0.030230
0.000000
0.000000
0.000000
0.011018
0.000000
0.000000
0.000000
0.021272
0.00000
0.00000
0.00000
Shalev, M.
Kondo, J.
Adir, N.
Baasov, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
33.080
90.760
47.010
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C20 H40 N4 O10
496.552
GENETICIN
G418
non-polymer
H2 O
18.015
WATER
non-polymer
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
R
C
N
49
N
O
N
50
R
C
N
51
N
N
N
52
N
C
N
53
N
O
N
54
N
N
N
55
N
C
N
56
N
N
N
57
N
C
N
58
N
C
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
O
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
N
C
N
79
R
C
N
80
N
O
N
81
S
C
N
82
N
O
N
83
R
C
N
84
N
O
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
N
90
N
C
N
91
N
O
N
92
N
N
N
93
N
C
N
94
N
N
N
95
N
N
Y
96
N
C
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
S
C
N
112
N
O
N
113
R
C
N
114
N
N
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
R
C
N
120
N
O
N
121
R
C
N
122
N
O
N
123
N
C
N
124
R
C
N
125
N
N
N
126
N
C
N
127
S
C
N
128
N
N
N
129
R
C
N
130
S
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
R
C
N
135
R
C
N
136
N
O
N
137
R
C
N
138
N
N
N
139
N
C
N
140
R
C
N
141
N
O
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
O
N
189
N
P
N
190
N
O
N
191
N
O
N
192
N
O
N
193
N
C
N
194
R
C
N
195
N
O
N
196
S
C
N
197
N
O
N
198
R
C
N
199
N
O
N
200
R
C
N
201
N
N
N
202
N
C
N
203
N
O
N
204
N
N
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
Y
25
N
sing
Y
26
N
sing
Y
27
N
doub
N
28
N
sing
Y
29
N
sing
Y
30
N
sing
Y
31
N
doub
N
32
N
sing
Y
33
N
doub
N
34
N
sing
N
35
N
sing
Y
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
Y
100
N
sing
Y
101
N
sing
Y
102
N
doub
N
103
N
sing
Y
104
N
sing
N
105
N
sing
Y
106
N
doub
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
110
13333
13338
10.1073/pnas.1307365110
23898171
Identification of the molecular attributes required for aminoglycoside activity against Leishmania.
2013
10.2210/pdb4k32/pdb
pdb_00004k32
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9394
1.0
ID14-4
ESRF
0.9394
SYNCHROTRON
ESRF BEAMLINE ID14-4
7356.393
RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*UP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3')
2
syn
polymer
496.552
GENETICIN
2
syn
non-polymer
18.015
water
11
nat
water
no
no
UUGCGUCGUUCCGGAAAAGUCGC
UUGCGUCGUUCCGGAAAAGUCGC
A,B
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
2
2.40
48.71
VAPOR DIFFUSION, HANGING DROP
7.0
50 mM Na cacodylate, 1 mM spermine tetrahydrochloride, 1-20% 2-methyl-2,4-pentadiol (vs. 40% reservoir), 100-200 mM KCl, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
293.15
0.852
1
19
A
3
B
46
4.523
A_G3:C46_B
1
-3.202
-0.219
0.145
-0.146
12.348
1
19
A
4
B
45
-3.791
A_C4:G45_B
2
-9.098
-0.659
-0.316
-0.213
-0.452
1
19
A
5
B
44
-0.211
A_G5:C44_B
3
-6.232
-0.033
-0.403
-0.371
6.874
A
6
B
43
-8.612
A_U6:U43_B
4
-6.427
-1.485
-0.257
-1.541
-10.177
1
19
A
7
B
42
-0.898
A_C7:G42_B
5
8.941
0.332
-0.066
-0.313
-0.189
1
20
A
9
B
39
4.296
A_U9:A39_B
6
-15.775
-0.154
0.087
-0.051
6.771
1
20
A
10
B
38
4.776
A_U10:A38_B
7
-15.019
0.228
-0.079
-0.262
4.358
1
19
A
11
B
37
2.318
A_C11:G37_B
8
-10.341
0.494
-0.084
-0.150
0.064
1
19
A
12
B
36
-1.455
A_C12:G36_B
9
-10.957
-0.122
0.039
-0.170
-3.802
1
19
A
13
B
35
-0.410
A_G13:C35_B
10
-15.273
-0.006
0.325
-0.318
-7.002
1
19
A
14
B
34
-0.778
A_G14:C34_B
11
-11.766
-0.144
0.044
-0.258
-5.084
1
20
A
15
B
33
0.145
A_A15:U33_B
12
-11.542
-0.164
0.235
-0.266
1.385
1
20
A
16
B
32
-4.975
A_A16:U32_B
13
-20.868
0.348
-0.027
-0.180
-4.069
1
19
A
19
B
30
2.746
A_G19:C30_B
14
-8.913
0.287
-0.560
-0.153
-9.046
A
20
B
29
-4.761
A_U20:U29_B
15
-12.565
2.012
-0.393
-1.482
4.381
1
19
A
21
B
28
3.727
A_C21:G28_B
16
-7.667
0.295
-0.441
-0.240
-7.443
1
19
A
22
B
27
-3.340
A_G22:C27_B
17
-7.561
0.049
0.223
-0.253
1.935
1
19
A
23
B
26
-5.067
A_C23:G26_B
18
2.996
1.160
-0.018
-0.098
3.258
29.892
A
A
3
4
-5.925
B
B
46
45
3.123
-3.048
-0.604
-2.122
AA_G3C4:G45C46_BB
1
2.547
-4.951
29.633
-3.496
1.688
2.867
37.802
A
A
4
5
23.384
B
B
45
44
3.685
14.770
0.227
-1.452
AA_C4G5:C44G45_BB
2
1.469
-2.326
34.864
-4.230
-0.153
2.996
27.867
A
A
5
6
-0.747
B
B
44
43
2.952
-0.359
-0.354
-1.875
AA_G5U6:U43C44_BB
3
-3.368
7.009
27.664
-3.814
0.000
3.484
42.292
A
A
6
7
8.269
B
B
43
42
3.874
5.948
0.865
-2.538
AA_U6C7:G42U43_BB
4
-0.699
0.972
41.885
-4.206
-1.280
2.901
34.384
A
A
9
10
8.647
B
B
39
38
3.109
5.093
-0.013
-1.210
AA_U9U10:A38A39_BB
5
-1.078
1.830
33.999
-2.782
-0.133
2.989
34.303
A
A
10
11
11.142
B
B
38
37
3.308
6.533
-0.239
-1.446
AA_U10C11:G37A38_BB
6
-1.018
1.736
33.678
-3.447
0.250
2.983
27.588
A
A
11
12
12.532
B
B
37
36
3.393
5.922
-0.604
-1.780
AA_C11C12:G36G37_BB
7
-2.695
5.704
26.824
-5.160
0.617
2.773
32.910
A
A
12
13
13.183
B
B
36
35
3.293
7.408
0.441
-2.026
AA_C12G13:C35G36_BB
8
0.324
-0.576
32.087
-4.764
-0.727
2.853
30.373
A
A
13
14
11.579
B
B
35
34
3.284
6.027
-0.188
-1.850
AA_G13G14:C34C35_BB
9
1.186
-2.278
29.760
-4.678
0.585
2.727
33.534
A
A
14
15
16.391
B
B
34
33
3.155
9.338
-0.073
-1.135
AA_G14A15:U33C34_BB
10
0.797
-1.398
32.234
-3.376
0.246
2.732
35.124
A
A
15
16
14.638
B
B
33
32
3.103
8.732
0.161
-1.161
AA_A15A16:U32U33_BB
11
3.578
-5.998
33.871
-3.111
0.220
3.321
40.125
A
A
19
20
8.889
B
B
30
29
3.631
6.075
-1.172
-2.147
AA_G19U20:U29C30_BB
12
-1.518
2.222
39.653
-3.870
1.523
2.948
24.298
A
A
20
21
-2.498
B
B
29
28
2.872
-1.051
0.422
-1.507
AA_U20C21:G28U29_BB
13
0.916
-2.177
24.258
-3.286
-0.745
3.214
32.431
A
A
21
22
12.436
B
B
28
27
3.553
6.893
-0.896
-1.453
AA_C21G22:C27G28_BB
14
-1.636
2.951
31.668
-3.871
1.302
3.058
37.861
A
A
22
23
3.920
B
B
27
26
3.124
2.538
0.650
-1.646
AA_G22C23:G26C27_BB
15
3.637
-5.618
37.610
-2.845
-0.558
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2013-07-31
1
1
2013-09-04
1
2
2024-02-28
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-04-10
REL
REL
GET
GENETICIN
HOH
water
38568
Leishmania
sample
GET
51
2
GET
GET
101
A
GET
50
2
GET
GET
101
B
HOH
2
3
HOH
HOH
201
A
HOH
3
3
HOH
HOH
202
A
HOH
7
3
HOH
HOH
203
A
HOH
8
3
HOH
HOH
204
A
HOH
10
3
HOH
HOH
205
A
HOH
11
3
HOH
HOH
206
A
HOH
1
3
HOH
HOH
201
B
HOH
4
3
HOH
HOH
202
B
HOH
5
3
HOH
HOH
203
B
HOH
6
3
HOH
HOH
204
B
HOH
9
3
HOH
HOH
205
B
n
1
1
A
n
2
2
A
G
3
n
3
G
3
A
C
4
n
4
C
4
A
G
5
n
5
G
5
A
U
6
n
6
U
6
A
C
7
n
7
C
7
A
G
8
n
8
G
8
A
U
9
n
9
U
9
A
U
10
n
10
U
10
A
C
11
n
11
C
11
A
C
12
n
12
C
12
A
G
13
n
13
G
13
A
G
14
n
14
G
14
A
A
15
n
15
A
15
A
A
16
n
16
A
16
A
A
17
n
17
A
17
A
A
18
n
18
A
18
A
G
19
n
19
G
19
A
U
20
n
20
U
20
A
C
21
n
21
C
21
A
G
22
n
22
G
22
A
C
23
n
23
C
23
A
n
1
24
B
n
2
25
B
G
26
n
3
G
26
B
C
27
n
4
C
27
B
G
28
n
5
G
28
B
U
29
n
6
U
29
B
C
30
n
7
C
30
B
G
31
n
8
G
31
B
U
32
n
9
U
32
B
U
33
n
10
U
33
B
C
34
n
11
C
34
B
C
35
n
12
C
35
B
G
36
n
13
G
36
B
G
37
n
14
G
37
B
A
38
n
15
A
38
B
A
39
n
16
A
39
B
A
40
n
17
A
40
B
A
41
n
18
A
41
B
G
42
n
19
G
42
B
U
43
n
20
U
43
B
C
44
n
21
C
44
B
G
45
n
22
G
45
B
C
46
n
23
C
46
B
author_and_software_defined_assembly
PISA
2
dimeric
4070
-49
8280
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
U
1
A
U
1
1
Y
1
A
U
2
A
U
2
1
Y
1
B
U
24
B
U
1
1
Y
1
B
U
25
B
U
2
1
Y
1
B
A
40
0.056
SIDE CHAIN
1.5826
-0.0000
0.0000
-7.1484
0.0000
5.5658
0.2445
0.2058
0.2096
2.500
23.505
429
4290
4290
10.00
81.64
0.41
1
2.04
MOLECULAR REPLACEMENT
25.06
0.90
1.11
MLHL
FLAT BULK SOLVENT MODEL
66.954
0.403
2.500
23.505
11
977
68
898
0
0.006
1137
0.954
1766
16.821
581
0.057
254
0.008
45
0.3486
0.3186
2.8616
143
1295
85.00
0.2987
0.2102
3.6033
144
1300
83.00
0.1956
0.1768
23.5060
142
1266
77.00
2.5
50
4K32
21134
4294
21.5
21.5
0.046
1
81.6
0.64
2.5
2.57
2.0
1
84.7
data collection
DNA
phasing
PHASER
refinement
PHENIX
(phenix.refine: 1.6.1_357)
data reduction
XDS
data scaling
XDS
Crystal structure of geneticin bound to the leishmanial rRNA A-site
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
hydrog
WATSON-CRICK
A
G
3
A
N1
G
3
1_555
B
C
46
B
N3
C
23
1_555
hydrog
WATSON-CRICK
A
G
3
A
N2
G
3
1_555
B
C
46
B
O2
C
23
1_555
hydrog
WATSON-CRICK
A
G
3
A
O6
G
3
1_555
B
C
46
B
N4
C
23
1_555
hydrog
WATSON-CRICK
A
C
4
A
N3
C
4
1_555
B
G
45
B
N1
G
22
1_555
hydrog
WATSON-CRICK
A
C
4
A
N4
C
4
1_555
B
G
45
B
O6
G
22
1_555
hydrog
WATSON-CRICK
A
C
4
A
O2
C
4
1_555
B
G
45
B
N2
G
22
1_555
hydrog
WATSON-CRICK
A
G
5
A
N1
G
5
1_555
B
C
44
B
N3
C
21
1_555
hydrog
WATSON-CRICK
A
G
5
A
N2
G
5
1_555
B
C
44
B
O2
C
21
1_555
hydrog
WATSON-CRICK
A
G
5
A
O6
G
5
1_555
B
C
44
B
N4
C
21
1_555
hydrog
U-U MISPAIR
A
U
6
A
O4
U
6
1_555
B
U
43
B
N3
U
20
1_555
hydrog
WATSON-CRICK
A
C
7
A
N3
C
7
1_555
B
G
42
B
N1
G
19
1_555
hydrog
WATSON-CRICK
A
C
7
A
N4
C
7
1_555
B
G
42
B
O6
G
19
1_555
hydrog
WATSON-CRICK
A
C
7
A
O2
C
7
1_555
B
G
42
B
N2
G
19
1_555
hydrog
WATSON-CRICK
A
U
9
A
N3
U
9
1_555
B
A
39
B
N1
A
16
1_555
hydrog
WATSON-CRICK
A
U
9
A
O4
U
9
1_555
B
A
39
B
N6
A
16
1_555
hydrog
WATSON-CRICK
A
U
10
A
N3
U
10
1_555
B
A
38
B
N1
A
15
1_555
hydrog
WATSON-CRICK
A
U
10
A
O4
U
10
1_555
B
A
38
B
N6
A
15
1_555
hydrog
WATSON-CRICK
A
C
11
A
N3
C
11
1_555
B
G
37
B
N1
G
14
1_555
hydrog
WATSON-CRICK
A
C
11
A
N4
C
11
1_555
B
G
37
B
O6
G
14
1_555
hydrog
WATSON-CRICK
A
C
11
A
O2
C
11
1_555
B
G
37
B
N2
G
14
1_555
hydrog
WATSON-CRICK
A
C
12
A
N3
C
12
1_555
B
G
36
B
N1
G
13
1_555
hydrog
WATSON-CRICK
A
C
12
A
N4
C
12
1_555
B
G
36
B
O6
G
13
1_555
hydrog
WATSON-CRICK
A
C
12
A
O2
C
12
1_555
B
G
36
B
N2
G
13
1_555
hydrog
WATSON-CRICK
A
G
13
A
N1
G
13
1_555
B
C
35
B
N3
C
12
1_555
hydrog
WATSON-CRICK
A
G
13
A
N2
G
13
1_555
B
C
35
B
O2
C
12
1_555
hydrog
WATSON-CRICK
A
G
13
A
O6
G
13
1_555
B
C
35
B
N4
C
12
1_555
hydrog
WATSON-CRICK
A
G
14
A
N1
G
14
1_555
B
C
34
B
N3
C
11
1_555
hydrog
WATSON-CRICK
A
G
14
A
N2
G
14
1_555
B
C
34
B
O2
C
11
1_555
hydrog
WATSON-CRICK
A
G
14
A
O6
G
14
1_555
B
C
34
B
N4
C
11
1_555
hydrog
WATSON-CRICK
A
A
15
A
N1
A
15
1_555
B
U
33
B
N3
U
10
1_555
hydrog
WATSON-CRICK
A
A
15
A
N6
A
15
1_555
B
U
33
B
O4
U
10
1_555
hydrog
WATSON-CRICK
A
A
16
A
N1
A
16
1_555
B
U
32
B
N3
U
9
1_555
hydrog
WATSON-CRICK
A
A
16
A
N6
A
16
1_555
B
U
32
B
O4
U
9
1_555
hydrog
WATSON-CRICK
A
G
19
A
N1
G
19
1_555
B
C
30
B
N3
C
7
1_555
hydrog
WATSON-CRICK
A
G
19
A
N2
G
19
1_555
B
C
30
B
O2
C
7
1_555
hydrog
WATSON-CRICK
A
G
19
A
O6
G
19
1_555
B
C
30
B
N4
C
7
1_555
hydrog
U-U MISPAIR
A
U
20
A
N3
U
20
1_555
B
U
29
B
O4
U
6
1_555
hydrog
WATSON-CRICK
A
C
21
A
N3
C
21
1_555
B
G
28
B
N1
G
5
1_555
hydrog
WATSON-CRICK
A
C
21
A
N4
C
21
1_555
B
G
28
B
O6
G
5
1_555
hydrog
WATSON-CRICK
A
C
21
A
O2
C
21
1_555
B
G
28
B
N2
G
5
1_555
hydrog
WATSON-CRICK
A
G
22
A
N1
G
22
1_555
B
C
27
B
N3
C
4
1_555
hydrog
WATSON-CRICK
A
G
22
A
N2
G
22
1_555
B
C
27
B
O2
C
4
1_555
hydrog
WATSON-CRICK
A
G
22
A
O6
G
22
1_555
B
C
27
B
N4
C
4
1_555
hydrog
WATSON-CRICK
A
C
23
A
N3
C
23
1_555
B
G
26
B
N1
G
3
1_555
hydrog
WATSON-CRICK
A
C
23
A
N4
C
23
1_555
B
G
26
B
O6
G
3
1_555
hydrog
WATSON-CRICK
A
C
23
A
O2
C
23
1_555
B
G
26
B
N2
G
3
1_555
RNA/antibiotic
rRNA duplex, Ribosomal A-site, Aminoglycoside, Leishmanial ribosome, RNA, RNA-antibiotic complex
4K32
PDB
1
4K32
1
23
4K32
1
23
4K32
A
1
1
23
24
46
4K32
24
46
4K32
B
1
1
23
BINDING SITE FOR RESIDUE GET A 101
A
GET
101
Software
11
BINDING SITE FOR RESIDUE GET B 101
B
GET
101
Software
11
A
C
4
A
C
4
11
1_555
A
G
5
A
G
5
11
1_555
A
U
6
A
U
6
11
1_555
A
C
7
A
C
7
11
1_555
A
G
8
A
G
8
11
1_555
A
U
9
A
U
9
11
1_555
B
A
39
B
A
16
11
1_555
B
A
40
B
A
17
11
1_555
B
A
41
B
A
18
11
1_555
B
G
42
B
G
19
11
1_555
B
U
43
B
U
20
11
1_555
A
A
16
A
A
16
11
1_555
A
A
17
A
A
17
11
1_555
A
A
18
A
A
18
11
1_555
A
G
19
A
G
19
11
1_555
A
U
20
A
U
20
11
1_555
B
C
27
B
C
4
11
1_555
B
G
28
B
G
5
11
1_555
B
U
29
B
U
6
11
1_555
B
C
30
B
C
7
11
1_555
B
G
31
B
G
8
11
1_555
B
U
32
B
U
9
11
1_555
18
P 21 21 2