0.007511 0.000000 0.000000 0.000000 0.007511 0.000000 0.000000 0.000000 0.007481 0.00000 0.00000 0.00000 Kumar, S. Narayanan, A. Yernool, D.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 133.140 133.140 133.670 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N P N 76 N O N 77 N O N 78 N O N 79 N C N 80 R C N 81 N O N 82 S C N 83 N O N 84 N C N 85 R C Y 86 N N Y 87 N C Y 88 N N Y 89 N C Y 90 N C N 91 N N Y 92 N N Y 93 N C Y 94 N N Y 95 N C N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N O N 111 N P N 112 N O N 113 N O N 114 N O N 115 N C N 116 R C N 117 N O N 118 S C N 119 N O N 120 N C N 121 R C N 122 N N N 123 N C N 124 N O N 125 N N N 126 N C N 127 N N N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N P N 146 N O N 147 N O N 148 N O N 149 N C N 150 R C N 151 N O N 152 S C N 153 N O N 154 N C N 155 R C Y 156 N N Y 157 N C Y 158 N N Y 159 N C N 160 N C N 161 N O N 162 N N N 163 N C N 164 N N N 165 N N Y 166 N C N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N O N 182 N P N 183 N O N 184 N O N 185 N O N 186 N C N 187 R C N 188 N O N 189 S C N 190 N O N 191 N C N 192 R C N 193 N N N 194 N C N 195 N O N 196 N N N 197 N C N 198 N O N 199 N C N 200 N C N 201 N C N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N O N 225 N N N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N C N 244 N O N 245 N O N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 N C N 258 N C N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C Y 271 N C Y 272 N N Y 273 N C Y 274 N C Y 275 N N N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N O N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 S C N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N C N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C N 339 N C N 340 N C N 341 N C N 342 N N N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N S N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C N 407 N C N 408 N C N 409 N O N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C N 424 N O N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 R C N 438 N O N 439 N C N 440 N O N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N N Y 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N N N 478 S C N 479 N C N 480 N O N 481 N C Y 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C Y 487 N C N 488 N O N 489 N O N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N N N 502 S C N 503 N C N 504 N O N 505 N C N 506 N C N 507 N C N 508 N O N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing Y 93 N sing Y 94 N sing Y 95 N doub N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N doub N 102 N sing N 103 N sing Y 104 N sing Y 105 N doub N 106 N sing Y 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing Y 166 N sing Y 167 N sing Y 168 N doub N 169 N sing Y 170 N sing N 171 N sing Y 172 N doub N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N doub N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing Y 276 N sing Y 277 N doub Y 278 N doub N 279 N sing Y 280 N sing N 281 N sing Y 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing Y 384 N doub Y 385 N sing Y 386 N sing N 387 N sing Y 388 N doub N 389 N sing Y 390 N doub N 391 N sing Y 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N doub N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N doub N 449 N sing N 450 N sing N 451 N sing N 452 N sing Y 453 N doub Y 454 N sing Y 455 N sing N 456 N sing Y 457 N doub Y 458 N sing Y 459 N sing N 460 N sing Y 461 N sing Y 462 N doub N 463 N sing Y 464 N doub N 465 N sing Y 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N doub N 477 N sing N 478 N sing N 479 N sing N 480 N sing Y 481 N doub Y 482 N sing Y 483 N sing N 484 N sing Y 485 N doub N 486 N sing Y 487 N doub N 488 N sing Y 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N doub N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing UK Nat Commun 2041-1723 5 3282 3282 10.1038/ncomms4282 24526190 An asymmetric heterodomain interface stabilizes a response regulator-DNA complex. 2014 10.2210/pdb4kny/pdb pdb_00004kny 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2011-10-30 MARMOSAIC 300 mm CCD SINGLE WAVELENGTH M x-ray 1 1.0332 1.0 23-ID-B APS 1.0332 SYNCHROTRON APS BEAMLINE 23-ID-B 25495.242 KDP operon transcriptional regulatory protein KdpE UNP residues 3-225 2 man polymer 9025.812 Promoter DNA 1 syn polymer 9418.117 Promoter DNA 1 syn polymer 18.015 water 25 nat water no no GAMANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVL SARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFR LLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML GAMANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVL SARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFR LLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML A,B polypeptide(L) no no (DC)(DA)(DT)(DT)(DT)(DT)(DT)(DA)(DT)(DA)(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DA)(DC) (DA)(DC)(DC)(DC)(DC)(DG)(DC)(DC)(DC)(DG) CATTTTTATACTTTTTTTACACCCCGCCCG Y polydeoxyribonucleotide no no (DC)(DG)(DG)(DG)(DC)(DG)(DG)(DG)(DG)(DT)(DG)(DT)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DG) (DT)(DA)(DT)(DA)(DA)(DA)(DA)(DA)(DT)(DG) CGGGCGGGGTGTAAAAAAAGTATAAAAATG Z polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K-12 sample b0694, JW5096, kdpE 83333 Escherichia coli 562 Escherichia coli 1 4.27 71.16 VAPOR DIFFUSION, HANGING DROP 5.5 10-15% PEG 4K, 0.1 M sodium acetate buffer (pH 5.5), 0.1 M MgCl2, VAPOR DIFFUSION, HANGING DROP, temperature 285K 285 -4.656 1 19 Y 1 Z 30 0.045 Y_DC1:DG30_Z 1 -8.125 0.251 0.237 -0.137 10.080 1 20 Y 2 Z 29 -3.706 Y_DA2:DT29_Z 2 -20.279 -0.124 0.123 -0.135 3.428 1 20 Y 3 Z 28 -2.215 Y_DT3:DA28_Z 3 -17.935 -0.579 0.346 -0.155 -3.674 1 20 Y 4 Z 27 -5.788 Y_DT4:DA27_Z 4 -17.600 -0.236 0.495 -0.138 -7.860 1 20 Y 5 Z 26 -5.677 Y_DT5:DA26_Z 5 -19.020 0.048 0.379 -0.140 -11.290 1 20 Y 6 Z 25 -2.911 Y_DT6:DA25_Z 6 -9.831 -0.803 0.242 -0.090 -9.769 1 20 Y 7 Z 24 -2.018 Y_DT7:DA24_Z 7 -11.788 0.547 0.233 -0.244 -6.394 1 20 Y 8 Z 23 -2.066 Y_DA8:DT23_Z 8 -6.847 0.170 0.116 -0.084 10.178 1 20 Y 9 Z 22 6.868 Y_DT9:DA22_Z 9 -1.498 -0.216 0.192 0.132 16.081 1 20 Y 10 Z 21 -1.959 Y_DA10:DT21_Z 10 -6.078 0.061 0.352 -0.077 3.623 1 19 Y 11 Z 20 -0.147 Y_DC11:DG20_Z 11 -15.466 0.974 -0.077 -0.391 -11.075 1 20 Y 12 Z 19 -4.372 Y_DT12:DA19_Z 12 -13.579 -0.278 0.586 -0.122 -7.451 1 20 Y 13 Z 18 -5.151 Y_DT13:DA18_Z 13 -24.769 -0.266 0.392 -0.150 1.219 1 20 Y 14 Z 17 -5.258 Y_DT14:DA17_Z 14 -17.332 -0.695 0.469 -0.147 0.466 Y 15 Z 16 1.505 Y_DT15:DA16_Z 15 -26.360 0.086 0.242 0.350 4.874 1 20 Y 16 Z 15 -4.362 Y_DT16:DA15_Z 16 -34.730 -1.027 0.282 0.055 -0.435 1 20 Y 17 Z 14 -10.025 Y_DT17:DA14_Z 17 -34.040 -1.051 0.199 -0.190 -3.663 1 20 Y 18 Z 13 -6.344 Y_DT18:DA13_Z 18 -14.585 0.070 0.335 -0.117 0.597 1 20 Y 21 Z 10 -6.894 Y_DA21:DT10_Z 19 -13.711 0.802 0.046 -0.055 -6.744 1 19 Y 22 Z 9 -2.011 Y_DC22:DG9_Z 20 -17.428 -0.389 0.251 -0.094 -7.572 1 Y 23 Z 8 -25.378 Y_DC23:DG8_Z 21 -9.147 -1.071 -0.530 0.218 -10.543 1 Y 24 Z 7 -12.785 Y_DC24:DG7_Z 22 -4.970 -1.945 -0.106 0.391 3.117 30.763 Y Y 1 2 20.002 Z Z 30 29 3.153 10.400 -0.697 0.617 YY_DC1DA2:DT29DG30_ZZ 1 2.387 -4.591 28.895 -0.851 1.776 3.243 29.755 Y Y 2 3 1.578 Z Z 29 28 3.296 0.810 0.628 -1.061 YY_DA2DT3:DA28DT29_ZZ 2 -1.085 2.113 29.725 -2.235 -1.449 3.411 38.920 Y Y 3 4 -3.545 Z Z 28 27 3.372 -2.361 -0.104 -0.739 YY_DT3DT4:DA27DA28_ZZ 3 -0.842 1.265 38.842 -0.813 0.050 3.300 39.532 Y Y 4 5 -6.661 Z Z 27 26 3.234 -4.496 0.160 -0.765 YY_DT4DT5:DA26DA27_ZZ 4 0.393 -0.582 39.283 -0.603 -0.190 3.267 35.880 Y Y 5 6 -11.457 Z Z 26 25 3.216 -7.011 0.440 -0.472 YY_DT5DT6:DA25DA26_ZZ 5 2.172 -3.549 35.145 0.239 -0.403 3.169 37.048 Y Y 6 7 4.475 Z Z 25 24 3.232 2.840 -0.010 -0.704 YY_DT6DT7:DA24DA25_ZZ 6 1.430 -2.254 36.916 -1.481 0.203 3.140 29.738 Y Y 7 8 9.540 Z Z 24 23 3.270 4.865 0.187 -0.553 YY_DT7DA8:DT23DA24_ZZ 7 3.303 -6.476 29.164 -2.087 0.321 2.921 25.319 Y Y 8 9 1.083 Z Z 23 22 2.953 0.475 0.519 -0.736 YY_DA8DT9:DA22DT23_ZZ 8 -0.793 1.809 25.302 -1.804 -1.390 3.192 40.710 Y Y 9 10 -3.345 Z Z 22 21 3.189 -2.326 -0.199 -0.135 YY_DT9DA10:DT21DA22_ZZ 9 -0.061 0.088 40.646 0.057 0.279 3.932 38.051 Y Y 10 11 -8.609 Z Z 21 20 3.749 -5.590 0.473 -1.397 YY_DA10DC11:DG20DT21_ZZ 10 2.590 -3.990 37.567 -1.304 -0.337 3.654 28.180 Y Y 11 12 5.623 Z Z 20 19 3.732 2.729 -0.701 -1.163 YY_DC11DT12:DA19DG20_ZZ 11 -2.673 5.507 27.925 -3.111 0.731 3.123 36.975 Y Y 12 13 -17.376 Z Z 19 18 3.117 -10.867 -0.538 -0.530 YY_DT12DT13:DA18DA19_ZZ 12 1.026 -1.641 35.381 0.594 0.984 3.196 33.428 Y Y 13 14 -14.172 Z Z 18 17 3.099 -8.067 0.083 -0.848 YY_DT13DT14:DA17DA18_ZZ 13 -2.579 4.531 32.367 -0.168 -0.561 3.229 43.316 Y Y 14 15 -7.835 Z Z 17 16 3.175 -5.761 0.327 -0.497 YY_DT14DT15:DA16DA17_ZZ 14 3.863 -5.254 42.783 -0.121 -0.072 2.899 30.712 Y Y 15 16 3.116 Z Z 16 15 2.954 1.648 0.087 -0.705 YY_DT15DT16:DA15DA16_ZZ 15 -2.243 4.241 30.588 -1.622 -0.559 3.231 36.835 Y Y 16 17 -6.726 Z Z 15 14 3.197 -4.240 0.166 -0.582 YY_DT16DT17:DA14DA15_ZZ 16 -1.715 2.721 36.560 -0.353 -0.492 3.499 38.451 Y Y 17 18 -4.137 Z Z 14 13 3.479 -2.722 0.531 -0.582 YY_DT17DT18:DA13DA14_ZZ 17 -0.792 1.204 38.351 -0.523 -0.912 3.540 24.416 Y Y 21 22 -3.713 Z Z 10 9 3.413 -1.568 -0.156 -2.062 YY_DA21DC22:DG9DT10_ZZ 18 -1.505 3.564 24.320 -4.355 -0.132 2.578 28.892 Y Y 22 23 25.272 Z Z 9 8 3.292 12.193 -1.350 -0.535 YY_DC22DC23:DG8DG9_ZZ 19 3.646 -7.556 25.991 -3.639 3.474 3.361 33.952 Y Y 23 24 -2.771 Z Z 8 7 3.514 -1.616 0.475 1.978 YY_DC23DC24:DG7DG8_ZZ 20 -3.191 5.474 33.768 3.661 -1.352 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Database references Data collection Database references Refinement description 1 0 2014-02-19 1 1 2014-03-19 1 2 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details RCSB Y RCSB 2013-05-10 REL REL HOH water Chemically synthesized sample Chemically synthesized sample 1ZH4 PDB entry 1ZH4, 3ZQ7 PDB experimental model 3ZQ7 PDB entry 1ZH4, 3ZQ7 PDB experimental model HOH 1 4 HOH HOH 301 A HOH 3 4 HOH HOH 302 A HOH 5 4 HOH HOH 303 A HOH 6 4 HOH HOH 304 A HOH 7 4 HOH HOH 305 A HOH 8 4 HOH HOH 306 A HOH 11 4 HOH HOH 307 A HOH 12 4 HOH HOH 308 A HOH 15 4 HOH HOH 309 A HOH 17 4 HOH HOH 310 A HOH 19 4 HOH HOH 311 A HOH 20 4 HOH HOH 312 A HOH 25 4 HOH HOH 313 A HOH 2 4 HOH HOH 301 B HOH 4 4 HOH HOH 302 B HOH 9 4 HOH HOH 303 B HOH 10 4 HOH HOH 304 B HOH 13 4 HOH HOH 305 B HOH 14 4 HOH HOH 306 B HOH 18 4 HOH HOH 307 B HOH 21 4 HOH HOH 308 B HOH 23 4 HOH HOH 309 B HOH 22 4 HOH HOH 101 Y HOH 24 4 HOH HOH 102 Y HOH 16 4 HOH HOH 101 Z n 1 -1 A ALA 0 n 2 ALA 0 A MET 1 n 3 MET 1 A ALA 2 n 4 ALA 2 A ASN 3 n 5 ASN 3 A VAL 4 n 6 VAL 4 A LEU 5 n 7 LEU 5 A ILE 6 n 8 ILE 6 A VAL 7 n 9 VAL 7 A GLU 8 n 10 GLU 8 A ASP 9 n 11 ASP 9 A GLU 10 n 12 GLU 10 A GLN 11 n 13 GLN 11 A ALA 12 n 14 ALA 12 A ILE 13 n 15 ILE 13 A ARG 14 n 16 ARG 14 A ARG 15 n 17 ARG 15 A PHE 16 n 18 PHE 16 A LEU 17 n 19 LEU 17 A ARG 18 n 20 ARG 18 A THR 19 n 21 THR 19 A ALA 20 n 22 ALA 20 A LEU 21 n 23 LEU 21 A GLU 22 n 24 GLU 22 A GLY 23 n 25 GLY 23 A ASP 24 n 26 ASP 24 A GLY 25 n 27 GLY 25 A MET 26 n 28 MET 26 A ARG 27 n 29 ARG 27 A VAL 28 n 30 VAL 28 A PHE 29 n 31 PHE 29 A GLU 30 n 32 GLU 30 A ALA 31 n 33 ALA 31 A GLU 32 n 34 GLU 32 A THR 33 n 35 THR 33 A LEU 34 n 36 LEU 34 A GLN 35 n 37 GLN 35 A ARG 36 n 38 ARG 36 A GLY 37 n 39 GLY 37 A LEU 38 n 40 LEU 38 A LEU 39 n 41 LEU 39 A GLU 40 n 42 GLU 40 A ALA 41 n 43 ALA 41 A ALA 42 n 44 ALA 42 A THR 43 n 45 THR 43 A ARG 44 n 46 ARG 44 A LYS 45 n 47 LYS 45 A PRO 46 n 48 PRO 46 A ASP 47 n 49 ASP 47 A LEU 48 n 50 LEU 48 A ILE 49 n 51 ILE 49 A ILE 50 n 52 ILE 50 A LEU 51 n 53 LEU 51 A ASP 52 n 54 ASP 52 A LEU 53 n 55 LEU 53 A GLY 54 n 56 GLY 54 A LEU 55 n 57 LEU 55 A PRO 56 n 58 PRO 56 A ASP 57 n 59 ASP 57 A GLY 58 n 60 GLY 58 A ASP 59 n 61 ASP 59 A GLY 60 n 62 GLY 60 A ILE 61 n 63 ILE 61 A GLU 62 n 64 GLU 62 A PHE 63 n 65 PHE 63 A ILE 64 n 66 ILE 64 A ARG 65 n 67 ARG 65 A ASP 66 n 68 ASP 66 A LEU 67 n 69 LEU 67 A ARG 68 n 70 ARG 68 A GLN 69 n 71 GLN 69 A TRP 70 n 72 TRP 70 A SER 71 n 73 SER 71 A ALA 72 n 74 ALA 72 A VAL 73 n 75 VAL 73 A PRO 74 n 76 PRO 74 A VAL 75 n 77 VAL 75 A ILE 76 n 78 ILE 76 A VAL 77 n 79 VAL 77 A LEU 78 n 80 LEU 78 A SER 79 n 81 SER 79 A ALA 80 n 82 ALA 80 A ARG 81 n 83 ARG 81 A SER 82 n 84 SER 82 A GLU 83 n 85 GLU 83 A GLU 84 n 86 GLU 84 A SER 85 n 87 SER 85 A ASP 86 n 88 ASP 86 A LYS 87 n 89 LYS 87 A ILE 88 n 90 ILE 88 A ALA 89 n 91 ALA 89 A ALA 90 n 92 ALA 90 A LEU 91 n 93 LEU 91 A ASP 92 n 94 ASP 92 A ALA 93 n 95 ALA 93 A GLY 94 n 96 GLY 94 A ALA 95 n 97 ALA 95 A ASP 96 n 98 ASP 96 A ASP 97 n 99 ASP 97 A TYR 98 n 100 TYR 98 A LEU 99 n 101 LEU 99 A SER 100 n 102 SER 100 A LYS 101 n 103 LYS 101 A PRO 102 n 104 PRO 102 A PHE 103 n 105 PHE 103 A GLY 104 n 106 GLY 104 A ILE 105 n 107 ILE 105 A GLY 106 n 108 GLY 106 A GLU 107 n 109 GLU 107 A LEU 108 n 110 LEU 108 A GLN 109 n 111 GLN 109 A ALA 110 n 112 ALA 110 A ARG 111 n 113 ARG 111 A LEU 112 n 114 LEU 112 A ARG 113 n 115 ARG 113 A VAL 114 n 116 VAL 114 A ALA 115 n 117 ALA 115 A LEU 116 n 118 LEU 116 A ARG 117 n 119 ARG 117 A ARG 118 n 120 ARG 118 A HIS 119 n 121 HIS 119 A n 122 120 A n 123 121 A n 124 122 A n 125 123 A GLY 124 n 126 ALA 124 A PRO 125 n 127 PRO 125 A ASP 126 n 128 ASP 126 A PRO 127 n 129 PRO 127 A LEU 128 n 130 LEU 128 A VAL 129 n 131 VAL 129 A LYS 130 n 132 LYS 130 A PHE 131 n 133 PHE 131 A SER 132 n 134 SER 132 A ASP 133 n 135 ASP 133 A VAL 134 n 136 VAL 134 A THR 135 n 137 THR 135 A VAL 136 n 138 VAL 136 A ASP 137 n 139 ASP 137 A LEU 138 n 140 LEU 138 A ALA 139 n 141 ALA 139 A ALA 140 n 142 ALA 140 A ARG 141 n 143 ARG 141 A VAL 142 n 144 VAL 142 A ILE 143 n 145 ILE 143 A HIS 144 n 146 HIS 144 A ARG 145 n 147 ARG 145 A GLY 146 n 148 GLY 146 A GLU 147 n 149 GLU 147 A GLU 148 n 150 GLU 148 A GLU 149 n 151 GLU 149 A VAL 150 n 152 VAL 150 A HIS 151 n 153 HIS 151 A LEU 152 n 154 LEU 152 A THR 153 n 155 THR 153 A PRO 154 n 156 PRO 154 A ILE 155 n 157 ILE 155 A GLU 156 n 158 GLU 156 A PHE 157 n 159 PHE 157 A ARG 158 n 160 ARG 158 A LEU 159 n 161 LEU 159 A LEU 160 n 162 LEU 160 A ALA 161 n 163 ALA 161 A VAL 162 n 164 VAL 162 A LEU 163 n 165 LEU 163 A LEU 164 n 166 LEU 164 A ASN 165 n 167 ASN 165 A ASN 166 n 168 ASN 166 A ALA 167 n 169 ALA 167 A GLY 168 n 170 GLY 168 A LYS 169 n 171 LYS 169 A VAL 170 n 172 VAL 170 A LEU 171 n 173 LEU 171 A THR 172 n 174 THR 172 A GLN 173 n 175 GLN 173 A ARG 174 n 176 ARG 174 A GLN 175 n 177 GLN 175 A LEU 176 n 178 LEU 176 A LEU 177 n 179 LEU 177 A ASN 178 n 180 ASN 178 A GLN 179 n 181 GLN 179 A VAL 180 n 182 VAL 180 A TRP 181 n 183 TRP 181 A GLY 182 n 184 GLY 182 A PRO 183 n 185 PRO 183 A ASN 184 n 186 ASN 184 A ALA 185 n 187 ALA 185 A VAL 186 n 188 VAL 186 A GLU 187 n 189 GLU 187 A HIS 188 n 190 HIS 188 A SER 189 n 191 SER 189 A HIS 190 n 192 HIS 190 A TYR 191 n 193 TYR 191 A LEU 192 n 194 LEU 192 A ARG 193 n 195 ARG 193 A ILE 194 n 196 ILE 194 A TYR 195 n 197 TYR 195 A MET 196 n 198 MET 196 A GLY 197 n 199 GLY 197 A HIS 198 n 200 HIS 198 A LEU 199 n 201 LEU 199 A ARG 200 n 202 ARG 200 A GLN 201 n 203 GLN 201 A LYS 202 n 204 LYS 202 A LEU 203 n 205 LEU 203 A GLU 204 n 206 GLU 204 A GLN 205 n 207 GLN 205 A ASP 206 n 208 ASP 206 A PRO 207 n 209 PRO 207 A ALA 208 n 210 ALA 208 A ARG 209 n 211 ARG 209 A PRO 210 n 212 PRO 210 A ARG 211 n 213 ARG 211 A HIS 212 n 214 HIS 212 A PHE 213 n 215 PHE 213 A ILE 214 n 216 ILE 214 A THR 215 n 217 THR 215 A GLU 216 n 218 GLU 216 A THR 217 n 219 THR 217 A GLY 218 n 220 GLY 218 A ILE 219 n 221 ILE 219 A GLY 220 n 222 GLY 220 A TYR 221 n 223 TYR 221 A ARG 222 n 224 ARG 222 A PHE 223 n 225 PHE 223 A MET 224 n 226 MET 224 A LEU 225 n 227 LEU 225 A n 1 -1 B ALA 0 n 2 ALA 0 B MET 1 n 3 MET 1 B ALA 2 n 4 ALA 2 B ASN 3 n 5 ASN 3 B VAL 4 n 6 VAL 4 B LEU 5 n 7 LEU 5 B ILE 6 n 8 ILE 6 B VAL 7 n 9 VAL 7 B GLU 8 n 10 GLU 8 B ASP 9 n 11 ASP 9 B GLU 10 n 12 GLU 10 B GLN 11 n 13 GLN 11 B ALA 12 n 14 ALA 12 B ILE 13 n 15 ILE 13 B ARG 14 n 16 ARG 14 B ARG 15 n 17 ARG 15 B PHE 16 n 18 PHE 16 B LEU 17 n 19 LEU 17 B ARG 18 n 20 ARG 18 B THR 19 n 21 THR 19 B ALA 20 n 22 ALA 20 B LEU 21 n 23 LEU 21 B GLU 22 n 24 GLU 22 B GLY 23 n 25 GLY 23 B ASP 24 n 26 ASP 24 B GLY 25 n 27 GLY 25 B MET 26 n 28 MET 26 B ARG 27 n 29 ARG 27 B VAL 28 n 30 VAL 28 B PHE 29 n 31 PHE 29 B GLU 30 n 32 GLU 30 B ALA 31 n 33 ALA 31 B GLU 32 n 34 GLU 32 B THR 33 n 35 THR 33 B LEU 34 n 36 LEU 34 B GLN 35 n 37 GLN 35 B ARG 36 n 38 ARG 36 B GLY 37 n 39 GLY 37 B LEU 38 n 40 LEU 38 B LEU 39 n 41 LEU 39 B GLU 40 n 42 GLU 40 B ALA 41 n 43 ALA 41 B ALA 42 n 44 ALA 42 B THR 43 n 45 THR 43 B ARG 44 n 46 ARG 44 B LYS 45 n 47 LYS 45 B PRO 46 n 48 PRO 46 B ASP 47 n 49 ASP 47 B LEU 48 n 50 LEU 48 B ILE 49 n 51 ILE 49 B ILE 50 n 52 ILE 50 B LEU 51 n 53 LEU 51 B ASP 52 n 54 ASP 52 B LEU 53 n 55 LEU 53 B GLY 54 n 56 GLY 54 B LEU 55 n 57 LEU 55 B PRO 56 n 58 PRO 56 B ASP 57 n 59 ASP 57 B GLY 58 n 60 GLY 58 B ASP 59 n 61 ASP 59 B GLY 60 n 62 GLY 60 B ILE 61 n 63 ILE 61 B GLU 62 n 64 GLU 62 B PHE 63 n 65 PHE 63 B ILE 64 n 66 ILE 64 B ARG 65 n 67 ARG 65 B ASP 66 n 68 ASP 66 B LEU 67 n 69 LEU 67 B ARG 68 n 70 ARG 68 B GLN 69 n 71 GLN 69 B TRP 70 n 72 TRP 70 B SER 71 n 73 SER 71 B ALA 72 n 74 ALA 72 B VAL 73 n 75 VAL 73 B PRO 74 n 76 PRO 74 B VAL 75 n 77 VAL 75 B ILE 76 n 78 ILE 76 B VAL 77 n 79 VAL 77 B LEU 78 n 80 LEU 78 B SER 79 n 81 SER 79 B ALA 80 n 82 ALA 80 B ARG 81 n 83 ARG 81 B SER 82 n 84 SER 82 B GLU 83 n 85 GLU 83 B GLU 84 n 86 GLU 84 B SER 85 n 87 SER 85 B ASP 86 n 88 ASP 86 B LYS 87 n 89 LYS 87 B ILE 88 n 90 ILE 88 B ALA 89 n 91 ALA 89 B ALA 90 n 92 ALA 90 B LEU 91 n 93 LEU 91 B ASP 92 n 94 ASP 92 B ALA 93 n 95 ALA 93 B GLY 94 n 96 GLY 94 B ALA 95 n 97 ALA 95 B ASP 96 n 98 ASP 96 B ASP 97 n 99 ASP 97 B TYR 98 n 100 TYR 98 B LEU 99 n 101 LEU 99 B SER 100 n 102 SER 100 B LYS 101 n 103 LYS 101 B PRO 102 n 104 PRO 102 B PHE 103 n 105 PHE 103 B GLY 104 n 106 GLY 104 B ILE 105 n 107 ILE 105 B GLY 106 n 108 GLY 106 B GLU 107 n 109 GLU 107 B LEU 108 n 110 LEU 108 B GLN 109 n 111 GLN 109 B ALA 110 n 112 ALA 110 B ARG 111 n 113 ARG 111 B LEU 112 n 114 LEU 112 B ARG 113 n 115 ARG 113 B VAL 114 n 116 VAL 114 B ALA 115 n 117 ALA 115 B LEU 116 n 118 LEU 116 B ARG 117 n 119 ARG 117 B ARG 118 n 120 ARG 118 B HIS 119 n 121 HIS 119 B SER 120 n 122 SER 120 B ALA 121 n 123 ALA 121 B THR 122 n 124 THR 122 B THR 123 n 125 THR 123 B ALA 124 n 126 ALA 124 B PRO 125 n 127 PRO 125 B ASP 126 n 128 ASP 126 B PRO 127 n 129 PRO 127 B LEU 128 n 130 LEU 128 B VAL 129 n 131 VAL 129 B LYS 130 n 132 LYS 130 B PHE 131 n 133 PHE 131 B SER 132 n 134 SER 132 B ASP 133 n 135 ASP 133 B VAL 134 n 136 VAL 134 B THR 135 n 137 THR 135 B VAL 136 n 138 VAL 136 B ASP 137 n 139 ASP 137 B LEU 138 n 140 LEU 138 B ALA 139 n 141 ALA 139 B ALA 140 n 142 ALA 140 B ARG 141 n 143 ARG 141 B VAL 142 n 144 VAL 142 B ILE 143 n 145 ILE 143 B HIS 144 n 146 HIS 144 B ARG 145 n 147 ARG 145 B GLY 146 n 148 GLY 146 B GLU 147 n 149 GLU 147 B GLU 148 n 150 GLU 148 B GLU 149 n 151 GLU 149 B VAL 150 n 152 VAL 150 B HIS 151 n 153 HIS 151 B LEU 152 n 154 LEU 152 B THR 153 n 155 THR 153 B PRO 154 n 156 PRO 154 B ILE 155 n 157 ILE 155 B GLU 156 n 158 GLU 156 B PHE 157 n 159 PHE 157 B ARG 158 n 160 ARG 158 B LEU 159 n 161 LEU 159 B LEU 160 n 162 LEU 160 B ALA 161 n 163 ALA 161 B VAL 162 n 164 VAL 162 B LEU 163 n 165 LEU 163 B LEU 164 n 166 LEU 164 B ASN 165 n 167 ASN 165 B ASN 166 n 168 ASN 166 B ALA 167 n 169 ALA 167 B GLY 168 n 170 GLY 168 B LYS 169 n 171 LYS 169 B VAL 170 n 172 VAL 170 B LEU 171 n 173 LEU 171 B THR 172 n 174 THR 172 B GLN 173 n 175 GLN 173 B ARG 174 n 176 ARG 174 B GLN 175 n 177 GLN 175 B LEU 176 n 178 LEU 176 B LEU 177 n 179 LEU 177 B ASN 178 n 180 ASN 178 B GLN 179 n 181 GLN 179 B VAL 180 n 182 VAL 180 B TRP 181 n 183 TRP 181 B GLY 182 n 184 GLY 182 B PRO 183 n 185 PRO 183 B ASN 184 n 186 ASN 184 B ALA 185 n 187 ALA 185 B VAL 186 n 188 VAL 186 B GLU 187 n 189 GLU 187 B HIS 188 n 190 HIS 188 B SER 189 n 191 SER 189 B HIS 190 n 192 HIS 190 B TYR 191 n 193 TYR 191 B LEU 192 n 194 LEU 192 B ARG 193 n 195 ARG 193 B ILE 194 n 196 ILE 194 B TYR 195 n 197 TYR 195 B MET 196 n 198 MET 196 B GLY 197 n 199 GLY 197 B HIS 198 n 200 HIS 198 B LEU 199 n 201 LEU 199 B ARG 200 n 202 ARG 200 B GLN 201 n 203 GLN 201 B LYS 202 n 204 LYS 202 B LEU 203 n 205 LEU 203 B GLU 204 n 206 GLU 204 B GLN 205 n 207 GLN 205 B ASP 206 n 208 ASP 206 B PRO 207 n 209 PRO 207 B ALA 208 n 210 ALA 208 B ARG 209 n 211 ARG 209 B PRO 210 n 212 PRO 210 B ARG 211 n 213 ARG 211 B HIS 212 n 214 HIS 212 B PHE 213 n 215 PHE 213 B ILE 214 n 216 ILE 214 B THR 215 n 217 THR 215 B GLU 216 n 218 GLU 216 B THR 217 n 219 THR 217 B GLY 218 n 220 GLY 218 B ILE 219 n 221 ILE 219 B GLY 220 n 222 GLY 220 B TYR 221 n 223 TYR 221 B ARG 222 n 224 ARG 222 B PHE 223 n 225 PHE 223 B MET 224 n 226 MET 224 B LEU 225 n 227 LEU 225 B DC 1 n 1 DC 1 Y DA 2 n 2 DA 2 Y DT 3 n 3 DT 3 Y DT 4 n 4 DT 4 Y DT 5 n 5 DT 5 Y DT 6 n 6 DT 6 Y DT 7 n 7 DT 7 Y DA 8 n 8 DA 8 Y DT 9 n 9 DT 9 Y DA 10 n 10 DA 10 Y DC 11 n 11 DC 11 Y DT 12 n 12 DT 12 Y DT 13 n 13 DT 13 Y DT 14 n 14 DT 14 Y DT 15 n 15 DT 15 Y DT 16 n 16 DT 16 Y DT 17 n 17 DT 17 Y DT 18 n 18 DT 18 Y DA 19 n 19 DA 19 Y DC 20 n 20 DC 20 Y DA 21 n 21 DA 21 Y DC 22 n 22 DC 22 Y DC 23 n 23 DC 23 Y DC 24 n 24 DC 24 Y n 25 25 Y n 26 26 Y n 27 27 Y n 28 28 Y n 29 29 Y n 30 30 Y n 1 1 Z n 2 2 Z n 3 3 Z n 4 4 Z n 5 5 Z n 6 6 Z DG 7 n 7 DG 7 Z DG 8 n 8 DG 8 Z DG 9 n 9 DG 9 Z DT 10 n 10 DT 10 Z DG 11 n 11 DG 11 Z DT 12 n 12 DT 12 Z DA 13 n 13 DA 13 Z DA 14 n 14 DA 14 Z DA 15 n 15 DA 15 Z DA 16 n 16 DA 16 Z DA 17 n 17 DA 17 Z DA 18 n 18 DA 18 Z DA 19 n 19 DA 19 Z DG 20 n 20 DG 20 Z DT 21 n 21 DT 21 Z DA 22 n 22 DA 22 Z DT 23 n 23 DT 23 Z DA 24 n 24 DA 24 Z DA 25 n 25 DA 25 Z DA 26 n 26 DA 26 Z DA 27 n 27 DA 27 Z DA 28 n 28 DA 28 Z DT 29 n 29 DT 29 Z DG 30 n 30 DG 30 Z author_and_software_defined_assembly PISA 4 tetrameric 7480 -44 28300 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 29 A O PHE 31 A N ILE 6 A N ILE 8 A N VAL 7 A N VAL 9 A O ILE 50 A O ILE 52 A N LEU 51 A N LEU 53 A O LEU 78 A O LEU 80 A N VAL 77 A N VAL 79 A O ASP 97 A O ASP 99 A N PHE 131 A N PHE 133 A O VAL 134 A O VAL 136 A N THR 135 A N THR 137 A O HIS 144 A O HIS 146 A N ARG 145 A N ARG 147 A O GLU 148 A O GLU 150 A N LEU 171 A N LEU 173 A O TYR 221 A O TYR 223 A O ARG 222 A O ARG 224 A N ILE 214 A N ILE 216 B O PHE 29 B O PHE 31 B N ILE 6 B N ILE 8 B N VAL 7 B N VAL 9 B O ILE 50 B O ILE 52 B N LEU 51 B N LEU 53 B O LEU 78 B O LEU 80 B N VAL 77 B N VAL 79 B O LEU 99 B O LEU 101 B N PHE 131 B N PHE 133 B O VAL 134 B O VAL 136 B N THR 135 B N THR 137 B O HIS 144 B O HIS 146 B N ARG 145 B N ARG 147 B O GLU 148 B O GLU 150 B N LEU 171 B N LEU 173 B O TYR 221 B O TYR 223 B O ARG 222 B O ARG 224 B N ILE 214 B N ILE 216 1 A CB ALA 124 A CB ALA 126 1 Y 1 A GLY -1 A GLY 1 1 Y 1 A SER 120 A SER 122 1 Y 1 A ALA 121 A ALA 123 1 Y 1 A THR 122 A THR 124 1 Y 1 A THR 123 A THR 125 1 Y 1 B GLY -1 B GLY 1 1 Y 1 Y DC 25 C DC 25 1 Y 1 Y DG 26 C DG 26 1 Y 1 Y DC 27 C DC 27 1 Y 1 Y DC 28 C DC 28 1 Y 1 Y DC 29 C DC 29 1 Y 1 Y DG 30 C DG 30 1 Y 1 Z DC 1 D DC 1 1 Y 1 Z DG 2 D DG 2 1 Y 1 Z DG 3 D DG 3 1 Y 1 Z DG 4 D DG 4 1 Y 1 Z DC 5 D DC 5 1 Y 1 Z DG 6 D DG 6 1 Y 1 B Y OH OP2 TYR DT 191 17 2.14 1 2.13 0.30 108.30 110.43 Y Y Y O4' C1' N1 DT DT DT 17 17 17 N 1 1.91 0.30 108.30 110.21 Y Y Y O4' C1' N1 DT DT DT 18 18 18 N 1 -5.13 0.80 102.40 97.27 Y Y Y C3' C2' C1' DC DC DC 20 20 20 N 1 2.74 0.30 108.30 111.04 Y Y Y O4' C1' N1 DC DC DC 20 20 20 N 1 2.28 0.30 108.30 110.58 Y Y Y O4' C1' N1 DC DC DC 23 23 23 N 1 3.22 0.30 108.30 111.52 Z Z Z O4' C1' N1 DT DT DT 10 10 10 N 1 2.55 0.30 108.30 110.85 Z Z Z O4' C1' N9 DG DG DG 20 20 20 N 1 1.89 0.30 108.30 110.19 Z Z Z O4' C1' N9 DA DA DA 25 25 25 N 1 A TRP 70 -148.13 -22.22 1 A SER 132 54.82 -115.81 1 B ASP 24 -118.12 54.17 1 B THR 123 54.05 77.30 1 B SER 132 53.17 -125.20 1 B ASN 166 -114.25 54.20 1 B PRO 183 -86.62 38.64 1 B ASN 184 -141.15 -4.65 0.2483 0.2086 0.2116 2.945 66.570 2011 26044 25980 7.74 99.80 0.40 Random 1 1.34 MOLECULAR REPLACEMENT 24.55 0.90 1.11 PDB entry 1ZH4, 3ZQ7 ML FLAT BULK SOLVENT MODEL 2.945 66.570 25 4562 0 981 3556 0.003 4718 0.763 6590 19.537 1843 0.046 748 0.003 691 0.3863 0.3003 3.0188 138 1672 100.00 0.2977 0.2743 3.1004 143 1695 100.00 0.2886 0.2555 3.1916 146 1669 100.00 0.3374 0.2558 3.2947 141 1679 100.00 0.3270 0.2683 3.4124 143 1692 100.00 0.2565 0.2352 3.5490 140 1698 100.00 0.2581 0.2170 3.7105 140 1698 100.00 0.2898 0.2085 3.9061 141 1696 100.00 0.2207 0.1977 4.1508 141 1707 100.00 0.2130 0.1847 4.4713 146 1715 100.00 0.2224 0.1722 4.9211 144 1722 100.00 0.2271 0.1965 5.6329 145 1741 100.00 0.2848 0.2274 7.0955 149 1763 100.00 0.2004 0.1821 66.5870 154 1822 97.00 2.95 66.57 4KNY 26044 25980 0 0 1 12.1 8.4 99.75 2.95 3.05 3.8 1 8.4 100 data reduction MOSFLM phasing PHASER refinement PHENIX (phenix.refine: dev_1352) data scaling SCALA Crystal structure of the response regulator KdpE complexed to DNA in an active-like conformation 1 N N 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N A GLU 10 A GLU 12 HELX_P A ASP 24 A ASP 26 1 1 15 A THR 33 A THR 35 HELX_P A LYS 45 A LYS 47 1 2 13 A ASP 59 A ASP 61 HELX_P A GLN 69 A GLN 71 1 3 11 A GLU 83 A GLU 85 HELX_P A GLY 94 A GLY 96 1 4 12 A GLY 104 A GLY 106 HELX_P A ARG 118 A ARG 120 1 5 15 A THR 153 A THR 155 HELX_P A ASN 166 A ASN 168 1 6 14 A GLN 173 A GLN 175 HELX_P A TRP 181 A TRP 183 1 7 9 A HIS 188 A HIS 190 HELX_P A GLU 204 A GLU 206 1 8 17 B GLU 10 B GLU 12 HELX_P B ASP 24 B ASP 26 1 9 15 B THR 33 B THR 35 HELX_P B ARG 44 B ARG 46 1 10 12 B ASP 59 B ASP 61 HELX_P B ARG 68 B ARG 70 1 11 10 B GLU 83 B GLU 85 HELX_P B GLY 94 B GLY 96 1 12 12 B GLY 104 B GLY 106 HELX_P B ARG 117 B ARG 119 1 13 14 B THR 153 B THR 155 HELX_P B ASN 166 B ASN 168 1 14 14 B GLN 173 B GLN 175 HELX_P B TRP 181 B TRP 183 1 15 9 B HIS 190 B HIS 192 HELX_P B GLU 204 B GLU 206 1 16 15 hydrog WATSON-CRICK Y DC 1 C N3 DC 1 1_555 Z DG 30 D N1 DG 30 1_555 hydrog WATSON-CRICK Y DC 1 C N4 DC 1 1_555 Z DG 30 D O6 DG 30 1_555 hydrog WATSON-CRICK Y DC 1 C O2 DC 1 1_555 Z DG 30 D N2 DG 30 1_555 hydrog WATSON-CRICK Y DA 2 C N1 DA 2 1_555 Z DT 29 D N3 DT 29 1_555 hydrog WATSON-CRICK Y DA 2 C N6 DA 2 1_555 Z DT 29 D O4 DT 29 1_555 hydrog WATSON-CRICK Y DT 3 C N3 DT 3 1_555 Z DA 28 D N1 DA 28 1_555 hydrog WATSON-CRICK Y DT 3 C O4 DT 3 1_555 Z DA 28 D N6 DA 28 1_555 hydrog WATSON-CRICK Y DT 4 C N3 DT 4 1_555 Z DA 27 D N1 DA 27 1_555 hydrog WATSON-CRICK Y DT 4 C O4 DT 4 1_555 Z DA 27 D N6 DA 27 1_555 hydrog WATSON-CRICK Y DT 5 C N3 DT 5 1_555 Z DA 26 D N1 DA 26 1_555 hydrog WATSON-CRICK Y DT 5 C O4 DT 5 1_555 Z DA 26 D N6 DA 26 1_555 hydrog WATSON-CRICK Y DT 6 C N3 DT 6 1_555 Z DA 25 D N1 DA 25 1_555 hydrog WATSON-CRICK Y DT 6 C O4 DT 6 1_555 Z DA 25 D N6 DA 25 1_555 hydrog WATSON-CRICK Y DT 7 C N3 DT 7 1_555 Z DA 24 D N1 DA 24 1_555 hydrog WATSON-CRICK Y DT 7 C O4 DT 7 1_555 Z DA 24 D N6 DA 24 1_555 hydrog WATSON-CRICK Y DA 8 C N1 DA 8 1_555 Z DT 23 D N3 DT 23 1_555 hydrog WATSON-CRICK Y DA 8 C N6 DA 8 1_555 Z DT 23 D O4 DT 23 1_555 hydrog WATSON-CRICK Y DT 9 C N3 DT 9 1_555 Z DA 22 D N1 DA 22 1_555 hydrog WATSON-CRICK Y DT 9 C O4 DT 9 1_555 Z DA 22 D N6 DA 22 1_555 hydrog WATSON-CRICK Y DA 10 C N1 DA 10 1_555 Z DT 21 D N3 DT 21 1_555 hydrog WATSON-CRICK Y DA 10 C N6 DA 10 1_555 Z DT 21 D O4 DT 21 1_555 hydrog WATSON-CRICK Y DC 11 C N3 DC 11 1_555 Z DG 20 D N1 DG 20 1_555 hydrog WATSON-CRICK Y DC 11 C N4 DC 11 1_555 Z DG 20 D O6 DG 20 1_555 hydrog WATSON-CRICK Y DC 11 C O2 DC 11 1_555 Z DG 20 D N2 DG 20 1_555 hydrog WATSON-CRICK Y DT 12 C N3 DT 12 1_555 Z DA 19 D N1 DA 19 1_555 hydrog WATSON-CRICK Y DT 12 C O4 DT 12 1_555 Z DA 19 D N6 DA 19 1_555 hydrog WATSON-CRICK Y DT 13 C N3 DT 13 1_555 Z DA 18 D N1 DA 18 1_555 hydrog WATSON-CRICK Y DT 13 C O4 DT 13 1_555 Z DA 18 D N6 DA 18 1_555 hydrog WATSON-CRICK Y DT 14 C N3 DT 14 1_555 Z DA 17 D N1 DA 17 1_555 hydrog WATSON-CRICK Y DT 14 C O4 DT 14 1_555 Z DA 17 D N6 DA 17 1_555 hydrog DT-DA PAIR Y DT 15 C N3 DT 15 1_555 Z DA 16 D N1 DA 16 1_555 hydrog WATSON-CRICK Y DT 16 C N3 DT 16 1_555 Z DA 15 D N1 DA 15 1_555 hydrog WATSON-CRICK Y DT 16 C O4 DT 16 1_555 Z DA 15 D N6 DA 15 1_555 hydrog WATSON-CRICK Y DT 17 C N3 DT 17 1_555 Z DA 14 D N1 DA 14 1_555 hydrog WATSON-CRICK Y DT 17 C O4 DT 17 1_555 Z DA 14 D N6 DA 14 1_555 hydrog WATSON-CRICK Y DT 18 C N3 DT 18 1_555 Z DA 13 D N1 DA 13 1_555 hydrog WATSON-CRICK Y DT 18 C O4 DT 18 1_555 Z DA 13 D N6 DA 13 1_555 hydrog WATSON-CRICK Y DA 21 C N1 DA 21 1_555 Z DT 10 D N3 DT 10 1_555 hydrog WATSON-CRICK Y DA 21 C N6 DA 21 1_555 Z DT 10 D O4 DT 10 1_555 hydrog WATSON-CRICK Y DC 22 C N3 DC 22 1_555 Z DG 9 D N1 DG 9 1_555 hydrog WATSON-CRICK Y DC 22 C N4 DC 22 1_555 Z DG 9 D O6 DG 9 1_555 hydrog WATSON-CRICK Y DC 22 C O2 DC 22 1_555 Z DG 9 D N2 DG 9 1_555 hydrog DC-DG PAIR Y DC 23 C N4 DC 23 1_555 Z DG 8 D O6 DG 8 1_555 hydrog DC-DG PAIR Y DC 24 C N4 DC 24 1_555 Z DG 7 D O6 DG 7 1_555 TRANSCRIPTION REGULATOR/DNA receiver domain, DNA-binding domain, TRANSCRIPTION REGULATOR-DNA complex A LYS 101 A LYS 103 1 A PRO 102 A PRO 104 -1.39 B LYS 101 B LYS 103 1 B PRO 102 B PRO 104 -2.74 KDPE_ECOLI UNP 1 3 P21866 NVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARS EESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAV LLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML 4KNY PDB 2 4KNY 4KNY PDB 3 4KNY 3 225 4KNY 3 225 P21866 A 1 5 227 3 225 4KNY 3 225 P21866 B 1 5 227 1 30 4KNY 1 30 4KNY Y 2 1 30 1 30 4KNY 1 30 4KNY Z 3 1 30 1 expression tag GLY -1 4KNY A P21866 UNP 1 1 expression tag ALA 0 4KNY A P21866 UNP 2 1 expression tag MET 1 4KNY A P21866 UNP 3 1 expression tag ALA 2 4KNY A P21866 UNP 4 2 expression tag GLY -1 4KNY B P21866 UNP 1 2 expression tag ALA 0 4KNY B P21866 UNP 2 2 expression tag MET 1 4KNY B P21866 UNP 3 2 expression tag ALA 2 4KNY B P21866 UNP 4 5 4 3 5 4 3 parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A MET 26 A MET 28 A ALA 31 A ALA 33 A ALA 2 A ALA 4 A VAL 7 A VAL 9 A LEU 48 A LEU 50 A ASP 52 A ASP 54 A VAL 75 A VAL 77 A SER 79 A SER 81 A ASP 97 A ASP 99 A SER 100 A SER 102 A VAL 129 A VAL 131 A PHE 131 A PHE 133 A VAL 134 A VAL 136 A ASP 137 A ASP 139 A VAL 142 A VAL 144 A ARG 145 A ARG 147 A GLU 148 A GLU 150 A GLU 149 A GLU 151 A VAL 170 A VAL 172 A THR 172 A THR 174 A GLY 220 A GLY 222 A PHE 223 A PHE 225 A PHE 213 A PHE 215 A GLU 216 A GLU 218 B ARG 27 B ARG 29 B ALA 31 B ALA 33 B ASN 3 B ASN 5 B VAL 7 B VAL 9 B LEU 48 B LEU 50 B ASP 52 B ASP 54 B VAL 75 B VAL 77 B SER 79 B SER 81 B ASP 97 B ASP 99 B SER 100 B SER 102 B VAL 129 B VAL 131 B PHE 131 B PHE 133 B VAL 134 B VAL 136 B ASP 137 B ASP 139 B VAL 142 B VAL 144 B ARG 145 B ARG 147 B GLU 148 B GLU 150 B VAL 150 B VAL 152 B VAL 170 B VAL 172 B THR 172 B THR 174 B GLY 220 B GLY 222 B PHE 223 B PHE 225 B PHE 213 B PHE 215 B GLU 216 B GLU 218 96 P 43 21 2