0.036576
0.000000
0.005323
0.000000
0.025426
0.000000
0.000000
0.000000
0.032938
0.00000
0.00000
0.00000
Kondo, J.
Yamada, T.
Hirose, C.
Tanaka, Y.
Ono, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
98.280
90.000
27.340
39.330
30.680
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
GE
Angew.Chem.Int.Ed.Engl.
9999
1433-7851
53
2385
2388
10.1002/anie.201309066
24478025
Crystal Structure of Metallo DNA Duplex Containing Consecutive Watson-Crick-like T-Hg(II) -T Base Pairs
2014
10.2210/pdb4l25/pdb
pdb_00004l25
100
1
2011-10-16
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
BL-1A
Photon Factory
1.0
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-1A
3654.378
DNA (5'-D(*CP*GP*CP*GP*AP*TP*TP*TP*CP*GP*CP*G)-3')
2
syn
polymer
18.015
water
170
nat
water
no
no
(DC)(DG)(DC)(DG)(DA)(DT)(DT)(DT)(DC)(DG)(DC)(DG)
CGCGATTTCGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
1
2.23
44.92
VAPOR DIFFUSION, HANGING DROP
7.0
Sodium Cacodylate, Spermine tetrahydrochloride, 2-methyl-2,4-pentanediol, ammonium chloride , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
5.853
1
19
A
1
B
12
-0.282
A_DC1:DG12_B
1
-2.725
0.330
-0.318
-0.147
3.381
1
19
A
2
B
11
-2.544
A_DG2:DC11_B
2
4.912
-0.234
-0.138
-0.140
-5.930
1
19
A
3
B
10
0.135
A_DC3:DG10_B
3
0.349
0.469
-0.214
-0.176
13.793
1
19
A
4
B
9
-2.771
A_DG4:DC9_B
4
-5.944
-0.285
-0.102
-0.062
1.290
A
5
B
8
-103.728
A_DA5:DT8_B
5
-10.484
3.190
-0.215
3.036
4.150
B
5
A
8
-103.740
B_DA5:DT8_A
6
-8.325
3.210
-0.190
3.055
12.770
1
19
B
4
A
9
-3.475
B_DG4:DC9_A
7
-4.729
-0.289
-0.055
-0.099
-3.706
1
19
B
3
A
10
-1.278
B_DC3:DG10_A
8
1.660
0.522
-0.290
-0.255
1.465
1
19
B
2
A
11
-1.703
B_DG2:DC11_A
9
5.534
-0.317
-0.095
-0.158
8.448
1
19
B
1
A
12
-1.892
B_DC1:DG12_A
10
-2.989
0.421
-0.457
-0.203
-3.976
9.585
A
A
1
2
-6.980
B
B
12
11
-3.527
-1.153
-0.291
5.299
AA_DC1DG2:DC11DG12_BB
1
-2.203
13.338
9.257
28.973
6.980
-2.987
52.355
A
A
2
3
-8.402
B
B
11
10
-3.154
-7.391
0.409
-1.069
AA_DG2DC3:DG10DC11_BB
2
-0.075
0.085
51.867
-1.671
-0.459
-3.092
8.319
A
A
3
4
-2.030
B
B
10
9
-4.181
-0.263
-0.045
5.661
AA_DC3DG4:DC9DG10_BB
3
6.030
-46.497
5.728
38.083
-21.190
0.371
171.755
A
A
4
5
86.263
B
B
9
8
2.916
168.870
3.023
-2.188
AA_DG4DA5:DT8DC9_BB
4
2.658
-1.358
84.076
-1.828
-1.504
-0.063
179.202
A
B
5
5
-69.892
B
A
8
8
-2.646
-139.649
-1.010
-6.477
AB_DA5DA5:DT8DT8_AB
5
-110.473
55.290
131.392
-3.467
0.686
-0.352
-171.794
B
B
5
4
86.413
A
A
8
9
-2.953
-169.096
-2.964
2.160
BB_DA5DG4:DC9DT8_AA
6
-2.768
-1.415
-82.008
-1.836
-1.474
2.743
-7.100
B
B
4
3
0.080
A
A
9
10
4.087
-0.009
0.039
-5.504
BB_DG4DC3:DG10DC9_AA
7
-5.301
-48.311
-4.726
44.485
-24.388
3.106
-53.575
B
B
3
2
-7.578
A
A
10
11
3.249
6.814
-0.143
0.988
BB_DC3DG2:DC11DG10_AA
8
-1.419
-1.578
-53.154
-1.514
-0.246
2.752
-10.785
B
B
2
1
3.302
A
A
11
12
3.479
-0.603
0.361
-5.209
BB_DG2DC1:DG12DC11_AA
9
4.300
23.542
-9.874
28.680
8.805
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Refinement description
1
0
2014-03-05
1
1
2023-11-08
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
PDBJ
2013-06-04
REL
REL
HOH
water
Chemically synthesized
sample
4L26
PDB
experimental model
HOH
102
2
HOH
HOH
101
A
HOH
103
2
HOH
HOH
102
A
HOH
104
2
HOH
HOH
103
A
HOH
106
2
HOH
HOH
104
A
HOH
107
2
HOH
HOH
105
A
HOH
109
2
HOH
HOH
106
A
HOH
115
2
HOH
HOH
107
A
HOH
117
2
HOH
HOH
108
A
HOH
118
2
HOH
HOH
109
A
HOH
121
2
HOH
HOH
110
A
HOH
122
2
HOH
HOH
111
A
HOH
123
2
HOH
HOH
112
A
HOH
124
2
HOH
HOH
113
A
HOH
125
2
HOH
HOH
114
A
HOH
128
2
HOH
HOH
115
A
HOH
130
2
HOH
HOH
116
A
HOH
134
2
HOH
HOH
117
A
HOH
137
2
HOH
HOH
118
A
HOH
139
2
HOH
HOH
119
A
HOH
141
2
HOH
HOH
120
A
HOH
142
2
HOH
HOH
121
A
HOH
147
2
HOH
HOH
122
A
HOH
149
2
HOH
HOH
123
A
HOH
151
2
HOH
HOH
124
A
HOH
152
2
HOH
HOH
125
A
HOH
155
2
HOH
HOH
126
A
HOH
156
2
HOH
HOH
127
A
HOH
158
2
HOH
HOH
128
A
HOH
159
2
HOH
HOH
129
A
HOH
162
2
HOH
HOH
130
A
HOH
164
2
HOH
HOH
131
A
HOH
165
2
HOH
HOH
132
A
HOH
166
2
HOH
HOH
133
A
HOH
167
2
HOH
HOH
134
A
HOH
170
2
HOH
HOH
135
A
HOH
171
2
HOH
HOH
136
A
HOH
172
2
HOH
HOH
137
A
HOH
173
2
HOH
HOH
138
A
HOH
174
2
HOH
HOH
139
A
HOH
175
2
HOH
HOH
140
A
HOH
177
2
HOH
HOH
141
A
HOH
179
2
HOH
HOH
142
A
HOH
181
2
HOH
HOH
143
A
HOH
184
2
HOH
HOH
144
A
HOH
188
2
HOH
HOH
145
A
HOH
190
2
HOH
HOH
146
A
HOH
192
2
HOH
HOH
147
A
HOH
194
2
HOH
HOH
148
A
HOH
195
2
HOH
HOH
149
A
HOH
196
2
HOH
HOH
150
A
HOH
199
2
HOH
HOH
151
A
HOH
200
2
HOH
HOH
152
A
HOH
202
2
HOH
HOH
153
A
HOH
206
2
HOH
HOH
154
A
HOH
207
2
HOH
HOH
155
A
HOH
211
2
HOH
HOH
156
A
HOH
213
2
HOH
HOH
157
A
HOH
215
2
HOH
HOH
158
A
HOH
216
2
HOH
HOH
159
A
HOH
217
2
HOH
HOH
160
A
HOH
220
2
HOH
HOH
161
A
HOH
222
2
HOH
HOH
162
A
HOH
224
2
HOH
HOH
163
A
HOH
234
2
HOH
HOH
164
A
HOH
235
2
HOH
HOH
165
A
HOH
238
2
HOH
HOH
166
A
HOH
239
2
HOH
HOH
167
A
HOH
240
2
HOH
HOH
168
A
HOH
245
2
HOH
HOH
169
A
HOH
246
2
HOH
HOH
170
A
HOH
251
2
HOH
HOH
171
A
HOH
254
2
HOH
HOH
172
A
HOH
255
2
HOH
HOH
173
A
HOH
263
2
HOH
HOH
174
A
HOH
272
2
HOH
HOH
175
A
HOH
276
2
HOH
HOH
176
A
HOH
277
2
HOH
HOH
177
A
HOH
278
2
HOH
HOH
178
A
HOH
101
2
HOH
HOH
101
B
HOH
105
2
HOH
HOH
102
B
HOH
108
2
HOH
HOH
103
B
HOH
110
2
HOH
HOH
104
B
HOH
111
2
HOH
HOH
105
B
HOH
112
2
HOH
HOH
106
B
HOH
113
2
HOH
HOH
107
B
HOH
114
2
HOH
HOH
108
B
HOH
116
2
HOH
HOH
109
B
HOH
119
2
HOH
HOH
110
B
HOH
120
2
HOH
HOH
111
B
HOH
126
2
HOH
HOH
112
B
HOH
127
2
HOH
HOH
113
B
HOH
129
2
HOH
HOH
114
B
HOH
131
2
HOH
HOH
115
B
HOH
132
2
HOH
HOH
116
B
HOH
133
2
HOH
HOH
117
B
HOH
135
2
HOH
HOH
118
B
HOH
136
2
HOH
HOH
119
B
HOH
138
2
HOH
HOH
120
B
HOH
140
2
HOH
HOH
121
B
HOH
143
2
HOH
HOH
122
B
HOH
144
2
HOH
HOH
123
B
HOH
145
2
HOH
HOH
124
B
HOH
146
2
HOH
HOH
125
B
HOH
148
2
HOH
HOH
126
B
HOH
150
2
HOH
HOH
127
B
HOH
153
2
HOH
HOH
128
B
HOH
154
2
HOH
HOH
129
B
HOH
157
2
HOH
HOH
130
B
HOH
160
2
HOH
HOH
131
B
HOH
161
2
HOH
HOH
132
B
HOH
163
2
HOH
HOH
133
B
HOH
168
2
HOH
HOH
134
B
HOH
176
2
HOH
HOH
135
B
HOH
178
2
HOH
HOH
136
B
HOH
180
2
HOH
HOH
137
B
HOH
182
2
HOH
HOH
138
B
HOH
185
2
HOH
HOH
139
B
HOH
186
2
HOH
HOH
140
B
HOH
187
2
HOH
HOH
141
B
HOH
189
2
HOH
HOH
142
B
HOH
193
2
HOH
HOH
143
B
HOH
197
2
HOH
HOH
144
B
HOH
198
2
HOH
HOH
145
B
HOH
201
2
HOH
HOH
146
B
HOH
203
2
HOH
HOH
147
B
HOH
204
2
HOH
HOH
148
B
HOH
205
2
HOH
HOH
149
B
HOH
208
2
HOH
HOH
150
B
HOH
209
2
HOH
HOH
151
B
HOH
210
2
HOH
HOH
152
B
HOH
212
2
HOH
HOH
153
B
HOH
214
2
HOH
HOH
154
B
HOH
218
2
HOH
HOH
155
B
HOH
219
2
HOH
HOH
156
B
HOH
221
2
HOH
HOH
157
B
HOH
223
2
HOH
HOH
158
B
HOH
225
2
HOH
HOH
159
B
HOH
226
2
HOH
HOH
160
B
HOH
228
2
HOH
HOH
161
B
HOH
229
2
HOH
HOH
162
B
HOH
230
2
HOH
HOH
163
B
HOH
231
2
HOH
HOH
164
B
HOH
232
2
HOH
HOH
165
B
HOH
233
2
HOH
HOH
166
B
HOH
237
2
HOH
HOH
167
B
HOH
241
2
HOH
HOH
168
B
HOH
242
2
HOH
HOH
169
B
HOH
243
2
HOH
HOH
170
B
HOH
244
2
HOH
HOH
171
B
HOH
247
2
HOH
HOH
172
B
HOH
248
2
HOH
HOH
173
B
HOH
249
2
HOH
HOH
174
B
HOH
250
2
HOH
HOH
175
B
HOH
252
2
HOH
HOH
176
B
HOH
253
2
HOH
HOH
177
B
HOH
256
2
HOH
HOH
178
B
HOH
257
2
HOH
HOH
179
B
HOH
258
2
HOH
HOH
180
B
HOH
259
2
HOH
HOH
181
B
HOH
260
2
HOH
HOH
182
B
HOH
262
2
HOH
HOH
183
B
HOH
265
2
HOH
HOH
184
B
HOH
266
2
HOH
HOH
185
B
HOH
269
2
HOH
HOH
186
B
HOH
270
2
HOH
HOH
187
B
HOH
273
2
HOH
HOH
188
B
HOH
274
2
HOH
HOH
189
B
HOH
275
2
HOH
HOH
190
B
HOH
279
2
HOH
HOH
191
B
HOH
280
2
HOH
HOH
192
B
DC
1
n
1
DC
1
A
DG
2
n
2
DG
2
A
DC
3
n
3
DC
3
A
DG
4
n
4
DG
4
A
DA
5
n
5
DA
5
A
DT
6
n
6
DT
6
A
DT
7
n
7
DT
7
A
DT
8
n
8
DT
8
A
DC
9
n
9
DC
9
A
DG
10
n
10
DG
10
A
DC
11
n
11
DC
11
A
DG
12
n
12
DG
12
A
DC
1
n
1
DC
1
B
DG
2
n
2
DG
2
B
DC
3
n
3
DC
3
B
DG
4
n
4
DG
4
B
DA
5
n
5
DA
5
B
DT
6
n
6
DT
6
B
DT
7
n
7
DT
7
B
DT
8
n
8
DT
8
B
DC
9
n
9
DC
9
B
DG
10
n
10
DG
10
B
DC
11
n
11
DC
11
B
DG
12
n
12
DG
12
B
author_and_software_defined_assembly
PISA
2
dimeric
1380
-11
3970
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
dna-rna_free.param
water_rep.param
ion.param
51.240
15.1144
6.300
-0.0690
0.0000
3.4160
-2.2110
0.0000
2.2800
0.2405
0.2305
1.1000
19.08
2409
24438
9.2000
93.1000
1.000
0.500
1
0.000
MOLECULAR REPLACEMENT
4L26
50.0215
1.1000
19.08
170
654
0
484
0
0.003
0.895
1.013
1.500
1.462
2.000
0.3521
0.3527
1.1400
251
2173
2424
10
91.6000
0.3317
0.3190
1.1800
233
2141
2374
10
91.8000
0.2816
0.2756
1.2400
219
2186
2405
10
92.9000
0.2840
0.2775
1.3000
238
2217
2455
10
93.5000
0.2625
0.2690
1.3900
248
2214
2462
10
94.3000
0.2482
0.2432
1.4900
245
2233
2478
10
95.4000
0.2440
0.2262
1.6400
241
2288
2529
10
95.9000
0.2232
0.2039
1.8800
268
2268
2536
10
97.1000
0.2184
0.2044
2.3700
261
2333
2594
10
97.8000
0.2237
0.2173
100.0000
205
1976
2181
10
81.5000
1.1
19.1
4L25
24441
1
refinement
Axel T. Brunger
axel.brunger@yale.edu
Fortran_77
http://cns-online.org/
CNS
package
data extraction
PDB
deposit@deposit.rcsb.org
April 22, 2011
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.11
data reduction
CrystalClear
data scaling
CrystalClear
phasing
PHENIX
Crystal structure of DNA duplex containing consecutive T-T mispairs
1
N
N
1
N
N
2
N
N
2
N
N
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
12
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
12
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
12
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
11
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
11
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
11
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
10
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
10
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
10
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
9
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
9
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
9
B
N4
DC
9
1_555
hydrog
REVERSED HOOGSTEEN
A
DA
5
A
N6
DA
5
1_555
B
DT
7
B
O2
DT
7
1_555
hydrog
REVERSED HOOGSTEEN
A
DA
5
A
N7
DA
5
1_555
B
DT
7
B
N3
DT
7
1_555
hydrog
DA-DT PAIR
A
DA
5
A
N6
DA
5
1_555
B
DT
8
B
O4
DT
8
1_555
hydrog
REVERSED HOOGSTEEN
A
DT
7
A
N3
DT
7
1_555
B
DA
5
B
N7
DA
5
1_555
hydrog
REVERSED HOOGSTEEN
A
DT
7
A
O2
DT
7
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
DT-DA PAIR
A
DT
8
A
O4
DT
8
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N3
DC
9
1_555
B
DG
4
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
N4
DC
9
1_555
B
DG
4
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
9
A
O2
DC
9
1_555
B
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
3
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
3
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
3
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
2
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
1
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
1
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
1
B
N4
DC
1
1_555
DNA
T-T mispair, A-T-T triplet, non-helical DNA duplex, DNA
4L25
PDB
1
4L25
1
12
4L25
1
12
4L25
A
1
1
12
1
12
4L25
1
12
4L25
B
1
1
12
4
P 1 21 1