0.011524 0.000000 0.000000 -0.000000 0.011524 0.000000 0.000000 -0.000000 0.011678 0.000000 0.000000 0.000000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.000 90.000 90.000 86.773 86.773 85.633 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of a hypothetical protein (BACUNI_01296) from Bacteroides uniformis ATCC 8492 at 1.70 A resolution 10.2210/pdb4k61/pdb pdb_00004k61 100 1 Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing) PIXEL 2013-03-21 DECTRIS PILATUS 6M single crystal Si(111) bent MAD M x-ray 1 0.97926 1.0 0.91837 1.0 BL11-1 SSRL 0.97926,0.91837 SYNCHROTRON SSRL BEAMLINE BL11-1 16068.989 Uncharacterized protein 2 man polymer 18.015 water 260 nat water no yes GDWAPADVQAALKK(MSE)YPTADGVAWSHDESYYVADFL(MSE)NGFDTKVWFDGQAQWV(MSE)QQTDWET(MSE)DE VPPAVYNAFAASEYSGG(MSE)VQNVTWVQFPKWQSIVAVEVG(MSE)ANLQTKYQILFTPTGEIIRARNVTYTYNPLGA ATFL GDWAPADVQAALKKMYPTADGVAWSHDESYYVADFLMNGFDTKVWFDGQAQWVMQQTDWETMDEVPPAVYNAFAASEYSG GMVQNVTWVQFPKWQSIVAVEVGMANLQTKYQILFTPTGEIIRARNVTYTYNPLGAATFL A,B JCSG-417914 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 8492 sample BACUNI_01296 411479 Bacteroides uniformis 562 Escherichia Coli PB1 Plasmid SpeedET 1 2.51 50.95 VAPOR DIFFUSION, SITTING DROP 4.5 0.05M calcium acetate, 40% 1,2-propanediol, 0.1M sodium acetate pH 4.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K 293 Joint Center for Structural Genomics JCSG PSI:Biology software citation_author database_2 struct_conn struct_ref_seq_dif repository Initial release Structure summary Refinement description Database references Database references Derived calculations 1 0 2013-05-01 1 1 2014-12-24 1 2 2017-11-15 1 3 2018-01-24 1 4 2023-02-01 _software.classification _software.name _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details Y RCSB Y RCSB 2013-04-15 REL REL HOH water THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 22-160 OF THE TARGET SEQUENCE. HOH 200 2 HOH HOH 201 A HOH 204 2 HOH HOH 202 A HOH 206 2 HOH HOH 203 A HOH 207 2 HOH HOH 204 A HOH 208 2 HOH HOH 205 A HOH 211 2 HOH HOH 206 A HOH 212 2 HOH HOH 207 A HOH 215 2 HOH HOH 208 A HOH 219 2 HOH HOH 209 A HOH 220 2 HOH HOH 210 A HOH 221 2 HOH HOH 211 A HOH 224 2 HOH HOH 212 A HOH 225 2 HOH HOH 213 A HOH 228 2 HOH HOH 214 A HOH 231 2 HOH HOH 215 A HOH 233 2 HOH HOH 216 A HOH 234 2 HOH HOH 217 A HOH 238 2 HOH HOH 218 A HOH 239 2 HOH HOH 219 A HOH 240 2 HOH HOH 220 A HOH 242 2 HOH HOH 221 A HOH 245 2 HOH HOH 222 A HOH 246 2 HOH HOH 223 A HOH 248 2 HOH HOH 224 A HOH 250 2 HOH HOH 225 A HOH 251 2 HOH HOH 226 A HOH 254 2 HOH HOH 227 A HOH 255 2 HOH HOH 228 A HOH 256 2 HOH HOH 229 A HOH 258 2 HOH HOH 230 A HOH 260 2 HOH HOH 231 A HOH 262 2 HOH HOH 232 A HOH 263 2 HOH HOH 233 A HOH 265 2 HOH HOH 234 A HOH 266 2 HOH HOH 235 A HOH 268 2 HOH HOH 236 A HOH 269 2 HOH HOH 237 A HOH 270 2 HOH HOH 238 A HOH 271 2 HOH HOH 239 A HOH 272 2 HOH HOH 240 A HOH 274 2 HOH HOH 241 A HOH 276 2 HOH HOH 242 A HOH 278 2 HOH HOH 243 A HOH 281 2 HOH HOH 244 A HOH 282 2 HOH HOH 245 A HOH 283 2 HOH HOH 246 A HOH 285 2 HOH HOH 247 A HOH 288 2 HOH HOH 248 A HOH 291 2 HOH HOH 249 A HOH 295 2 HOH HOH 250 A HOH 296 2 HOH HOH 251 A HOH 298 2 HOH HOH 252 A HOH 299 2 HOH HOH 253 A HOH 300 2 HOH HOH 254 A HOH 301 2 HOH HOH 255 A HOH 302 2 HOH HOH 256 A HOH 303 2 HOH HOH 257 A HOH 304 2 HOH HOH 258 A HOH 307 2 HOH HOH 259 A HOH 308 2 HOH HOH 260 A HOH 309 2 HOH HOH 261 A HOH 313 2 HOH HOH 262 A HOH 317 2 HOH HOH 263 A HOH 319 2 HOH HOH 264 A HOH 320 2 HOH HOH 265 A HOH 321 2 HOH HOH 266 A HOH 330 2 HOH HOH 267 A HOH 331 2 HOH HOH 268 A HOH 333 2 HOH HOH 269 A HOH 334 2 HOH HOH 270 A HOH 337 2 HOH HOH 271 A HOH 340 2 HOH HOH 272 A HOH 341 2 HOH HOH 273 A HOH 342 2 HOH HOH 274 A HOH 343 2 HOH HOH 275 A HOH 344 2 HOH HOH 276 A HOH 346 2 HOH HOH 277 A HOH 348 2 HOH HOH 278 A HOH 350 2 HOH HOH 279 A HOH 351 2 HOH HOH 280 A HOH 352 2 HOH HOH 281 A HOH 354 2 HOH HOH 282 A HOH 356 2 HOH HOH 283 A HOH 359 2 HOH HOH 284 A HOH 361 2 HOH HOH 285 A HOH 362 2 HOH HOH 286 A HOH 363 2 HOH HOH 287 A HOH 364 2 HOH HOH 288 A HOH 365 2 HOH HOH 289 A HOH 366 2 HOH HOH 290 A HOH 368 2 HOH HOH 291 A HOH 370 2 HOH HOH 292 A HOH 372 2 HOH HOH 293 A HOH 373 2 HOH HOH 294 A HOH 375 2 HOH HOH 295 A HOH 376 2 HOH HOH 296 A HOH 378 2 HOH HOH 297 A HOH 381 2 HOH HOH 298 A HOH 383 2 HOH HOH 299 A HOH 384 2 HOH HOH 300 A HOH 385 2 HOH HOH 301 A HOH 386 2 HOH HOH 302 A HOH 387 2 HOH HOH 303 A HOH 388 2 HOH HOH 304 A HOH 389 2 HOH HOH 305 A HOH 391 2 HOH HOH 306 A HOH 392 2 HOH HOH 307 A HOH 394 2 HOH HOH 308 A HOH 395 2 HOH HOH 309 A HOH 396 2 HOH HOH 310 A HOH 397 2 HOH HOH 311 A HOH 398 2 HOH HOH 312 A HOH 399 2 HOH HOH 313 A HOH 400 2 HOH HOH 314 A HOH 406 2 HOH HOH 315 A HOH 407 2 HOH HOH 316 A HOH 408 2 HOH HOH 317 A HOH 411 2 HOH HOH 318 A HOH 412 2 HOH HOH 319 A HOH 413 2 HOH HOH 320 A HOH 414 2 HOH HOH 321 A HOH 415 2 HOH HOH 322 A HOH 416 2 HOH HOH 323 A HOH 417 2 HOH HOH 324 A HOH 420 2 HOH HOH 325 A HOH 421 2 HOH HOH 326 A HOH 425 2 HOH HOH 327 A HOH 427 2 HOH HOH 328 A HOH 431 2 HOH HOH 329 A HOH 433 2 HOH HOH 330 A HOH 434 2 HOH HOH 331 A HOH 435 2 HOH HOH 332 A HOH 436 2 HOH HOH 333 A HOH 437 2 HOH HOH 334 A HOH 438 2 HOH HOH 335 A HOH 439 2 HOH HOH 336 A HOH 440 2 HOH HOH 337 A HOH 443 2 HOH HOH 338 A HOH 446 2 HOH HOH 339 A HOH 447 2 HOH HOH 340 A HOH 448 2 HOH HOH 341 A HOH 450 2 HOH HOH 342 A HOH 452 2 HOH HOH 343 A HOH 453 2 HOH HOH 344 A HOH 454 2 HOH HOH 345 A HOH 456 2 HOH HOH 346 A HOH 459 2 HOH HOH 347 A HOH 201 2 HOH HOH 201 B HOH 202 2 HOH HOH 202 B HOH 203 2 HOH HOH 203 B HOH 205 2 HOH HOH 204 B HOH 209 2 HOH HOH 205 B HOH 210 2 HOH HOH 206 B HOH 213 2 HOH HOH 207 B HOH 214 2 HOH HOH 208 B HOH 216 2 HOH HOH 209 B HOH 217 2 HOH HOH 210 B HOH 218 2 HOH HOH 211 B HOH 222 2 HOH HOH 212 B HOH 223 2 HOH HOH 213 B HOH 226 2 HOH HOH 214 B HOH 227 2 HOH HOH 215 B HOH 229 2 HOH HOH 216 B HOH 230 2 HOH HOH 217 B HOH 232 2 HOH HOH 218 B HOH 235 2 HOH HOH 219 B HOH 236 2 HOH HOH 220 B HOH 237 2 HOH HOH 221 B HOH 241 2 HOH HOH 222 B HOH 243 2 HOH HOH 223 B HOH 244 2 HOH HOH 224 B HOH 247 2 HOH HOH 225 B HOH 249 2 HOH HOH 226 B HOH 252 2 HOH HOH 227 B HOH 253 2 HOH HOH 228 B HOH 257 2 HOH HOH 229 B HOH 259 2 HOH HOH 230 B HOH 261 2 HOH HOH 231 B HOH 264 2 HOH HOH 232 B HOH 267 2 HOH HOH 233 B HOH 273 2 HOH HOH 234 B HOH 275 2 HOH HOH 235 B HOH 277 2 HOH HOH 236 B HOH 279 2 HOH HOH 237 B HOH 280 2 HOH HOH 238 B HOH 284 2 HOH HOH 239 B HOH 286 2 HOH HOH 240 B HOH 287 2 HOH HOH 241 B HOH 289 2 HOH HOH 242 B HOH 290 2 HOH HOH 243 B HOH 292 2 HOH HOH 244 B HOH 293 2 HOH HOH 245 B HOH 294 2 HOH HOH 246 B HOH 297 2 HOH HOH 247 B HOH 305 2 HOH HOH 248 B HOH 306 2 HOH HOH 249 B HOH 310 2 HOH HOH 250 B HOH 311 2 HOH HOH 251 B HOH 312 2 HOH HOH 252 B HOH 314 2 HOH HOH 253 B HOH 315 2 HOH HOH 254 B HOH 316 2 HOH HOH 255 B HOH 318 2 HOH HOH 256 B HOH 322 2 HOH HOH 257 B HOH 323 2 HOH HOH 258 B HOH 324 2 HOH HOH 259 B HOH 325 2 HOH HOH 260 B HOH 326 2 HOH HOH 261 B HOH 327 2 HOH HOH 262 B HOH 328 2 HOH HOH 263 B HOH 329 2 HOH HOH 264 B HOH 332 2 HOH HOH 265 B HOH 335 2 HOH HOH 266 B HOH 336 2 HOH HOH 267 B HOH 338 2 HOH HOH 268 B HOH 339 2 HOH HOH 269 B HOH 345 2 HOH HOH 270 B HOH 347 2 HOH HOH 271 B HOH 349 2 HOH HOH 272 B HOH 353 2 HOH HOH 273 B HOH 355 2 HOH HOH 274 B HOH 357 2 HOH HOH 275 B HOH 358 2 HOH HOH 276 B HOH 360 2 HOH HOH 277 B HOH 367 2 HOH HOH 278 B HOH 369 2 HOH HOH 279 B HOH 371 2 HOH HOH 280 B HOH 374 2 HOH HOH 281 B HOH 377 2 HOH HOH 282 B HOH 379 2 HOH HOH 283 B HOH 380 2 HOH HOH 284 B HOH 382 2 HOH HOH 285 B HOH 390 2 HOH HOH 286 B HOH 393 2 HOH HOH 287 B HOH 401 2 HOH HOH 288 B HOH 402 2 HOH HOH 289 B HOH 403 2 HOH HOH 290 B HOH 404 2 HOH HOH 291 B HOH 405 2 HOH HOH 292 B HOH 409 2 HOH HOH 293 B HOH 410 2 HOH HOH 294 B HOH 418 2 HOH HOH 295 B HOH 419 2 HOH HOH 296 B HOH 422 2 HOH HOH 297 B HOH 423 2 HOH HOH 298 B HOH 424 2 HOH HOH 299 B HOH 426 2 HOH HOH 300 B HOH 428 2 HOH HOH 301 B HOH 429 2 HOH HOH 302 B HOH 430 2 HOH HOH 303 B HOH 432 2 HOH HOH 304 B HOH 441 2 HOH HOH 305 B HOH 442 2 HOH HOH 306 B HOH 444 2 HOH HOH 307 B HOH 445 2 HOH HOH 308 B HOH 449 2 HOH HOH 309 B HOH 451 2 HOH HOH 310 B HOH 455 2 HOH HOH 311 B HOH 457 2 HOH HOH 312 B HOH 458 2 HOH HOH 313 B GLY 0 n 1 GLY 0 A ASP 22 n 2 ASP 22 A TRP 23 n 3 TRP 23 A ALA 24 n 4 ALA 24 A PRO 25 n 5 PRO 25 A ALA 26 n 6 ALA 26 A ASP 27 n 7 ASP 27 A VAL 28 n 8 VAL 28 A GLN 29 n 9 GLN 29 A ALA 30 n 10 ALA 30 A ALA 31 n 11 ALA 31 A LEU 32 n 12 LEU 32 A LYS 33 n 13 LYS 33 A LYS 34 n 14 LYS 34 A MSE 35 n 15 MSE 35 A TYR 36 n 16 TYR 36 A PRO 37 n 17 PRO 37 A THR 38 n 18 THR 38 A ALA 39 n 19 ALA 39 A ASP 40 n 20 ASP 40 A GLY 41 n 21 GLY 41 A VAL 42 n 22 VAL 42 A ALA 43 n 23 ALA 43 A TRP 44 n 24 TRP 44 A SER 45 n 25 SER 45 A HIS 46 n 26 HIS 46 A ASP 47 n 27 ASP 47 A GLU 48 n 28 GLU 48 A SER 49 n 29 SER 49 A TYR 50 n 30 TYR 50 A TYR 51 n 31 TYR 51 A VAL 52 n 32 VAL 52 A ALA 53 n 33 ALA 53 A ASP 54 n 34 ASP 54 A PHE 55 n 35 PHE 55 A LEU 56 n 36 LEU 56 A MSE 57 n 37 MSE 57 A ASN 58 n 38 ASN 58 A GLY 59 n 39 GLY 59 A PHE 60 n 40 PHE 60 A ASP 61 n 41 ASP 61 A THR 62 n 42 THR 62 A LYS 63 n 43 LYS 63 A VAL 64 n 44 VAL 64 A TRP 65 n 45 TRP 65 A PHE 66 n 46 PHE 66 A ASP 67 n 47 ASP 67 A GLY 68 n 48 GLY 68 A GLN 69 n 49 GLN 69 A ALA 70 n 50 ALA 70 A GLN 71 n 51 GLN 71 A TRP 72 n 52 TRP 72 A VAL 73 n 53 VAL 73 A MSE 74 n 54 MSE 74 A GLN 75 n 55 GLN 75 A GLN 76 n 56 GLN 76 A THR 77 n 57 THR 77 A ASP 78 n 58 ASP 78 A TRP 79 n 59 TRP 79 A GLU 80 n 60 GLU 80 A THR 81 n 61 THR 81 A MSE 82 n 62 MSE 82 A ASP 83 n 63 ASP 83 A GLU 84 n 64 GLU 84 A VAL 85 n 65 VAL 85 A PRO 86 n 66 PRO 86 A PRO 87 n 67 PRO 87 A ALA 88 n 68 ALA 88 A VAL 89 n 69 VAL 89 A TYR 90 n 70 TYR 90 A ASN 91 n 71 ASN 91 A ALA 92 n 72 ALA 92 A PHE 93 n 73 PHE 93 A ALA 94 n 74 ALA 94 A ALA 95 n 75 ALA 95 A SER 96 n 76 SER 96 A GLU 97 n 77 GLU 97 A TYR 98 n 78 TYR 98 A SER 99 n 79 SER 99 A GLY 100 n 80 GLY 100 A GLY 101 n 81 GLY 101 A MSE 102 n 82 MSE 102 A VAL 103 n 83 VAL 103 A GLN 104 n 84 GLN 104 A ASN 105 n 85 ASN 105 A VAL 106 n 86 VAL 106 A THR 107 n 87 THR 107 A TRP 108 n 88 TRP 108 A VAL 109 n 89 VAL 109 A GLN 110 n 90 GLN 110 A PHE 111 n 91 PHE 111 A PRO 112 n 92 PRO 112 A LYS 113 n 93 LYS 113 A TRP 114 n 94 TRP 114 A GLN 115 n 95 GLN 115 A SER 116 n 96 SER 116 A ILE 117 n 97 ILE 117 A VAL 118 n 98 VAL 118 A ALA 119 n 99 ALA 119 A VAL 120 n 100 VAL 120 A GLU 121 n 101 GLU 121 A VAL 122 n 102 VAL 122 A GLY 123 n 103 GLY 123 A MSE 124 n 104 MSE 124 A ALA 125 n 105 ALA 125 A ASN 126 n 106 ASN 126 A LEU 127 n 107 LEU 127 A GLN 128 n 108 GLN 128 A THR 129 n 109 THR 129 A LYS 130 n 110 LYS 130 A TYR 131 n 111 TYR 131 A GLN 132 n 112 GLN 132 A ILE 133 n 113 ILE 133 A LEU 134 n 114 LEU 134 A PHE 135 n 115 PHE 135 A THR 136 n 116 THR 136 A PRO 137 n 117 PRO 137 A THR 138 n 118 THR 138 A GLY 139 n 119 GLY 139 A GLU 140 n 120 GLU 140 A ILE 141 n 121 ILE 141 A ILE 142 n 122 ILE 142 A ARG 143 n 123 ARG 143 A ALA 144 n 124 ALA 144 A ARG 145 n 125 ARG 145 A ASN 146 n 126 ASN 146 A VAL 147 n 127 VAL 147 A THR 148 n 128 THR 148 A TYR 149 n 129 TYR 149 A THR 150 n 130 THR 150 A TYR 151 n 131 TYR 151 A ASN 152 n 132 ASN 152 A PRO 153 n 133 PRO 153 A LEU 154 n 134 LEU 154 A GLY 155 n 135 GLY 155 A ALA 156 n 136 ALA 156 A ALA 157 n 137 ALA 157 A THR 158 n 138 THR 158 A PHE 159 n 139 PHE 159 A LEU 160 n 140 LEU 160 A n 1 0 B n 2 22 B TRP 23 n 3 TRP 23 B ALA 24 n 4 ALA 24 B PRO 25 n 5 PRO 25 B ALA 26 n 6 ALA 26 B ASP 27 n 7 ASP 27 B VAL 28 n 8 VAL 28 B GLN 29 n 9 GLN 29 B ALA 30 n 10 ALA 30 B ALA 31 n 11 ALA 31 B LEU 32 n 12 LEU 32 B LYS 33 n 13 LYS 33 B LYS 34 n 14 LYS 34 B MSE 35 n 15 MSE 35 B TYR 36 n 16 TYR 36 B PRO 37 n 17 PRO 37 B THR 38 n 18 THR 38 B ALA 39 n 19 ALA 39 B ASP 40 n 20 ASP 40 B GLY 41 n 21 GLY 41 B VAL 42 n 22 VAL 42 B ALA 43 n 23 ALA 43 B TRP 44 n 24 TRP 44 B SER 45 n 25 SER 45 B HIS 46 n 26 HIS 46 B ASP 47 n 27 ASP 47 B GLU 48 n 28 GLU 48 B SER 49 n 29 SER 49 B TYR 50 n 30 TYR 50 B TYR 51 n 31 TYR 51 B VAL 52 n 32 VAL 52 B ALA 53 n 33 ALA 53 B ASP 54 n 34 ASP 54 B PHE 55 n 35 PHE 55 B LEU 56 n 36 LEU 56 B MSE 57 n 37 MSE 57 B ASN 58 n 38 ASN 58 B GLY 59 n 39 GLY 59 B PHE 60 n 40 PHE 60 B ASP 61 n 41 ASP 61 B THR 62 n 42 THR 62 B LYS 63 n 43 LYS 63 B VAL 64 n 44 VAL 64 B TRP 65 n 45 TRP 65 B PHE 66 n 46 PHE 66 B ASP 67 n 47 ASP 67 B GLY 68 n 48 GLY 68 B GLN 69 n 49 GLN 69 B ALA 70 n 50 ALA 70 B GLN 71 n 51 GLN 71 B TRP 72 n 52 TRP 72 B VAL 73 n 53 VAL 73 B MSE 74 n 54 MSE 74 B GLN 75 n 55 GLN 75 B GLN 76 n 56 GLN 76 B THR 77 n 57 THR 77 B ASP 78 n 58 ASP 78 B TRP 79 n 59 TRP 79 B GLU 80 n 60 GLU 80 B THR 81 n 61 THR 81 B MSE 82 n 62 MSE 82 B ASP 83 n 63 ASP 83 B GLU 84 n 64 GLU 84 B VAL 85 n 65 VAL 85 B PRO 86 n 66 PRO 86 B PRO 87 n 67 PRO 87 B ALA 88 n 68 ALA 88 B VAL 89 n 69 VAL 89 B TYR 90 n 70 TYR 90 B ASN 91 n 71 ASN 91 B ALA 92 n 72 ALA 92 B PHE 93 n 73 PHE 93 B ALA 94 n 74 ALA 94 B ALA 95 n 75 ALA 95 B SER 96 n 76 SER 96 B GLU 97 n 77 GLU 97 B TYR 98 n 78 TYR 98 B SER 99 n 79 SER 99 B GLY 100 n 80 GLY 100 B GLY 101 n 81 GLY 101 B MSE 102 n 82 MSE 102 B VAL 103 n 83 VAL 103 B GLN 104 n 84 GLN 104 B ASN 105 n 85 ASN 105 B VAL 106 n 86 VAL 106 B THR 107 n 87 THR 107 B TRP 108 n 88 TRP 108 B VAL 109 n 89 VAL 109 B GLN 110 n 90 GLN 110 B PHE 111 n 91 PHE 111 B PRO 112 n 92 PRO 112 B LYS 113 n 93 LYS 113 B TRP 114 n 94 TRP 114 B GLN 115 n 95 GLN 115 B SER 116 n 96 SER 116 B ILE 117 n 97 ILE 117 B VAL 118 n 98 VAL 118 B ALA 119 n 99 ALA 119 B VAL 120 n 100 VAL 120 B GLU 121 n 101 GLU 121 B VAL 122 n 102 VAL 122 B GLY 123 n 103 GLY 123 B MSE 124 n 104 MSE 124 B ALA 125 n 105 ALA 125 B ASN 126 n 106 ASN 126 B LEU 127 n 107 LEU 127 B GLN 128 n 108 GLN 128 B THR 129 n 109 THR 129 B LYS 130 n 110 LYS 130 B TYR 131 n 111 TYR 131 B GLN 132 n 112 GLN 132 B ILE 133 n 113 ILE 133 B LEU 134 n 114 LEU 134 B PHE 135 n 115 PHE 135 B THR 136 n 116 THR 136 B PRO 137 n 117 PRO 137 B THR 138 n 118 THR 138 B GLY 139 n 119 GLY 139 B GLU 140 n 120 GLU 140 B ILE 141 n 121 ILE 141 B ILE 142 n 122 ILE 142 B ARG 143 n 123 ARG 143 B ALA 144 n 124 ALA 144 B ARG 145 n 125 ARG 145 B ASN 146 n 126 ASN 146 B VAL 147 n 127 VAL 147 B THR 148 n 128 THR 148 B TYR 149 n 129 TYR 149 B THR 150 n 130 THR 150 B TYR 151 n 131 TYR 151 B ASN 152 n 132 ASN 152 B PRO 153 n 133 PRO 153 B LEU 154 n 134 LEU 154 B GLY 155 n 135 GLY 155 B ALA 156 n 136 ALA 156 B ALA 157 n 137 ALA 157 B THR 158 n 138 THR 158 B PHE 159 n 139 PHE 159 B LEU 160 n 140 LEU 160 B 0.3300 0.1082 -0.9861 1.1361 1.3726 6.8520 -0.0266 0.0267 -0.0427 -0.0374 -0.1311 0.0229 -0.1970 -0.5791 0.1577 0.0516 0.0402 0.0057 0.1009 0.0051 0.2356 refined 15.8510 10.7250 14.0000 X-RAY DIFFRACTION 1.2200 -0.0678 0.9359 2.3711 0.5995 5.1688 -0.1961 -0.0173 0.2500 -0.4450 0.0021 0.0924 -0.2793 -0.4462 0.1940 0.1630 -0.0299 -0.0870 0.0962 -0.0137 0.2885 refined 13.9340 31.8220 28.3100 X-RAY DIFFRACTION A 0 A 160 X-RAY DIFFRACTION 1 B 23 B 160 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric A MSE 35 SELENOMETHIONINE A MSE 15 MET A MSE 57 SELENOMETHIONINE A MSE 37 MET A MSE 74 SELENOMETHIONINE A MSE 54 MET A MSE 82 SELENOMETHIONINE A MSE 62 MET A MSE 102 SELENOMETHIONINE A MSE 82 MET A MSE 124 SELENOMETHIONINE A MSE 104 MET B MSE 35 SELENOMETHIONINE B MSE 15 MET B MSE 57 SELENOMETHIONINE B MSE 37 MET B MSE 74 SELENOMETHIONINE B MSE 54 MET B MSE 82 SELENOMETHIONINE B MSE 62 MET B MSE 102 SELENOMETHIONINE B MSE 82 MET B MSE 124 SELENOMETHIONINE B MSE 104 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 45 A N SER 25 A O VAL 52 A O VAL 32 A N PHE 55 A N PHE 35 A O THR 62 A O THR 42 A N TRP 65 A N TRP 45 A O MSE 74 A O MSE 54 A N GLN 75 A N GLN 55 A O GLN 110 A O GLN 90 A N MSE 102 A N MSE 82 A O GLY 123 A O GLY 103 A N VAL 120 A N VAL 100 A O ILE 133 A O ILE 113 A N LEU 134 A N LEU 114 A O ARG 143 A O ARG 123 B N SER 45 B N SER 25 B O VAL 52 B O VAL 32 B N TYR 51 B N TYR 31 B O PHE 66 B O PHE 46 B N TRP 65 B N TRP 45 B O MSE 74 B O MSE 54 B N GLN 75 B N GLN 55 B O GLN 110 B O GLN 90 B N MSE 102 B N MSE 82 B O GLY 123 B O GLY 103 B N VAL 120 B N VAL 100 B O ILE 133 B O ILE 113 B N LEU 134 B N LEU 114 B O ARG 143 B O ARG 123 1 B GLY 0 B GLY 1 1 Y 1 B ASP 22 B ASP 2 1 Y 1 A A ASN LEU 126 127 147.12 1 A TRP 23 66.69 -56.50 1 A GLU 48 37.07 -107.18 1 A GLU 80 74.54 -45.24 1 A ASN 126 -92.76 49.28 1 A LEU 127 71.93 -71.64 1 B GLU 48 52.31 -128.80 1 B GLU 80 71.65 -46.21 1 B ASN 126 -66.68 62.96 1 B LEU 127 58.88 -77.47 131.050 37.9645 16.140 1.5500 0.0000 0.0000 1.5500 -0.0000 -3.0900 0.9640 0.9570 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 0.2120 0.1897 0.1909 1.7000 27.440 1745 34780 5.0000 99.7000 1.000 0.300 5.5730 0.0900 RANDOM 1 THROUGHOUT 0.000 MAD 0.1100 0.1020 0.8000 0.8000 1.2000 MAXIMUM LIKELIHOOD WITH PHASES BABINET MODEL WITH MASK 1.7000 27.440 260 2480 0 0 2220 0.010 0.020 2365 0.004 0.020 2118 1.392 1.926 3253 1.012 3.000 4868 6.375 5.000 296 39.971 25.000 118 14.433 15.000 309 11.117 15.000 6 0.086 0.200 341 0.007 0.021 2764 0.004 0.020 592 2.393 2.639 1130 2.393 2.639 1129 3.889 4.915 1414 0.3210 0.2930 1.7440 129 2397 2526 20 99.1800 25.537 1.70 27.440 4K61 34782 -3.000 0.046 1 13.290 97.600 0.788 1.700 1.760 1.5 17932 6341 1 93.200 0.594 1.760 1.830 2.0 19269 6734 1 97.900 0.363 1.830 1.910 3.2 18109 6464 1 97.700 0.231 1.910 2.020 4.7 19326 7365 1 97.400 0.154 2.020 2.140 7.2 19152 6414 1 98.000 0.108 2.140 2.310 9.9 20323 6908 1 98.300 0.074 2.310 2.540 13.6 19520 6773 1 99.000 0.052 2.540 2.900 18.0 17480 6665 1 97.900 0.030 2.900 3.660 30.8 20449 6851 1 98.400 0.022 3.660 41.2 19168 6775 1 97.800 model building D.C. & J.S. Richardson lab molprobity@kinemage.biochem.duke.edu http://kinemage.biochem.duke.edu/molprobity/ MolProbity package 3beta29 data extraction PDB deposit@deposit.rcsb.org June 10, 2010 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.10 phasing George M. Sheldrick gsheldr@shelx.uni-ac.gwdg.de Fortran_77 http://shelx.uni-ac.gwdg.de/SHELX/ SHELX package phasing Eric de La Fortelle sharp-develop@globalphasing.com http://www.globalphasing.com/sharp/ SHARP package data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package July 4, 2012 refinement Garib N. Murshudov garib@ysbl.york.ac.uk Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html REFMAC program 5.7.0032 data reduction XDS phasing SHELXD Crystal structure of a DUF2874 family protein (BACUNI_01296) from Bacteroides uniformis ATCC 8492 at 1.70 A resolution 1 N N 1 N N 2 N N 2 N N CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. A PRO 25 A PRO 5 HELX_P A TYR 36 A TYR 16 1 1 12 A THR 81 A THR 61 HELX_P A VAL 85 A VAL 65 5 2 5 A PRO 86 A PRO 66 HELX_P A SER 96 A SER 76 1 3 11 A GLU 97 A GLU 77 HELX_P A GLY 101 A GLY 81 5 4 5 A GLY 155 A GLY 135 HELX_P A LEU 160 A LEU 140 1 5 6 B PRO 25 B PRO 5 HELX_P B TYR 36 B TYR 16 1 6 12 B THR 81 B THR 61 HELX_P B VAL 85 B VAL 65 5 7 5 B PRO 86 B PRO 66 HELX_P B SER 96 B SER 76 1 8 11 B GLU 97 B GLU 77 HELX_P B GLY 101 B GLY 81 5 9 5 B GLY 155 B GLY 135 HELX_P B LEU 160 B LEU 140 1 10 6 covale 1.335 both A LYS 34 A C LYS 14 1_555 A MSE 35 A N MSE 15 1_555 covale 1.325 both A MSE 35 A C MSE 15 1_555 A TYR 36 A N TYR 16 1_555 covale 1.332 both A LEU 56 A C LEU 36 1_555 A MSE 57 A N MSE 37 1_555 covale 1.330 both A MSE 57 A C MSE 37 1_555 A ASN 58 A N ASN 38 1_555 covale 1.331 both A VAL 73 A C VAL 53 1_555 A MSE 74 A N MSE 54 1_555 covale 1.332 both A MSE 74 A C MSE 54 1_555 A GLN 75 A N GLN 55 1_555 covale 1.333 both A THR 81 A C THR 61 1_555 A MSE 82 A N MSE 62 1_555 covale 1.338 both A MSE 82 A C MSE 62 1_555 A ASP 83 A N ASP 63 1_555 covale 1.325 both A GLY 101 A C GLY 81 1_555 A MSE 102 A N MSE 82 1_555 covale 1.332 both A MSE 102 A C MSE 82 1_555 A VAL 103 A N VAL 83 1_555 covale 1.333 both A GLY 123 A C GLY 103 1_555 A MSE 124 A N MSE 104 1_555 covale 1.336 both A MSE 124 A C MSE 104 1_555 A ALA 125 A N ALA 105 1_555 covale 1.331 both B LYS 34 B C LYS 14 1_555 B MSE 35 B N MSE 15 1_555 covale 1.330 both B MSE 35 B C MSE 15 1_555 B TYR 36 B N TYR 16 1_555 covale 1.328 both B LEU 56 B C LEU 36 1_555 B MSE 57 B N MSE 37 1_555 covale 1.345 both B MSE 57 B C MSE 37 1_555 B ASN 58 B N ASN 38 1_555 covale 1.333 both B VAL 73 B C VAL 53 1_555 B MSE 74 B N MSE 54 1_555 covale 1.323 both B MSE 74 B C MSE 54 1_555 B GLN 75 B N GLN 55 1_555 covale 1.334 both B THR 81 B C THR 61 1_555 B MSE 82 B N MSE 62 1_555 covale 1.338 both B MSE 82 B C MSE 62 1_555 B ASP 83 B N ASP 63 1_555 covale 1.327 both B GLY 101 B C GLY 81 1_555 B MSE 102 B N MSE 82 1_555 covale 1.326 both B MSE 102 B C MSE 82 1_555 B VAL 103 B N VAL 83 1_555 covale 1.327 both B GLY 123 B C GLY 103 1_555 B MSE 124 B N MSE 104 1_555 covale 1.333 both B MSE 124 B C MSE 104 1_555 B ALA 125 B N ALA 105 1_555 STRUCTURAL GENOMICS, UNKNOWN FUNCTION DUF2874, PF11396 family protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION A7V158_BACUN UNP 1 22 A7V158 DWAPADVQAALKKMYPTADGVAWSHDESYYVADFLMNGFDTKVWFDGQAQWVMQQTDWETMDEVPPAVYNAFAASEYSGG MVQNVTWVQFPKWQSIVAVEVGMANLQTKYQILFTPTGEIIRARNVTYTYNPLGAATFL 22 160 4K61 22 160 A7V158 A 1 2 140 22 160 4K61 22 160 A7V158 B 1 2 140 1 expression tag GLY 0 4K61 A A7V158 UNP 1 2 expression tag GLY 0 4K61 B A7V158 UNP 1 8 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ALA 43 A ALA 23 A ASP 47 A ASP 27 A TYR 50 A TYR 30 A MSE 57 A MSE 37 A PHE 60 A PHE 40 A PHE 66 A PHE 46 A TRP 72 A TRP 52 A ASP 78 A ASP 58 A MSE 102 A MSE 82 A GLN 110 A GLN 90 A ILE 117 A ILE 97 A GLY 123 A GLY 103 A LYS 130 A LYS 110 A PHE 135 A PHE 115 A ILE 141 A ILE 121 A ASN 146 A ASN 126 B ALA 43 B ALA 23 B ASP 47 B ASP 27 B TYR 50 B TYR 30 B MSE 57 B MSE 37 B PHE 60 B PHE 40 B PHE 66 B PHE 46 B TRP 72 B TRP 52 B ASP 78 B ASP 58 B MSE 102 B MSE 82 B GLN 110 B GLN 90 B ILE 117 B ILE 97 B GLY 123 B GLY 103 B LYS 130 B LYS 110 B PHE 135 B PHE 115 B ILE 141 B ILE 121 B ASN 146 B ASN 126 79 I 4