0.019704
0.000000
0.006220
0.000000
0.012507
0.000000
0.000000
0.000000
0.018956
0.00000
0.00000
0.00000
Freudenthal, B.D.
Beard, W.A.
Shock, D.D.
Wilson, S.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
107.52
90.00
50.750
79.956
55.320
134816
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C9 H16 N3 O13 P3
467.157
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
non-polymer
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
H4 O7 P2
177.975
PYROPHOSPHATE
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
O
N
90
N
P
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
C
N
95
R
C
N
96
N
O
N
97
S
C
N
98
N
O
N
99
N
C
N
100
R
C
Y
101
N
N
Y
102
N
C
Y
103
N
N
Y
104
N
C
Y
105
N
C
N
106
N
N
Y
107
N
N
Y
108
N
C
Y
109
N
N
Y
110
N
C
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
O
N
126
N
P
N
127
N
O
N
128
N
O
N
129
N
O
N
130
N
C
N
131
R
C
N
132
N
O
N
133
S
C
N
134
N
O
N
135
N
C
N
136
R
C
N
137
N
N
N
138
N
C
N
139
N
O
N
140
N
N
N
141
N
C
N
142
N
N
N
143
N
C
N
144
N
C
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
N
C
N
161
N
N
N
162
N
C
N
163
N
C
N
164
N
C
N
165
N
O
N
166
N
N
N
167
R
C
N
168
N
C
N
169
S
C
N
170
R
C
N
171
N
O
N
172
N
O
N
173
N
C
N
174
N
O
N
175
R
P
N
176
N
O
N
177
N
O
N
178
N
O
N
179
S
P
N
180
N
O
N
181
N
O
N
182
N
O
N
183
N
P
N
184
N
O
N
185
N
O
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
O
N
204
N
P
N
205
N
O
N
206
N
O
N
207
N
O
N
208
N
C
N
209
R
C
N
210
N
O
N
211
S
C
N
212
N
O
N
213
N
C
N
214
R
C
Y
215
N
N
Y
216
N
C
Y
217
N
N
Y
218
N
C
N
219
N
C
N
220
N
O
N
221
N
N
N
222
N
C
N
223
N
N
N
224
N
N
Y
225
N
C
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
O
N
241
N
P
N
242
N
O
N
243
N
O
N
244
N
O
N
245
N
C
N
246
R
C
N
247
N
O
N
248
S
C
N
249
N
O
N
250
N
C
N
251
R
C
N
252
N
N
N
253
N
C
N
254
N
O
N
255
N
N
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
C
N
283
N
O
N
284
N
N
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
O
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
N
C
N
317
N
C
N
318
N
O
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
Y
330
N
C
Y
331
N
N
Y
332
N
C
Y
333
N
C
Y
334
N
N
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
S
C
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
N
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
S
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
MG
N
439
N
NA
N
440
N
N
N
441
S
C
N
442
N
C
N
443
N
O
N
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
O
N
464
N
P
N
465
N
O
N
466
N
O
N
467
N
O
N
468
N
P
N
469
N
O
N
470
N
O
N
471
N
O
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
N
N
477
S
C
N
478
N
C
N
479
N
O
N
480
N
C
N
481
N
C
N
482
N
C
N
483
N
O
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
N
N
494
S
C
N
495
N
C
N
496
N
O
N
497
N
C
N
498
N
O
N
499
N
O
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
N
N
508
S
C
N
509
N
C
N
510
N
O
N
511
R
C
N
512
N
O
N
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
N
N
525
S
C
N
526
N
C
N
527
N
O
N
528
N
C
Y
529
N
C
Y
530
N
C
Y
531
N
C
Y
532
N
N
Y
533
N
C
Y
534
N
C
Y
535
N
C
Y
536
N
C
Y
537
N
C
N
538
N
O
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
N
N
552
S
C
N
553
N
C
N
554
N
O
N
555
N
C
Y
556
N
C
Y
557
N
C
Y
558
N
C
Y
559
N
C
Y
560
N
C
Y
561
N
C
N
562
N
O
N
563
N
O
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
574
N
H
N
575
N
N
N
576
S
C
N
577
N
C
N
578
N
O
N
579
N
C
N
580
N
C
N
581
N
C
N
582
N
O
N
583
N
H
N
584
N
H
N
585
N
H
N
586
N
H
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
Y
224
N
sing
Y
225
N
sing
Y
226
N
doub
N
227
N
sing
Y
228
N
sing
N
229
N
sing
Y
230
N
doub
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
Y
334
N
sing
Y
335
N
doub
Y
336
N
doub
N
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
Y
442
N
doub
Y
443
N
sing
Y
444
N
sing
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
doub
N
449
N
sing
Y
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
doub
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
doub
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
doub
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
doub
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
Y
523
N
doub
Y
524
N
sing
Y
525
N
sing
N
526
N
sing
Y
527
N
doub
Y
528
N
sing
Y
529
N
sing
N
530
N
sing
Y
531
N
sing
Y
532
N
doub
N
533
N
sing
Y
534
N
doub
N
535
N
sing
Y
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
doub
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
Y
551
N
doub
Y
552
N
sing
Y
553
N
sing
N
554
N
sing
Y
555
N
doub
N
556
N
sing
Y
557
N
doub
N
558
N
sing
Y
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
doub
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
sing
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
154
157
168
10.1016/j.cell.2013.05.048
23827680
Observing a DNA polymerase choose right from wrong.
2013
10.2210/pdb4klf/pdb
pdb_00004klf
100
1
mirrors
CCD
2012-08-09
RIGAKU SATURN 92
0.25 degrees, 60.0 sec, detector distance 50.00 mm
SINGLE WAVELENGTH
M
x-ray
1
1.54178
1.0
0.053
134816
1.54178
ROTATING ANODE
RIGAKU MICROMAX-007 HF
4869.157
5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'
1
syn
polymer
3350.185
5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'
1
syn
polymer
1536.035
5'-D(P*GP*TP*CP*GP*G)-3'
1
syn
polymer
38241.672
DNA polymerase beta
2.7.7.7, 4.2.99.-
1
man
polymer
24.305
MAGNESIUM ION
2
syn
non-polymer
467.157
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
1
syn
non-polymer
177.975
PYROPHOSPHATE
1
syn
non-polymer
35.453
CHLORIDE ION
2
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
18.015
water
407
nat
water
no
no
(DC)(DC)(DG)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)
CCGACGGCGCATCAGC
T
polydeoxyribonucleotide
no
no
(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(DC)
GCTGATGCGCC
P
polydeoxyribonucleotide
no
no
(DG)(DT)(DC)(DG)(DG)
GTCGG
D
polydeoxyribonucleotide
no
no
MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD
IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF
DYIQWKYREPKDRSE
MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD
IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF
DYIQWKYREPKDRSE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
Polb
9606
Homo sapiens
562
Escherichia coli
Tap56
plasmid
pWL11
1
2.23
44.84
VAPOR DIFFUSION
8.0
50 mM imidazole, 350 mM sodium chloride, 17% PEG3350, pH 8.0, VAPOR DIFFUSION, temperature 291K
291
-2.247
1
19
T
1
D
5
2.663
T_DC1:DG5_D
1
-14.556
0.199
-0.092
-0.159
0.119
1
19
T
2
D
4
-0.425
T_DC2:DG4_D
2
-7.106
0.225
0.162
-0.223
0.446
1
19
T
3
D
3
0.555
T_DG3:DC3_D
3
-15.281
-0.280
0.121
-0.056
7.566
1
20
T
4
D
2
-2.425
T_DA4:DT2_D
4
-7.866
0.183
0.226
-0.094
15.383
1
19
T
5
D
1
-0.222
T_DC5:DG1_D
5
1.901
0.323
-0.449
-0.077
10.749
1
19
T
7
P
10
-0.822
T_DG7:DC10_P
6
3.021
-0.105
0.247
-0.116
21.053
1
19
T
8
P
9
0.954
T_DC8:DG9_P
7
-6.182
0.309
-0.430
-0.168
-0.554
1
19
T
9
P
8
-1.999
T_DG9:DC8_P
8
-0.416
-0.287
-0.344
-0.227
3.366
1
19
T
10
P
7
-0.861
T_DC10:DG7_P
9
-7.387
0.228
-0.125
-0.170
-4.052
1
20
T
11
P
6
4.368
T_DA11:DT6_P
10
-8.821
0.105
0.109
-0.082
3.536
1
20
T
12
P
5
4.158
T_DT12:DA5_P
11
-9.777
0.027
0.006
-0.155
5.135
1
19
T
13
P
4
-2.767
T_DC13:DG4_P
12
-10.056
0.273
-0.411
-0.284
-3.162
1
20
T
14
P
3
-3.171
T_DA14:DT3_P
13
-9.173
0.126
-0.147
-0.197
5.041
1
19
T
15
P
2
-4.792
T_DG15:DC2_P
14
-7.787
-0.148
0.310
-0.316
9.712
1
19
T
16
P
1
-1.192
T_DC16:DG1_P
15
-10.191
0.306
0.042
-0.218
3.435
33.791
T
T
1
2
12.519
D
D
5
4
3.368
7.224
-0.022
0.673
TT_DC1DC2:DG4DG5_DD
1
-0.270
0.468
33.030
-0.071
-0.008
3.473
37.285
T
T
2
3
4.763
D
D
4
3
3.369
3.036
-0.466
1.069
TT_DC2DG3:DC3DG4_DD
2
-4.087
6.412
36.948
1.250
0.160
3.075
35.285
T
T
3
4
-2.673
D
D
3
2
3.072
-1.620
0.066
-0.223
TT_DG3DA4:DT2DC3_DD
3
-1.145
1.891
35.231
-0.142
-0.268
3.280
30.075
T
T
4
5
1.588
D
D
2
1
3.222
0.820
0.706
-0.494
TT_DA4DC5:DG1DT2_DD
4
5.018
-9.716
29.652
-1.121
-0.332
3.160
32.731
T
T
7
8
6.930
P
P
10
9
3.232
3.889
0.521
-0.750
TT_DG7DC8:DG9DC10_PP
5
3.608
-6.429
32.310
-1.992
-0.312
3.687
37.859
T
T
8
9
11.680
P
P
9
8
3.763
7.525
-1.247
-0.446
TT_DC8DG9:DC8DG9_PP
6
-2.816
4.371
37.028
-1.801
1.506
3.238
32.214
T
T
9
10
7.979
P
P
8
7
3.305
4.412
-0.536
-0.475
TT_DG9DC10:DG7DC8_PP
7
-1.946
3.519
31.861
-1.646
0.617
3.235
38.419
T
T
10
11
10.821
P
P
7
6
3.358
7.076
-0.028
-0.342
TT_DC10DA11:DT6DG7_PP
8
-3.151
4.819
37.659
-1.418
-0.358
3.197
30.287
T
T
11
12
-2.549
P
P
6
5
3.168
-1.331
-0.214
-0.664
TT_DA11DT12:DA5DT6_PP
9
-0.639
1.223
30.252
-1.009
0.283
3.059
35.468
T
T
12
13
10.022
P
P
5
4
3.141
6.045
0.165
-0.112
TT_DT12DC13:DG4DA5_PP
10
6.406
-10.619
34.391
-1.037
0.635
3.581
38.274
T
T
13
14
13.021
P
P
4
3
3.533
8.464
-0.418
0.506
TT_DC13DA14:DT3DG4_PP
11
-2.974
4.575
37.246
-0.401
0.226
3.009
32.120
T
T
14
15
7.090
P
P
3
2
3.087
3.904
0.086
-0.179
TT_DA14DG15:DC2DT3_PP
12
-4.103
7.453
31.630
-0.980
-0.846
3.038
35.434
T
T
15
16
11.035
P
P
2
1
3.162
6.675
0.614
-0.553
TT_DG15DC16:DG1DC2_PP
13
2.079
-3.438
34.759
-1.847
-0.717
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2013-07-17
1
1
2017-11-15
1
2
2023-09-20
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2013-05-07
REL
REL
MG
MAGNESIUM ION
DCP
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE
PPV
PYROPHOSPHATE
CL
CHLORIDE ION
NA
SODIUM ION
HOH
water
2FMS
PDB ENTRY 2FMS
PDB
experimental model
MG
1
5
MG
MG
401
A
MG
2
5
MG
MG
402
A
DCP
1
6
DCP
DCP
403
A
PPV
1
7
PPV
PPV
404
A
CL
1
8
CL
CL
405
A
CL
2
8
CL
CL
406
A
NA
1
9
NA
NA
407
A
NA
2
9
NA
NA
408
A
HOH
13
10
HOH
HOH
101
T
HOH
61
10
HOH
HOH
102
T
HOH
64
10
HOH
HOH
103
T
HOH
65
10
HOH
HOH
104
T
HOH
81
10
HOH
HOH
105
T
HOH
82
10
HOH
HOH
106
T
HOH
87
10
HOH
HOH
107
T
HOH
100
10
HOH
HOH
108
T
HOH
102
10
HOH
HOH
109
T
HOH
103
10
HOH
HOH
110
T
HOH
106
10
HOH
HOH
111
T
HOH
108
10
HOH
HOH
112
T
HOH
109
10
HOH
HOH
113
T
HOH
117
10
HOH
HOH
114
T
HOH
120
10
HOH
HOH
115
T
HOH
128
10
HOH
HOH
116
T
HOH
131
10
HOH
HOH
117
T
HOH
139
10
HOH
HOH
118
T
HOH
147
10
HOH
HOH
119
T
HOH
148
10
HOH
HOH
120
T
HOH
158
10
HOH
HOH
121
T
HOH
164
10
HOH
HOH
122
T
HOH
169
10
HOH
HOH
123
T
HOH
171
10
HOH
HOH
124
T
HOH
177
10
HOH
HOH
125
T
HOH
183
10
HOH
HOH
126
T
HOH
186
10
HOH
HOH
127
T
HOH
196
10
HOH
HOH
128
T
HOH
197
10
HOH
HOH
129
T
HOH
203
10
HOH
HOH
130
T
HOH
208
10
HOH
HOH
131
T
HOH
221
10
HOH
HOH
132
T
HOH
228
10
HOH
HOH
133
T
HOH
233
10
HOH
HOH
134
T
HOH
235
10
HOH
HOH
135
T
HOH
237
10
HOH
HOH
136
T
HOH
246
10
HOH
HOH
137
T
HOH
248
10
HOH
HOH
138
T
HOH
250
10
HOH
HOH
139
T
HOH
258
10
HOH
HOH
140
T
HOH
287
10
HOH
HOH
141
T
HOH
291
10
HOH
HOH
142
T
HOH
319
10
HOH
HOH
143
T
HOH
339
10
HOH
HOH
144
T
HOH
346
10
HOH
HOH
145
T
HOH
383
10
HOH
HOH
146
T
HOH
388
10
HOH
HOH
147
T
HOH
395
10
HOH
HOH
148
T
HOH
411
10
HOH
HOH
149
T
HOH
5
10
HOH
HOH
101
P
HOH
57
10
HOH
HOH
102
P
HOH
83
10
HOH
HOH
103
P
HOH
85
10
HOH
HOH
104
P
HOH
94
10
HOH
HOH
105
P
HOH
97
10
HOH
HOH
106
P
HOH
99
10
HOH
HOH
107
P
HOH
152
10
HOH
HOH
108
P
HOH
157
10
HOH
HOH
109
P
HOH
163
10
HOH
HOH
110
P
HOH
166
10
HOH
HOH
111
P
HOH
188
10
HOH
HOH
112
P
HOH
229
10
HOH
HOH
113
P
HOH
247
10
HOH
HOH
114
P
HOH
303
10
HOH
HOH
115
P
HOH
311
10
HOH
HOH
116
P
HOH
348
10
HOH
HOH
117
P
HOH
363
10
HOH
HOH
118
P
HOH
365
10
HOH
HOH
119
P
HOH
369
10
HOH
HOH
120
P
HOH
370
10
HOH
HOH
121
P
HOH
377
10
HOH
HOH
122
P
HOH
386
10
HOH
HOH
123
P
HOH
1
10
HOH
HOH
124
P
HOH
90
10
HOH
HOH
101
D
HOH
119
10
HOH
HOH
102
D
HOH
143
10
HOH
HOH
103
D
HOH
191
10
HOH
HOH
104
D
HOH
230
10
HOH
HOH
105
D
HOH
304
10
HOH
HOH
106
D
HOH
315
10
HOH
HOH
107
D
HOH
318
10
HOH
HOH
108
D
HOH
330
10
HOH
HOH
109
D
HOH
343
10
HOH
HOH
110
D
HOH
373
10
HOH
HOH
111
D
HOH
376
10
HOH
HOH
112
D
HOH
387
10
HOH
HOH
113
D
HOH
4
10
HOH
HOH
501
A
HOH
7
10
HOH
HOH
502
A
HOH
8
10
HOH
HOH
503
A
HOH
9
10
HOH
HOH
504
A
HOH
10
10
HOH
HOH
505
A
HOH
11
10
HOH
HOH
506
A
HOH
12
10
HOH
HOH
507
A
HOH
14
10
HOH
HOH
508
A
HOH
15
10
HOH
HOH
509
A
HOH
16
10
HOH
HOH
510
A
HOH
17
10
HOH
HOH
511
A
HOH
18
10
HOH
HOH
512
A
HOH
19
10
HOH
HOH
513
A
HOH
20
10
HOH
HOH
514
A
HOH
21
10
HOH
HOH
515
A
HOH
22
10
HOH
HOH
516
A
HOH
23
10
HOH
HOH
517
A
HOH
24
10
HOH
HOH
518
A
HOH
25
10
HOH
HOH
519
A
HOH
26
10
HOH
HOH
520
A
HOH
27
10
HOH
HOH
521
A
HOH
28
10
HOH
HOH
522
A
HOH
29
10
HOH
HOH
523
A
HOH
30
10
HOH
HOH
524
A
HOH
31
10
HOH
HOH
525
A
HOH
32
10
HOH
HOH
526
A
HOH
33
10
HOH
HOH
527
A
HOH
34
10
HOH
HOH
528
A
HOH
35
10
HOH
HOH
529
A
HOH
36
10
HOH
HOH
530
A
HOH
37
10
HOH
HOH
531
A
HOH
38
10
HOH
HOH
532
A
HOH
39
10
HOH
HOH
533
A
HOH
40
10
HOH
HOH
534
A
HOH
41
10
HOH
HOH
535
A
HOH
42
10
HOH
HOH
536
A
HOH
43
10
HOH
HOH
537
A
HOH
44
10
HOH
HOH
538
A
HOH
45
10
HOH
HOH
539
A
HOH
46
10
HOH
HOH
540
A
HOH
47
10
HOH
HOH
541
A
HOH
48
10
HOH
HOH
542
A
HOH
49
10
HOH
HOH
543
A
HOH
50
10
HOH
HOH
544
A
HOH
51
10
HOH
HOH
545
A
HOH
52
10
HOH
HOH
546
A
HOH
53
10
HOH
HOH
547
A
HOH
54
10
HOH
HOH
548
A
HOH
55
10
HOH
HOH
549
A
HOH
56
10
HOH
HOH
550
A
HOH
58
10
HOH
HOH
551
A
HOH
59
10
HOH
HOH
552
A
HOH
60
10
HOH
HOH
553
A
HOH
62
10
HOH
HOH
554
A
HOH
63
10
HOH
HOH
555
A
HOH
66
10
HOH
HOH
556
A
HOH
67
10
HOH
HOH
557
A
HOH
68
10
HOH
HOH
558
A
HOH
69
10
HOH
HOH
559
A
HOH
70
10
HOH
HOH
560
A
HOH
71
10
HOH
HOH
561
A
HOH
72
10
HOH
HOH
562
A
HOH
73
10
HOH
HOH
563
A
HOH
74
10
HOH
HOH
564
A
HOH
75
10
HOH
HOH
565
A
HOH
76
10
HOH
HOH
566
A
HOH
77
10
HOH
HOH
567
A
HOH
78
10
HOH
HOH
568
A
HOH
79
10
HOH
HOH
569
A
HOH
80
10
HOH
HOH
570
A
HOH
84
10
HOH
HOH
571
A
HOH
86
10
HOH
HOH
572
A
HOH
88
10
HOH
HOH
573
A
HOH
89
10
HOH
HOH
574
A
HOH
91
10
HOH
HOH
575
A
HOH
92
10
HOH
HOH
576
A
HOH
93
10
HOH
HOH
577
A
HOH
95
10
HOH
HOH
578
A
HOH
96
10
HOH
HOH
579
A
HOH
98
10
HOH
HOH
580
A
HOH
101
10
HOH
HOH
581
A
HOH
104
10
HOH
HOH
582
A
HOH
105
10
HOH
HOH
583
A
HOH
107
10
HOH
HOH
584
A
HOH
110
10
HOH
HOH
585
A
HOH
111
10
HOH
HOH
586
A
HOH
112
10
HOH
HOH
587
A
HOH
113
10
HOH
HOH
588
A
HOH
114
10
HOH
HOH
589
A
HOH
115
10
HOH
HOH
590
A
HOH
116
10
HOH
HOH
591
A
HOH
118
10
HOH
HOH
592
A
HOH
121
10
HOH
HOH
593
A
HOH
122
10
HOH
HOH
594
A
HOH
123
10
HOH
HOH
595
A
HOH
124
10
HOH
HOH
596
A
HOH
125
10
HOH
HOH
597
A
HOH
126
10
HOH
HOH
598
A
HOH
127
10
HOH
HOH
599
A
HOH
129
10
HOH
HOH
600
A
HOH
130
10
HOH
HOH
601
A
HOH
132
10
HOH
HOH
602
A
HOH
133
10
HOH
HOH
603
A
HOH
134
10
HOH
HOH
604
A
HOH
135
10
HOH
HOH
605
A
HOH
136
10
HOH
HOH
606
A
HOH
137
10
HOH
HOH
607
A
HOH
138
10
HOH
HOH
608
A
HOH
140
10
HOH
HOH
609
A
HOH
141
10
HOH
HOH
610
A
HOH
142
10
HOH
HOH
611
A
HOH
144
10
HOH
HOH
612
A
HOH
145
10
HOH
HOH
613
A
HOH
146
10
HOH
HOH
614
A
HOH
149
10
HOH
HOH
615
A
HOH
150
10
HOH
HOH
616
A
HOH
151
10
HOH
HOH
617
A
HOH
153
10
HOH
HOH
618
A
HOH
154
10
HOH
HOH
619
A
HOH
155
10
HOH
HOH
620
A
HOH
156
10
HOH
HOH
621
A
HOH
159
10
HOH
HOH
622
A
HOH
160
10
HOH
HOH
623
A
HOH
161
10
HOH
HOH
624
A
HOH
162
10
HOH
HOH
625
A
HOH
165
10
HOH
HOH
626
A
HOH
167
10
HOH
HOH
627
A
HOH
168
10
HOH
HOH
628
A
HOH
170
10
HOH
HOH
629
A
HOH
172
10
HOH
HOH
630
A
HOH
173
10
HOH
HOH
631
A
HOH
174
10
HOH
HOH
632
A
HOH
175
10
HOH
HOH
633
A
HOH
176
10
HOH
HOH
634
A
HOH
178
10
HOH
HOH
635
A
HOH
179
10
HOH
HOH
636
A
HOH
180
10
HOH
HOH
637
A
HOH
181
10
HOH
HOH
638
A
HOH
182
10
HOH
HOH
639
A
HOH
184
10
HOH
HOH
640
A
HOH
185
10
HOH
HOH
641
A
HOH
187
10
HOH
HOH
642
A
HOH
189
10
HOH
HOH
643
A
HOH
190
10
HOH
HOH
644
A
HOH
192
10
HOH
HOH
645
A
HOH
193
10
HOH
HOH
646
A
HOH
194
10
HOH
HOH
647
A
HOH
195
10
HOH
HOH
648
A
HOH
198
10
HOH
HOH
649
A
HOH
199
10
HOH
HOH
650
A
HOH
200
10
HOH
HOH
651
A
HOH
201
10
HOH
HOH
652
A
HOH
202
10
HOH
HOH
653
A
HOH
204
10
HOH
HOH
654
A
HOH
205
10
HOH
HOH
655
A
HOH
206
10
HOH
HOH
656
A
HOH
207
10
HOH
HOH
657
A
HOH
209
10
HOH
HOH
658
A
HOH
210
10
HOH
HOH
659
A
HOH
211
10
HOH
HOH
660
A
HOH
212
10
HOH
HOH
661
A
HOH
213
10
HOH
HOH
662
A
HOH
214
10
HOH
HOH
663
A
HOH
215
10
HOH
HOH
664
A
HOH
216
10
HOH
HOH
665
A
HOH
217
10
HOH
HOH
666
A
HOH
218
10
HOH
HOH
667
A
HOH
219
10
HOH
HOH
668
A
HOH
220
10
HOH
HOH
669
A
HOH
222
10
HOH
HOH
670
A
HOH
223
10
HOH
HOH
671
A
HOH
224
10
HOH
HOH
672
A
HOH
225
10
HOH
HOH
673
A
HOH
226
10
HOH
HOH
674
A
HOH
227
10
HOH
HOH
675
A
HOH
231
10
HOH
HOH
676
A
HOH
232
10
HOH
HOH
677
A
HOH
234
10
HOH
HOH
678
A
HOH
236
10
HOH
HOH
679
A
HOH
238
10
HOH
HOH
680
A
HOH
239
10
HOH
HOH
681
A
HOH
240
10
HOH
HOH
682
A
HOH
241
10
HOH
HOH
683
A
HOH
242
10
HOH
HOH
684
A
HOH
243
10
HOH
HOH
685
A
HOH
244
10
HOH
HOH
686
A
HOH
245
10
HOH
HOH
687
A
HOH
249
10
HOH
HOH
688
A
HOH
251
10
HOH
HOH
689
A
HOH
252
10
HOH
HOH
690
A
HOH
253
10
HOH
HOH
691
A
HOH
254
10
HOH
HOH
692
A
HOH
255
10
HOH
HOH
693
A
HOH
256
10
HOH
HOH
694
A
HOH
257
10
HOH
HOH
695
A
HOH
259
10
HOH
HOH
696
A
HOH
260
10
HOH
HOH
697
A
HOH
261
10
HOH
HOH
698
A
HOH
262
10
HOH
HOH
699
A
HOH
263
10
HOH
HOH
700
A
HOH
264
10
HOH
HOH
701
A
HOH
265
10
HOH
HOH
702
A
HOH
266
10
HOH
HOH
703
A
HOH
267
10
HOH
HOH
704
A
HOH
268
10
HOH
HOH
705
A
HOH
269
10
HOH
HOH
706
A
HOH
270
10
HOH
HOH
707
A
HOH
271
10
HOH
HOH
708
A
HOH
272
10
HOH
HOH
709
A
HOH
273
10
HOH
HOH
710
A
HOH
274
10
HOH
HOH
711
A
HOH
275
10
HOH
HOH
712
A
HOH
276
10
HOH
HOH
713
A
HOH
277
10
HOH
HOH
714
A
HOH
278
10
HOH
HOH
715
A
HOH
279
10
HOH
HOH
716
A
HOH
280
10
HOH
HOH
717
A
HOH
281
10
HOH
HOH
718
A
HOH
282
10
HOH
HOH
719
A
HOH
283
10
HOH
HOH
720
A
HOH
284
10
HOH
HOH
721
A
HOH
285
10
HOH
HOH
722
A
HOH
286
10
HOH
HOH
723
A
HOH
288
10
HOH
HOH
724
A
HOH
289
10
HOH
HOH
725
A
HOH
290
10
HOH
HOH
726
A
HOH
292
10
HOH
HOH
727
A
HOH
293
10
HOH
HOH
728
A
HOH
294
10
HOH
HOH
729
A
HOH
295
10
HOH
HOH
730
A
HOH
296
10
HOH
HOH
731
A
HOH
297
10
HOH
HOH
732
A
HOH
298
10
HOH
HOH
733
A
HOH
299
10
HOH
HOH
734
A
HOH
300
10
HOH
HOH
735
A
HOH
301
10
HOH
HOH
736
A
HOH
302
10
HOH
HOH
737
A
HOH
305
10
HOH
HOH
738
A
HOH
306
10
HOH
HOH
739
A
HOH
307
10
HOH
HOH
740
A
HOH
308
10
HOH
HOH
741
A
HOH
309
10
HOH
HOH
742
A
HOH
310
10
HOH
HOH
743
A
HOH
312
10
HOH
HOH
744
A
HOH
313
10
HOH
HOH
745
A
HOH
314
10
HOH
HOH
746
A
HOH
316
10
HOH
HOH
747
A
HOH
317
10
HOH
HOH
748
A
HOH
320
10
HOH
HOH
749
A
HOH
321
10
HOH
HOH
750
A
HOH
322
10
HOH
HOH
751
A
HOH
323
10
HOH
HOH
752
A
HOH
324
10
HOH
HOH
753
A
HOH
325
10
HOH
HOH
754
A
HOH
326
10
HOH
HOH
755
A
HOH
327
10
HOH
HOH
756
A
HOH
328
10
HOH
HOH
757
A
HOH
329
10
HOH
HOH
758
A
HOH
331
10
HOH
HOH
759
A
HOH
332
10
HOH
HOH
760
A
HOH
333
10
HOH
HOH
761
A
HOH
334
10
HOH
HOH
762
A
HOH
335
10
HOH
HOH
763
A
HOH
336
10
HOH
HOH
764
A
HOH
337
10
HOH
HOH
765
A
HOH
338
10
HOH
HOH
766
A
HOH
340
10
HOH
HOH
767
A
HOH
341
10
HOH
HOH
768
A
HOH
342
10
HOH
HOH
769
A
HOH
344
10
HOH
HOH
770
A
HOH
345
10
HOH
HOH
771
A
HOH
347
10
HOH
HOH
772
A
HOH
349
10
HOH
HOH
773
A
HOH
350
10
HOH
HOH
774
A
HOH
351
10
HOH
HOH
775
A
HOH
352
10
HOH
HOH
776
A
HOH
353
10
HOH
HOH
777
A
HOH
354
10
HOH
HOH
778
A
HOH
355
10
HOH
HOH
779
A
HOH
356
10
HOH
HOH
780
A
HOH
357
10
HOH
HOH
781
A
HOH
358
10
HOH
HOH
782
A
HOH
359
10
HOH
HOH
783
A
HOH
360
10
HOH
HOH
784
A
HOH
361
10
HOH
HOH
785
A
HOH
362
10
HOH
HOH
786
A
HOH
364
10
HOH
HOH
787
A
HOH
366
10
HOH
HOH
788
A
HOH
367
10
HOH
HOH
789
A
HOH
368
10
HOH
HOH
790
A
HOH
371
10
HOH
HOH
791
A
HOH
372
10
HOH
HOH
792
A
HOH
374
10
HOH
HOH
793
A
HOH
375
10
HOH
HOH
794
A
HOH
378
10
HOH
HOH
795
A
HOH
379
10
HOH
HOH
796
A
HOH
380
10
HOH
HOH
797
A
HOH
381
10
HOH
HOH
798
A
HOH
382
10
HOH
HOH
799
A
HOH
384
10
HOH
HOH
800
A
HOH
385
10
HOH
HOH
801
A
HOH
390
10
HOH
HOH
802
A
HOH
391
10
HOH
HOH
803
A
HOH
392
10
HOH
HOH
804
A
HOH
393
10
HOH
HOH
805
A
HOH
394
10
HOH
HOH
806
A
HOH
396
10
HOH
HOH
807
A
HOH
397
10
HOH
HOH
808
A
HOH
398
10
HOH
HOH
809
A
HOH
399
10
HOH
HOH
810
A
HOH
400
10
HOH
HOH
811
A
HOH
401
10
HOH
HOH
812
A
HOH
402
10
HOH
HOH
813
A
HOH
403
10
HOH
HOH
814
A
HOH
404
10
HOH
HOH
815
A
HOH
405
10
HOH
HOH
816
A
HOH
406
10
HOH
HOH
817
A
HOH
407
10
HOH
HOH
818
A
HOH
408
10
HOH
HOH
819
A
HOH
409
10
HOH
HOH
820
A
HOH
410
10
HOH
HOH
821
A
DC
1
n
1
DC
1
T
DC
2
n
2
DC
2
T
DG
3
n
3
DG
3
T
DA
4
n
4
DA
4
T
DC
5
n
5
DC
5
T
DG
6
n
6
DG
6
T
DG
7
n
7
DG
7
T
DC
8
n
8
DC
8
T
DG
9
n
9
DG
9
T
DC
10
n
10
DC
10
T
DA
11
n
11
DA
11
T
DT
12
n
12
DT
12
T
DC
13
n
13
DC
13
T
DA
14
n
14
DA
14
T
DG
15
n
15
DG
15
T
DC
16
n
16
DC
16
T
DG
1
n
1
DG
1
P
DC
2
n
2
DC
2
P
DT
3
n
3
DT
3
P
DG
4
n
4
DG
4
P
DA
5
n
5
DA
5
P
DT
6
n
6
DT
6
P
DG
7
n
7
DG
7
P
DC
8
n
8
DC
8
P
DG
9
n
9
DG
9
P
DC
10
n
10
DC
10
P
DC
11
n
11
DC
11
P
DG
1
n
1
DG
1
D
DT
2
n
2
DT
2
D
DC
3
n
3
DC
3
D
DG
4
n
4
DG
4
D
DG
5
n
5
DG
5
D
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
THR
10
n
10
THR
10
A
LEU
11
n
11
LEU
11
A
ASN
12
n
12
ASN
12
A
GLY
13
n
13
GLY
13
A
GLY
14
n
14
GLY
14
A
ILE
15
n
15
ILE
15
A
THR
16
n
16
THR
16
A
ASP
17
n
17
ASP
17
A
MET
18
n
18
MET
18
A
LEU
19
n
19
LEU
19
A
THR
20
n
20
THR
20
A
GLU
21
n
21
GLU
21
A
LEU
22
n
22
LEU
22
A
ALA
23
n
23
ALA
23
A
ASN
24
n
24
ASN
24
A
PHE
25
n
25
PHE
25
A
GLU
26
n
26
GLU
26
A
LYS
27
n
27
LYS
27
A
ASN
28
n
28
ASN
28
A
VAL
29
n
29
VAL
29
A
SER
30
n
30
SER
30
A
GLN
31
n
31
GLN
31
A
ALA
32
n
32
ALA
32
A
ILE
33
n
33
ILE
33
A
HIS
34
n
34
HIS
34
A
LYS
35
n
35
LYS
35
A
TYR
36
n
36
TYR
36
A
ASN
37
n
37
ASN
37
A
ALA
38
n
38
ALA
38
A
TYR
39
n
39
TYR
39
A
ARG
40
n
40
ARG
40
A
LYS
41
n
41
LYS
41
A
ALA
42
n
42
ALA
42
A
ALA
43
n
43
ALA
43
A
SER
44
n
44
SER
44
A
VAL
45
n
45
VAL
45
A
ILE
46
n
46
ILE
46
A
ALA
47
n
47
ALA
47
A
LYS
48
n
48
LYS
48
A
TYR
49
n
49
TYR
49
A
PRO
50
n
50
PRO
50
A
HIS
51
n
51
HIS
51
A
LYS
52
n
52
LYS
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
SER
55
n
55
SER
55
A
GLY
56
n
56
GLY
56
A
ALA
57
n
57
ALA
57
A
GLU
58
n
58
GLU
58
A
ALA
59
n
59
ALA
59
A
LYS
60
n
60
LYS
60
A
LYS
61
n
61
LYS
61
A
LEU
62
n
62
LEU
62
A
PRO
63
n
63
PRO
63
A
GLY
64
n
64
GLY
64
A
VAL
65
n
65
VAL
65
A
GLY
66
n
66
GLY
66
A
THR
67
n
67
THR
67
A
LYS
68
n
68
LYS
68
A
ILE
69
n
69
ILE
69
A
ALA
70
n
70
ALA
70
A
GLU
71
n
71
GLU
71
A
LYS
72
n
72
LYS
72
A
ILE
73
n
73
ILE
73
A
ASP
74
n
74
ASP
74
A
GLU
75
n
75
GLU
75
A
PHE
76
n
76
PHE
76
A
LEU
77
n
77
LEU
77
A
ALA
78
n
78
ALA
78
A
THR
79
n
79
THR
79
A
GLY
80
n
80
GLY
80
A
LYS
81
n
81
LYS
81
A
LEU
82
n
82
LEU
82
A
ARG
83
n
83
ARG
83
A
LYS
84
n
84
LYS
84
A
LEU
85
n
85
LEU
85
A
GLU
86
n
86
GLU
86
A
LYS
87
n
87
LYS
87
A
ILE
88
n
88
ILE
88
A
ARG
89
n
89
ARG
89
A
GLN
90
n
90
GLN
90
A
ASP
91
n
91
ASP
91
A
ASP
92
n
92
ASP
92
A
THR
93
n
93
THR
93
A
SER
94
n
94
SER
94
A
SER
95
n
95
SER
95
A
SER
96
n
96
SER
96
A
ILE
97
n
97
ILE
97
A
ASN
98
n
98
ASN
98
A
PHE
99
n
99
PHE
99
A
LEU
100
n
100
LEU
100
A
THR
101
n
101
THR
101
A
ARG
102
n
102
ARG
102
A
VAL
103
n
103
VAL
103
A
SER
104
n
104
SER
104
A
GLY
105
n
105
GLY
105
A
ILE
106
n
106
ILE
106
A
GLY
107
n
107
GLY
107
A
PRO
108
n
108
PRO
108
A
SER
109
n
109
SER
109
A
ALA
110
n
110
ALA
110
A
ALA
111
n
111
ALA
111
A
ARG
112
n
112
ARG
112
A
LYS
113
n
113
LYS
113
A
PHE
114
n
114
PHE
114
A
VAL
115
n
115
VAL
115
A
ASP
116
n
116
ASP
116
A
GLU
117
n
117
GLU
117
A
GLY
118
n
118
GLY
118
A
ILE
119
n
119
ILE
119
A
LYS
120
n
120
LYS
120
A
THR
121
n
121
THR
121
A
LEU
122
n
122
LEU
122
A
GLU
123
n
123
GLU
123
A
ASP
124
n
124
ASP
124
A
LEU
125
n
125
LEU
125
A
ARG
126
n
126
ARG
126
A
LYS
127
n
127
LYS
127
A
ASN
128
n
128
ASN
128
A
GLU
129
n
129
GLU
129
A
ASP
130
n
130
ASP
130
A
LYS
131
n
131
LYS
131
A
LEU
132
n
132
LEU
132
A
ASN
133
n
133
ASN
133
A
HIS
134
n
134
HIS
134
A
HIS
135
n
135
HIS
135
A
GLN
136
n
136
GLN
136
A
ARG
137
n
137
ARG
137
A
ILE
138
n
138
ILE
138
A
GLY
139
n
139
GLY
139
A
LEU
140
n
140
LEU
140
A
LYS
141
n
141
LYS
141
A
TYR
142
n
142
TYR
142
A
PHE
143
n
143
PHE
143
A
GLY
144
n
144
GLY
144
A
ASP
145
n
145
ASP
145
A
PHE
146
n
146
PHE
146
A
GLU
147
n
147
GLU
147
A
LYS
148
n
148
LYS
148
A
ARG
149
n
149
ARG
149
A
ILE
150
n
150
ILE
150
A
PRO
151
n
151
PRO
151
A
ARG
152
n
152
ARG
152
A
GLU
153
n
153
GLU
153
A
GLU
154
n
154
GLU
154
A
MET
155
n
155
MET
155
A
LEU
156
n
156
LEU
156
A
GLN
157
n
157
GLN
157
A
MET
158
n
158
MET
158
A
GLN
159
n
159
GLN
159
A
ASP
160
n
160
ASP
160
A
ILE
161
n
161
ILE
161
A
VAL
162
n
162
VAL
162
A
LEU
163
n
163
LEU
163
A
ASN
164
n
164
ASN
164
A
GLU
165
n
165
GLU
165
A
VAL
166
n
166
VAL
166
A
LYS
167
n
167
LYS
167
A
LYS
168
n
168
LYS
168
A
VAL
169
n
169
VAL
169
A
ASP
170
n
170
ASP
170
A
SER
171
n
171
SER
171
A
GLU
172
n
172
GLU
172
A
TYR
173
n
173
TYR
173
A
ILE
174
n
174
ILE
174
A
ALA
175
n
175
ALA
175
A
THR
176
n
176
THR
176
A
VAL
177
n
177
VAL
177
A
CYS
178
n
178
CYS
178
A
GLY
179
n
179
GLY
179
A
SER
180
n
180
SER
180
A
PHE
181
n
181
PHE
181
A
ARG
182
n
182
ARG
182
A
ARG
183
n
183
ARG
183
A
GLY
184
n
184
GLY
184
A
ALA
185
n
185
ALA
185
A
GLU
186
n
186
GLU
186
A
SER
187
n
187
SER
187
A
SER
188
n
188
SER
188
A
GLY
189
n
189
GLY
189
A
ASP
190
n
190
ASP
190
A
MET
191
n
191
MET
191
A
ASP
192
n
192
ASP
192
A
VAL
193
n
193
VAL
193
A
LEU
194
n
194
LEU
194
A
LEU
195
n
195
LEU
195
A
THR
196
n
196
THR
196
A
HIS
197
n
197
HIS
197
A
PRO
198
n
198
PRO
198
A
SER
199
n
199
SER
199
A
PHE
200
n
200
PHE
200
A
THR
201
n
201
THR
201
A
SER
202
n
202
SER
202
A
GLU
203
n
203
GLU
203
A
SER
204
n
204
SER
204
A
THR
205
n
205
THR
205
A
LYS
206
n
206
LYS
206
A
GLN
207
n
207
GLN
207
A
PRO
208
n
208
PRO
208
A
LYS
209
n
209
LYS
209
A
LEU
210
n
210
LEU
210
A
LEU
211
n
211
LEU
211
A
HIS
212
n
212
HIS
212
A
GLN
213
n
213
GLN
213
A
VAL
214
n
214
VAL
214
A
VAL
215
n
215
VAL
215
A
GLU
216
n
216
GLU
216
A
GLN
217
n
217
GLN
217
A
LEU
218
n
218
LEU
218
A
GLN
219
n
219
GLN
219
A
LYS
220
n
220
LYS
220
A
VAL
221
n
221
VAL
221
A
HIS
222
n
222
HIS
222
A
PHE
223
n
223
PHE
223
A
ILE
224
n
224
ILE
224
A
THR
225
n
225
THR
225
A
ASP
226
n
226
ASP
226
A
THR
227
n
227
THR
227
A
LEU
228
n
228
LEU
228
A
SER
229
n
229
SER
229
A
LYS
230
n
230
LYS
230
A
GLY
231
n
231
GLY
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
LYS
234
n
234
LYS
234
A
PHE
235
n
235
PHE
235
A
MET
236
n
236
MET
236
A
GLY
237
n
237
GLY
237
A
VAL
238
n
238
VAL
238
A
CYS
239
n
239
CYS
239
A
GLN
240
n
240
GLN
240
A
LEU
241
n
241
LEU
241
A
PRO
242
n
242
PRO
242
A
SER
243
n
243
SER
243
A
LYS
244
n
244
LYS
244
A
ASN
245
n
245
ASN
245
A
ASP
246
n
246
ASP
246
A
GLU
247
n
247
GLU
247
A
LYS
248
n
248
LYS
248
A
GLU
249
n
249
GLU
249
A
TYR
250
n
250
TYR
250
A
PRO
251
n
251
PRO
251
A
HIS
252
n
252
HIS
252
A
ARG
253
n
253
ARG
253
A
ARG
254
n
254
ARG
254
A
ILE
255
n
255
ILE
255
A
ASP
256
n
256
ASP
256
A
ILE
257
n
257
ILE
257
A
ARG
258
n
258
ARG
258
A
LEU
259
n
259
LEU
259
A
ILE
260
n
260
ILE
260
A
PRO
261
n
261
PRO
261
A
LYS
262
n
262
LYS
262
A
ASP
263
n
263
ASP
263
A
GLN
264
n
264
GLN
264
A
TYR
265
n
265
TYR
265
A
TYR
266
n
266
TYR
266
A
CYS
267
n
267
CYS
267
A
GLY
268
n
268
GLY
268
A
VAL
269
n
269
VAL
269
A
LEU
270
n
270
LEU
270
A
TYR
271
n
271
TYR
271
A
PHE
272
n
272
PHE
272
A
THR
273
n
273
THR
273
A
GLY
274
n
274
GLY
274
A
SER
275
n
275
SER
275
A
ASP
276
n
276
ASP
276
A
ILE
277
n
277
ILE
277
A
PHE
278
n
278
PHE
278
A
ASN
279
n
279
ASN
279
A
LYS
280
n
280
LYS
280
A
ASN
281
n
281
ASN
281
A
MET
282
n
282
MET
282
A
ARG
283
n
283
ARG
283
A
ALA
284
n
284
ALA
284
A
HIS
285
n
285
HIS
285
A
ALA
286
n
286
ALA
286
A
LEU
287
n
287
LEU
287
A
GLU
288
n
288
GLU
288
A
LYS
289
n
289
LYS
289
A
GLY
290
n
290
GLY
290
A
PHE
291
n
291
PHE
291
A
THR
292
n
292
THR
292
A
ILE
293
n
293
ILE
293
A
ASN
294
n
294
ASN
294
A
GLU
295
n
295
GLU
295
A
TYR
296
n
296
TYR
296
A
THR
297
n
297
THR
297
A
ILE
298
n
298
ILE
298
A
ARG
299
n
299
ARG
299
A
PRO
300
n
300
PRO
300
A
LEU
301
n
301
LEU
301
A
GLY
302
n
302
GLY
302
A
VAL
303
n
303
VAL
303
A
THR
304
n
304
THR
304
A
GLY
305
n
305
GLY
305
A
VAL
306
n
306
VAL
306
A
ALA
307
n
307
ALA
307
A
GLY
308
n
308
GLY
308
A
GLU
309
n
309
GLU
309
A
PRO
310
n
310
PRO
310
A
LEU
311
n
311
LEU
311
A
PRO
312
n
312
PRO
312
A
VAL
313
n
313
VAL
313
A
ASP
314
n
314
ASP
314
A
SER
315
n
315
SER
315
A
GLU
316
n
316
GLU
316
A
LYS
317
n
317
LYS
317
A
ASP
318
n
318
ASP
318
A
ILE
319
n
319
ILE
319
A
PHE
320
n
320
PHE
320
A
ASP
321
n
321
ASP
321
A
TYR
322
n
322
TYR
322
A
ILE
323
n
323
ILE
323
A
GLN
324
n
324
GLN
324
A
TRP
325
n
325
TRP
325
A
LYS
326
n
326
LYS
326
A
TYR
327
n
327
TYR
327
A
ARG
328
n
328
ARG
328
A
GLU
329
n
329
GLU
329
A
PRO
330
n
330
PRO
330
A
LYS
331
n
331
LYS
331
A
ASP
332
n
332
ASP
332
A
ARG
333
n
333
ARG
333
A
SER
334
n
334
SER
334
A
GLU
335
n
335
GLU
335
A
author_and_software_defined_assembly
PISA
4
tetrameric
6630
-104
19860
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
P
HOH
107
N
O
HOH
1_555
88.4
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
P
HOH
124
N
O
HOH
1_555
85.1
P
HOH
107
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
P
HOH
124
N
O
HOH
1_555
92.4
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
A
THR
101
D
O
THR
101
1_555
167.6
P
HOH
107
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
THR
101
D
O
THR
101
1_555
81.0
P
HOH
124
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
THR
101
D
O
THR
101
1_555
88.9
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
A
VAL
103
D
O
VAL
103
1_555
94.7
P
HOH
107
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
VAL
103
D
O
VAL
103
1_555
174.8
P
HOH
124
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
VAL
103
D
O
VAL
103
1_555
92.0
A
THR
101
D
O
THR
101
1_555
A
NA
407
K
NA
NA
1_555
A
VAL
103
D
O
VAL
103
1_555
96.3
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
A
ILE
106
D
O
ILE
106
1_555
95.4
P
HOH
107
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
ILE
106
D
O
ILE
106
1_555
92.1
P
HOH
124
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
A
ILE
106
D
O
ILE
106
1_555
175.5
A
THR
101
D
O
THR
101
1_555
A
NA
407
K
NA
NA
1_555
A
ILE
106
D
O
ILE
106
1_555
91.4
A
VAL
103
D
O
VAL
103
1_555
A
NA
407
K
NA
NA
1_555
A
ILE
106
D
O
ILE
106
1_555
83.6
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
P
DC
10
B
B
O3'
DC
10
1_555
18.1
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
P
DC
11
B
B
OP1
DC
11
1_555
78.4
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
P
DC
11
B
B
OP1
DC
11
1_555
65.0
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD2
ASP
190
1_555
150.7
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD2
ASP
190
1_555
138.9
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD2
ASP
190
1_555
105.3
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD1
ASP
190
1_555
150.5
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD1
ASP
190
1_555
139.5
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD1
ASP
190
1_555
74.6
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
190
D
OD1
ASP
190
1_555
51.6
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
192
D
OD1
ASP
192
1_555
83.9
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
192
D
OD1
ASP
192
1_555
95.1
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
192
D
OD1
ASP
192
1_555
86.8
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
192
D
OD1
ASP
192
1_555
125.1
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
192
D
OD1
ASP
192
1_555
83.0
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
74.9
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
87.8
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
152.8
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
95.4
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
132.7
A
ASP
192
D
OD1
ASP
192
1_555
A
MG
402
F
MG
MG
1_555
A
ASP
256
D
OD2
ASP
256
1_555
95.7
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
86.5
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
73.7
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
8.9
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
100.1
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
65.9
A
ASP
192
D
OD1
ASP
192
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
83.9
A
ASP
256
D
OD2
ASP
256
1_555
A
MG
402
F
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
161.3
P
DC
10
A
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
86.4
P
DC
10
B
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
71.4
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
73.2
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
67.7
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
96.9
A
ASP
192
D
OD1
ASP
192
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
159.2
A
ASP
256
D
OD2
ASP
256
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
99.5
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
77.2
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
ASP
190
D
OD1
ASP
190
1_555
79.4
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
ASP
192
D
OD2
ASP
192
1_555
85.9
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
ASP
192
D
OD2
ASP
192
1_555
95.0
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
9.3
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
86.7
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2A
DCP
1_555
91.0
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2G
DCP
1_555
90.9
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2G
DCP
1_555
95.3
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2G
DCP
1_555
168.5
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2G
DCP
1_555
84.4
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2B
DCP
1_555
89.9
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2B
DCP
1_555
169.0
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2B
DCP
1_555
86.7
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2B
DCP
1_555
82.3
A
DCP
403
A
G
O2G
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
DCP
403
A
G
O2B
DCP
1_555
82.2
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
103.8
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
172.6
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
91.9
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
95.8
A
DCP
403
A
G
O2G
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
78.1
A
DCP
403
A
G
O2B
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O32
PPV
1_555
14.5
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
102.6
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
101.0
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
163.0
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
95.7
A
DCP
403
A
G
O2G
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
12.3
A
DCP
403
A
G
O2B
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
78.7
A
PPV
404
B
H
O32
PPV
1_555
A
MG
401
E
MG
MG
1_555
A
PPV
404
B
H
O11
PPV
1_555
71.9
P
DC
11
B
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
175.0
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
103.5
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
89.7
A
DCP
403
A
G
O2A
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
169.7
A
DCP
403
A
G
O2G
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
92.9
A
DCP
403
A
G
O2B
DCP
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
87.4
A
PPV
404
B
H
O32
PPV
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
73.9
A
PPV
404
B
H
O11
PPV
1_555
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
80.9
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
D
HOH
101
O
O
HOH
1_555
78.1
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
A
LYS
60
D
O
LYS
60
1_555
164.1
D
HOH
101
O
O
HOH
1_555
A
NA
408
L
NA
NA
1_555
A
LYS
60
D
O
LYS
60
1_555
86.0
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
A
LEU
62
D
O
LEU
62
1_555
95.4
D
HOH
101
O
O
HOH
1_555
A
NA
408
L
NA
NA
1_555
A
LEU
62
D
O
LEU
62
1_555
171.8
A
LYS
60
D
O
LYS
60
1_555
A
NA
408
L
NA
NA
1_555
A
LEU
62
D
O
LEU
62
1_555
100.5
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
A
VAL
65
D
O
VAL
65
1_555
86.4
D
HOH
101
O
O
HOH
1_555
A
NA
408
L
NA
NA
1_555
A
VAL
65
D
O
VAL
65
1_555
88.6
A
LYS
60
D
O
LYS
60
1_555
A
NA
408
L
NA
NA
1_555
A
VAL
65
D
O
VAL
65
1_555
92.0
A
LEU
62
D
O
LEU
62
1_555
A
NA
408
L
NA
NA
1_555
A
VAL
65
D
O
VAL
65
1_555
96.0
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
87.8
D
HOH
101
O
O
HOH
1_555
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
94.7
A
LYS
60
D
O
LYS
60
1_555
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
94.9
A
LEU
62
D
O
LEU
62
1_555
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
80.0
A
VAL
65
D
O
VAL
65
1_555
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
172.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
150
D
N
ILE
150
A
O
SER
188
D
O
SER
188
A
N
THR
176
D
N
THR
176
A
O
LEU
194
D
O
LEU
194
A
N
LEU
195
D
N
LEU
195
A
O
ARG
258
D
O
ARG
258
A
O
ARG
253
D
O
ARG
253
A
N
CYS
239
D
N
CYS
239
A
O
MET
236
D
O
MET
236
A
N
LEU
228
D
N
LEU
228
A
N
THR
292
D
N
THR
292
A
O
ARG
299
D
O
ARG
299
1
A
CG1
VAL
303
D
CG1
VAL
303
1
Y
1
A
CG2
VAL
303
D
CG2
VAL
303
1
Y
1
A
MET
1
D
MET
1
1
Y
1
A
SER
2
D
SER
2
1
Y
1
A
LYS
3
D
LYS
3
1
Y
1
A
ARG
4
D
ARG
4
1
Y
1
A
LYS
5
D
LYS
5
1
Y
1
A
ALA
6
D
ALA
6
1
Y
1
A
PRO
7
D
PRO
7
1
Y
1
A
GLN
8
D
GLN
8
1
Y
1
A
GLU
9
D
GLU
9
1
Y
1
2.31
0.30
108.30
110.61
P
P
P
O4'
C1'
N1
DC
DC
DC
11
11
11
B
B
B
N
1
A
CYS
178
-117.32
-152.26
1
A
ASP
246
68.41
-0.90
71.560
29.1664
12.420
1.1109
-0.0000
1.5379
0.3114
0.0000
-1.4223
0.2312
0.1790
0.1842
1.850
24.198
3285
33042
9.94
91.78
1.000
0.290
0.8340
0.3000
RANDOM
1
0.0
MOLECULAR REPLACEMENT
23.9900
0.9000
1.1100
PDB ENTRY 2FMS
ML
FLAT BULK SOLVENT MODEL
42.5980
0.3650
1.850
24.198
407
3713
43
651
2612
0.017
3494
1.124
4895
0.062
525
0.005
514
18.907
1373
0.3389
0.2601
1.8774
93
960
1053
23
69.0
0.3387
0.2353
1.9067
117
1086
1203
23
75.0
0.2939
0.2173
1.9380
116
1074
1190
23
78.0
0.3030
0.2133
1.9714
142
1171
1313
23
84.0
0.2829
0.1883
2.0072
132
1224
1356
23
88.0
0.2855
0.2019
2.0458
130
1287
1417
23
90.0
0.2553
0.1899
2.0875
145
1263
1408
23
91.0
0.2456
0.1837
2.1329
159
1321
1480
23
94.0
0.2428
0.1911
2.1825
145
1305
1450
23
95.0
0.2761
0.1894
2.2370
159
1355
1514
23
96.0
0.2472
0.1821
2.2974
151
1335
1486
23
94.0
0.2275
0.1840
2.3650
154
1312
1466
23
95.0
0.2628
0.1879
2.4413
159
1330
1489
23
95.0
0.2298
0.1955
2.5284
144
1338
1482
23
94.0
0.2698
0.2061
2.6295
144
1355
1499
23
96.0
0.2595
0.1993
2.7491
145
1358
1503
23
96.0
0.2379
0.1926
2.8938
159
1335
1494
23
96.0
0.2571
0.1983
3.0747
147
1390
1537
23
97.0
0.2132
0.1876
3.3116
162
1373
1535
23
98.0
0.2357
0.1793
3.6438
137
1416
1553
23
99.0
0.1997
0.1417
4.1688
139
1368
1507
23
96.0
0.1698
0.1374
5.2434
148
1358
1506
23
95.0
0.2006
0.1733
24.2000
158
1443
1601
23
100.0
1.850
50.0
4KLF
36019
35045
0
-3
0.053
0.053
1.012
1
25.2
3.8
97.3
0.318
1.85
1.92
2.778
0.318
1
1.8
87.9
0.215
1.92
1.99
4.82
1
2.3
93.7
0.175
1.99
2.08
5.21
1
2.7
96.9
0.146
2.08
2.19
7.12
1
3.1
99.2
0.130
2.19
2.33
8.72
1
3.6
99.9
0.113
2.33
2.51
10.8
1
4.0
100
data reduction
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
DENZO
package
data scaling
Zbyszek Otwinowski
hkl@hkl-xray.com
http://www.hkl-xray.com/
SCALEPACK
package
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.7_650
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data collection
StructureStudio
DNA polymerase beta matched reactant complex with Mg2+, 20 s
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
6
N
N
7
N
N
8
N
N
8
N
N
9
N
N
9
N
N
10
N
N
10
N
N
10
N
N
10
N
N
A
ASN
12
D
ASN
12
HELX_P
A
VAL
29
D
VAL
29
1
1
18
A
ALA
32
D
ALA
32
HELX_P
A
TYR
49
D
TYR
49
1
2
18
A
SER
55
D
SER
55
HELX_P
A
LYS
61
D
LYS
61
1
3
7
A
GLY
66
D
GLY
66
HELX_P
A
GLY
80
D
GLY
80
1
4
15
A
LEU
82
D
LEU
82
HELX_P
A
ASP
91
D
ASP
91
1
5
10
A
ASP
91
D
ASP
91
HELX_P
A
THR
101
D
THR
101
1
6
11
A
GLY
107
D
GLY
107
HELX_P
A
GLU
117
D
GLU
117
1
7
11
A
THR
121
D
THR
121
HELX_P
A
ASN
128
D
ASN
128
1
8
8
A
GLU
129
D
GLU
129
HELX_P
A
LEU
132
D
LEU
132
5
9
4
A
ASN
133
D
ASN
133
HELX_P
A
TYR
142
D
TYR
142
1
10
10
A
TYR
142
D
TYR
142
HELX_P
A
LYS
148
D
LYS
148
1
11
7
A
ARG
152
D
ARG
152
HELX_P
A
ASP
170
D
ASP
170
1
12
19
A
GLY
179
D
GLY
179
HELX_P
A
ARG
182
D
ARG
182
5
13
4
A
LYS
209
D
LYS
209
HELX_P
A
VAL
221
D
VAL
221
1
14
13
A
PRO
261
D
PRO
261
HELX_P
A
ASP
263
D
ASP
263
5
15
3
A
GLN
264
D
GLN
264
HELX_P
A
GLY
274
D
GLY
274
1
16
11
A
SER
275
D
SER
275
HELX_P
A
GLY
290
D
GLY
290
1
17
16
A
SER
315
D
SER
315
HELX_P
A
ILE
323
D
ILE
323
1
18
9
A
GLU
329
D
GLU
329
HELX_P
A
ARG
333
D
ARG
333
5
19
5
metalc
2.484
P
DG
9
B
OP1
DG
9
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.394
A
P
DC
10
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.507
B
P
DC
10
B
O3'
DC
10
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.465
B
P
DC
11
B
OP1
DC
11
1_555
A
MG
401
E
MG
MG
1_555
metalc
2.169
B
P
DC
11
B
OP1
DC
11
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.365
P
HOH
107
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.626
P
HOH
124
N
O
HOH
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.654
D
DC
3
C
OP1
DC
3
1_555
A
NA
408
L
NA
NA
1_555
metalc
2.678
D
HOH
101
O
O
HOH
1_555
A
NA
408
L
NA
NA
1_555
metalc
2.447
A
LYS
60
D
O
LYS
60
1_555
A
NA
408
L
NA
NA
1_555
metalc
2.274
A
LEU
62
D
O
LEU
62
1_555
A
NA
408
L
NA
NA
1_555
metalc
2.350
A
VAL
65
D
O
VAL
65
1_555
A
NA
408
L
NA
NA
1_555
metalc
2.371
A
THR
101
D
O
THR
101
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.511
A
VAL
103
D
O
VAL
103
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.555
A
ILE
106
D
O
ILE
106
1_555
A
NA
407
K
NA
NA
1_555
metalc
2.160
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
401
E
MG
MG
1_555
metalc
2.221
A
ASP
190
D
OD2
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.677
A
ASP
190
D
OD1
ASP
190
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.154
A
ASP
192
D
OD2
ASP
192
1_555
A
MG
401
E
MG
MG
1_555
metalc
2.231
A
ASP
192
D
OD1
ASP
192
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.179
A
ASP
256
D
OD2
ASP
256
1_555
A
MG
402
F
MG
MG
1_555
metalc
2.023
A
A
MG
401
E
MG
MG
1_555
A
DCP
403
G
O2A
DCP
1_555
metalc
2.196
A
A
MG
401
E
MG
MG
1_555
A
DCP
403
G
O2G
DCP
1_555
metalc
2.245
A
A
MG
401
E
MG
MG
1_555
A
DCP
403
G
O2B
DCP
1_555
metalc
2.453
B
A
MG
401
E
MG
MG
1_555
A
PPV
404
H
O32
PPV
1_555
metalc
2.565
B
A
MG
401
E
MG
MG
1_555
A
PPV
404
H
O11
PPV
1_555
metalc
2.070
A
MG
401
E
MG
MG
1_555
A
HOH
512
P
O
HOH
1_555
metalc
2.607
A
A
MG
402
F
MG
MG
1_555
A
DCP
403
G
O2A
DCP
1_555
metalc
2.128
A
MG
402
F
MG
MG
1_555
A
HOH
532
P
O
HOH
1_555
metalc
2.447
A
NA
408
L
NA
NA
1_555
A
HOH
632
P
O
HOH
1_555
hydrog
WATSON-CRICK
T
DC
1
A
N3
DC
1
1_555
D
DG
5
C
N1
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
1
A
N4
DC
1
1_555
D
DG
5
C
O6
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
1
A
O2
DC
1
1_555
D
DG
5
C
N2
DG
5
1_555
hydrog
WATSON-CRICK
T
DC
2
A
N3
DC
2
1_555
D
DG
4
C
N1
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
2
A
N4
DC
2
1_555
D
DG
4
C
O6
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
2
A
O2
DC
2
1_555
D
DG
4
C
N2
DG
4
1_555
hydrog
WATSON-CRICK
T
DG
3
A
N1
DG
3
1_555
D
DC
3
C
N3
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
3
A
N2
DG
3
1_555
D
DC
3
C
O2
DC
3
1_555
hydrog
WATSON-CRICK
T
DG
3
A
O6
DG
3
1_555
D
DC
3
C
N4
DC
3
1_555
hydrog
WATSON-CRICK
T
DA
4
A
N1
DA
4
1_555
D
DT
2
C
N3
DT
2
1_555
hydrog
WATSON-CRICK
T
DA
4
A
N6
DA
4
1_555
D
DT
2
C
O4
DT
2
1_555
hydrog
WATSON-CRICK
T
DC
5
A
N3
DC
5
1_555
D
DG
1
C
N1
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
5
A
N4
DC
5
1_555
D
DG
1
C
O6
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
5
A
O2
DC
5
1_555
D
DG
1
C
N2
DG
1
1_555
hydrog
WATSON-CRICK
A
T
DG
7
A
N1
DG
7
1_555
P
DC
10
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
A
T
DG
7
A
N2
DG
7
1_555
P
DC
10
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
A
T
DG
7
A
O6
DG
7
1_555
P
DC
10
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
T
DC
8
A
N3
DC
8
1_555
P
DG
9
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
T
DC
8
A
N4
DC
8
1_555
P
DG
9
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
T
DC
8
A
O2
DC
8
1_555
P
DG
9
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
T
DG
9
A
N1
DG
9
1_555
P
DC
8
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
9
A
N2
DG
9
1_555
P
DC
8
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
T
DG
9
A
O6
DG
9
1_555
P
DC
8
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
T
DC
10
A
N3
DC
10
1_555
P
DG
7
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
T
DC
10
A
N4
DC
10
1_555
P
DG
7
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
T
DC
10
A
O2
DC
10
1_555
P
DG
7
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
T
DA
11
A
N1
DA
11
1_555
P
DT
6
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
T
DA
11
A
N6
DA
11
1_555
P
DT
6
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
T
DT
12
A
N3
DT
12
1_555
P
DA
5
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
T
DT
12
A
O4
DT
12
1_555
P
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
T
DC
13
A
N3
DC
13
1_555
P
DG
4
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
13
A
N4
DC
13
1_555
P
DG
4
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
T
DC
13
A
O2
DC
13
1_555
P
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
T
DA
14
A
N1
DA
14
1_555
P
DT
3
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
T
DA
14
A
N6
DA
14
1_555
P
DT
3
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
T
DG
15
A
N1
DG
15
1_555
P
DC
2
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
T
DG
15
A
N2
DG
15
1_555
P
DC
2
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
T
DG
15
A
O6
DG
15
1_555
P
DC
2
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
T
DC
16
A
N3
DC
16
1_555
P
DG
1
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
16
A
N4
DC
16
1_555
P
DG
1
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
T
DC
16
A
O2
DC
16
1_555
P
DG
1
B
N2
DG
1
1_555
TRANSFERASE, LYASE/DNA
DNA polymerase, TRANSFERASE, LYASE-DNA complex
A
GLY
274
D
GLY
274
1
A
SER
275
D
SER
275
-0.17
DPOLB_HUMAN
UNP
4
1
P06746
MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG
KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD
IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF
DYIQWKYREPKDRSE
4KLF
PDB
1
1
4KLF
CCGACGGCGCATCAGC
4KLF
PDB
2
1
4KLF
GCTGATGCGCC
4KLF
PDB
3
1
4KLF
GTCGG
1
335
4KLF
1
335
P06746
A
1
1
335
1
16
4KLF
1
16
4KLF
T
2
1
16
1
11
4KLF
1
11
4KLF
P
3
1
11
1
5
4KLF
1
5
4KLF
D
4
1
5
2
5
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
150
D
ILE
150
A
PRO
151
D
PRO
151
A
SER
187
D
SER
187
A
SER
188
D
SER
188
A
ILE
174
D
ILE
174
A
VAL
177
D
VAL
177
A
MET
191
D
MET
191
A
THR
196
D
THR
196
A
ARG
253
D
ARG
253
A
LEU
259
D
LEU
259
A
LYS
234
D
LYS
234
A
CYS
239
D
CYS
239
A
ILE
224
D
ILE
224
A
LYS
230
D
LYS
230
A
PHE
291
D
PHE
291
A
ILE
293
D
ILE
293
A
ILE
298
D
ILE
298
A
PRO
300
D
PRO
300
BINDING SITE FOR RESIDUE MG A 401
A
MG
401
Software
7
BINDING SITE FOR RESIDUE MG A 402
A
MG
402
Software
8
BINDING SITE FOR RESIDUE DCP A 403
A
DCP
403
Software
23
BINDING SITE FOR RESIDUE PPV A 404
A
PPV
404
Software
12
BINDING SITE FOR RESIDUE CL A 405
A
CL
405
Software
3
BINDING SITE FOR RESIDUE CL A 406
A
CL
406
Software
3
BINDING SITE FOR RESIDUE NA A 407
A
NA
407
Software
6
BINDING SITE FOR RESIDUE NA A 408
A
NA
408
Software
6
A
ASP
190
D
ASP
190
7
1_555
A
ASP
192
D
ASP
192
7
1_555
A
MG
402
F
MG
7
1_555
A
DCP
403
G
DCP
7
1_555
A
PPV
404
H
PPV
7
1_555
A
HOH
512
P
HOH
7
1_555
P
DC
11
B
DC
11
7
1_555
A
ASP
190
D
ASP
190
8
1_555
A
ASP
192
D
ASP
192
8
1_555
A
ASP
256
D
ASP
256
8
1_555
A
MG
401
E
MG
8
1_555
A
DCP
403
G
DCP
8
1_555
A
HOH
532
P
HOH
8
1_555
P
DC
10
B
DC
10
8
1_555
P
DC
11
B
DC
11
8
1_555
A
ARG
149
D
ARG
149
23
1_555
A
GLY
179
D
GLY
179
23
1_555
A
SER
180
D
SER
180
23
1_555
A
ARG
183
D
ARG
183
23
1_555
A
SER
188
D
SER
188
23
1_555
A
GLY
189
D
GLY
189
23
1_555
A
ASP
190
D
ASP
190
23
1_555
A
ASP
192
D
ASP
192
23
1_555
A
TYR
271
D
TYR
271
23
1_555
A
PHE
272
D
PHE
272
23
1_555
A
THR
273
D
THR
273
23
1_555
A
GLY
274
D
GLY
274
23
1_555
A
ASP
276
D
ASP
276
23
1_555
A
ASN
279
D
ASN
279
23
1_555
A
MG
401
E
MG
23
1_555
A
MG
402
F
MG
23
1_555
A
HOH
504
P
HOH
23
1_555
A
HOH
512
P
HOH
23
1_555
A
HOH
532
P
HOH
23
1_555
A
HOH
585
P
HOH
23
1_555
P
DC
10
B
DC
10
23
1_555
P
HOH
105
N
HOH
23
1_555
T
DG
6
A
DG
6
23
1_555
A
ARG
149
D
ARG
149
12
1_555
A
GLY
179
D
GLY
179
12
1_555
A
SER
180
D
SER
180
12
1_555
A
ARG
183
D
ARG
183
12
1_555
A
SER
188
D
SER
188
12
1_555
A
GLY
189
D
GLY
189
12
1_555
A
ASP
190
D
ASP
190
12
1_555
A
ASP
192
D
ASP
192
12
1_555
A
MG
401
E
MG
12
1_555
A
HOH
504
P
HOH
12
1_555
A
HOH
512
P
HOH
12
1_555
P
DC
11
B
DC
11
12
1_555
A
ASN
294
D
ASN
294
3
1_555
A
THR
297
D
THR
297
3
1_555
A
ARG
299
D
ARG
299
3
1_555
A
LEU
82
D
LEU
82
3
1_555
A
ARG
89
D
ARG
89
3
1_555
A
HOH
649
P
HOH
3
1_555
A
THR
101
D
THR
101
6
1_555
A
VAL
103
D
VAL
103
6
1_555
A
ILE
106
D
ILE
106
6
1_555
P
DG
9
B
DG
9
6
1_555
P
HOH
107
N
HOH
6
1_555
P
HOH
124
N
HOH
6
1_555
A
LYS
60
D
LYS
60
6
1_555
A
LEU
62
D
LEU
62
6
1_555
A
VAL
65
D
VAL
65
6
1_555
A
HOH
632
P
HOH
6
1_555
D
DC
3
C
DC
3
6
1_555
D
HOH
101
O
HOH
6
1_555
4
P 1 21 1