
141
2894
100.00
2.8
40
4JY4
17491
17409
0
0
0.088
1
19.8
7.2
99.5
2.8
2.9
3.5
0.484
1
7.4
99.9
data collection
Blu-Ice
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.7.2_869)
data reduction
XDS
data scaling
XDS
Crystal structure of human Fab PGT121, a broadly reactive and potent HIV-1 neutralizing antibody
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
B
SER
28
A
SER
28
HELX_P
B
SER
32
A
SER
32
5
4
5
B
SER
60
A
SER
60
HELX_P
B
SER
65
A
SER
65
1
5
6
B
THR
83
A
THR
86
HELX_P
B
SER
87
A
SER
90
5
6
5
B
ILE
100
A
ILE
107
HELX_P
B
ASN
100
A
ASN
111
5
7
5
D
H
B
SER
154
A
SER
175
HELX_P
B
ALA
156
A
ALA
177
5
8
3
B
SER
185
A
SER
206
HELX_P
B
GLY
188
A
GLY
209
5
9
4
B
LYS
199
A
LYS
220
HELX_P
B
ASN
202
A
ASN
223
5
10
4
A
GLU
79
B
GLU
74
HELX_P
A
GLU
83
B
GLU
78
5
1
5
A
SER
122
B
SER
120
HELX_P
A
ALA
128
B
ALA
126
1
2
7
A
THR
182
B
THR
180
HELX_P
A
HIS
189
B
HIS
187
1
3
8
disulf
2.062
B
CYS
22
A
SG
CYS
22
1_555
B
CYS
92
A
SG
CYS
95
1_555
disulf
2.021
B
CYS
138
A
SG
CYS
159
1_555
B
CYS
194
A
SG
CYS
215
1_555
disulf
2.041
A
CYS
23
B
SG
CYS
15
1_555
A
CYS
88
B
SG
CYS
83
1_555
disulf
2.022
A
CYS
135
B
SG
CYS
133
1_555
A
CYS
194
B
SG
CYS
192
1_555
covale
1.431
one
N-Glycosylation
B
ASN
103
A
ND2
ASN
124
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.439
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.444
both
C
NAG
1
C
O6
NAG
1_555
C
FUC
9
C
C1
FUC
1_555
covale
1.431
both
C
NAG
2
C
O4
NAG
1_555
C
BMA
3
C
C1
BMA
1_555
covale
1.430
both
C
BMA
3
C
O3
BMA
1_555
C
MAN
4
C
C1
MAN
1_555
covale
1.452
both
C
BMA
3
C
O6
BMA
1_555
C
MAN
8
C
C1
MAN
1_555
covale
1.423
both
C
MAN
4
C
O2
MAN
1_555
C
NAG
5
C
C1
NAG
1_555
covale
1.424
both
C
NAG
5
C
O4
NAG
1_555
C
GAL
6
C
C1
GAL
1_555
covale
1.456
both
C
GAL
6
C
O6
GAL
1_555
C
SIA
7
C
C2
SIA
1_555
IMMUNE SYSTEM
Broadly neutralizing antibody against HIV-1, HIV-1 Env gp120 subunit, IMMUNE SYSTEM
B
PHE
144
A
PHE
165
1
B
PRO
145
A
PRO
166
-4.56
B
GLU
146
A
GLU
167
1
B
PRO
147
A
PRO
168
2.85
A
SER
67
B
SER
60
A
B
1
A
PRO
67
B
PRO
61
-0.85
A
TYR
141
B
TYR
139
1
A
PRO
142
B
PRO
140
1.84
4JY4
PDB
2
1
4JY4
SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEAD
YYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVET
TTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
4JY4
PDB
1
1
4JY4
QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSL
SLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCL
VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
8
213
4JY4
8
213
4JY4
A
1
1
211
1
214
4JY4
1
214
4JY4
B
2
1
235
5
3
4
4
4
4
6
4
4
4
3
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
11
B
ILE
3
A
VAL
13
B
VAL
5
A
GLY
99
B
GLY
97
A
VAL
106
B
VAL
104
A
ALA
84
B
ALA
79
A
ASP
92
B
ASP
87
A
ARG
31
B
ARG
23
A
HIS
38
B
HIS
30
A
SER
45
B
SER
37
A
ILE
48
B
ILE
40
A
ALA
19
B
ALA
11
A
LYS
26
B
LYS
18
A
THR
70
B
THR
65
A
ILE
75
B
ILE
70
A
PHE
62
B
PHE
54
A
SER
63
B
SER
55
A
SER
115
B
SER
113
A
PHE
119
B
PHE
117
A
ALA
131
B
ALA
129
A
PHE
140
B
PHE
138
A
TYR
173
B
TYR
171
A
LEU
181
B
LEU
179
A
VAL
160
B
VAL
158
A
THR
162
B
THR
160
A
SER
115
B
SER
113
A
PHE
119
B
PHE
117
A
ALA
131
B
ALA
129
A
PHE
140
B
PHE
138
A
TYR
173
B
TYR
171
A
LEU
181
B
LEU
179
A
SER
166
B
SER
164
A
LYS
167
B
LYS
165
A
SER
154
B
SER
152
A
PRO
155
B
PRO
153
A
THR
146
B
THR
144
A
ALA
151
B
ALA
149
A
TYR
192
B
TYR
190
A
HIS
198
B
HIS
196
A
SER
201
B
SER
199
A
VAL
207
B
VAL
205
B
GLN
3
A
GLN
3
B
SER
7
A
SER
7
B
LEU
18
A
LEU
18
B
SER
25
A
SER
25
B
GLN
77
A
GLN
77
B
LEU
82
A
LEU
82
B
VAL
67
A
VAL
67
B
ASP
72
A
ASP
72
B
LEU
11
A
LEU
11
B
VAL
12
A
VAL
12
B
THR
105
A
THR
126
B
VAL
109
A
VAL
130
B
GLY
88
A
GLY
91
B
ILE
100
A
ILE
104
A
B
TYR
33
A
TYR
33
B
ARG
39
A
ARG
39
B
LEU
45
A
LEU
45
B
VAL
51
A
VAL
51
B
ASN
58
A
ASN
58
B
TYR
59
A
TYR
59
B
LEU
11
A
LEU
11
B
VAL
12
A
VAL
12
B
THR
105
A
THR
126
B
VAL
109
A
VAL
130
B
GLY
88
A
GLY
91
B
ILE
100
A
ILE
104
A
B
TRP
100
A
TRP
113
B
TRP
101
A
TRP
122
J
B
SER
118
A
SER
139
B
SER
125
A
SER
146
B
THR
133
A
THR
154
B
TYR
143
A
TYR
164
B
TYR
174
A
TYR
195
B
PRO
183
A
PRO
204
B
VAL
161
A
VAL
182
B
THR
163
A
THR
184
B
SER
118
A
SER
139
B
SER
125
A
SER
146
B
THR
133
A
THR
154
B
TYR
143
A
TYR
164
B
TYR
174
A
TYR
195
B
PRO
183
A
PRO
204
B
VAL
167
A
VAL
188
B
LEU
168
A
LEU
189
B
THR
149
A
THR
170
B
TRP
152
A
TRP
173
B
ILE
193
A
ILE
214
B
HIS
198
A
HIS
219
B
THR
203
A
THR
224
B
ARG
208
A
ARG
229
19
P 21 21 21